BLASTX nr result
ID: Sinomenium21_contig00037478
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00037478
(307 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007010013.1| Pseudouridine synthase [Theobroma cacao] gi|... 118 1e-24
ref|XP_004157082.1| PREDICTED: LOW QUALITY PROTEIN: tRNA pseudou... 115 5e-24
ref|XP_004145528.1| PREDICTED: tRNA pseudouridine synthase A, mi... 115 5e-24
gb|ADN34131.1| tRNA pseudouridine synthase family protein [Cucum... 115 5e-24
ref|XP_004507720.1| PREDICTED: tRNA pseudouridine synthase A, mi... 115 6e-24
ref|XP_004507719.1| PREDICTED: tRNA pseudouridine synthase A, mi... 115 6e-24
gb|EXB88225.1| tRNA pseudouridine synthase A [Morus notabilis] 115 8e-24
ref|XP_003610360.1| tRNA pseudouridine synthase [Medicago trunca... 115 8e-24
ref|XP_003610354.1| tRNA pseudouridine synthase [Medicago trunca... 115 8e-24
gb|ACJ85562.1| unknown [Medicago truncatula] gi|388491044|gb|AFK... 115 8e-24
ref|XP_003610356.1| tRNA pseudouridine synthase [Medicago trunca... 115 8e-24
ref|XP_006575306.1| PREDICTED: tRNA pseudouridine synthase A, mi... 114 1e-23
ref|XP_002300673.2| hypothetical protein POPTR_0002s01580g [Popu... 114 1e-23
ref|XP_003519139.1| PREDICTED: tRNA pseudouridine synthase A, mi... 114 1e-23
ref|XP_007154901.1| hypothetical protein PHAVU_003G157400g [Phas... 114 2e-23
ref|XP_007154900.1| hypothetical protein PHAVU_003G157400g [Phas... 114 2e-23
ref|XP_006435279.1| hypothetical protein CICLE_v10000838mg [Citr... 114 2e-23
ref|XP_006473737.1| PREDICTED: tRNA pseudouridine synthase A, mi... 112 4e-23
ref|NP_001047686.1| Os02g0668400 [Oryza sativa Japonica Group] g... 112 4e-23
gb|AFW72724.1| hypothetical protein ZEAMMB73_421497 [Zea mays] 112 4e-23
>ref|XP_007010013.1| Pseudouridine synthase [Theobroma cacao]
gi|508726926|gb|EOY18823.1| Pseudouridine synthase
[Theobroma cacao]
Length = 507
Score = 118 bits (295), Expect = 1e-24
Identities = 61/101 (60%), Positives = 70/101 (69%)
Frame = +3
Query: 3 EVVGQSFIFHQIQKMIGLAVAVMRNCTPESVIDVAL*E*VIF*IPNITFLVLLIKQNSNG 182
EVVGQSF+ HQI+KMIG+AVAVMRNC PES+I+ AL +
Sbjct: 347 EVVGQSFMLHQIRKMIGMAVAVMRNCAPESLIETAL--------------------RKDV 386
Query: 183 AIKVPTAPEVGLYLDECLFTSYNQKWKEPSEEISMKAYAEE 305
+I VPTAPEVGLYLDECLF SYNQKWK+ EE+SMKAY EE
Sbjct: 387 SINVPTAPEVGLYLDECLFASYNQKWKDSHEELSMKAYEEE 427
>ref|XP_004157082.1| PREDICTED: LOW QUALITY PROTEIN: tRNA pseudouridine synthase A,
mitochondrial-like [Cucumis sativus]
Length = 519
Score = 115 bits (289), Expect = 5e-24
Identities = 60/100 (60%), Positives = 69/100 (69%)
Frame = +3
Query: 3 EVVGQSFIFHQIQKMIGLAVAVMRNCTPESVIDVAL*E*VIF*IPNITFLVLLIKQNSNG 182
EVVGQSF+ HQI+KM+GLAVA+MRNC PES+I+ AL +
Sbjct: 378 EVVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKAL--------------------QKDV 417
Query: 183 AIKVPTAPEVGLYLDECLFTSYNQKWKEPSEEISMKAYAE 302
I VPTAPEVGLYLDECLFTSYNQKWK+ EE+SMKAY E
Sbjct: 418 NINVPTAPEVGLYLDECLFTSYNQKWKDTHEEVSMKAYEE 457
>ref|XP_004145528.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like
[Cucumis sativus]
Length = 519
Score = 115 bits (289), Expect = 5e-24
Identities = 60/100 (60%), Positives = 69/100 (69%)
Frame = +3
Query: 3 EVVGQSFIFHQIQKMIGLAVAVMRNCTPESVIDVAL*E*VIF*IPNITFLVLLIKQNSNG 182
EVVGQSF+ HQI+KM+GLAVA+MRNC PES+I+ AL +
Sbjct: 378 EVVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKAL--------------------QKDV 417
Query: 183 AIKVPTAPEVGLYLDECLFTSYNQKWKEPSEEISMKAYAE 302
I VPTAPEVGLYLDECLFTSYNQKWK+ EE+SMKAY E
Sbjct: 418 NINVPTAPEVGLYLDECLFTSYNQKWKDTHEEVSMKAYEE 457
>gb|ADN34131.1| tRNA pseudouridine synthase family protein [Cucumis melo subsp.
