BLASTX nr result
ID: Sinomenium21_contig00037005
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00037005
(290 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAD23376.1| putative phage-type RNA polymerase [Oryza sativa... 132 4e-29
ref|NP_001062659.1| Os09g0246200 [Oryza sativa Japonica Group] g... 132 4e-29
gb|EEE69251.1| hypothetical protein OsJ_28503 [Oryza sativa Japo... 132 4e-29
ref|XP_004956403.1| PREDICTED: DNA-directed RNA polymerase 1B, m... 130 2e-28
ref|XP_007032921.1| DNA/RNA polymerases superfamily protein [The... 125 8e-27
ref|XP_003577161.1| PREDICTED: DNA-directed RNA polymerase 2, ch... 124 2e-26
gb|EMT11393.1| DNA-directed RNA polymerase 2, chloroplastic/mito... 123 2e-26
gb|EMS47556.1| DNA-directed RNA polymerase 2, chloroplastic/mito... 123 2e-26
gb|AAF32492.1|AF091838_1 single-subunit RNA polymerase G [Tritic... 123 2e-26
emb|CBI27412.3| unnamed protein product [Vitis vinifera] 122 7e-26
ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mi... 122 7e-26
ref|XP_006482458.1| PREDICTED: DNA-directed RNA polymerase 2, ch... 121 1e-25
ref|XP_006430989.1| hypothetical protein CICLE_v10010966mg [Citr... 121 1e-25
ref|XP_006430988.1| hypothetical protein CICLE_v10010966mg [Citr... 121 1e-25
ref|XP_006430987.1| hypothetical protein CICLE_v10010966mg [Citr... 121 1e-25
ref|XP_002461035.1| hypothetical protein SORBIDRAFT_02g039520 [S... 120 1e-25
ref|NP_001104931.1| RNA polymerase T phage-like 1 [Zea mays] gi|... 120 2e-25
ref|XP_006660444.1| PREDICTED: DNA-directed RNA polymerase 1B, m... 120 3e-25
ref|XP_006660443.1| PREDICTED: DNA-directed RNA polymerase 1B, m... 120 3e-25
tpg|DAA63638.1| TPA: RNA polymerase T phage-like 1 [Zea mays] 120 3e-25
>dbj|BAD23376.1| putative phage-type RNA polymerase [Oryza sativa Japonica Group]
gi|48716846|dbj|BAD23544.1| putative phage-type RNA
polymerase [Oryza sativa Japonica Group]
gi|215694941|dbj|BAG90132.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 951
Score = 132 bits (333), Expect = 4e-29
Identities = 66/97 (68%), Positives = 80/97 (82%), Gaps = 1/97 (1%)
Frame = +1
Query: 1 GRVRVIQASCQIGEAIEQEARIHKFLEKTKKNTKRSEINEGSGLDAD-AKENKKIRKKVT 177
G VRVIQA+CQIGEAIE E RIHKFLEKTKK + + NE G D+D AKE +++RKKVT
Sbjct: 280 GSVRVIQAACQIGEAIEHEVRIHKFLEKTKKKSNKEMDNEEEGGDSDIAKEQERLRKKVT 339
