BLASTX nr result

ID: Sinomenium21_contig00037337 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00037337
         (381 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI33123.3| unnamed protein product [Vitis vinifera]               59   7e-07
ref|XP_002322538.2| transcription initiation factor IIF alpha su...    59   9e-07
ref|XP_006380878.1| hypothetical protein POPTR_0006s01070g [Popu...    58   1e-06
ref|XP_002308775.1| transcription initiation factor IIF alpha su...    58   1e-06
ref|XP_007154011.1| hypothetical protein PHAVU_003G083500g [Phas...    57   2e-06
ref|XP_004293352.1| PREDICTED: transcription initiation factor I...    56   5e-06

>emb|CBI33123.3| unnamed protein product [Vitis vinifera]
          Length = 539

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 25/28 (89%), Positives = 25/28 (89%)
 Frame = -2

Query: 86 MSFDLHLKPSCGGCGSPTDLYGSNCKHM 3
          MSFDL LKPSC GCGS TDLYGSNCKHM
Sbjct: 1  MSFDLMLKPSCSGCGSTTDLYGSNCKHM 28


>ref|XP_002322538.2| transcription initiation factor IIF alpha subunit family protein
          [Populus trichocarpa] gi|550320589|gb|EEF04299.2|
          transcription initiation factor IIF alpha subunit
          family protein [Populus trichocarpa]
          Length = 540

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 25/28 (89%), Positives = 25/28 (89%)
 Frame = -2

Query: 86 MSFDLHLKPSCGGCGSPTDLYGSNCKHM 3
          MSFDL LKPSC GCGS TDLYGSNCKHM
Sbjct: 1  MSFDLLLKPSCSGCGSTTDLYGSNCKHM 28


>ref|XP_006380878.1| hypothetical protein POPTR_0006s01070g [Populus trichocarpa]
          gi|550335193|gb|ERP58675.1| hypothetical protein
          POPTR_0006s01070g [Populus trichocarpa]
          Length = 536

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 24/28 (85%), Positives = 25/28 (89%)
 Frame = -2

Query: 86 MSFDLHLKPSCGGCGSPTDLYGSNCKHM 3
          MSFDL L+PSC GCGS TDLYGSNCKHM
Sbjct: 1  MSFDLQLQPSCSGCGSTTDLYGSNCKHM 28


>ref|XP_002308775.1| transcription initiation factor IIF alpha subunit family protein
          [Populus trichocarpa] gi|222854751|gb|EEE92298.1|
          transcription initiation factor IIF alpha subunit
          family protein [Populus trichocarpa]
          Length = 541

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 24/28 (85%), Positives = 25/28 (89%)
 Frame = -2

Query: 86 MSFDLHLKPSCGGCGSPTDLYGSNCKHM 3
          MSFDL L+PSC GCGS TDLYGSNCKHM
Sbjct: 1  MSFDLQLQPSCSGCGSTTDLYGSNCKHM 28


>ref|XP_007154011.1| hypothetical protein PHAVU_003G083500g [Phaseolus vulgaris]
          gi|561027365|gb|ESW26005.1| hypothetical protein
          PHAVU_003G083500g [Phaseolus vulgaris]
          Length = 540

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 24/28 (85%), Positives = 25/28 (89%)
 Frame = -2

Query: 86 MSFDLHLKPSCGGCGSPTDLYGSNCKHM 3
          MS DL LKP+CGGCGS TDLYGSNCKHM
Sbjct: 1  MSIDLLLKPTCGGCGSTTDLYGSNCKHM 28


>ref|XP_004293352.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
          [Fragaria vesca subsp. vesca]
          Length = 550

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 24/28 (85%), Positives = 25/28 (89%)
 Frame = -2

Query: 86 MSFDLHLKPSCGGCGSPTDLYGSNCKHM 3
          MS DL LKPSCGGCGS +DLYGSNCKHM
Sbjct: 1  MSSDLLLKPSCGGCGSTSDLYGSNCKHM 28


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