BLASTX nr result
ID: Sinomenium21_contig00036787
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00036787
(392 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containi... 86 1e-33
emb|CBI38165.3| unnamed protein product [Vitis vinifera] 86 1e-33
ref|XP_007204096.1| hypothetical protein PRUPE_ppa002338mg [Prun... 84 5e-32
ref|XP_002517667.1| pentatricopeptide repeat-containing protein,... 87 1e-31
ref|XP_007044258.1| Pentatricopeptide repeat (PPR) superfamily p... 84 2e-31
gb|EXC23679.1| hypothetical protein L484_015589 [Morus notabilis] 79 2e-30
ref|XP_006432168.1| hypothetical protein CICLE_v10000448mg [Citr... 78 3e-30
ref|XP_004502949.1| PREDICTED: pentatricopeptide repeat-containi... 81 7e-30
ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containi... 81 7e-30
ref|XP_002883803.1| pentatricopeptide repeat-containing protein ... 86 7e-30
ref|XP_007137795.1| hypothetical protein PHAVU_009G156000g [Phas... 80 2e-29
ref|NP_178983.1| pentatricopeptide repeat-containing protein [Ar... 80 4e-29
ref|XP_006297108.1| hypothetical protein CARUB_v10013108mg [Caps... 83 6e-29
ref|XP_006297107.1| hypothetical protein CARUB_v10013108mg [Caps... 83 6e-29
ref|XP_004237174.1| PREDICTED: pentatricopeptide repeat-containi... 84 2e-28
ref|XP_003602631.1| Pentatricopeptide repeat-containing protein ... 79 2e-28
ref|XP_002310520.1| pentatricopeptide repeat-containing family p... 85 3e-28
ref|XP_006359274.1| PREDICTED: pentatricopeptide repeat-containi... 81 8e-28
ref|XP_006409682.1| hypothetical protein EUTSA_v10022582mg [Eutr... 75 2e-27
ref|XP_006652312.1| PREDICTED: pentatricopeptide repeat-containi... 75 2e-26
>ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
[Vitis vinifera]
Length = 684
Score = 86.3 bits (212), Expect(2) = 1e-33
Identities = 42/63 (66%), Positives = 52/63 (82%)
Frame = -1
Query: 224 KPDEITLASVVSVCATSTAIKEGSQIHACVIKSDKLRDDLVLSYALVDMHAKSCKIKEAK 45
+PDE+TLASVVS CA+ A+KEG QIHA V+K++K RDDLVL ALVDM+AK K+ EA+
Sbjct: 245 EPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEAR 304
Query: 44 RVF 36
RVF
Sbjct: 305 RVF 307
Score = 82.8 bits (203), Expect(2) = 1e-33
Identities = 40/55 (72%), Positives = 47/55 (85%)
Frame = -3
Query: 390 ALIGMYYKCGSVLDAEKMFDGMNERNIVT*NSLISCFEQNGPASKALELFTRMMD 226
ALI MY KCGSV AE++F GM ERN+VT NSLI+C+EQNGPAS+ALE+F RMMD
Sbjct: 187 ALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMD 241
Score = 43.9 bits (102), Expect(2) = 3e-08
Identities = 24/52 (46%), Positives = 31/52 (59%)
Frame = -3
Query: 387 LIGMYYKCGSVLDAEKMFDGMNERNIVT*NSLISCFEQNGPASKALELFTRM 232
LI +Y KC + DA K+FD M +RN T NSLIS ++G +A LF M
Sbjct: 56 LIDVYGKCDCLDDARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSM 107
Score = 39.3 bits (90), Expect(2) = 3e-08
Identities = 21/61 (34%), Positives = 35/61 (57%)
Frame = -1
Query: 218 DEITLASVVSVCATSTAIKEGSQIHACVIKSDKLRDDLVLSYALVDMHAKSCKIKEAKRV 39
+E + S +S CA + G+Q+HA V KS + D+ + AL+DM++K + A+ V
Sbjct: 146 NEYSFGSALSACAGLMDLNMGTQVHALVSKS-RYSTDVYMGSALIDMYSKCGSVACAEEV 204
Query: 38 F 36
F
Sbjct: 205 F 205
Score = 53.1 bits (126), Expect(2) = 1e-06
Identities = 23/54 (42%), Positives = 39/54 (72%)
Frame = -3
Query: 390 ALIGMYYKCGSVLDAEKMFDGMNERNIVT*NSLISCFEQNGPASKALELFTRMM 229
+LI MY KCGS+ D ++F+ M ER+ V+ N++I + QNG ++AL++F +M+
Sbjct: 427 SLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKML 480
Score = 24.6 bits (52), Expect(2) = 1e-06
Identities = 8/23 (34%), Positives = 15/23 (65%)
Frame = -1
Query: 224 KPDEITLASVVSVCATSTAIKEG 156
KPD +T+ V+ C+ + ++EG
Sbjct: 485 KPDHVTMIGVLCACSHAGLVEEG 507
>emb|CBI38165.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 86.3 bits (212), Expect(2) = 1e-33
Identities = 42/63 (66%), Positives = 52/63 (82%)
Frame = -1
Query: 224 KPDEITLASVVSVCATSTAIKEGSQIHACVIKSDKLRDDLVLSYALVDMHAKSCKIKEAK 45
+PDE+TLASVVS CA+ A+KEG QIHA V+K++K RDDLVL ALVDM+AK K+ EA+
Sbjct: 245 EPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEAR 304
Query: 44 RVF 36
RVF
Sbjct: 305 RVF 307
Score = 82.8 bits (203), Expect(2) = 1e-33
Identities = 40/55 (72%), Positives = 47/55 (85%)
Frame = -3
Query: 390 ALIGMYYKCGSVLDAEKMFDGMNERNIVT*NSLISCFEQNGPASKALELFTRMMD 226
ALI MY KCGSV AE++F GM ERN+VT NSLI+C+EQNGPAS+ALE+F RMMD
Sbjct: 187 ALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMD 241
Score = 43.9 bits (102), Expect(2) = 3e-08
Identities = 24/52 (46%), Positives = 31/52 (59%)
Frame = -3
Query: 387 LIGMYYKCGSVLDAEKMFDGMNERNIVT*NSLISCFEQNGPASKALELFTRM 232
LI +Y KC + DA K+FD M +RN T NSLIS ++G +A LF M
Sbjct: 56 LIDVYGKCDCLDDARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSM 107
Score = 39.3 bits (90), Expect(2) = 3e-08
Identities = 21/61 (34%), Positives = 35/61 (57%)
Frame = -1
Query: 218 DEITLASVVSVCATSTAIKEGSQIHACVIKSDKLRDDLVLSYALVDMHAKSCKIKEAKRV 39