melo]
Length = 519
Score = 115 bits (289), Expect = 5e-24
Identities = 60/100 (60%), Positives = 69/100 (69%)
Frame = +3
Query: 3 EVVGQSFIFHQIQKMIGLAVAVMRNCTPESVIDVAL*E*VIF*IPNITFLVLLIKQNSNG 182
EVVGQSF+ HQI+KM+GLAVA+MRNC PES+I+ AL +
Sbjct: 378 EVVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKAL--------------------QKDV 417
Query: 183 AIKVPTAPEVGLYLDECLFTSYNQKWKEPSEEISMKAYAE 302
I VPTAPEVGLYLDECLFTSYNQKWK+ EE+SMKAY E
Sbjct: 418 NINVPTAPEVGLYLDECLFTSYNQKWKDTHEEVSMKAYEE 457
>ref|XP_004507720.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like
isoform X2 [Cicer arietinum]
Length = 475
Score = 115 bits (288), Expect = 6e-24
Identities = 58/101 (57%), Positives = 71/101 (70%)
Frame = +3
Query: 3 EVVGQSFIFHQIQKMIGLAVAVMRNCTPESVIDVAL*E*VIF*IPNITFLVLLIKQNSNG 182
E+VGQSF+ HQI+KM+GLAVA+MRNC PES+I+ AL ++
Sbjct: 336 EIVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKAL--------------------QTDV 375
Query: 183 AIKVPTAPEVGLYLDECLFTSYNQKWKEPSEEISMKAYAEE 305
+I VPTAPEVGLYLDEC FTSYNQKWK+ EE+SMKAY +E
Sbjct: 376 SITVPTAPEVGLYLDECFFTSYNQKWKDTHEEVSMKAYEKE 416
>ref|XP_004507719.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like
isoform X1 [Cicer arietinum]
Length = 505
Score = 115 bits (288), Expect = 6e-24
Identities = 58/101 (57%), Positives = 71/101 (70%)
Frame = +3
Query: 3 EVVGQSFIFHQIQKMIGLAVAVMRNCTPESVIDVAL*E*VIF*IPNITFLVLLIKQNSNG 182
E+VGQSF+ HQI+KM+GLAVA+MRNC PES+I+ AL ++
Sbjct: 366 EIVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKAL--------------------QTDV 405
Query: 183 AIKVPTAPEVGLYLDECLFTSYNQKWKEPSEEISMKAYAEE 305
+I VPTAPEVGLYLDEC FTSYNQKWK+ EE+SMKAY +E
Sbjct: 406 SITVPTAPEVGLYLDECFFTSYNQKWKDTHEEVSMKAYEKE 446
>gb|EXB88225.1| tRNA pseudouridine synthase A [Morus notabilis]
Length = 621
Score = 115 bits (287), Expect = 8e-24
Identities = 59/101 (58%), Positives = 71/101 (70%)
Frame = +3
Query: 3 EVVGQSFIFHQIQKMIGLAVAVMRNCTPESVIDVAL*E*VIF*IPNITFLVLLIKQNSNG 182
EVVGQSF+ HQI+KMIGLAVA+MRNC PES+++ AL +
Sbjct: 482 EVVGQSFMLHQIRKMIGLAVAIMRNCVPESLMENAL--------------------QKDV 521
Query: 183 AIKVPTAPEVGLYLDECLFTSYNQKWKEPSEEISMKAYAEE 305
I +PTAPEVGLYLDECLF+SYN+KWK+ EE+SMKAYAEE
Sbjct: 522 NINIPTAPEVGLYLDECLFSSYNKKWKDSHEEMSMKAYAEE 562
>ref|XP_003610360.1| tRNA pseudouridine synthase [Medicago truncatula]
gi|355511415|gb|AES92557.1| tRNA pseudouridine synthase
[Medicago truncatula] gi|388510220|gb|AFK43176.1|
unknown [Medicago truncatula]
Length = 530
Score = 115 bits (287), Expect = 8e-24
Identities = 58/101 (57%), Positives = 70/101 (69%)
Frame = +3
Query: 3 EVVGQSFIFHQIQKMIGLAVAVMRNCTPESVIDVAL*E*VIF*IPNITFLVLLIKQNSNG 182
E+VGQSF+ HQI+KM+GLAVA+MRNC PES+I+ AL +
