BLASTX nr result
ID: Sinomenium21_contig00036529
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00036529
(260 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006858910.1| hypothetical protein AMTR_s00068p00034280 [A... 110 3e-22
ref|XP_004970292.1| PREDICTED: DNA-directed RNA polymerases I, I... 110 3e-22
ref|XP_003564430.1| PREDICTED: DNA-directed RNA polymerases I, I... 110 3e-22
ref|XP_006644871.1| PREDICTED: DNA-directed RNA polymerases II a... 108 6e-22
ref|XP_006353289.1| PREDICTED: DNA-directed RNA polymerases II a... 108 6e-22
gb|EEE55548.1| hypothetical protein OsJ_03801 [Oryza sativa Japo... 108 6e-22
ref|NP_001141164.1| uncharacterized protein LOC100273250 [Zea ma... 108 6e-22
gb|ACF80672.1| unknown [Zea mays] 108 6e-22
ref|NP_001044564.1| Os01g0805800 [Oryza sativa Japonica Group] g... 108 6e-22
ref|XP_004239999.1| PREDICTED: DNA-directed RNA polymerases I, I... 108 8e-22
ref|XP_006381734.1| DNA-directed RNA polymerase family protein [... 108 8e-22
ref|XP_004161536.1| PREDICTED: DNA-directed RNA polymerases I, I... 108 1e-21
ref|XP_004148944.1| PREDICTED: DNA-directed RNA polymerases I, I... 108 1e-21
dbj|BAK02012.1| predicted protein [Hordeum vulgare subsp. vulgar... 107 1e-21
ref|XP_002514265.1| DNA-directed RNA polymerase II, putative [Ri... 107 2e-21
gb|EYU34199.1| hypothetical protein MIMGU_mgv1a013932mg [Mimulus... 107 2e-21
ref|XP_006355533.1| PREDICTED: DNA-directed RNA polymerases II a... 107 2e-21
ref|XP_006451217.1| hypothetical protein CICLE_v10009504mg [Citr... 107 2e-21
ref|XP_006451215.1| hypothetical protein CICLE_v10009504mg [Citr... 107 2e-21
ref|XP_006406183.1| hypothetical protein EUTSA_v10021534mg [Eutr... 107 2e-21
>ref|XP_006858910.1| hypothetical protein AMTR_s00068p00034280 [Amborella trichopoda]
gi|548863022|gb|ERN20377.1| hypothetical protein
AMTR_s00068p00034280 [Amborella trichopoda]
Length = 206
Score = 110 bits (274), Expect = 3e-22
Identities = 54/54 (100%), Positives = 54/54 (100%)
Frame = -3
Query: 258 KTLLERYTLKETQLPRIQITDPIARYYGLKRGQVVKIIRPSETAGRYVTYRYVV 97
KTLLERYTLKETQLPRIQITDPIARYYGLKRGQVVKIIRPSETAGRYVTYRYVV
Sbjct: 153 KTLLERYTLKETQLPRIQITDPIARYYGLKRGQVVKIIRPSETAGRYVTYRYVV 206
>ref|XP_004970292.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like [Setaria italica]
Length = 210
Score = 110 bits (274), Expect = 3e-22
Identities = 54/54 (100%), Positives = 54/54 (100%)
Frame = -3
Query: 258 KTLLERYTLKETQLPRIQITDPIARYYGLKRGQVVKIIRPSETAGRYVTYRYVV 97
KTLLERYTLKETQLPRIQITDPIARYYGLKRGQVVKIIRPSETAGRYVTYRYVV
Sbjct: 157 KTLLERYTLKETQLPRIQITDPIARYYGLKRGQVVKIIRPSETAGRYVTYRYVV 210
>ref|XP_003564430.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like [Brachypodium distachyon]
Length = 210
Score = 110 bits (274), Expect = 3e-22
Identities = 54/54 (100%), Positives = 54/54 (100%)
Frame = -3
Query: 258 KTLLERYTLKETQLPRIQITDPIARYYGLKRGQVVKIIRPSETAGRYVTYRYVV 97
KTLLERYTLKETQLPRIQITDPIARYYGLKRGQVVKIIRPSETAGRYVTYRYVV