+E + S +S CA + G+Q+HA V KS + D+ + AL+DM++K + A+ V
Sbjct: 146 NEYSFGSALSACAGLMDLNMGTQVHALVSKS-RYSTDVYMGSALIDMYSKCGSVACAEEV 204
Query: 38 F 36
F
Sbjct: 205 F 205
Score = 53.1 bits (126), Expect(2) = 1e-06
Identities = 23/54 (42%), Positives = 39/54 (72%)
Frame = -3
Query: 390 ALIGMYYKCGSVLDAEKMFDGMNERNIVT*NSLISCFEQNGPASKALELFTRMM 229
+LI MY KCGS+ D ++F+ M ER+ V+ N++I + QNG ++AL++F +M+
Sbjct: 397 SLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKML 450
Score = 24.6 bits (52), Expect(2) = 1e-06
Identities = 8/23 (34%), Positives = 15/23 (65%)
Frame = -1
Query: 224 KPDEITLASVVSVCATSTAIKEG 156
KPD +T+ V+ C+ + ++EG
Sbjct: 455 KPDHVTMIGVLCACSHAGLVEEG 477
>ref|XP_007204096.1| hypothetical protein PRUPE_ppa002338mg [Prunus persica]
gi|462399627|gb|EMJ05295.1| hypothetical protein
PRUPE_ppa002338mg [Prunus persica]
Length = 685
Score = 83.6 bits (205), Expect(2) = 5e-32
Identities = 42/63 (66%), Positives = 52/63 (82%)
Frame = -1
Query: 224 KPDEITLASVVSVCATSTAIKEGSQIHACVIKSDKLRDDLVLSYALVDMHAKSCKIKEAK 45
KPDE+TLASVVS CA+ +AIKEG QI+A VIK DK RDDLVL ALVDM+AK ++K+A+
Sbjct: 229 KPDELTLASVVSACASLSAIKEGQQIYAHVIKCDKYRDDLVLGNALVDMYAKCNRLKQAR 288
Query: 44 RVF 36
+F
Sbjct: 289 WIF 291
Score = 80.1 bits (196), Expect(2) = 5e-32
Identities = 37/55 (67%), Positives = 47/55 (85%)
Frame = -3
Query: 390 ALIGMYYKCGSVLDAEKMFDGMNERNIVT*NSLISCFEQNGPASKALELFTRMMD 226
ALI MY KCGSV A+++FD M++RN V+ NSLI+C+EQNGPAS+ALE+F RMMD
Sbjct: 171 ALIDMYSKCGSVASAQRVFDWMSDRNTVSWNSLITCYEQNGPASEALEVFVRMMD 225
Score = 43.5 bits (101), Expect(2) = 6e-09
Identities = 23/52 (44%), Positives = 31/52 (59%)
Frame = -3
Query: 387 LIGMYYKCGSVLDAEKMFDGMNERNIVT*NSLISCFEQNGPASKALELFTRM 232
LI Y KCG + DA K+FD M +RN T NS+IS + G A+++F M
Sbjct: 40 LIDAYGKCGCLDDARKLFDKMPQRNTFTWNSIISTLTKLGFIDDAVQIFRLM 91
Score = 42.4 bits (98), Expect(2) = 6e-09
Identities = 23/61 (37%), Positives = 35/61 (57%)
Frame = -1
Query: 218 DEITLASVVSVCATSTAIKEGSQIHACVIKSDKLRDDLVLSYALVDMHAKSCKIKEAKRV 39
+E + S +S CA +K G QIHA + KS D+ + AL+DM++K + A+RV
Sbjct: 130 NEYSFGSALSACAGLRKLKMGVQIHAFIAKS-CYSSDVYMGSALIDMYSKCGSVASAQRV 188
Query: 38 F 36
F
Sbjct: 189 F 189
>ref|XP_002517667.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223543299|gb|EEF44831.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 628
Score = 87.0 bits (214), Expect(3) = 1e-31
Identities = 42/63 (66%), Positives = 52/63 (82%)
Frame = -1
Query: 224 KPDEITLASVVSVCATSTAIKEGSQIHACVIKSDKLRDDLVLSYALVDMHAKSCKIKEAK 45
+PDE+TLASVVS CA+ A K+G +IHACV+K DKLRDDL+LS ALVDM+AK +I EA+
Sbjct: 249 EPDEVTLASVVSACASLAAAKQGLEIHACVVKRDKLRDDLILSNALVDMYAKCGRINEAR 308
Query: 44 RVF 36
VF
Sbjct: 309 CVF 311
Score = 73.9 bits (180), Expect(3) = 1e-31
Identities = 34/55 (61%), Positives = 46/55 (83%)
Frame = -3
Query: 390 ALIGMYYKCGSVLDAEKMFDGMNERNIVT*NSLISCFEQNGPASKALELFTRMMD 226
ALI +Y KCG V A+++FDGM ERN+V+ NSLI+C+EQNGP+ +ALE+F RMM+
Sbjct: 191 ALIDIYSKCGFVDCAQRVFDGMMERNVVSWNSLITCYEQNGPSREALEIFMRMME 245
Score = 21.9 bits (45), Expect(3) = 1e-31
Identities = 8/12 (66%), Positives = 11/12 (91%)
Frame = -2
Query: 37 FYRMPVRNVVTD 2
F RMP+RNVV++
Sbjct: 311 FDRMPIRNVVSE 322
Score = 41.2 bits (95), Expect(2) = 2e-07
Identities = 20/52 (38%), Positives = 30/52 (57%)
Frame = -3
Query: 387 LIGMYYKCGSVLDAEKMFDGMNERNIVT*NSLISCFEQNGPASKALELFTRM 232
LI Y KCG DA K+FD M E+N+ + N+++S ++G + LF M
Sbjct: 60 LIDAYGKCGCFDDARKIFDQMPEKNVFSWNAIVSTLVKSGFLDEGARLFVSM 111
Score = 39.7 bits (91), Expect(2) = 2e-07
Identities = 23/61 (37%), Positives = 37/61 (60%)
Frame = -1
Query: 218 DEITLASVVSVCATSTAIKEGSQIHACVIKSDKLRDDLVLSYALVDMHAKSCKIKEAKRV 39
+E T S +S CA +K G+QIH ++KS L D+ + AL+D+++K + A+RV
Sbjct: 150 NEYTFGSGLSACAGLKDLKIGTQIHGLMLKSQFLL-DVYMGSALIDIYSKCGFVDCAQRV 208
Query: 38 F 36
F
Sbjct: 209 F 209
Score = 44.3 bits (103), Expect(2) = 6e-07
Identities = 21/55 (38%), Positives = 34/55 (61%)
Frame = -3
Query: 390 ALIGMYYKCGSVLDAEKMFDGMNERNIVT*NSLISCFEQNGPASKALELFTRMMD 226
AL+ MY KCG + +A +FD M RN+V+ S++S + + A LFT+M++
Sbjct: 293 ALVDMYAKCGRINEARCVFDRMPIRNVVSETSMVSGYAKTASVKAARLLFTKMIE 347
Score = 34.7 bits (78), Expect(2) = 6e-07
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Frame = -1
Query: 221 PDEITLASVVSVCATSTAIKEGSQIHACVIKSD-----KLRDDLVLSYALVDMHAKSCKI 57
P T ++++ CA ++ G Q HA V+K D+ + AL+DM+ K +
Sbjct: 383 PTHYTFGNLLNACANLADLQLGRQAHAHVLKHGFRFQYGEESDVFVGNALIDMYMKCGSV 442
Query: 56 KEAKRVF 36
+E R+F
Sbjct: 443 EEGCRIF 449
>ref|XP_007044258.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
cacao] gi|508708193|gb|EOY00090.1| Pentatricopeptide
repeat (PPR) superfamily protein [Theobroma cacao]
Length = 700
Score = 83.6 bits (205), Expect(3) = 2e-31
Identities = 43/63 (68%), Positives = 51/63 (80%)
Frame = -1
Query: 224 KPDEITLASVVSVCATSTAIKEGSQIHACVIKSDKLRDDLVLSYALVDMHAKSCKIKEAK 45