Sbjct: 382 EIVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKAL--------------------QKDV 421
Query: 183 AIKVPTAPEVGLYLDECLFTSYNQKWKEPSEEISMKAYAEE 305
+I VPTAPEVGLYLDEC FTSYNQKWK+ EE+SMKAY +E
Sbjct: 422 SITVPTAPEVGLYLDECFFTSYNQKWKDTHEEVSMKAYEKE 462
>ref|XP_003610354.1| tRNA pseudouridine synthase [Medicago truncatula]
gi|355511409|gb|AES92551.1| tRNA pseudouridine synthase
[Medicago truncatula]
Length = 361
Score = 115 bits (287), Expect = 8e-24
Identities = 58/101 (57%), Positives = 70/101 (69%)
Frame = +3
Query: 3 EVVGQSFIFHQIQKMIGLAVAVMRNCTPESVIDVAL*E*VIF*IPNITFLVLLIKQNSNG 182
E+VGQSF+ HQI+KM+GLAVA+MRNC PES+I+ AL +
Sbjct: 213 EIVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKAL--------------------QKDV 252
Query: 183 AIKVPTAPEVGLYLDECLFTSYNQKWKEPSEEISMKAYAEE 305
+I VPTAPEVGLYLDEC FTSYNQKWK+ EE+SMKAY +E
Sbjct: 253 SITVPTAPEVGLYLDECFFTSYNQKWKDTHEEVSMKAYEKE 293
>gb|ACJ85562.1| unknown [Medicago truncatula] gi|388491044|gb|AFK33588.1| unknown
[Medicago truncatula]
Length = 530
Score = 115 bits (287), Expect = 8e-24
Identities = 58/101 (57%), Positives = 70/101 (69%)
Frame = +3
Query: 3 EVVGQSFIFHQIQKMIGLAVAVMRNCTPESVIDVAL*E*VIF*IPNITFLVLLIKQNSNG 182
E+VGQSF+ HQI+KM+GLAVA+MRNC PES+I+ AL +
Sbjct: 382 EIVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKAL--------------------QKDV 421
Query: 183 AIKVPTAPEVGLYLDECLFTSYNQKWKEPSEEISMKAYAEE 305
+I VPTAPEVGLYLDEC FTSYNQKWK+ EE+SMKAY +E
Sbjct: 422 SITVPTAPEVGLYLDECFFTSYNQKWKDTHEEVSMKAYEKE 462
>ref|XP_003610356.1| tRNA pseudouridine synthase [Medicago truncatula]
gi|355511411|gb|AES92553.1| tRNA pseudouridine synthase
[Medicago truncatula]
Length = 530
Score = 115 bits (287), Expect = 8e-24
Identities = 58/101 (57%), Positives = 70/101 (69%)
Frame = +3
Query: 3 EVVGQSFIFHQIQKMIGLAVAVMRNCTPESVIDVAL*E*VIF*IPNITFLVLLIKQNSNG 182
E+VGQSF+ HQI+KM+GLAVA+MRNC PES+I+ AL +
Sbjct: 382 EIVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKAL--------------------QKDV 421
Query: 183 AIKVPTAPEVGLYLDECLFTSYNQKWKEPSEEISMKAYAEE 305
+I VPTAPEVGLYLDEC FTSYNQKWK+ EE+SMKAY +E
Sbjct: 422 SITVPTAPEVGLYLDECFFTSYNQKWKDTHEEVSMKAYEKE 462
>ref|XP_006575306.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like
isoform X2 [Glycine max]
Length = 518
Score = 114 bits (285), Expect = 1e-23
Identities = 63/101 (62%), Positives = 72/101 (71%)
Frame = +3
Query: 3 EVVGQSFIFHQIQKMIGLAVAVMRNCTPESVIDVAL*E*VIF*IPNITFLVLLIKQNSNG 182
EVVGQSF+ HQI+KMIGLAVA+MRNC PES+ID AL +Q+ N
Sbjct: 344 EVVGQSFMLHQIRKMIGLAVAIMRNCAPESLIDEAL------------------QQDVN- 384
Query: 183 AIKVPTAPEVGLYLDECLFTSYNQKWKEPSEEISMKAYAEE 305