Query: 178 DLMKKQKLQQVRQIVKRQEDSKPWGQDARIKVGTHLL 288
DLMKKQK++QVR IVK+Q++SKPWGQDA KVG+ L+
Sbjct: 340 DLMKKQKIRQVRNIVKKQDNSKPWGQDAHAKVGSRLI 376
>ref|NP_001062659.1| Os09g0246200 [Oryza sativa Japonica Group]
gi|30698494|dbj|BAC76604.1| RpoT1 [Oryza sativa Japonica
Group] gi|37360973|dbj|BAC98395.1| T7 bacteriophage-type
single subunit RNA polymerase [Oryza sativa Japonica
Group] gi|113630892|dbj|BAF24573.1| Os09g0246200 [Oryza
sativa Japonica Group]
Length = 1017
Score = 132 bits (333), Expect = 4e-29
Identities = 66/97 (68%), Positives = 80/97 (82%), Gaps = 1/97 (1%)
Frame = +1
Query: 1 GRVRVIQASCQIGEAIEQEARIHKFLEKTKKNTKRSEINEGSGLDAD-AKENKKIRKKVT 177
G VRVIQA+CQIGEAIE E RIHKFLEKTKK + + NE G D+D AKE +++RKKVT
Sbjct: 280 GSVRVIQAACQIGEAIEHEVRIHKFLEKTKKKSNKEMDNEEEGGDSDIAKEQERLRKKVT 339
Query: 178 DLMKKQKLQQVRQIVKRQEDSKPWGQDARIKVGTHLL 288
DLMKKQK++QVR IVK+Q++SKPWGQDA KVG+ L+
Sbjct: 340 DLMKKQKIRQVRNIVKKQDNSKPWGQDAHAKVGSRLI 376
>gb|EEE69251.1| hypothetical protein OsJ_28503 [Oryza sativa Japonica Group]
Length = 983
Score = 132 bits (333), Expect = 4e-29
Identities = 66/97 (68%), Positives = 80/97 (82%), Gaps = 1/97 (1%)
Frame = +1
Query: 1 GRVRVIQASCQIGEAIEQEARIHKFLEKTKKNTKRSEINEGSGLDAD-AKENKKIRKKVT 177
G VRVIQA+CQIGEAIE E RIHKFLEKTKK + + NE G D+D AKE +++RKKVT
Sbjct: 246 GSVRVIQAACQIGEAIEHEVRIHKFLEKTKKKSNKEMDNEEEGGDSDIAKEQERLRKKVT 305
Query: 178 DLMKKQKLQQVRQIVKRQEDSKPWGQDARIKVGTHLL 288
DLMKKQK++QVR IVK+Q++SKPWGQDA KVG+ L+
Sbjct: 306 DLMKKQKIRQVRNIVKKQDNSKPWGQDAHAKVGSRLI 342
>ref|XP_004956403.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like
[Setaria italica]
Length = 1005
Score = 130 bits (327), Expect = 2e-28
Identities = 64/97 (65%), Positives = 80/97 (82%), Gaps = 1/97 (1%)
Frame = +1
Query: 1 GRVRVIQASCQIGEAIEQEARIHKFLEKTKKNTKRSEINEGSGLDAD-AKENKKIRKKVT 177
G VRVIQA+CQIGEAIE E RIH+FLEKT+K + + + NE D+D AKE +++RKKVT
Sbjct: 268 GSVRVIQAACQIGEAIEHEVRIHRFLEKTRKKSNKEKENEEEIFDSDIAKEQQRLRKKVT 327
Query: 178 DLMKKQKLQQVRQIVKRQEDSKPWGQDARIKVGTHLL 288
DLMKKQKL+QVR+IVK Q+DS+PWGQDA KVG+ L+
Sbjct: 328 DLMKKQKLRQVRKIVKNQDDSRPWGQDAHAKVGSRLI 364
>ref|XP_007032921.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
gi|508711950|gb|EOY03847.1| DNA/RNA polymerases
superfamily protein [Theobroma cacao]
Length = 1100
Score = 125 bits (313), Expect = 8e-27
Identities = 64/98 (65%), Positives = 80/98 (81%), Gaps = 2/98 (2%)