+PDE+TLASVVS CA+ +AIKEG QIHA V+K KLRDDLVL ALVDM+AK +I EA+
Sbjct: 249 EPDEVTLASVVSACASLSAIKEGKQIHARVVKCIKLRDDLVLCNALVDMYAKCSRINEAR 308
Query: 44 RVF 36
VF
Sbjct: 309 CVF 311
Score = 75.9 bits (185), Expect(3) = 2e-31
Identities = 36/55 (65%), Positives = 44/55 (80%)
Frame = -3
Query: 390 ALIGMYYKCGSVLDAEKMFDGMNERNIVT*NSLISCFEQNGPASKALELFTRMMD 226
AL+ MY KCGSV A++ FD MN+RN V+ NSLI+C+EQNGPA ALE+F RMMD
Sbjct: 191 ALVDMYGKCGSVCCAQRAFDDMNQRNRVSWNSLITCYEQNGPAGVALEVFLRMMD 245
Score = 22.3 bits (46), Expect(3) = 2e-31
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -2
Query: 37 FYRMPVRNVVTD 2
F RMPVRNVV++
Sbjct: 311 FDRMPVRNVVSE 322
Score = 43.9 bits (102), Expect(2) = 2e-07
Identities = 23/54 (42%), Positives = 32/54 (59%)
Frame = -3
Query: 387 LIGMYYKCGSVLDAEKMFDGMNERNIVT*NSLISCFEQNGPASKALELFTRMMD 226
LI Y KCGS+ DA K+FD M +RNI + NS I+ + G +A +F M +
Sbjct: 60 LIDAYGKCGSLEDARKVFDRMPQRNIFSWNSAITALTKFGFVDEAARIFGSMSE 113
Score = 37.0 bits (84), Expect(2) = 2e-07
Identities = 22/61 (36%), Positives = 35/61 (57%)
Frame = -1
Query: 218 DEITLASVVSVCATSTAIKEGSQIHACVIKSDKLRDDLVLSYALVDMHAKSCKIKEAKRV 39
+E + S +S C+ +K G+QIHA + K+ L D+ + ALVDM+ K + A+R
Sbjct: 150 NEYSFGSALSACSGLKDMKMGTQIHALMTKTLFL-SDVYMGSALVDMYGKCGSVCCAQRA 208
Query: 38 F 36
F
Sbjct: 209 F 209
Score = 54.7 bits (130), Expect(2) = 2e-07
Identities = 27/54 (50%), Positives = 38/54 (70%)
Frame = -3
Query: 390 ALIGMYYKCGSVLDAEKMFDGMNERNIVT*NSLISCFEQNGPASKALELFTRMM 229
+LI MY KCGSV D +++F M ER+ V+ N++I + QNG +KALELF M+
Sbjct: 431 SLIDMYMKCGSVEDGDQVFKNMMERDWVSWNAMIVGYAQNGYGNKALELFKNML 484
Score = 25.8 bits (55), Expect(2) = 2e-07
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = -1
Query: 224 KPDEITLASVVSVCATSTAIKEGSQIHACVIKSDKLRDDLVLSY-ALVDMHAKSCKIKEA 48
KPD +T+ V+ C+ + ++EG H + S+ L Y +VD+ ++ + EA
Sbjct: 489 KPDHVTMIGVLCACSHAGLVEEGRH-HFSSMSSEHGLVPLKDHYTCMVDLLGRAGCLNEA 547
Query: 47 KRV 39
K +
Sbjct: 548 KNL 550
>gb|EXC23679.1| hypothetical protein L484_015589 [Morus notabilis]
Length = 652
Score = 78.6 bits (192), Expect(3) = 2e-30
Identities = 39/63 (61%), Positives = 49/63 (77%)
Frame = -1
Query: 224 KPDEITLASVVSVCATSTAIKEGSQIHACVIKSDKLRDDLVLSYALVDMHAKSCKIKEAK 45
+PDE+TLASVVS CA+ A+KEG QIH V+K +K RDDL+L ALVDM+AK +I EA+
Sbjct: 194 EPDEVTLASVVSACASLLAVKEGLQIHGRVMKCEKFRDDLILGNALVDMYAKCGRIDEAR 253
Query: 44 RVF 36
VF
Sbjct: 254 WVF 256
Score = 77.8 bits (190), Expect(3) = 2e-30
Identities = 37/55 (67%), Positives = 46/55 (83%)
Frame = -3
Query: 390 ALIGMYYKCGSVLDAEKMFDGMNERNIVT*NSLISCFEQNGPASKALELFTRMMD 226
ALI MY KCGSV A+++FD M ERN V+ NSLISC+EQNGPAS+A+++F RMMD
Sbjct: 136 ALIDMYSKCGSVTCAQRVFDWMEERNRVSWNSLISCYEQNGPASEAIDVFRRMMD 190
Score = 21.9 bits (45), Expect(3) = 2e-30
Identities = 8/12 (66%), Positives = 11/12 (91%)
Frame = -2
Query: 37 FYRMPVRNVVTD 2
F RMP+RNVV++
Sbjct: 256 FDRMPIRNVVSE 267
Score = 46.6 bits (109), Expect(2) = 1e-08
Identities = 23/54 (42%), Positives = 34/54 (62%)
Frame = -3
Query: 387 LIGMYYKCGSVLDAEKMFDGMNERNIVT*NSLISCFEQNGPASKALELFTRMMD 226
LI +Y KCG + DA K+FD M+ERN + NS+I + G +A+++F M D
Sbjct: 5 LIDVYGKCGCLEDARKVFDRMSERNTFSGNSIICVLMKAGLLDEAMQIFEMMPD 58
Score = 38.1 bits (87), Expect(2) = 1e-08
Identities = 20/61 (32%), Positives = 36/61 (59%)
Frame = -1
Query: 218 DEITLASVVSVCATSTAIKEGSQIHACVIKSDKLRDDLVLSYALVDMHAKSCKIKEAKRV 39
++ + S +S CA ++ G QIHA + KS + ++ + AL+DM++K + A+RV
Sbjct: 95 NDYSFGSALSACAGLKDLRMGIQIHAVISKS-RYSSNVYMGSALIDMYSKCGSVTCAQRV 153
Query: 38 F 36
F
Sbjct: 154 F 154
>ref|XP_006432168.1| hypothetical protein CICLE_v10000448mg [Citrus clementina]
gi|568821173|ref|XP_006465064.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g13600-like [Citrus sinensis]
gi|557534290|gb|ESR45408.1| hypothetical protein
CICLE_v10000448mg [Citrus clementina]
Length = 705
Score = 78.2 bits (191), Expect(3) = 3e-30
Identities = 38/54 (70%), Positives = 44/54 (81%)
Frame = -3
Query: 390 ALIGMYYKCGSVLDAEKMFDGMNERNIVT*NSLISCFEQNGPASKALELFTRMM 229
ALI MY KCG V A ++FDGM ERNIV+ NSLI+C+EQNGPAS ALE+F RMM
Sbjct: 191 ALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMM 244
Score = 77.8 bits (190), Expect(3) = 3e-30
Identities = 39/63 (61%), Positives = 50/63 (79%)
Frame = -1
Query: 224 KPDEITLASVVSVCATSTAIKEGSQIHACVIKSDKLRDDLVLSYALVDMHAKSCKIKEAK 45
+PDE+TLASVVS CA+ A KEG QIHA +++ +KLR+DLVL ALVDM+AK K+ EA+
Sbjct: 249 EPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEAR 308
Query: 44 RVF 36
VF
Sbjct: 309 CVF 311
Score = 21.9 bits (45), Expect(3) = 3e-30
Identities = 8/12 (66%), Positives = 11/12 (91%)
Frame = -2
Query: 37 FYRMPVRNVVTD 2
F RMP+RNVV++
Sbjct: 311 FDRMPIRNVVSE 322
Score = 45.4 bits (106), Expect(2) = 7e-09
Identities = 23/61 (37%), Positives = 37/61 (60%)
Frame = -1
