BLASTX nr result
ID: Sinomenium21_contig00036711
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00036711
(357 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007204966.1| hypothetical protein PRUPE_ppa002297mg [Prun... 189 3e-46
emb|CBI15896.3| unnamed protein product [Vitis vinifera] 188 6e-46
ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containi... 188 6e-46
ref|XP_004305146.1| PREDICTED: pentatricopeptide repeat-containi... 186 4e-45
ref|NP_187518.1| pentatricopeptide repeat-containing protein [Ar... 185 5e-45
ref|XP_002884709.1| pentatricopeptide repeat-containing protein ... 184 1e-44
gb|EXB89950.1| hypothetical protein L484_023602 [Morus notabilis] 182 6e-44
ref|XP_006299210.1| hypothetical protein CARUB_v10015357mg [Caps... 177 1e-42
ref|XP_006407714.1| hypothetical protein EUTSA_v10020196mg [Eutr... 177 1e-42
ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containi... 177 2e-42
ref|XP_007026787.1| Pentatricopeptide repeat (PPR) superfamily p... 176 2e-42
ref|XP_006429305.1| hypothetical protein CICLE_v10011394mg [Citr... 175 5e-42
ref|XP_006480966.1| PREDICTED: pentatricopeptide repeat-containi... 174 2e-41
ref|XP_002322960.2| pentatricopeptide repeat-containing family p... 171 1e-40
ref|XP_002533891.1| pentatricopeptide repeat-containing protein,... 167 2e-39
emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera] 163 3e-38
ref|XP_004246847.1| PREDICTED: pentatricopeptide repeat-containi... 160 1e-37
ref|XP_006363056.1| PREDICTED: pentatricopeptide repeat-containi... 157 2e-36
ref|XP_006363054.1| PREDICTED: pentatricopeptide repeat-containi... 157 2e-36
ref|XP_007140387.1| hypothetical protein PHAVU_008G107400g, part... 155 4e-36
>ref|XP_007204966.1| hypothetical protein PRUPE_ppa002297mg [Prunus persica]
gi|462400608|gb|EMJ06165.1| hypothetical protein
PRUPE_ppa002297mg [Prunus persica]
Length = 690
Score = 189 bits (481), Expect = 3e-46
Identities = 85/118 (72%), Positives = 105/118 (88%)
Frame = +3
Query: 3 KSQECKCSEDVALSVIKAYSNNSMPEQALDVFQRMGEIFGCDPGIRSYNSLLNAFVKSNQ 182
++Q+CKC EDVAL+VIKAY+ NSMP++AL VFQ+M EIFGC PGIRSYNSLLNAF++SNQ
Sbjct: 70 RTQKCKCPEDVALTVIKAYAKNSMPDKALAVFQQMEEIFGCAPGIRSYNSLLNAFIESNQ 129
Query: 183 WDRAESFFAYFETVGMSPNLQTYNVLIKIFCKRRRFEKAKGLLDWMQSRGFRPDLVTY 356
W+RAE FFAYFETVG+SPNLQTYN+LIKI CK+++FEKAK LL WM +G +PD+ +Y
Sbjct: 130 WERAEKFFAYFETVGLSPNLQTYNILIKISCKKKQFEKAKALLSWMWEKGLKPDVFSY 187
>emb|CBI15896.3| unnamed protein product [Vitis vinifera]
Length = 650
Score = 188 bits (478), Expect = 6e-46
Identities = 83/118 (70%), Positives = 105/118 (88%)
Frame = +3
Query: 3 KSQECKCSEDVALSVIKAYSNNSMPEQALDVFQRMGEIFGCDPGIRSYNSLLNAFVKSNQ 182
++Q+CKC EDVAL+VIKAY+ NSMP+QALD+FQRM EIFGC PGIRSYNSLLNA ++SN+
Sbjct: 70 RTQKCKCPEDVALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNK 129
Query: 183 WDRAESFFAYFETVGMSPNLQTYNVLIKIFCKRRRFEKAKGLLDWMQSRGFRPDLVTY 356
WD AESFF YFET+G+SPNLQTYN+LIKI C++++F+KAK LL+WM +GF PD+ +Y
Sbjct: 130 WDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSY 187