Frame = +1
Query: 1 GRVRVIQASCQIGEAIEQEARIHKFLEKTKKNT--KRSEINEGSGLDADAKENKKIRKKV 174
G RV+QA+C IG+AIEQE RIHKFLEKTKK K++E +EG +A+ KE +K+RKKV
Sbjct: 295 GCARVVQAACLIGDAIEQEVRIHKFLEKTKKKRVDKKNE-DEGDKPNAEIKEQEKLRKKV 353
Query: 175 TDLMKKQKLQQVRQIVKRQEDSKPWGQDARIKVGTHLL 288
TDL+KKQKL VRQIVK Q+D+KPWGQDA+ KVG+HL+
Sbjct: 354 TDLIKKQKLPAVRQIVKGQDDTKPWGQDAKAKVGSHLI 391
>ref|XP_003577161.1| PREDICTED: DNA-directed RNA polymerase 2,
chloroplastic/mitochondrial-like [Brachypodium
distachyon]
Length = 992
Score = 124 bits (310), Expect = 2e-26
Identities = 62/97 (63%), Positives = 76/97 (78%), Gaps = 1/97 (1%)
Frame = +1
Query: 1 GRVRVIQASCQIGEAIEQEARIHKFLEKTKKNTKRSEINEGSGLDAD-AKENKKIRKKVT 177
G VRVIQA+CQIGEAIE E RIHKFLEKTKK + N D+D AKE +++RKKVT
Sbjct: 255 GSVRVIQAACQIGEAIEHEVRIHKFLEKTKKKNTKEVDNVVEAGDSDIAKEQQRLRKKVT 314
Query: 178 DLMKKQKLQQVRQIVKRQEDSKPWGQDARIKVGTHLL 288
DLMKKQK++QVR IVK+Q+ ++PWGQDA KVG+ L+
Sbjct: 315 DLMKKQKIRQVRNIVKKQDSTRPWGQDAHAKVGSRLI 351
>gb|EMT11393.1| DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
[Aegilops tauschii]
Length = 884
Score = 123 bits (309), Expect = 2e-26
Identities = 60/97 (61%), Positives = 76/97 (78%), Gaps = 1/97 (1%)
Frame = +1
Query: 1 GRVRVIQASCQIGEAIEQEARIHKFLEKTKKNTKRSEINEGSGLDAD-AKENKKIRKKVT 177
G VRVIQA+CQIGEA+E E RIHKFLEKTKK + +DAD AKE +++RKKVT
Sbjct: 194 GSVRVIQAACQIGEAVEHEVRIHKFLEKTKKKNTKEVDKVVEAVDADIAKEQERLRKKVT 253
Query: 178 DLMKKQKLQQVRQIVKRQEDSKPWGQDARIKVGTHLL 288
DLMKKQK++QVR +VK+Q+ ++PWGQDA KVG+ L+
Sbjct: 254 DLMKKQKIRQVRHLVKKQDSTRPWGQDAHAKVGSRLI 290
>gb|EMS47556.1| DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
[Triticum urartu]
Length = 854
Score = 123 bits (309), Expect = 2e-26
Identities = 60/97 (61%), Positives = 76/97 (78%), Gaps = 1/97 (1%)
Frame = +1
Query: 1 GRVRVIQASCQIGEAIEQEARIHKFLEKTKKNTKRSEINEGSGLDAD-AKENKKIRKKVT 177
G VRVIQA+CQIGEA+E E RIHKFLEKTKK + +DAD AKE +++RKKVT
Sbjct: 145 GSVRVIQAACQIGEAVEHEVRIHKFLEKTKKKNTKEVDKVVEAVDADIAKEQERLRKKVT 204
Query: 178 DLMKKQKLQQVRQIVKRQEDSKPWGQDARIKVGTHLL 288
DLMKKQK++QVR +VK+Q+ ++PWGQDA KVG+ L+
Sbjct: 205 DLMKKQKIRQVRHLVKKQDSTRPWGQDAHAKVGSRLI 241
>gb|AAF32492.1|AF091838_1 single-subunit RNA polymerase G [Triticum aestivum]
Length = 1005
Score = 123 bits (309), Expect = 2e-26
Identities = 60/97 (61%), Positives = 76/97 (78%), Gaps = 1/97 (1%)