Query: 218 DEITLASVVSVCATSTAIKEGSQIHACVIKSDKLRDDLVLSYALVDMHAKSCKIKEAKRV 39
+E + S +S CA S K G+Q+HA + KS + D+ + AL+DM+ K ++ A+RV
Sbjct: 150 NEYSFGSALSACAGSVDFKMGTQVHALLSKS-RYSSDVYMGSALIDMYGKCGRVSCARRV 208
Query: 38 F 36
F
Sbjct: 209 F 209
Score = 40.0 bits (92), Expect(2) = 7e-09
Identities = 21/52 (40%), Positives = 30/52 (57%)
Frame = -3
Query: 387 LIGMYYKCGSVLDAEKMFDGMNERNIVT*NSLISCFEQNGPASKALELFTRM 232
LI +Y KCG + A K+FD M+ +N+ T NS+I+ + G A LF M
Sbjct: 60 LIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASM 111
Score = 43.1 bits (100), Expect(2) = 4e-06
Identities = 20/55 (36%), Positives = 34/55 (61%)
Frame = -3
Query: 390 ALIGMYYKCGSVLDAEKMFDGMNERNIVT*NSLISCFEQNGPASKALELFTRMMD 226
AL+ MY KCG + +A +FD M RN+V+ S++S + + A +FT+M++
Sbjct: 293 ALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLE 347
Score = 33.1 bits (74), Expect(2) = 4e-06
Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 5/67 (7%)
Frame = -1
Query: 221 PDEITLASVVSVCATSTAIKEGSQIHACVIKS-----DKLRDDLVLSYALVDMHAKSCKI 57
P T ++++ CA ++ G Q H V+K D+ + +L+DM+ K +
Sbjct: 383 PTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSV 442
Query: 56 KEAKRVF 36
+E R+F
Sbjct: 443 EEGCRIF 449
>ref|XP_004502949.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cicer arietinum]
Length = 706
Score = 80.9 bits (198), Expect(2) = 7e-30
Identities = 41/63 (65%), Positives = 51/63 (80%)
Frame = -1
Query: 224 KPDEITLASVVSVCATSTAIKEGSQIHACVIKSDKLRDDLVLSYALVDMHAKSCKIKEAK 45
+PDEITLASVVS CA+ +AI+EG QIHA V+K DK R+DLVL ALVDM+AK ++ EA+
Sbjct: 249 EPDEITLASVVSACASLSAIREGLQIHARVMKCDKFRNDLVLGNALVDMYAKCKRVNEAR 308
Query: 44 RVF 36
VF
Sbjct: 309 LVF 311
Score = 75.5 bits (184), Expect(2) = 7e-30
Identities = 35/55 (63%), Positives = 44/55 (80%)
Frame = -3
Query: 390 ALIGMYYKCGSVLDAEKMFDGMNERNIVT*NSLISCFEQNGPASKALELFTRMMD 226
AL+ MY KCG V A++ FD M+ RNIV+ NSLI+C+EQNGPA KALE+F RMM+
Sbjct: 191 ALVDMYSKCGVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMN 245
Score = 45.1 bits (105), Expect(2) = 6e-08
Identities = 22/52 (42%), Positives = 33/52 (63%)
Frame = -3
Query: 387 LIGMYYKCGSVLDAEKMFDGMNERNIVT*NSLISCFEQNGPASKALELFTRM 232
L+ +Y KCG + DA K+FD M ERNI + N+++S + G +AL +F M
Sbjct: 60 LVDVYGKCGCLEDARKVFDHMPERNIFSWNAVLSALTKCGALDEALNVFKCM 111
Score = 37.4 bits (85), Expect(2) = 6e-08
Identities = 21/61 (34%), Positives = 33/61 (54%)
Frame = -1
Query: 218 DEITLASVVSVCATSTAIKEGSQIHACVIKSDKLRDDLVLSYALVDMHAKSCKIKEAKRV 39
+E + S +S CA + G QIH + KS + D+ + ALVDM++K + A+R
Sbjct: 150 NEYSFGSALSACAGLIDLNIGFQIHGLIAKS-RYSFDVYIGSALVDMYSKCGVVASAQRA 208
Query: 38 F 36
F
Sbjct: 209 F 209
Score = 50.8 bits (120), Expect(2) = 2e-06
Identities = 25/53 (47%), Positives = 37/53 (69%)
Frame = -3
Query: 390 ALIGMYYKCGSVLDAEKMFDGMNERNIVT*NSLISCFEQNGPASKALELFTRM 232
+LI MY KCG V D +F+ M ER+IV+ N++I + QNG ++ALE+F +M
Sbjct: 431 SLIDMYMKCGLVEDGRVVFEHMVERDIVSWNAMIVGYAQNGYGTEALEIFRKM 483
Score = 26.6 bits (57), Expect(2) = 2e-06
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = -1
Query: 224 KPDEITLASVVSVCATSTAIKEG 156
KPD +T+ V+S C+ + ++EG
Sbjct: 489 KPDHVTMIGVLSACSHAGLVEEG 511
>ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Glycine max]
Length = 705
Score = 80.9 bits (198), Expect(2) = 7e-30
Identities = 41/63 (65%), Positives = 51/63 (80%)
Frame = -1
Query: 224 KPDEITLASVVSVCATSTAIKEGSQIHACVIKSDKLRDDLVLSYALVDMHAKSCKIKEAK 45
+PDEITLASVVS CA+ +AI+EG QIHA V+K DK R+DLVL ALVDM+AK ++ EA+
Sbjct: 249 EPDEITLASVVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEAR 308
Query: 44 RVF 36
VF
Sbjct: 309 LVF 311
Score = 75.5 bits (184), Expect(2) = 7e-30
Identities = 36/55 (65%), Positives = 43/55 (78%)
Frame = -3
Query: 390 ALIGMYYKCGSVLDAEKMFDGMNERNIVT*NSLISCFEQNGPASKALELFTRMMD 226
AL+ MY KCG V A++ FDGM RNIV+ NSLI+C+EQNGPA KALE+F MMD
Sbjct: 191 ALVDMYSKCGVVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMMD 245
Score = 40.0 bits (92), Expect(2) = 6e-07
Identities = 24/61 (39%), Positives = 35/61 (57%)
Frame = -1
Query: 218 DEITLASVVSVCATSTAIKEGSQIHACVIKSDKLRDDLVLSYALVDMHAKSCKIKEAKRV 39
+E + S +S CA T + G QIHA + KS L D+ + ALVDM++K + A+R
Sbjct: 150 NEYSFGSALSACAGLTDLNMGIQIHALISKSRYLL-DVYMGSALVDMYSKCGVVACAQRA 208
Query: 38 F 36
F
Sbjct: 209 F 209
Score = 38.9 bits (89), Expect(2) = 6e-07
Identities = 19/52 (36%), Positives = 29/52 (55%)
Frame = -3
Query: 387 LIGMYYKCGSVLDAEKMFDGMNERNIVT*NSLISCFEQNGPASKALELFTRM 232
L+ Y KCG DA K+FD M +RN + N+++S + G +A +F M
Sbjct: 60 LVDAYGKCGYFEDARKVFDRMPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSM 111
Score = 49.7 bits (117), Expect(2) = 4e-06
Identities = 24/54 (44%), Positives = 37/54 (68%)
Frame = -3
Query: 390 ALIGMYYKCGSVLDAEKMFDGMNERNIVT*NSLISCFEQNGPASKALELFTRMM 229
+LI MY KCG V D +F+ M ER++V+ N++I + QNG + ALE+F +M+
Sbjct: 431 SLIDMYMKCGMVEDGCLVFERMVERDVVSWNAMIVGYAQNGYGTNALEIFRKML 484