Score = 57.8 bits (138), Expect = 2e-06
Identities = 31/105 (29%), Positives = 54/105 (51%)
Frame = +3
Query: 42 SVIKAYSNNSMPEQALDVFQRMGEIFGCDPGIRSYNSLLNAFVKSNQWDRAESFFAYFET 221
S+I ++ V +M + GC P N+++N FV++++ + A FF +
Sbjct: 434 SMINGLCREGRLDEVAGVLDQMTK-HGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVS 492
Query: 222 VGMSPNLQTYNVLIKIFCKRRRFEKAKGLLDWMQSRGFRPDLVTY 356
G P + TYN LI K RF +A L+ M +G++P+++TY
Sbjct: 493 KGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITY 537
Score = 55.8 bits (133), Expect = 6e-06
Identities = 33/111 (29%), Positives = 55/111 (49%)
Frame = +3
Query: 15 CKCSEDVALSVIKAYSNNSMPEQALDVFQRMGEIFGCDPGIRSYNSLLNAFVKSNQWDRA 194
CK + V +VI + S E AL F M GC P + +YN+L+N K+ ++ A
Sbjct: 460 CKPNPHVCNAVINGFVRASKLEDALRFFGNMVSK-GCFPTVVTYNTLINGLSKAERFSEA 518
Query: 195 ESFFAYFETVGMSPNLQTYNVLIKIFCKRRRFEKAKGLLDWMQSRGFRPDL 347
+ G PN+ TY++L+ C+ ++ + A L +GF+PD+
Sbjct: 519 YALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDV 569
>ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
[Vitis vinifera]
Length = 691
Score = 188 bits (478), Expect = 6e-46
Identities = 83/118 (70%), Positives = 105/118 (88%)
Frame = +3
Query: 3 KSQECKCSEDVALSVIKAYSNNSMPEQALDVFQRMGEIFGCDPGIRSYNSLLNAFVKSNQ 182
++Q+CKC EDVAL+VIKAY+ NSMP+QALD+FQRM EIFGC PGIRSYNSLLNA ++SN+
Sbjct: 70 RTQKCKCPEDVALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNK 129
Query: 183 WDRAESFFAYFETVGMSPNLQTYNVLIKIFCKRRRFEKAKGLLDWMQSRGFRPDLVTY 356
WD AESFF YFET+G+SPNLQTYN+LIKI C++++F+KAK LL+WM +GF PD+ +Y
Sbjct: 130 WDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSY 187
Score = 57.8 bits (138), Expect = 2e-06
Identities = 31/105 (29%), Positives = 54/105 (51%)
Frame = +3
Query: 42 SVIKAYSNNSMPEQALDVFQRMGEIFGCDPGIRSYNSLLNAFVKSNQWDRAESFFAYFET 221
S+I ++ V +M + GC P N+++N FV++++ + A FF +
Sbjct: 434 SMINGLCREGRLDEVAGVLDQMTK-HGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVS 492
Query: 222 VGMSPNLQTYNVLIKIFCKRRRFEKAKGLLDWMQSRGFRPDLVTY 356
G P + TYN LI K RF +A L+ M +G++P+++TY
Sbjct: 493 KGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITY 537
Score = 55.8 bits (133), Expect = 6e-06
Identities = 33/111 (29%), Positives = 55/111 (49%)
Frame = +3
Query: 15 CKCSEDVALSVIKAYSNNSMPEQALDVFQRMGEIFGCDPGIRSYNSLLNAFVKSNQWDRA 194
CK + V +VI + S E AL F M GC P + +YN+L+N K+ ++ A
Sbjct: 460 CKPNPHVCNAVINGFVRASKLEDALRFFGNMVSK-GCFPTVVTYNTLINGLSKAERFSEA 518
Query: 195 ESFFAYFETVGMSPNLQTYNVLIKIFCKRRRFEKAKGLLDWMQSRGFRPDL 347
+ G PN+ TY++L+ C+ ++ + A L +GF+PD+
Sbjct: 519 YALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDV 569
>ref|XP_004305146.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Fragaria vesca subsp. vesca]
Length = 696
Score = 186 bits (471), Expect = 4e-45
Identities = 81/118 (68%), Positives = 105/118 (88%)
Frame = +3
Query: 3 KSQECKCSEDVALSVIKAYSNNSMPEQALDVFQRMGEIFGCDPGIRSYNSLLNAFVKSNQ 182
++Q+C+C EDVAL+VIKAY+ NSMP++AL++F +M EIFGC+PGIRSYN+LLNAF++SNQ
Sbjct: 70 RTQKCQCPEDVALTVIKAYTKNSMPDKALEIFHQMREIFGCEPGIRSYNALLNAFIESNQ 129
