BLASTX nr result

ID: Sinomenium21_contig00036569 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00036569
         (377 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thal...    58   2e-06

>gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thaliana]
          Length = 629

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 31/89 (34%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
 Frame = +1

Query: 100 RNLSSVSGEKICKPKEQGSLGSRRVKKMNLSEIPRLIWWLALFKKFM*TQ*IRVKYPMDK 279
           R  + VS + ICKPK++G LG R + + N+  + +LIW +      +  +  ++     +
Sbjct: 260 RRKAKVSWDDICKPKQEGGLGLRSLTEANVVSVLKLIWRVTSNDDSLWVKWSKMNLLKQE 319

Query: 280 SLSSFPVNKN-ASWVFKKMLKYREKVEPF 363
           S  S   N +  SW++KKMLKYRE  +PF
Sbjct: 320 SFWSLTPNSSLGSWMWKKMLKYRETAKPF 348


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