Score = 26.6 bits (57), Expect(2) = 4e-06
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = -1
Query: 224 KPDEITLASVVSVCATSTAIKEG 156
KPD +T+ V+S C+ + ++EG
Sbjct: 489 KPDHVTMIGVLSACSHAGLVEEG 511
>ref|XP_002883803.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297329643|gb|EFH60062.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 697
Score = 85.5 bits (210), Expect(2) = 7e-30
Identities = 38/65 (58%), Positives = 53/65 (81%)
Frame = -1
Query: 230 WTKPDEITLASVVSVCATSTAIKEGSQIHACVIKSDKLRDDLVLSYALVDMHAKSCKIKE 51
W +PDE+TLASV+S CA+ +AIK G ++HA V+K DKLR+D++LS A VDM+AK +IKE
Sbjct: 248 WVEPDEVTLASVISACASLSAIKVGQEVHARVVKMDKLRNDIILSNAFVDMYAKCSRIKE 307
Query: 50 AKRVF 36
A+ +F
Sbjct: 308 ARFIF 312
Score = 70.9 bits (172), Expect(2) = 7e-30
Identities = 31/55 (56%), Positives = 46/55 (83%)
Frame = -3
Query: 390 ALIGMYYKCGSVLDAEKMFDGMNERNIVT*NSLISCFEQNGPASKALELFTRMMD 226
AL+ MY KCG+V DA+++FD M +RN+V+ NSLI+C+EQNGPA +AL++F M++
Sbjct: 192 ALVDMYSKCGNVNDAQQVFDEMGDRNVVSWNSLITCYEQNGPAVEALKVFQVMLE 246
Score = 42.7 bits (99), Expect(2) = 2e-08
Identities = 23/61 (37%), Positives = 37/61 (60%)
Frame = -1
Query: 218 DEITLASVVSVCATSTAIKEGSQIHACVIKSDKLRDDLVLSYALVDMHAKSCKIKEAKRV 39
+E T AS +S C+ + G QIH+ + KS L D+ + ALVDM++K + +A++V
Sbjct: 151 NEYTFASGLSACSGLNDMNRGVQIHSLIAKSPCL-SDVYIGSALVDMYSKCGNVNDAQQV 209
Query: 38 F 36
F
Sbjct: 210 F 210
Score = 41.2 bits (95), Expect(2) = 2e-08
Identities = 21/52 (40%), Positives = 31/52 (59%)
Frame = -3
Query: 387 LIGMYYKCGSVLDAEKMFDGMNERNIVT*NSLISCFEQNGPASKALELFTRM 232
LI Y KCGS+ D ++FD M +RN+ T NS+++ + G +A LF M
Sbjct: 61 LIDAYAKCGSLEDGRQLFDKMPQRNVFTWNSVVTGLTKLGFLDEADSLFRSM 112
Score = 50.1 bits (118), Expect(2) = 5e-07
Identities = 26/55 (47%), Positives = 36/55 (65%)
Frame = -3
Query: 390 ALIGMYYKCGSVLDAEKMFDGMNERNIVT*NSLISCFEQNGPASKALELFTRMMD 226
+LI MY KCG V + +F M ER+ V+ N++I F QNG ++ALELF M+D
Sbjct: 432 SLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLD 486
Score = 29.3 bits (64), Expect(2) = 5e-07
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Frame = -1
Query: 224 KPDEITLASVVSVCATSTAIKEGSQIHACVIKS---DKLRDDLVLSYALVDMHAKSCKIK 54
KPD IT+ V+S C + ++EG + + + LRD +VD+ ++ ++
Sbjct: 490 KPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYT---CMVDLLGRAGFLE 546
Query: 53 EAKRV 39
EAK +
Sbjct: 547 EAKSI 551
>ref|XP_007137795.1| hypothetical protein PHAVU_009G156000g [Phaseolus vulgaris]
gi|561010882|gb|ESW09789.1| hypothetical protein
PHAVU_009G156000g [Phaseolus vulgaris]
Length = 705
Score = 80.1 bits (196), Expect(2) = 2e-29
Identities = 40/63 (63%), Positives = 51/63 (80%)
Frame = -1
Query: 224 KPDEITLASVVSVCATSTAIKEGSQIHACVIKSDKLRDDLVLSYALVDMHAKSCKIKEAK 45
+PDEIT+ASVVS CA+ +A +EG QIHA VIK DK R+DLVL ALVDM+AK +++EA+
Sbjct: 249 EPDEITMASVVSACASLSATREGLQIHARVIKRDKFRNDLVLGNALVDMYAKCKRVREAR 308
Query: 44 RVF 36
VF
Sbjct: 309 LVF 311
Score = 74.7 bits (182), Expect(2) = 2e-29
Identities = 36/55 (65%), Positives = 43/55 (78%)
Frame = -3
Query: 390 ALIGMYYKCGSVLDAEKMFDGMNERNIVT*NSLISCFEQNGPASKALELFTRMMD 226
AL+ MY KCG V A++ FD M RNIV+ NSLI+C+EQNGPA KALE+F RMMD
Sbjct: 191 ALVDMYSKCGVVTCAQRAFDEMVVRNIVSWNSLITCYEQNGPAQKALEIFVRMMD 245
Score = 49.7 bits (117), Expect(2) = 4e-06
Identities = 25/54 (46%), Positives = 37/54 (68%)
Frame = -3
Query: 390 ALIGMYYKCGSVLDAEKMFDGMNERNIVT*NSLISCFEQNGPASKALELFTRMM 229
+LI MY KCG V D +F+ M ER+IV+ N++I + QNG + ALE+F +M+
Sbjct: 431 SLIDMYMKCGMVEDGCLIFEHMVERDIVSWNAMIVGYAQNGYGTDALEIFRKML 484
Score = 26.6 bits (57), Expect(2) = 4e-06
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = -1
Query: 224 KPDEITLASVVSVCATSTAIKEG 156
KPD +T+ V+S C+ + ++EG
Sbjct: 489 KPDHVTMIGVLSACSHAGLVEEG 511
>ref|NP_178983.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206168|sp|Q9SIT7.1|PP151_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At2g13600 gi|4558664|gb|AAD22682.1| hypothetical protein
[Arabidopsis thaliana] gi|330251150|gb|AEC06244.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 697
Score = 80.5 bits (197), Expect(2) = 4e-29
Identities = 36/63 (57%), Positives = 52/63 (82%)
Frame = -1
Query: 224 KPDEITLASVVSVCATSTAIKEGSQIHACVIKSDKLRDDLVLSYALVDMHAKSCKIKEAK 45
+PDE+TLASV+S CA+ +AIK G ++H V+K+DKLR+D++LS A VDM+AK +IKEA+
Sbjct: 250 EPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEAR 309
Query: 44 RVF 36
+F
Sbjct: 310 FIF 312
Score = 73.6 bits (179), Expect(2) = 4e-29
Identities = 32/55 (58%), Positives = 46/55 (83%)
Frame = -3
Query: 390 ALIGMYYKCGSVLDAEKMFDGMNERNIVT*NSLISCFEQNGPASKALELFTRMMD 226
AL+ MY KCG+V DA+++FD M +RN+V+ NSLI+CFEQNGPA +AL++F M++
Sbjct: 192 ALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLE 246
Score = 45.4 bits (106), Expect(2) = 3e-09
Identities = 23/61 (37%), Positives = 39/61 (63%)