Query: 183 WDRAESFFAYFETVGMSPNLQTYNVLIKIFCKRRRFEKAKGLLDWMQSRGFRPDLVTY 356
WDRAE FAYFETVG+ PNLQTYN LIKI CK+R+FEKA+ LLDWM +G +PD+++Y
Sbjct: 130 WDRAEQLFAYFETVGLVPNLQTYNTLIKISCKKRQFEKARRLLDWMWEKGLKPDVMSY 187
>ref|NP_187518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207466|sp|Q9SS81.1|PP221_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g09060 gi|5923671|gb|AAD56322.1|AC009326_9
hypothetical protein [Arabidopsis thaliana]
gi|332641194|gb|AEE74715.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 687
Score = 185 bits (470), Expect = 5e-45
Identities = 83/118 (70%), Positives = 100/118 (84%)
Frame = +3
Query: 3 KSQECKCSEDVALSVIKAYSNNSMPEQALDVFQRMGEIFGCDPGIRSYNSLLNAFVKSNQ 182
+SQECKC EDVALSVIK Y NSMP+QALDVF+RM EIFGC+P IRSYN+LLNAFV++ Q
Sbjct: 70 RSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQ 129
Query: 183 WDRAESFFAYFETVGMSPNLQTYNVLIKIFCKRRRFEKAKGLLDWMQSRGFRPDLVTY 356
W + ES FAYFET G++PNLQTYNVLIK+ CK++ FEKA+G LDWM GF+PD+ +Y
Sbjct: 130 WVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSY 187
>ref|XP_002884709.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297330549|gb|EFH60968.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 689
Score = 184 bits (467), Expect = 1e-44
Identities = 82/118 (69%), Positives = 101/118 (85%)
Frame = +3
Query: 3 KSQECKCSEDVALSVIKAYSNNSMPEQALDVFQRMGEIFGCDPGIRSYNSLLNAFVKSNQ 182
+SQECKC EDVALSVIK Y NSMP++ALDVF+RM EIFGC+PGIRSYN+LLNAFV++ Q
Sbjct: 70 RSQECKCDEDVALSVIKTYGKNSMPDRALDVFKRMREIFGCEPGIRSYNTLLNAFVEAKQ 129
Query: 183 WDRAESFFAYFETVGMSPNLQTYNVLIKIFCKRRRFEKAKGLLDWMQSRGFRPDLVTY 356
W + ES FAYFET G++PNLQTYNVLIK+ CK++ FEKA+G L+WM GF+PD+ +Y
Sbjct: 130 WVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLNWMWKEGFKPDVFSY 187
>gb|EXB89950.1| hypothetical protein L484_023602 [Morus notabilis]
Length = 692
Score = 182 bits (461), Expect = 6e-44
Identities = 84/119 (70%), Positives = 104/119 (87%), Gaps = 1/119 (0%)
Frame = +3
Query: 3 KSQECKCSEDVALSVIKAYSNNSMPEQALDVFQRMGEIFGCDPGIRSYNSLLNAFVKSNQ 182
++Q+C+C EDVAL+VIKAY NSMP+QALDVF+RM EIFGC P +RSYNSLLNAFV++N+
Sbjct: 70 RTQKCECPEDVALAVIKAYGKNSMPDQALDVFRRMDEIFGCKPEVRSYNSLLNAFVEANR 129
Query: 183 WDRAESFFAYFE-TVGMSPNLQTYNVLIKIFCKRRRFEKAKGLLDWMQSRGFRPDLVTY 356
WD+AE FFAYF + G+SPNLQ+YNVLIK+ CK+RRFEKAK LLDWM S G +P+LV+Y
Sbjct: 130 WDKAEQFFAYFSGSRGVSPNLQSYNVLIKVLCKKRRFEKAKKLLDWMWSEGLKPNLVSY 188
>ref|XP_006299210.1| hypothetical protein CARUB_v10015357mg [Capsella rubella]
gi|482567919|gb|EOA32108.1| hypothetical protein
CARUB_v10015357mg [Capsella rubella]
Length = 687
Score = 177 bits (450), Expect = 1e-42
Identities = 80/118 (67%), Positives = 98/118 (83%)
Frame = +3
Query: 3 KSQECKCSEDVALSVIKAYSNNSMPEQALDVFQRMGEIFGCDPGIRSYNSLLNAFVKSNQ 182
+SQ CKC EDVALSVIK Y NSMP++ALDVFQRM EIFGC+PGIRSYN+LLNA V++ +
Sbjct: 70 RSQGCKCDEDVALSVIKTYGKNSMPDRALDVFQRMVEIFGCEPGIRSYNTLLNALVEAKR 129
Query: 183 WDRAESFFAYFETVGMSPNLQTYNVLIKIFCKRRRFEKAKGLLDWMQSRGFRPDLVTY 356
W ES FAY ET G++PNLQTYNVLIK++CKR++FEKA+G LDWM F+PD+ +Y