I VPTAPEVGLYLDEC FTSYNQKWK+ EE+SMKAY +E
Sbjct: 385 -INVPTAPEVGLYLDECFFTSYNQKWKD-HEELSMKAYEKE 423
>ref|XP_002300673.2| hypothetical protein POPTR_0002s01580g [Populus trichocarpa]
gi|550344062|gb|EEE79946.2| hypothetical protein
POPTR_0002s01580g [Populus trichocarpa]
Length = 516
Score = 114 bits (285), Expect = 1e-23
Identities = 60/101 (59%), Positives = 67/101 (66%)
Frame = +3
Query: 3 EVVGQSFIFHQIQKMIGLAVAVMRNCTPESVIDVAL*E*VIF*IPNITFLVLLIKQNSNG 182
EVVGQSF+ HQI+KMIG+AVA+MRNC PES+I AL +
Sbjct: 366 EVVGQSFMLHQIRKMIGVAVAIMRNCAPESLIQTAL--------------------QKDV 405
Query: 183 AIKVPTAPEVGLYLDECLFTSYNQKWKEPSEEISMKAYAEE 305
I VPTAPEVGLYLDEC FTSYNQKWK+ EEISMK Y EE
Sbjct: 406 NINVPTAPEVGLYLDECFFTSYNQKWKDSHEEISMKDYEEE 446
>ref|XP_003519139.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like
isoform X1 [Glycine max]
Length = 548
Score = 114 bits (285), Expect = 1e-23
Identities = 63/101 (62%), Positives = 72/101 (71%)
Frame = +3
Query: 3 EVVGQSFIFHQIQKMIGLAVAVMRNCTPESVIDVAL*E*VIF*IPNITFLVLLIKQNSNG 182
EVVGQSF+ HQI+KMIGLAVA+MRNC PES+ID AL +Q+ N
Sbjct: 374 EVVGQSFMLHQIRKMIGLAVAIMRNCAPESLIDEAL------------------QQDVN- 414
Query: 183 AIKVPTAPEVGLYLDECLFTSYNQKWKEPSEEISMKAYAEE 305
I VPTAPEVGLYLDEC FTSYNQKWK+ EE+SMKAY +E
Sbjct: 415 -INVPTAPEVGLYLDECFFTSYNQKWKD-HEELSMKAYEKE 453
>ref|XP_007154901.1| hypothetical protein PHAVU_003G157400g [Phaseolus vulgaris]
gi|561028255|gb|ESW26895.1| hypothetical protein
PHAVU_003G157400g [Phaseolus vulgaris]
Length = 556
Score = 114 bits (284), Expect = 2e-23
Identities = 60/101 (59%), Positives = 72/101 (71%)
Frame = +3
Query: 3 EVVGQSFIFHQIQKMIGLAVAVMRNCTPESVIDVAL*E*VIF*IPNITFLVLLIKQNSNG 182
EVVGQSF+ HQI+KM+GLAVA+MRNC PES+I+ AL +Q+ N
Sbjct: 356 EVVGQSFMLHQIRKMMGLAVAIMRNCAPESLINKAL------------------QQDVN- 396
Query: 183 AIKVPTAPEVGLYLDECLFTSYNQKWKEPSEEISMKAYAEE 305
I VPTAPEVGLYLDEC F+SYNQKWK+ EE+SMKAY +E
Sbjct: 397 -INVPTAPEVGLYLDECFFSSYNQKWKDSHEELSMKAYEKE 436
>ref|XP_007154900.1| hypothetical protein PHAVU_003G157400g [Phaseolus vulgaris]
gi|593783723|ref|XP_007154902.1| hypothetical protein
PHAVU_003G157400g [Phaseolus vulgaris]
gi|561028254|gb|ESW26894.1| hypothetical protein
PHAVU_003G157400g [Phaseolus vulgaris]
gi|561028256|gb|ESW26896.1| hypothetical protein
PHAVU_003G157400g [Phaseolus vulgaris]
Length = 586
Score = 114 bits (284), Expect = 2e-23
Identities = 60/101 (59%), Positives = 72/101 (71%)
Frame = +3
Query: 3 EVVGQSFIFHQIQKMIGLAVAVMRNCTPESVIDVAL*E*VIF*IPNITFLVLLIKQNSNG 182
EVVGQSF+ HQI+KM+GLAVA+MRNC PES+I+ AL +Q+ N
Sbjct: 386 EVVGQSFMLHQIRKMMGLAVAIMRNCAPESLINKAL------------------QQDVN- 426
Query: 183 AIKVPTAPEVGLYLDECLFTSYNQKWKEPSEEISMKAYAEE 305