Frame = -1
Query: 218 DEITLASVVSVCATSTAIKEGSQIHACVIKSDKLRDDLVLSYALVDMHAKSCKIKEAKRV 39
+E + ASV+S C+ + +G Q+H+ + KS L D+ + ALVDM++K + +A+RV
Sbjct: 151 NEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFL-SDVYIGSALVDMYSKCGNVNDAQRV 209
Query: 38 F 36
F
Sbjct: 210 F 210
Score = 41.2 bits (95), Expect(2) = 3e-09
Identities = 22/52 (42%), Positives = 31/52 (59%)
Frame = -3
Query: 387 LIGMYYKCGSVLDAEKMFDGMNERNIVT*NSLISCFEQNGPASKALELFTRM 232
LI Y KCGS+ D ++FD M +RNI T NS+++ + G +A LF M
Sbjct: 61 LIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSM 112
Score = 48.5 bits (114), Expect(2) = 2e-06
Identities = 25/55 (45%), Positives = 36/55 (65%)
Frame = -3
Query: 390 ALIGMYYKCGSVLDAEKMFDGMNERNIVT*NSLISCFEQNGPASKALELFTRMMD 226
+LI MY KCG V + +F M ER+ V+ N++I F QNG ++ALELF M++
Sbjct: 432 SLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLE 486
Score = 28.5 bits (62), Expect(2) = 2e-06
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Frame = -1
Query: 224 KPDEITLASVVSVCATSTAIKEGSQIHACVIKS---DKLRDDLVLSYALVDMHAKSCKIK 54
KPD IT+ V+S C + ++EG + + + LRD +VD+ ++ ++
Sbjct: 490 KPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYT---CMVDLLGRAGFLE 546
Query: 53 EAK 45
EAK
Sbjct: 547 EAK 549
>ref|XP_006297108.1| hypothetical protein CARUB_v10013108mg [Capsella rubella]
gi|482565817|gb|EOA30006.1| hypothetical protein
CARUB_v10013108mg [Capsella rubella]
Length = 691
Score = 82.8 bits (203), Expect(2) = 6e-29
Identities = 36/65 (55%), Positives = 52/65 (80%)
Frame = -1
Query: 230 WTKPDEITLASVVSVCATSTAIKEGSQIHACVIKSDKLRDDLVLSYALVDMHAKSCKIKE 51
W +PDE+TLASV+S CA+ +AIK G ++H V+K+DKLR+D++L+ A VDM+AK KI E
Sbjct: 248 WVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILTNAFVDMYAKCSKISE 307
Query: 50 AKRVF 36
A+ +F
Sbjct: 308 ARFIF 312
Score = 70.5 bits (171), Expect(2) = 6e-29
Identities = 31/55 (56%), Positives = 45/55 (81%)
Frame = -3
Query: 390 ALIGMYYKCGSVLDAEKMFDGMNERNIVT*NSLISCFEQNGPASKALELFTRMMD 226
AL+ MY KCG V DA+++FD M +RN+V+ NSLI+C+EQNGPA +AL++F M++
Sbjct: 192 ALVDMYSKCGDVDDAQRVFDEMGDRNVVSWNSLITCYEQNGPAVEALKVFQVMLE 246
Score = 51.6 bits (122), Expect(2) = 4e-07
Identities = 27/55 (49%), Positives = 36/55 (65%)
Frame = -3
Query: 390 ALIGMYYKCGSVLDAEKMFDGMNERNIVT*NSLISCFEQNGPASKALELFTRMMD 226
+LI MY KCG V D +F M ER+ V+ N++I F QNG ++ALELF M+D
Sbjct: 432 SLIDMYVKCGCVEDGYLVFRKMMERDCVSWNAMIVGFAQNGYGNEALELFREMLD 486
Score = 28.1 bits (61), Expect(2) = 4e-07
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Frame = -1
Query: 224 KPDEITLASVVSVCATSTAIKEGSQIHACVIKS---DKLRDDLVLSYALVDMHAKSCKIK 54
KPD +T+ V+S C + ++EG + + + LRD +VD+ ++ ++
Sbjct: 490 KPDHVTMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYT---CMVDLLGRAGFLE 546
Query: 53 EAK 45
EAK
Sbjct: 547 EAK 549
>ref|XP_006297107.1| hypothetical protein CARUB_v10013108mg [Capsella rubella]
gi|482565816|gb|EOA30005.1| hypothetical protein
CARUB_v10013108mg [Capsella rubella]
Length = 690
Score = 82.8 bits (203), Expect(2) = 6e-29
Identities = 36/65 (55%), Positives = 52/65 (80%)
Frame = -1
Query: 230 WTKPDEITLASVVSVCATSTAIKEGSQIHACVIKSDKLRDDLVLSYALVDMHAKSCKIKE 51
W +PDE+TLASV+S CA+ +AIK G ++H V+K+DKLR+D++L+ A VDM+AK KI E
Sbjct: 248 WVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILTNAFVDMYAKCSKISE 307
Query: 50 AKRVF 36
A+ +F
Sbjct: 308 ARFIF 312
Score = 70.5 bits (171), Expect(2) = 6e-29
Identities = 31/55 (56%), Positives = 45/55 (81%)
Frame = -3
Query: 390 ALIGMYYKCGSVLDAEKMFDGMNERNIVT*NSLISCFEQNGPASKALELFTRMMD 226
AL+ MY KCG V DA+++FD M +RN+V+ NSLI+C+EQNGPA +AL++F M++
Sbjct: 192 ALVDMYSKCGDVDDAQRVFDEMGDRNVVSWNSLITCYEQNGPAVEALKVFQVMLE 246
Score = 51.6 bits (122), Expect(2) = 4e-07
Identities = 27/55 (49%), Positives = 36/55 (65%)
Frame = -3
Query: 390 ALIGMYYKCGSVLDAEKMFDGMNERNIVT*NSLISCFEQNGPASKALELFTRMMD 226
+LI MY KCG V D +F M ER+ V+ N++I F QNG ++ALELF M+D
Sbjct: 432 SLIDMYVKCGCVEDGYLVFRKMMERDCVSWNAMIVGFAQNGYGNEALELFREMLD 486
Score = 28.1 bits (61), Expect(2) = 4e-07
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Frame = -1
Query: 224 KPDEITLASVVSVCATSTAIKEGSQIHACVIKS---DKLRDDLVLSYALVDMHAKSCKIK 54
KPD +T+ V+S C + ++EG + + + LRD +VD+ ++ ++
Sbjct: 490 KPDHVTMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYT---CMVDLLGRAGFLE 546
Query: 53 EAK 45
EAK
Sbjct: 547 EAK 549
>ref|XP_004237174.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Solanum lycopersicum]
Length = 709
Score = 84.0 bits (206), Expect(2) = 2e-28
Identities = 41/63 (65%), Positives = 52/63 (82%)
Frame = -1
Query: 224 KPDEITLASVVSVCATSTAIKEGSQIHACVIKSDKLRDDLVLSYALVDMHAKSCKIKEAK 45
KPDE TLASVVS CA+ AI+EG +IHA ++KSDKLRDDL++ ALVDM+AKS +I EA+
Sbjct: 252 KPDEKTLASVVSACASLCAIREGKEIHAQIVKSDKLRDDLIICNALVDMYAKSGRIAEAR 311
Query: 44 RVF 36
+F
Sbjct: 312 WIF 314
Score = 67.8 bits (164), Expect(2) = 2e-28