Sbjct: 130 WVEVESLFAYLETAGVAPNLQTYNVLIKMYCKRKQFEKARGFLDWMWKARFKPDVFSY 187
>ref|XP_006407714.1| hypothetical protein EUTSA_v10020196mg [Eutrema salsugineum]
gi|557108860|gb|ESQ49167.1| hypothetical protein
EUTSA_v10020196mg [Eutrema salsugineum]
Length = 687
Score = 177 bits (449), Expect = 1e-42
Identities = 82/118 (69%), Positives = 99/118 (83%)
Frame = +3
Query: 3 KSQECKCSEDVALSVIKAYSNNSMPEQALDVFQRMGEIFGCDPGIRSYNSLLNAFVKSNQ 182
+SQECKC EDVALSVIK Y NSMP++ALDVFQRM EIFGC+PGIRSYNSLL+AFV++ Q
Sbjct: 70 RSQECKCDEDVALSVIKIYGKNSMPDRALDVFQRMREIFGCEPGIRSYNSLLSAFVEAEQ 129
Query: 183 WDRAESFFAYFETVGMSPNLQTYNVLIKIFCKRRRFEKAKGLLDWMQSRGFRPDLVTY 356
W + ES FAY ET G++PNLQTYNVLIK+ CK+++FEKAK LLD M G +PD+ +Y
Sbjct: 130 WAKVESLFAYIETAGLAPNLQTYNVLIKMPCKKKQFEKAKDLLDCMWKEGLKPDVYSY 187
>ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
gi|449516585|ref|XP_004165327.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
Length = 701
Score = 177 bits (448), Expect = 2e-42
Identities = 79/118 (66%), Positives = 98/118 (83%)
Frame = +3
Query: 3 KSQECKCSEDVALSVIKAYSNNSMPEQALDVFQRMGEIFGCDPGIRSYNSLLNAFVKSNQ 182
++Q C CSEDVALS IKAY+ SMP+QAL++FQ M +IFGC+PGIRS+NS+LNAF++SNQ
Sbjct: 70 RAQRCTCSEDVALSAIKAYAKCSMPDQALNLFQNMVDIFGCNPGIRSFNSMLNAFIESNQ 129
Query: 183 WDRAESFFAYFETVGMSPNLQTYNVLIKIFCKRRRFEKAKGLLDWMQSRGFRPDLVTY 356
W AE FF YF+T GMSPNLQTYN+LIKI CK+R+FEK KGLL WM G PD+++Y
Sbjct: 130 WREAELFFTYFQTAGMSPNLQTYNILIKISCKKRQFEKGKGLLTWMFENGLNPDILSY 187
>ref|XP_007026787.1| Pentatricopeptide repeat (PPR) superfamily protein isoform 1
[Theobroma cacao] gi|590628694|ref|XP_007026788.1|
Pentatricopeptide repeat (PPR) superfamily protein
isoform 1 [Theobroma cacao] gi|508715392|gb|EOY07289.1|
Pentatricopeptide repeat (PPR) superfamily protein
isoform 1 [Theobroma cacao] gi|508715393|gb|EOY07290.1|
Pentatricopeptide repeat (PPR) superfamily protein
isoform 1 [Theobroma cacao]
Length = 685
Score = 176 bits (447), Expect = 2e-42
Identities = 79/118 (66%), Positives = 99/118 (83%)
Frame = +3
Query: 3 KSQECKCSEDVALSVIKAYSNNSMPEQALDVFQRMGEIFGCDPGIRSYNSLLNAFVKSNQ 182
++Q+C C EDV L+VIKAY+ NSMPE+ALD FQRM IFGC+PGIRSYN+LLNAF +SN+
Sbjct: 70 EAQKCNCPEDVPLTVIKAYAKNSMPEKALDSFQRMKRIFGCEPGIRSYNTLLNAFAESNR 129
Query: 183 WDRAESFFAYFETVGMSPNLQTYNVLIKIFCKRRRFEKAKGLLDWMQSRGFRPDLVTY 356
W++AESFF YFETVG+ PNLQTYN+LIKI C++ FEKAK LLDW+ GF P++ +Y
Sbjct: 130 WEQAESFFKYFETVGVKPNLQTYNILIKIACRKEHFEKAKRLLDWIWKMGFHPNVQSY 187
Score = 60.8 bits (146), Expect = 2e-07
Identities = 27/79 (34%), Positives = 47/79 (59%)
Frame = +3
Query: 120 GCDPGIRSYNSLLNAFVKSNQWDRAESFFAYFETVGMSPNLQTYNVLIKIFCKRRRFEKA 299
GC N +++ F+++++ D A FF +++G SP + +YN+LI CK RF +A
Sbjct: 459 GCKLNPYICNPMIHGFIQASRLDDAVQFFKGMDSMGYSPTVASYNILISGLCKAERFREA 518
Query: 300 KGLLDWMQSRGFRPDLVTY 356
L M +G++PD++TY
Sbjct: 519 YCFLKEMLEKGWKPDMITY 537
>ref|XP_006429305.1| hypothetical protein CICLE_v10011394mg [Citrus clementina]
gi|557531362|gb|ESR42545.1| hypothetical protein
CICLE_v10011394mg [Citrus clementina]
Length = 559
Score = 175 bits (444), Expect = 5e-42