I VPTAPEVGLYLDEC F+SYNQKWK+ EE+SMKAY +E
Sbjct: 427 -INVPTAPEVGLYLDECFFSSYNQKWKDSHEELSMKAYEKE 466
>ref|XP_006435279.1| hypothetical protein CICLE_v10000838mg [Citrus clementina]
gi|557537401|gb|ESR48519.1| hypothetical protein
CICLE_v10000838mg [Citrus clementina]
Length = 526
Score = 114 bits (284), Expect = 2e-23
Identities = 59/101 (58%), Positives = 69/101 (68%)
Frame = +3
Query: 3 EVVGQSFIFHQIQKMIGLAVAVMRNCTPESVIDVAL*E*VIF*IPNITFLVLLIKQNSNG 182
EVVGQSF+ HQI+KMIGLAVAV+RNC PES+I+ AL +
Sbjct: 397 EVVGQSFMLHQIRKMIGLAVAVVRNCAPESLIETAL--------------------QKDV 436
Query: 183 AIKVPTAPEVGLYLDECLFTSYNQKWKEPSEEISMKAYAEE 305
I VPTAPEVGLYLDEC+F SYN+KWK+ EE+SMKAY EE
Sbjct: 437 NINVPTAPEVGLYLDECIFASYNKKWKDSHEELSMKAYEEE 477
>ref|XP_006473737.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like
[Citrus sinensis]
Length = 526
Score = 112 bits (281), Expect = 4e-23
Identities = 58/101 (57%), Positives = 69/101 (68%)
Frame = +3
Query: 3 EVVGQSFIFHQIQKMIGLAVAVMRNCTPESVIDVAL*E*VIF*IPNITFLVLLIKQNSNG 182
EVVGQSF+ HQI+KMIGLAVAV+RNC P+S+I+ AL +
Sbjct: 397 EVVGQSFMLHQIRKMIGLAVAVVRNCAPQSLIETAL--------------------QKDV 436
Query: 183 AIKVPTAPEVGLYLDECLFTSYNQKWKEPSEEISMKAYAEE 305
I VPTAPEVGLYLDEC+F SYN+KWK+ EE+SMKAY EE
Sbjct: 437 NINVPTAPEVGLYLDECIFASYNKKWKDSHEELSMKAYEEE 477
>ref|NP_001047686.1| Os02g0668400 [Oryza sativa Japonica Group]
gi|50251324|dbj|BAD28300.1| putative pseudouridine
synthase 1 [Oryza sativa Japonica Group]
gi|50252138|dbj|BAD28134.1| putative pseudouridine
synthase 1 [Oryza sativa Japonica Group]
gi|113537217|dbj|BAF09600.1| Os02g0668400 [Oryza sativa
Japonica Group]
Length = 581
Score = 112 bits (281), Expect = 4e-23
Identities = 58/101 (57%), Positives = 71/101 (70%)
Frame = +3
Query: 3 EVVGQSFIFHQIQKMIGLAVAVMRNCTPESVIDVAL*E*VIF*IPNITFLVLLIKQNSNG 182
EVVGQSF+ HQI+KMIGLAVAVMRNC PES+ DVA +++ N
Sbjct: 432 EVVGQSFMLHQIRKMIGLAVAVMRNCAPESIYDVAF------------------RKDVN- 472
Query: 183 AIKVPTAPEVGLYLDECLFTSYNQKWKEPSEEISMKAYAEE 305
+ VPTAPEVGLYLDEC+FTSYN+KWK+ E +SM+ Y+EE
Sbjct: 473 -LNVPTAPEVGLYLDECMFTSYNKKWKDSHEAVSMEPYSEE 512
>gb|AFW72724.1| hypothetical protein ZEAMMB73_421497 [Zea mays]
Length = 565
Score = 112 bits (281), Expect = 4e-23
Identities = 58/101 (57%), Positives = 71/101 (70%)
Frame = +3
Query: 3 EVVGQSFIFHQIQKMIGLAVAVMRNCTPESVIDVAL*E*VIF*IPNITFLVLLIKQNSNG 182
EVVGQSF+ HQI+KMIGLAVAVMRNC PES+ DVA +++ N
Sbjct: 403 EVVGQSFMLHQIRKMIGLAVAVMRNCAPESIYDVAF------------------RKDVN- 443
Query: 183 AIKVPTAPEVGLYLDECLFTSYNQKWKEPSEEISMKAYAEE 305
+ VPTAPEVGLYLDEC+FTSYN+KWK+ E +SM+ Y+EE
Sbjct: 444 -LNVPTAPEVGLYLDECMFTSYNKKWKDSHEAVSMEPYSEE 483