Sbjct: 157 KTLLERYTLKETQLPRIQITDPIARYYGLKRGQVVKIIRPSETAGRYVTYRYVV 210
>ref|XP_006644871.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Oryza brachyantha]
Length = 210
Score = 108 bits (271), Expect = 6e-22
Identities = 53/54 (98%), Positives = 54/54 (100%)
Frame = -3
Query: 258 KTLLERYTLKETQLPRIQITDPIARYYGLKRGQVVKIIRPSETAGRYVTYRYVV 97
KTLLERYTLKETQLPRIQITDPIARYYGL+RGQVVKIIRPSETAGRYVTYRYVV
Sbjct: 157 KTLLERYTLKETQLPRIQITDPIARYYGLRRGQVVKIIRPSETAGRYVTYRYVV 210
>ref|XP_006353289.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Solanum tuberosum]
Length = 206
Score = 108 bits (271), Expect = 6e-22
Identities = 53/54 (98%), Positives = 54/54 (100%)
Frame = -3
Query: 258 KTLLERYTLKETQLPRIQITDPIARYYGLKRGQVVKIIRPSETAGRYVTYRYVV 97
KTLLERYT+KETQLPRIQITDPIARYYGLKRGQVVKIIRPSETAGRYVTYRYVV
Sbjct: 153 KTLLERYTVKETQLPRIQITDPIARYYGLKRGQVVKIIRPSETAGRYVTYRYVV 206
>gb|EEE55548.1| hypothetical protein OsJ_03801 [Oryza sativa Japonica Group]
Length = 210
Score = 108 bits (271), Expect = 6e-22
Identities = 53/54 (98%), Positives = 54/54 (100%)
Frame = -3
Query: 258 KTLLERYTLKETQLPRIQITDPIARYYGLKRGQVVKIIRPSETAGRYVTYRYVV 97
KTLLERYTLKETQLPRIQITDPIARYYGL+RGQVVKIIRPSETAGRYVTYRYVV
Sbjct: 157 KTLLERYTLKETQLPRIQITDPIARYYGLRRGQVVKIIRPSETAGRYVTYRYVV 210
>ref|NP_001141164.1| uncharacterized protein LOC100273250 [Zea mays]
gi|226533456|ref|NP_001152590.1| DNA-directed RNA
polymerases II 24 kDa polypeptide [Zea mays]
gi|194703030|gb|ACF85599.1| unknown [Zea mays]
gi|195657875|gb|ACG48405.1| DNA-directed RNA polymerases
II 24 kDa polypeptide [Zea mays]
gi|413952167|gb|AFW84816.1| DNA-directed RNA polymerase
II polypeptide [Zea mays]
Length = 210
Score = 108 bits (271), Expect = 6e-22
Identities = 53/54 (98%), Positives = 54/54 (100%)
Frame = -3
Query: 258 KTLLERYTLKETQLPRIQITDPIARYYGLKRGQVVKIIRPSETAGRYVTYRYVV 97
KTLLERYTLKETQLPRIQITDPIARYYGL+RGQVVKIIRPSETAGRYVTYRYVV
Sbjct: 157 KTLLERYTLKETQLPRIQITDPIARYYGLRRGQVVKIIRPSETAGRYVTYRYVV 210
>gb|ACF80672.1| unknown [Zea mays]
Length = 127
Score = 108 bits (271), Expect = 6e-22
Identities = 53/54 (98%), Positives = 54/54 (100%)
Frame = -3
Query: 258 KTLLERYTLKETQLPRIQITDPIARYYGLKRGQVVKIIRPSETAGRYVTYRYVV 97
KTLLERYTLKETQLPRIQITDPIARYYGL+RGQVVKIIRPSETAGRYVTYRYVV
Sbjct: 74 KTLLERYTLKETQLPRIQITDPIARYYGLRRGQVVKIIRPSETAGRYVTYRYVV 127
>ref|NP_001044564.1| Os01g0805800 [Oryza sativa Japonica Group]
gi|55296830|dbj|BAD68174.1| putative DNA-directed RNA
polymerase II 23K chain [Oryza sativa Japonica Group]
gi|113534095|dbj|BAF06478.1| Os01g0805800 [Oryza sativa
Japonica Group] gi|215737136|dbj|BAG96065.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|215765546|dbj|BAG87243.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|218189238|gb|EEC71665.1| hypothetical protein
OsI_04128 [Oryza sativa Indica Group]
Length = 210
Score = 108 bits (271), Expect = 6e-22
Identities = 53/54 (98%), Positives = 54/54 (100%)