Identities = 79/116 (68%), Positives = 99/116 (85%)
Frame = +3
Query: 9 QECKCSEDVALSVIKAYSNNSMPEQALDVFQRMGEIFGCDPGIRSYNSLLNAFVKSNQWD 188
Q+C C EDVALSVI+AY NSMP++ALDVFQRM EIFGC+ G+RSYN+LLNAFV+S QWD
Sbjct: 67 QKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGVRSYNALLNAFVESKQWD 126
Query: 189 RAESFFAYFETVGMSPNLQTYNVLIKIFCKRRRFEKAKGLLDWMQSRGFRPDLVTY 356
RAESF +YFET G+SPNLQTYN+LIKI C++R+FEKAK L+ + +G +PD+ +Y
Sbjct: 127 RAESFISYFETAGISPNLQTYNILIKILCRKRQFEKAKRFLNSLWEKGLKPDVYSY 182
Score = 58.5 bits (140), Expect = 9e-07
Identities = 32/105 (30%), Positives = 53/105 (50%)
Frame = +3
Query: 42 SVIKAYSNNSMPEQALDVFQRMGEIFGCDPGIRSYNSLLNAFVKSNQWDRAESFFAYFET 221
S+I A + RM + GC + NSL+N F+++++ + A F
Sbjct: 429 SMIDGLCKEGRLADAASLVNRMDK-HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSR 487
Query: 222 VGMSPNLQTYNVLIKIFCKRRRFEKAKGLLDWMQSRGFRPDLVTY 356
G SP + +Y+ LI CK RF +A G + M +G++PD++TY
Sbjct: 488 KGCSPTVVSYHTLINGLCKVERFGEAYGFVKEMLEKGWKPDMITY 532
>ref|XP_006480966.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Citrus sinensis]
Length = 686
Score = 174 bits (440), Expect = 2e-41
Identities = 78/116 (67%), Positives = 99/116 (85%)
Frame = +3
Query: 9 QECKCSEDVALSVIKAYSNNSMPEQALDVFQRMGEIFGCDPGIRSYNSLLNAFVKSNQWD 188
Q+C C EDVALSVI+AY NSMP++ALDVFQRM EIFGC+ G+RSYN+LLNAFV+S QWD
Sbjct: 67 QKCYCPEDVALSVIQAYGKNSMPDKALDVFQRMNEIFGCEAGVRSYNALLNAFVESKQWD 126
Query: 189 RAESFFAYFETVGMSPNLQTYNVLIKIFCKRRRFEKAKGLLDWMQSRGFRPDLVTY 356
RAESF +YFET G+SPNLQT+N+LIKI C++R+FEKAK L+ + +G +PD+ +Y
Sbjct: 127 RAESFISYFETAGISPNLQTFNILIKILCRKRQFEKAKRFLNSLWEKGLKPDVYSY 182
Score = 60.5 bits (145), Expect = 2e-07
Identities = 33/105 (31%), Positives = 53/105 (50%)
Frame = +3
Query: 42 SVIKAYSNNSMPEQALDVFQRMGEIFGCDPGIRSYNSLLNAFVKSNQWDRAESFFAYFET 221
S+I A + RM + GC + NSL+N F+++++ + A F
Sbjct: 429 SMIDGLCKEGRLADAASLVNRMDK-HGCKLNAYTCNSLMNGFIQASKLENAIFLFKEMSR 487
Query: 222 VGMSPNLQTYNVLIKIFCKRRRFEKAKGLLDWMQSRGFRPDLVTY 356
G SP + +YN LI CK RF +A G + M +G++PD++TY
Sbjct: 488 KGCSPTVVSYNTLINGLCKVERFGEAYGFVKEMLEKGWKPDMITY 532
Score = 58.5 bits (140), Expect = 9e-07
Identities = 33/114 (28%), Positives = 55/114 (48%)
Frame = +3
Query: 15 CKCSEDVALSVIKAYSNNSMPEQALDVFQRMGEIFGCDPGIRSYNSLLNAFVKSNQWDRA 194
CK + S++ + S E A+ +F+ M GC P + SYN+L+N K ++ A
Sbjct: 455 CKLNAYTCNSLMNGFIQASKLENAIFLFKEMSRK-GCSPTVVSYNTLINGLCKVERFGEA 513
Query: 195 ESFFAYFETVGMSPNLQTYNVLIKIFCKRRRFEKAKGLLDWMQSRGFRPDLVTY 356
F G P++ TY++LI C+ ++ + A L +GF PD+ Y
Sbjct: 514 YGFVKEMLEKGWKPDMITYSLLINGLCQSKKIDVALKLWCQFLQKGFTPDVTMY 567
>ref|XP_002322960.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550321307|gb|EEF04721.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 694
Score = 171 bits (432), Expect = 1e-40
Identities = 77/118 (65%), Positives = 100/118 (84%)
Frame = +3
Query: 3 KSQECKCSEDVALSVIKAYSNNSMPEQALDVFQRMGEIFGCDPGIRSYNSLLNAFVKSNQ 182
K+Q+CKC+EDV L+V+KAY+ + MP +ALD FQ+M EIFGC PGIRSYN+LLNAF+++N
Sbjct: 70 KTQKCKCTEDVVLTVLKAYAKSKMPNEALDCFQKMEEIFGCKPGIRSYNALLNAFIEANL 129