Frame = +1
Query: 1 GRVRVIQASCQIGEAIEQEARIHKFLEKTKKNTKRSEINEGSGLDAD-AKENKKIRKKVT 177
G VRVIQA+CQIGEA+E E RIHKFLEKTKK + +DAD AKE +++RKKVT
Sbjct: 269 GSVRVIQAACQIGEAVEHEVRIHKFLEKTKKKNTKEVDKVVEAVDADIAKEQERLRKKVT 328
Query: 178 DLMKKQKLQQVRQIVKRQEDSKPWGQDARIKVGTHLL 288
DLMKKQK++QVR +VK+Q+ ++PWGQDA KVG+ L+
Sbjct: 329 DLMKKQKIRQVRHLVKKQDSTRPWGQDAHAKVGSRLI 365
>emb|CBI27412.3| unnamed protein product [Vitis vinifera]
Length = 810
Score = 122 bits (305), Expect = 7e-26
Identities = 61/96 (63%), Positives = 74/96 (77%)
Frame = +1
Query: 1 GRVRVIQASCQIGEAIEQEARIHKFLEKTKKNTKRSEINEGSGLDADAKENKKIRKKVTD 180
G RV+QA+C IGEAIE E RI +F+EKTKK + S N G + KE +K+RKKV+
Sbjct: 75 GSARVVQAACHIGEAIEHEVRIQRFMEKTKKKSASSN-NPDGGSNPVTKEQEKLRKKVSM 133
Query: 181 LMKKQKLQQVRQIVKRQEDSKPWGQDARIKVGTHLL 288
LMKKQKLQQVRQIVKRQ+DSKPWGQDA +KVG+ L+
Sbjct: 134 LMKKQKLQQVRQIVKRQDDSKPWGQDANVKVGSRLI 169
>ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial [Vitis
vinifera]
Length = 978
Score = 122 bits (305), Expect = 7e-26
Identities = 61/96 (63%), Positives = 74/96 (77%)
Frame = +1
Query: 1 GRVRVIQASCQIGEAIEQEARIHKFLEKTKKNTKRSEINEGSGLDADAKENKKIRKKVTD 180
G RV+QA+C IGEAIE E RI +F+EKTKK + S N G + KE +K+RKKV+
Sbjct: 243 GSARVVQAACHIGEAIEHEVRIQRFMEKTKKKSASSN-NPDGGSNPVTKEQEKLRKKVSM 301
Query: 181 LMKKQKLQQVRQIVKRQEDSKPWGQDARIKVGTHLL 288
LMKKQKLQQVRQIVKRQ+DSKPWGQDA +KVG+ L+
Sbjct: 302 LMKKQKLQQVRQIVKRQDDSKPWGQDANVKVGSRLI 337
>ref|XP_006482458.1| PREDICTED: DNA-directed RNA polymerase 2,
chloroplastic/mitochondrial-like [Citrus sinensis]
Length = 1026
Score = 121 bits (303), Expect = 1e-25
Identities = 62/98 (63%), Positives = 74/98 (75%), Gaps = 2/98 (2%)
Frame = +1
Query: 1 GRVRVIQASCQIGEAIEQEARIHKFLEKTKKN--TKRSEINEGSGLDADAKENKKIRKKV 174
GR RV+QA+C IG+AIEQE RIHKFLEKTKK TK E EG + E +K+RKKV
Sbjct: 288 GRARVVQAACIIGDAIEQEVRIHKFLEKTKKKNETKNKEDEEGDESNTVTTEQEKLRKKV 347
Query: 175 TDLMKKQKLQQVRQIVKRQEDSKPWGQDARIKVGTHLL 288
TDL+KKQKL VR+IVK Q+D KPWGQDAR KVG+ ++
Sbjct: 348 TDLIKKQKLPAVRRIVKGQDDFKPWGQDARAKVGSRVI 385
>ref|XP_006430989.1| hypothetical protein CICLE_v10010966mg [Citrus clementina]
gi|557533046|gb|ESR44229.1| hypothetical protein
CICLE_v10010966mg [Citrus clementina]
Length = 928
Score = 121 bits (303), Expect = 1e-25
Identities = 62/98 (63%), Positives = 74/98 (75%), Gaps = 2/98 (2%)
Frame = +1