Identities = 33/55 (60%), Positives = 42/55 (76%)
Frame = -3
Query: 390 ALIGMYYKCGSVLDAEKMFDGMNERNIVT*NSLISCFEQNGPASKALELFTRMMD 226
ALI MY K G V A K+F+GM ERN+V+ NSL+SC+EQNGP +AL +F RMM+
Sbjct: 194 ALIDMYSKTGDVDCAAKVFNGMCERNVVSWNSLLSCYEQNGPVKEALVVFARMME 248
Score = 48.5 bits (114), Expect(2) = 8e-06
Identities = 26/54 (48%), Positives = 35/54 (64%)
Frame = -3
Query: 390 ALIGMYYKCGSVLDAEKMFDGMNERNIVT*NSLISCFEQNGPASKALELFTRMM 229
ALI MY KCGSV D +F M +R+ V+ N++I + QNG A +ALE F M+
Sbjct: 434 ALIDMYMKCGSVEDGSCVFTKMLDRDWVSWNAVIVGYAQNGHAMEALETFNAML 487
Score = 26.6 bits (57), Expect(2) = 8e-06
Identities = 15/60 (25%), Positives = 30/60 (50%)
Frame = -1
Query: 224 KPDEITLASVVSVCATSTAIKEGSQIHACVIKSDKLRDDLVLSYALVDMHAKSCKIKEAK 45
KPD +T+ V+ C+ + ++EG + + + L +VD+ K+ ++EAK
Sbjct: 492 KPDHVTMIGVLCACSHAGLVEEGRRYFYSMDRDYGLTPFKDHYTCMVDLLGKAGCLEEAK 551
>ref|XP_003602631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491679|gb|AES72882.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 705
Score = 79.0 bits (193), Expect(2) = 2e-28
Identities = 40/63 (63%), Positives = 50/63 (79%)
Frame = -1
Query: 224 KPDEITLASVVSVCATSTAIKEGSQIHACVIKSDKLRDDLVLSYALVDMHAKSCKIKEAK 45
+PDEITLASV S CA+ +AI+EG QIHA V+K DK R+DLVL ALVDM+AK ++ EA+
Sbjct: 249 EPDEITLASVASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEAR 308
Query: 44 RVF 36
VF
Sbjct: 309 LVF 311
Score = 72.4 bits (176), Expect(2) = 2e-28
Identities = 34/55 (61%), Positives = 43/55 (78%)
Frame = -3
Query: 390 ALIGMYYKCGSVLDAEKMFDGMNERNIVT*NSLISCFEQNGPASKALELFTRMMD 226
AL+ MY KC V A++ FD M+ RNIV+ NSLI+C+EQNGPA KALE+F RMM+
Sbjct: 191 ALVDMYSKCRVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMN 245
Score = 42.0 bits (97), Expect(2) = 6e-07
Identities = 20/52 (38%), Positives = 31/52 (59%)
Frame = -3
Query: 387 LIGMYYKCGSVLDAEKMFDGMNERNIVT*NSLISCFEQNGPASKALELFTRM 232
L+ +Y KCG + DA K+FD M +RN + N+++ + G +AL LF M
Sbjct: 60 LVDVYGKCGFLEDARKVFDHMQQRNTFSWNAVLGALTKFGALDEALNLFKCM 111
Score = 37.0 bits (84), Expect(2) = 6e-07
Identities = 21/61 (34%), Positives = 33/61 (54%)
Frame = -1
Query: 218 DEITLASVVSVCATSTAIKEGSQIHACVIKSDKLRDDLVLSYALVDMHAKSCKIKEAKRV 39
+E + S +S CA + G QIH + KS + D+ + ALVDM++K + A+R
Sbjct: 150 NEYSFGSALSACAGLMDLSIGVQIHGLIAKS-RYSLDVYMGSALVDMYSKCRVVASAQRA 208
Query: 38 F 36
F
Sbjct: 209 F 209
>ref|XP_002310520.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222853423|gb|EEE90970.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 710
Score = 84.7 bits (208), Expect(3) = 3e-28
Identities = 42/63 (66%), Positives = 50/63 (79%)
Frame = -1
Query: 224 KPDEITLASVVSVCATSTAIKEGSQIHACVIKSDKLRDDLVLSYALVDMHAKSCKIKEAK 45
KPDE+TLASVVS CAT A KEG QIHA V+KSDK R+DL+L ALVDM+AK ++ EA+
Sbjct: 254 KPDEVTLASVVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEAR 313
Query: 44 RVF 36
VF
Sbjct: 314 CVF 316
Score = 65.9 bits (159), Expect(3) = 3e-28
Identities = 31/54 (57%), Positives = 40/54 (74%)
Frame = -3
Query: 387 LIGMYYKCGSVLDAEKMFDGMNERNIVT*NSLISCFEQNGPASKALELFTRMMD 226
LI Y KCG V A ++FDGM E+N+V+ N LI+C+EQNGPA +ALE F RM +
Sbjct: 197 LIDFYSKCGLVGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTE 250
Score = 20.8 bits (42), Expect(3) = 3e-28
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -2
Query: 37 FYRMPVRNVVTD 2
F RMPVRN V++
Sbjct: 316 FDRMPVRNAVSE 327
Score = 50.4 bits (119), Expect(2) = 3e-06
Identities = 24/55 (43%), Positives = 39/55 (70%)
Frame = -3
Query: 390 ALIGMYYKCGSVLDAEKMFDGMNERNIVT*NSLISCFEQNGPASKALELFTRMMD 226
+LI MY KCGSV + ++F+ M E++ V+ N++I + QNG +ALELF +M++
Sbjct: 436 SLIDMYMKCGSVEEGLRVFENMVEKDHVSWNTMIIGYAQNGYGMEALELFQKMLE 490
Score = 26.2 bits (56), Expect(2) = 3e-06
Identities = 14/60 (23%), Positives = 29/60 (48%)
Frame = -1
Query: 224 KPDEITLASVVSVCATSTAIKEGSQIHACVIKSDKLRDDLVLSYALVDMHAKSCKIKEAK 45
KPD +T+ + C+ + ++EG + + K L +VD+ ++ ++EAK
Sbjct: 494 KPDHVTMIGTLCACSHAGLVEEGRRYFFSMTKEHGLLPVKDHYTCMVDLLGRAGCLEEAK 553
>ref|XP_006359274.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Solanum tuberosum]
Length = 709
Score = 81.3 bits (199), Expect(2) = 8e-28
Identities = 40/63 (63%), Positives = 51/63 (80%)
Frame = -1
Query: 224 KPDEITLASVVSVCATSTAIKEGSQIHACVIKSDKLRDDLVLSYALVDMHAKSCKIKEAK 45
KPDE TLASVVS CA+ AI+EG +IHA ++KSDKLRDDL++ ALVDM+AK +I EA+
Sbjct: 252 KPDEKTLASVVSACASLCAIREGKEIHARILKSDKLRDDLIICNALVDMYAKFGRIAEAR 311
Query: 44 RVF 36
+F
Sbjct: 312 WIF 314
Score = 68.2 bits (165), Expect(2) = 8e-28
Identities = 33/55 (60%), Positives = 43/55 (78%)
Frame = -3
Query: 390 ALIGMYYKCGSVLDAEKMFDGMNERNIVT*NSLISCFEQNGPASKALELFTRMMD 226
ALI MY K G+V A K+F+GM ERN+V+ NSL+SC+EQNGP +AL +F RMM+
Sbjct: 194 ALIDMYSKTGNVDCAAKVFNGMCERNVVSWNSLLSCYEQNGPVKEALVVFARMME 248
Score = 41.6 bits (96), Expect(2) = 6e-06