Query: 183 WDRAESFFAYFETVGMSPNLQTYNVLIKIFCKRRRFEKAKGLLDWMQSRGFRPDLVTY 356
D+AESF AYFETVG+ PNLQTYN+LIKI K+R+F +AKGLLDWM S+ +PD+ +Y
Sbjct: 130 LDKAESFLAYFETVGILPNLQTYNILIKISVKKRQFVEAKGLLDWMWSKDLKPDVYSY 187
Score = 68.9 bits (167), Expect = 7e-10
Identities = 34/105 (32%), Positives = 57/105 (54%)
Frame = +3
Query: 42 SVIKAYSNNSMPEQALDVFQRMGEIFGCDPGIRSYNSLLNAFVKSNQWDRAESFFAYFET 221
S++ S ++AL + +M + +GC+ N L+N FV++++ + A FF ET
Sbjct: 434 SIVDGLSKQGRVDEALGIVHQMDK-YGCELSPHVCNPLINGFVRASKLEEAICFFREMET 492
Query: 222 VGMSPNLQTYNVLIKIFCKRRRFEKAKGLLDWMQSRGFRPDLVTY 356
G SP + +YN LI CK RF A + M + ++PD++TY
Sbjct: 493 KGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITY 537
Score = 56.2 bits (134), Expect = 5e-06
Identities = 32/114 (28%), Positives = 57/114 (50%)
Frame = +3
Query: 15 CKCSEDVALSVIKAYSNNSMPEQALDVFQRMGEIFGCDPGIRSYNSLLNAFVKSNQWDRA 194
C+ S V +I + S E+A+ F+ M E GC P + SYN+L+N K+ ++ A
Sbjct: 460 CELSPHVCNPLINGFVRASKLEEAICFFREM-ETKGCSPTVVSYNTLINGLCKAERFSDA 518
Query: 195 ESFFAYFETVGMSPNLQTYNVLIKIFCKRRRFEKAKGLLDWMQSRGFRPDLVTY 356
SF P++ TY++L+ C+ ++ + A L + +G PD+ +
Sbjct: 519 YSFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMH 572
>ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223526155|gb|EEF28491.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 701
Score = 167 bits (422), Expect = 2e-39
Identities = 75/118 (63%), Positives = 96/118 (81%)
Frame = +3
Query: 3 KSQECKCSEDVALSVIKAYSNNSMPEQALDVFQRMGEIFGCDPGIRSYNSLLNAFVKSNQ 182
K+Q+C C EDVAL+VIKAY+ N M +ALD FQ M +IFGC PG+RSYN+LLNAFV+ N+
Sbjct: 72 KAQKCPCKEDVALTVIKAYAKNKMSNKALDTFQNMQDIFGCKPGVRSYNTLLNAFVELNE 131
Query: 183 WDRAESFFAYFETVGMSPNLQTYNVLIKIFCKRRRFEKAKGLLDWMQSRGFRPDLVTY 356
WDRAESF YFE++ +SPNLQTYN+LIKI CK+++ EKA LLDWM S+ +PD+ +Y
Sbjct: 132 WDRAESFSRYFESMDVSPNLQTYNILIKISCKKQQIEKAISLLDWMWSQNLKPDVFSY 189
Score = 58.2 bits (139), Expect = 1e-06
Identities = 31/105 (29%), Positives = 57/105 (54%), Gaps = 1/105 (0%)
Frame = +3
Query: 42 SVIKAYSNNSMPEQALDVFQRMGEI-FGCDPGIRSYNSLLNAFVKSNQWDRAESFFAYFE 218
S++ ++A+ + +M + + DP + N L+N FV++++ + A +FF E
Sbjct: 436 SMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHV--CNPLINGFVRASKLEDAINFFREME 493
Query: 219 TVGMSPNLQTYNVLIKIFCKRRRFEKAKGLLDWMQSRGFRPDLVT 353
G SP + +YN LIK CK RF +A + M + ++PD++T
Sbjct: 494 CKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMIT 538
Score = 56.6 bits (135), Expect = 4e-06
Identities = 33/113 (29%), Positives = 54/113 (47%)
Frame = +3
Query: 18 KCSEDVALSVIKAYSNNSMPEQALDVFQRMGEIFGCDPGIRSYNSLLNAFVKSNQWDRAE 197
K V +I + S E A++ F+ M E GC P I SYN+L+ K+ ++ A
Sbjct: 463 KLDPHVCNPLINGFVRASKLEDAINFFREM-ECKGCSPTIVSYNTLIKGLCKAERFSEAY 521
Query: 198 SFFAYFETVGMSPNLQTYNVLIKIFCKRRRFEKAKGLLDWMQSRGFRPDLVTY 356
SF P++ T ++L+ C+ ++ E A L +GF+PD+ Y
Sbjct: 522 SFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQALDKGFKPDITMY 574
>emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
Length = 913
Score = 163 bits (412), Expect = 3e-38
Identities = 72/104 (69%), Positives = 90/104 (86%)