Query: 1 GRVRVIQASCQIGEAIEQEARIHKFLEKTKKN--TKRSEINEGSGLDADAKENKKIRKKV 174
GR RV+QA+C IG+AIEQE RIHKFLEKTKK TK E EG + E +K+RKKV
Sbjct: 292 GRARVVQAACIIGDAIEQEVRIHKFLEKTKKKNETKNKEDEEGDESNTVTTEQEKLRKKV 351
Query: 175 TDLMKKQKLQQVRQIVKRQEDSKPWGQDARIKVGTHLL 288
TDL+KKQKL VR+IVK Q+D KPWGQDAR KVG+ ++
Sbjct: 352 TDLIKKQKLPAVRRIVKGQDDFKPWGQDARAKVGSRVI 389
>ref|XP_006430988.1| hypothetical protein CICLE_v10010966mg [Citrus clementina]
gi|557533045|gb|ESR44228.1| hypothetical protein
CICLE_v10010966mg [Citrus clementina]
Length = 1030
Score = 121 bits (303), Expect = 1e-25
Identities = 62/98 (63%), Positives = 74/98 (75%), Gaps = 2/98 (2%)
Frame = +1
Query: 1 GRVRVIQASCQIGEAIEQEARIHKFLEKTKKN--TKRSEINEGSGLDADAKENKKIRKKV 174
GR RV+QA+C IG+AIEQE RIHKFLEKTKK TK E EG + E +K+RKKV
Sbjct: 292 GRARVVQAACIIGDAIEQEVRIHKFLEKTKKKNETKNKEDEEGDESNTVTTEQEKLRKKV 351
Query: 175 TDLMKKQKLQQVRQIVKRQEDSKPWGQDARIKVGTHLL 288
TDL+KKQKL VR+IVK Q+D KPWGQDAR KVG+ ++
Sbjct: 352 TDLIKKQKLPAVRRIVKGQDDFKPWGQDARAKVGSRVI 389
>ref|XP_006430987.1| hypothetical protein CICLE_v10010966mg [Citrus clementina]
gi|557533044|gb|ESR44227.1| hypothetical protein
CICLE_v10010966mg [Citrus clementina]
Length = 933
Score = 121 bits (303), Expect = 1e-25
Identities = 62/98 (63%), Positives = 74/98 (75%), Gaps = 2/98 (2%)
Frame = +1
Query: 1 GRVRVIQASCQIGEAIEQEARIHKFLEKTKKN--TKRSEINEGSGLDADAKENKKIRKKV 174
GR RV+QA+C IG+AIEQE RIHKFLEKTKK TK E EG + E +K+RKKV
Sbjct: 292 GRARVVQAACIIGDAIEQEVRIHKFLEKTKKKNETKNKEDEEGDESNTVTTEQEKLRKKV 351
Query: 175 TDLMKKQKLQQVRQIVKRQEDSKPWGQDARIKVGTHLL 288
TDL+KKQKL VR+IVK Q+D KPWGQDAR KVG+ ++
Sbjct: 352 TDLIKKQKLPAVRRIVKGQDDFKPWGQDARAKVGSRVI 389
>ref|XP_002461035.1| hypothetical protein SORBIDRAFT_02g039520 [Sorghum bicolor]
gi|241924412|gb|EER97556.1| hypothetical protein
SORBIDRAFT_02g039520 [Sorghum bicolor]
Length = 976
Score = 120 bits (302), Expect = 1e-25
Identities = 63/98 (64%), Positives = 78/98 (79%), Gaps = 2/98 (2%)
Frame = +1
Query: 1 GRVRVIQASCQIGEAIEQEARIHKFLEKT-KKNTKRSEINEGSGLDAD-AKENKKIRKKV 174
G VRVIQA+CQIGEAIE E RI++FLEKT KK+ K E E + D D AKE +++RKKV
Sbjct: 238 GSVRVIQAACQIGEAIEHEVRINRFLEKTRKKSNKEMEKEEEAAGDTDIAKEQQRLRKKV 297
Query: 175 TDLMKKQKLQQVRQIVKRQEDSKPWGQDARIKVGTHLL 288
TDLMKKQKL+QVR IVK Q++S+PWGQD + KVG+ L+
Sbjct: 298 TDLMKKQKLRQVRNIVKNQDNSRPWGQDVQAKVGSRLI 335