Identities = 22/49 (44%), Positives = 31/49 (63%)
Frame = -3
Query: 387 LIGMYYKCGSVLDAEKMFDGMNERNIVT*NSLISCFEQNGPASKALELF 241
L+ Y + SV A +F GM ERN+V+ N+LI+ + QNG +AL LF
Sbjct: 328 LVSGYARVASVKTARAVFLGMIERNVVSWNALIAGYTQNGNNEEALNLF 376
Score = 33.9 bits (76), Expect(2) = 6e-06
Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Frame = -1
Query: 221 PDEITLASVVSVCATSTAIKEGSQIHACVIK-----SDKLRDDLVLSYALVDMHAKSCKI 57
P T ++++ CA +K G Q HA ++K + D+ + AL+DM+ K +
Sbjct: 386 PTHYTFGNLLNACANLADLKLGRQAHAHILKHGFRFQNGPEPDVFVGNALIDMYMKCGSV 445
Query: 56 KEAKRVF 36
++ VF
Sbjct: 446 EDGSCVF 452
>ref|XP_006409682.1| hypothetical protein EUTSA_v10022582mg [Eutrema salsugineum]
gi|557110844|gb|ESQ51135.1| hypothetical protein
EUTSA_v10022582mg [Eutrema salsugineum]
Length = 687
Score = 75.5 bits (184), Expect(2) = 2e-27
Identities = 36/63 (57%), Positives = 49/63 (77%)
Frame = -1
Query: 224 KPDEITLASVVSVCATSTAIKEGSQIHACVIKSDKLRDDLVLSYALVDMHAKSCKIKEAK 45
+PDEITLASV+S CA+ + IK G ++H V K+DKLR+D++LS A VDM+AK IKEA+
Sbjct: 250 EPDEITLASVISACASLSDIKAGQEVHGRVAKNDKLRNDIILSNAFVDMYAKCGMIKEAR 309
Query: 44 RVF 36
+F
Sbjct: 310 FIF 312
Score = 72.4 bits (176), Expect(2) = 2e-27
Identities = 32/54 (59%), Positives = 46/54 (85%)
Frame = -3
Query: 390 ALIGMYYKCGSVLDAEKMFDGMNERNIVT*NSLISCFEQNGPASKALELFTRMM 229
AL+ MY KCG+V DA+++FD M +RN+VT NSLI+C+EQNGPA++AL++F M+
Sbjct: 192 ALVDMYSKCGNVNDAQQVFDEMGDRNVVTWNSLITCYEQNGPAAEALKVFHVML 245
Score = 45.4 bits (106), Expect(2) = 2e-10
Identities = 24/61 (39%), Positives = 39/61 (63%)
Frame = -1
Query: 218 DEITLASVVSVCATSTAIKEGSQIHACVIKSDKLRDDLVLSYALVDMHAKSCKIKEAKRV 39
+E T AS +S C++ + G QIH+ V KS +L D+ + ALVDM++K + +A++V
Sbjct: 151 NEYTFASGLSACSSLNDMNRGIQIHSLVAKSPRL-SDVHIGSALVDMYSKCGNVNDAQQV 209
Query: 38 F 36
F
Sbjct: 210 F 210
Score = 45.1 bits (105), Expect(2) = 2e-10
Identities = 23/52 (44%), Positives = 31/52 (59%)
Frame = -3
Query: 387 LIGMYYKCGSVLDAEKMFDGMNERNIVT*NSLISCFEQNGPASKALELFTRM 232
LI Y KCGS+ D K+FD M +RN+ T NSL++ + G +A LF M
Sbjct: 61 LIDAYAKCGSLEDGRKVFDKMPDRNVYTWNSLVTALAKLGLLDEADSLFMSM 112
Score = 50.8 bits (120), Expect(2) = 2e-06
Identities = 26/55 (47%), Positives = 37/55 (67%)
Frame = -3
Query: 390 ALIGMYYKCGSVLDAEKMFDGMNERNIVT*NSLISCFEQNGPASKALELFTRMMD 226
+LI MY KCG V + +F M ER+ V+ N++I F QNG ++ALELF +M+D
Sbjct: 432 SLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFRKMLD 486
Score = 26.6 bits (57), Expect(2) = 2e-06
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = -1
Query: 224 KPDEITLASVVSVCATSTAIKEGSQIHACVIKS---DKLRDDLVLSYALVDMHAKSCKIK 54
+PD IT+ V+S C + + EG + + + LRD +VD+ ++ +
Sbjct: 490 QPDHITMIGVLSACGHAGLVDEGKHYFSSMTRDFGVTLLRDHYT---CMVDLLGRAGLLD 546
Query: 53 EAK 45
EAK
Sbjct: 547 EAK 549
>ref|XP_006652312.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Oryza brachyantha]
Length = 685
Score = 75.5 bits (184), Expect(2) = 2e-26
Identities = 35/62 (56%), Positives = 48/62 (77%)
Frame = -1
Query: 221 PDEITLASVVSVCATSTAIKEGSQIHACVIKSDKLRDDLVLSYALVDMHAKSCKIKEAKR 42
PDE+T ASV+S CA +EG Q+HAC++KSD+LR+D+VL+ ALVDM+AK + EA+
Sbjct: 246 PDEVTFASVMSACAGLAMAREGRQVHACMVKSDRLREDMVLNNALVDMYAKCGRTWEARC 305
Query: 41 VF 36
VF
Sbjct: 306 VF 307
Score = 69.7 bits (169), Expect(2) = 2e-26
Identities = 33/55 (60%), Positives = 42/55 (76%)
Frame = -3
Query: 390 ALIGMYYKCGSVLDAEKMFDGMNERNIVT*NSLISCFEQNGPASKALELFTRMMD 226
AL+ MY KC +A+K+FD M ERNIV+ NSLI+C+EQNGP +AL LF RMM+
Sbjct: 187 ALVDMYAKCERPEEAQKVFDAMPERNIVSWNSLITCYEQNGPVDEALVLFVRMMN 241
Score = 47.4 bits (111), Expect(2) = 3e-06
Identities = 24/54 (44%), Positives = 35/54 (64%)
Frame = -3
Query: 390 ALIGMYYKCGSVLDAEKMFDGMNERNIVT*NSLISCFEQNGPASKALELFTRMM 229
+L+ MY K GS+ D K+F+ M R+ V+ N++I + QNG A AL LF RM+
Sbjct: 427 SLVDMYLKTGSIDDGAKVFERMAARDDVSWNAMIVGYAQNGRAKDALHLFERML 480
Score = 29.3 bits (64), Expect(2) = 3e-06
Identities = 13/62 (20%), Positives = 30/62 (48%)
Frame = -1
Query: 224 KPDEITLASVVSVCATSTAIKEGSQIHACVIKSDKLRDDLVLSYALVDMHAKSCKIKEAK 45
+PD +T+ V+S C S +KEG + + + + ++D+ ++ +KE +
Sbjct: 485 RPDSVTMIGVLSACGHSGLVKEGRRYFQTMTEDHGITPTRDHYTCMIDLLGRAGHLKEVE 544
Query: 44 RV 39
+
Sbjct: 545 EL 546
Score = 42.0 bits (97), Expect(2) = 4e-06
Identities = 20/53 (37%), Positives = 33/53 (62%)
Frame = -3
Query: 390 ALIGMYYKCGSVLDAEKMFDGMNERNIVT*NSLISCFEQNGPASKALELFTRM 232
+++ Y K +V DA+ +F M E+N++ N LI+ + QNG +AL LF R+
Sbjct: 320 SMVTGYAKSANVEDAQAVFLQMVEKNVIAWNVLIAAYAQNGEEEEALRLFVRL 372
Score = 34.3 bits (77), Expect(2) = 4e-06
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Frame = -1
Query: 221 PDEITLASVVSVCATSTAIKEGSQIHACVIKSDKLRD-----DLVLSYALVDMHAKSCKI 57
P T +V++ CA + G Q HA V+K D D+ + +LVDM+ K+ I
Sbjct: 379 PTHYTYGNVLNSCANLANLPLGQQTHAHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSI 438
Query: 56 KEAKRVF 36
+ +VF
Sbjct: 439 DDGAKVF 445