Frame = +3
Query: 45 VIKAYSNNSMPEQALDVFQRMGEIFGCDPGIRSYNSLLNAFVKSNQWDRAESFFAYFETV 224
V AY+ NSMP+QALD+FQRM EIFGC PGIRSYNSLLNA ++SN+WD AESFF YFET+
Sbjct: 59 VAHAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETM 118
Query: 225 GMSPNLQTYNVLIKIFCKRRRFEKAKGLLDWMQSRGFRPDLVTY 356
G+SPNLQTYN+LIKI C++++F+KAK LL+WM +GF PD+ +Y
Sbjct: 119 GLSPNLQTYNILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSY 162
Score = 57.4 bits (137), Expect = 2e-06
Identities = 31/105 (29%), Positives = 54/105 (51%)
Frame = +3
Query: 42 SVIKAYSNNSMPEQALDVFQRMGEIFGCDPGIRSYNSLLNAFVKSNQWDRAESFFAYFET 221
S+I ++ V +M + GC P N+++N FV++++ + A FF +
Sbjct: 409 SMINGLCREGRLDEVAGVLDQMTK-HGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVS 467
Query: 222 VGMSPNLQTYNVLIKIFCKRRRFEKAKGLLDWMQSRGFRPDLVTY 356
G P + TYN LI K RF +A L+ M +G++P+++TY
Sbjct: 468 KGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITY 512
Score = 55.5 bits (132), Expect = 8e-06
Identities = 33/111 (29%), Positives = 55/111 (49%)
Frame = +3
Query: 15 CKCSEDVALSVIKAYSNNSMPEQALDVFQRMGEIFGCDPGIRSYNSLLNAFVKSNQWDRA 194
CK + V +VI + S E AL F M GC P + +YN+L+N K+ ++ A
Sbjct: 435 CKPNPYVCNAVINGFVRASKLEDALRFFGNMVSK-GCFPTVVTYNTLINGLSKAERFSEA 493
Query: 195 ESFFAYFETVGMSPNLQTYNVLIKIFCKRRRFEKAKGLLDWMQSRGFRPDL 347
+ G PN+ TY++L+ C+ ++ + A L +GF+PD+
Sbjct: 494 YALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDV 544
>ref|XP_004246847.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Solanum lycopersicum]
Length = 687
Score = 160 bits (406), Expect = 1e-37
Identities = 74/118 (62%), Positives = 95/118 (80%)
Frame = +3
Query: 3 KSQECKCSEDVALSVIKAYSNNSMPEQALDVFQRMGEIFGCDPGIRSYNSLLNAFVKSNQ 182
++Q+C CSEDVAL+VIK Y+ NSM ++A+++FQ M IFGC PG+RS+N+LLNAFV SNQ
Sbjct: 70 QTQKCLCSEDVALTVIKGYAKNSMVDKAMEIFQNMKNIFGCIPGVRSFNTLLNAFVVSNQ 129
Query: 183 WDRAESFFAYFETVGMSPNLQTYNVLIKIFCKRRRFEKAKGLLDWMQSRGFRPDLVTY 356
RAE FF YF T+G+SPNL+TYNVLIK+ CK+R+F+KAK LLDWM PD+ TY
Sbjct: 130 LSRAELFFKYFGTMGVSPNLETYNVLIKLACKKRQFDKAKELLDWMWESKLMPDVYTY 187
Score = 63.5 bits (153), Expect = 3e-08
Identities = 38/119 (31%), Positives = 61/119 (51%), Gaps = 1/119 (0%)
Frame = +3
Query: 3 KSQECKCSEDVALS-VIKAYSNNSMPEQALDVFQRMGEIFGCDPGIRSYNSLLNAFVKSN 179
++Q +C + A S ++K E+A + M + GC N+L+N F+K++
Sbjct: 420 ENQGERCMDSYAYSSIVKGLCREGRLEEANAILDLMAKQ-GCTLSSHVCNALINGFIKAS 478
Query: 180 QWDRAESFFAYFETVGMSPNLQTYNVLIKIFCKRRRFEKAKGLLDWMQSRGFRPDLVTY 356
+ A FF + SP + TYNVLI CK RF A L++ M +G+ PD++TY
Sbjct: 479 KIAEALRFFGEMSSRNCSPTVVTYNVLIDGLCKAERFGDAYKLVEDMLQKGWTPDMITY 537
>ref|XP_006363056.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like isoform X3 [Solanum tuberosum]
Length = 634
Score = 157 bits (396), Expect = 2e-36
Identities = 73/118 (61%), Positives = 94/118 (79%)
Frame = +3
Query: 3 KSQECKCSEDVALSVIKAYSNNSMPEQALDVFQRMGEIFGCDPGIRSYNSLLNAFVKSNQ 182
++Q+C CSEDVAL+VIK Y+ NSM ++A++VFQ M IFGC PG+RS+N+LLNAFV SNQ
Sbjct: 70 QTQKCLCSEDVALTVIKGYAKNSMVDKAMEVFQNMKNIFGCIPGVRSFNTLLNAFVVSNQ 129
Query: 183 WDRAESFFAYFETVGMSPNLQTYNVLIKIFCKRRRFEKAKGLLDWMQSRGFRPDLVTY 356