>ref|NP_001104931.1| RNA polymerase T phage-like 1 [Zea mays]
gi|4559304|gb|AAD22976.1|AF127021_1 T7-like RNA
polymerase [Zea mays]
Length = 975
Score = 120 bits (301), Expect = 2e-25
Identities = 63/97 (64%), Positives = 75/97 (77%), Gaps = 1/97 (1%)
Frame = +1
Query: 1 GRVRVIQASCQIGEAIEQEARIHKFLEKT-KKNTKRSEINEGSGLDADAKENKKIRKKVT 177
G VRVIQA+CQIGEAIE E RI++FLEKT KKN K E E +G A E +++RKKVT
Sbjct: 238 GSVRVIQAACQIGEAIEHEVRINRFLEKTRKKNNKEMENEEEAGDTNIAVEQQRLRKKVT 297
Query: 178 DLMKKQKLQQVRQIVKRQEDSKPWGQDARIKVGTHLL 288
DLMKKQKL+QVR IVK Q+ S+PWGQDA KVG+ L+
Sbjct: 298 DLMKKQKLRQVRNIVKNQDKSRPWGQDAHAKVGSRLI 334
>ref|XP_006660444.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like
isoform X2 [Oryza brachyantha]
Length = 839
Score = 120 bits (300), Expect = 3e-25
Identities = 61/97 (62%), Positives = 73/97 (75%), Gaps = 1/97 (1%)
Frame = +1
Query: 1 GRVRVIQASCQIGEAIEQEARIHKFLEKTKKNTKRSEINEGS-GLDADAKENKKIRKKVT 177
G VRVIQA+CQIGEAIE E R+HKFLEK KK + NE G AKE +++RKKVT
Sbjct: 102 GSVRVIQAACQIGEAIEHEVRLHKFLEKPKKKRSKEMDNEEEVGCSDIAKEQERLRKKVT 161
Query: 178 DLMKKQKLQQVRQIVKRQEDSKPWGQDARIKVGTHLL 288
DLMKK KL+QVR IVK+Q++SKPWGQD KVG+ L+
Sbjct: 162 DLMKKHKLRQVRYIVKKQDNSKPWGQDVHAKVGSRLI 198
>ref|XP_006660443.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like
isoform X1 [Oryza brachyantha]
Length = 703
Score = 120 bits (300), Expect = 3e-25
Identities = 61/97 (62%), Positives = 73/97 (75%), Gaps = 1/97 (1%)
Frame = +1
Query: 1 GRVRVIQASCQIGEAIEQEARIHKFLEKTKKNTKRSEINEGS-GLDADAKENKKIRKKVT 177
G VRVIQA+CQIGEAIE E R+HKFLEK KK + NE G AKE +++RKKVT
Sbjct: 75 GSVRVIQAACQIGEAIEHEVRLHKFLEKPKKKRSKEMDNEEEVGCSDIAKEQERLRKKVT 134
Query: 178 DLMKKQKLQQVRQIVKRQEDSKPWGQDARIKVGTHLL 288
DLMKK KL+QVR IVK+Q++SKPWGQD KVG+ L+
Sbjct: 135 DLMKKHKLRQVRYIVKKQDNSKPWGQDVHAKVGSRLI 171
>tpg|DAA63638.1| TPA: RNA polymerase T phage-like 1 [Zea mays]
Length = 975
Score = 120 bits (300), Expect = 3e-25
Identities = 63/97 (64%), Positives = 75/97 (77%), Gaps = 1/97 (1%)
Frame = +1
Query: 1 GRVRVIQASCQIGEAIEQEARIHKFLEKT-KKNTKRSEINEGSGLDADAKENKKIRKKVT 177
G VRVIQA+CQIGEAIE E RI++FLEKT KKN K E E +G A E +++RKKVT
Sbjct: 238 GSVRVIQAACQIGEAIEHEVRINRFLEKTRKKNNKEMENEEEAGDTNIAIEQQRLRKKVT 297
Query: 178 DLMKKQKLQQVRQIVKRQEDSKPWGQDARIKVGTHLL 288
DLMKKQKL+QVR IVK Q+ S+PWGQDA KVG+ L+
Sbjct: 298 DLMKKQKLRQVRNIVKNQDKSRPWGQDAHAKVGSRLI 334