RAE FF YF T+G+SPNL+TYNVLIK+ CK+ +F+KAK LLDWM PD+ +Y
Sbjct: 130 LSRAELFFKYFGTMGVSPNLETYNVLIKLACKKGQFDKAKELLDWMWESKLMPDVYSY 187
Score = 60.8 bits (146), Expect = 2e-07
Identities = 34/105 (32%), Positives = 54/105 (51%)
Frame = +3
Query: 42 SVIKAYSNNSMPEQALDVFQRMGEIFGCDPGIRSYNSLLNAFVKSNQWDRAESFFAYFET 221
S++K ++A + M + GC N+L+N F+K+++ A FF +
Sbjct: 434 SIVKGLCREGRLKEANAIIDLMAKQ-GCTLSSHVCNALINGFIKASKIAEALRFFGEMSS 492
Query: 222 VGMSPNLQTYNVLIKIFCKRRRFEKAKGLLDWMQSRGFRPDLVTY 356
SP + TYNVLI CK RF A L++ M +G+ PD++TY
Sbjct: 493 RNCSPTVVTYNVLIDGLCKAERFGDAYKLVEDMLQKGWTPDMITY 537
>ref|XP_006363054.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like isoform X1 [Solanum tuberosum]
gi|565394822|ref|XP_006363055.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g09060-like isoform X2 [Solanum tuberosum]
Length = 687
Score = 157 bits (396), Expect = 2e-36
Identities = 73/118 (61%), Positives = 94/118 (79%)
Frame = +3
Query: 3 KSQECKCSEDVALSVIKAYSNNSMPEQALDVFQRMGEIFGCDPGIRSYNSLLNAFVKSNQ 182
++Q+C CSEDVAL+VIK Y+ NSM ++A++VFQ M IFGC PG+RS+N+LLNAFV SNQ
Sbjct: 70 QTQKCLCSEDVALTVIKGYAKNSMVDKAMEVFQNMKNIFGCIPGVRSFNTLLNAFVVSNQ 129
Query: 183 WDRAESFFAYFETVGMSPNLQTYNVLIKIFCKRRRFEKAKGLLDWMQSRGFRPDLVTY 356
RAE FF YF T+G+SPNL+TYNVLIK+ CK+ +F+KAK LLDWM PD+ +Y
Sbjct: 130 LSRAELFFKYFGTMGVSPNLETYNVLIKLACKKGQFDKAKELLDWMWESKLMPDVYSY 187
Score = 60.8 bits (146), Expect = 2e-07
Identities = 34/105 (32%), Positives = 54/105 (51%)
Frame = +3
Query: 42 SVIKAYSNNSMPEQALDVFQRMGEIFGCDPGIRSYNSLLNAFVKSNQWDRAESFFAYFET 221
S++K ++A + M + GC N+L+N F+K+++ A FF +
Sbjct: 434 SIVKGLCREGRLKEANAIIDLMAKQ-GCTLSSHVCNALINGFIKASKIAEALRFFGEMSS 492
Query: 222 VGMSPNLQTYNVLIKIFCKRRRFEKAKGLLDWMQSRGFRPDLVTY 356
SP + TYNVLI CK RF A L++ M +G+ PD++TY
Sbjct: 493 RNCSPTVVTYNVLIDGLCKAERFGDAYKLVEDMLQKGWTPDMITY 537
>ref|XP_007140387.1| hypothetical protein PHAVU_008G107400g, partial [Phaseolus
vulgaris] gi|561013520|gb|ESW12381.1| hypothetical
protein PHAVU_008G107400g, partial [Phaseolus vulgaris]
Length = 652
Score = 155 bits (393), Expect = 4e-36
Identities = 69/117 (58%), Positives = 89/117 (76%)
Frame = +3
Query: 6 SQECKCSEDVALSVIKAYSNNSMPEQALDVFQRMGEIFGCDPGIRSYNSLLNAFVKSNQW 185
S C+C E+V L+++KAY+ N MP++AL VFQ M +FGC P + S+N+LLNAFV+SNQW
Sbjct: 50 SIRCRCPEEVPLTLLKAYAKNRMPDEALHVFQTMPHVFGCTPTVLSFNTLLNAFVESNQW 109
Query: 186 DRAESFFAYFETVGMSPNLQTYNVLIKIFCKRRRFEKAKGLLDWMQSRGFRPDLVTY 356
RAE FF YFE +SPN++TYNVL K+ CK+R+FEKA+GLL WM G PD VTY
Sbjct: 110 ARAEDFFKYFEAARVSPNVETYNVLTKLLCKKRKFEKARGLLTWMSDAGLIPDKVTY 166
Score = 56.2 bits (134), Expect = 5e-06
Identities = 32/104 (30%), Positives = 54/104 (51%)
Frame = +3
Query: 42 SVIKAYSNNSMPEQALDVFQRMGEIFGCDPGIRSYNSLLNAFVKSNQWDRAESFFAYFET 221
S+IKA ++ V + M + GC + N L++ FVK ++ D A F
Sbjct: 401 SMIKALCKEGRLDEVSGVVELMNKR-GCQLNLYVCNVLIDGFVKHSKLDSAVKAFREMSR 459
Query: 222 VGMSPNLQTYNVLIKIFCKRRRFEKAKGLLDWMQSRGFRPDLVT 353
G SPN+ +YN+LI + RF +A ++ M +G++PD++T
Sbjct: 460 KGCSPNVVSYNILINGLLRAGRFPEASDYVNEMLQKGWKPDIIT 503