Frame = -3
Query: 258 KTLLERYTLKETQLPRIQITDPIARYYGLKRGQVVKIIRPSETAGRYVTYRYVV 97
KTLLERYTLKETQLPRIQITDPIARYYGL+RGQVVKIIRPSETAGRYVTYRYVV
Sbjct: 157 KTLLERYTLKETQLPRIQITDPIARYYGLRRGQVVKIIRPSETAGRYVTYRYVV 210
>ref|XP_004239999.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like isoform 1 [Solanum lycopersicum]
gi|460388693|ref|XP_004240000.1| PREDICTED: DNA-directed
RNA polymerases I, II, and III subunit RPABC1-like
isoform 2 [Solanum lycopersicum]
Length = 206
Score = 108 bits (270), Expect = 8e-22
Identities = 52/54 (96%), Positives = 54/54 (100%)
Frame = -3
Query: 258 KTLLERYTLKETQLPRIQITDPIARYYGLKRGQVVKIIRPSETAGRYVTYRYVV 97
KTLLERYT+KETQLPRIQITDPIARYYGLKRGQVVKIIRPSETAGRY+TYRYVV
Sbjct: 153 KTLLERYTVKETQLPRIQITDPIARYYGLKRGQVVKIIRPSETAGRYITYRYVV 206
>ref|XP_006381734.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
gi|550336487|gb|ERP59531.1| DNA-directed RNA polymerase
family protein [Populus trichocarpa]
Length = 206
Score = 108 bits (270), Expect = 8e-22
Identities = 52/54 (96%), Positives = 54/54 (100%)
Frame = -3
Query: 258 KTLLERYTLKETQLPRIQITDPIARYYGLKRGQVVKIIRPSETAGRYVTYRYVV 97
KTLLERYT+KETQLPRIQITDPIARYYGLKRGQVVKIIRPSETAGRYVTYRYV+
Sbjct: 153 KTLLERYTVKETQLPRIQITDPIARYYGLKRGQVVKIIRPSETAGRYVTYRYVI 206
>ref|XP_004161536.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like [Cucumis sativus]
Length = 208
Score = 108 bits (269), Expect = 1e-21
Identities = 51/54 (94%), Positives = 54/54 (100%)
Frame = -3
Query: 258 KTLLERYTLKETQLPRIQITDPIARYYGLKRGQVVKIIRPSETAGRYVTYRYVV 97
KTLLERYT+KETQLPRIQ+TDP+ARYYGLKRGQVVKIIRPSETAGRYVTYRYVV
Sbjct: 155 KTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRYVV 208
>ref|XP_004148944.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like [Cucumis sativus]
Length = 207
Score = 108 bits (269), Expect = 1e-21
Identities = 51/54 (94%), Positives = 54/54 (100%)
Frame = -3
Query: 258 KTLLERYTLKETQLPRIQITDPIARYYGLKRGQVVKIIRPSETAGRYVTYRYVV 97
KTLLERYT+KETQLPRIQ+TDP+ARYYGLKRGQVVKIIRPSETAGRYVTYRYVV
Sbjct: 154 KTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRYVV 207
>dbj|BAK02012.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326504136|dbj|BAK02854.1| predicted protein [Hordeum
vulgare subsp. vulgare] gi|326511589|dbj|BAJ91939.1|
predicted protein [Hordeum vulgare subsp. vulgare]
Length = 210
Score = 107 bits (268), Expect = 1e-21
Identities = 53/54 (98%), Positives = 53/54 (98%)
Frame = -3
Query: 258 KTLLERYTLKETQLPRIQITDPIARYYGLKRGQVVKIIRPSETAGRYVTYRYVV 97
KTLL RYTLKETQLPRIQITDPIARYYGLKRGQVVKIIRPSETAGRYVTYRYVV
Sbjct: 157 KTLLARYTLKETQLPRIQITDPIARYYGLKRGQVVKIIRPSETAGRYVTYRYVV 210
>ref|XP_002514265.1| DNA-directed RNA polymerase II, putative [Ricinus communis]
gi|223546721|gb|EEF48219.1| DNA-directed RNA polymerase
II, putative [Ricinus communis]
Length = 225
Score = 107 bits (267), Expect = 2e-21
Identities = 52/54 (96%), Positives = 54/54 (100%)
Frame = -3
Query: 258 KTLLERYTLKETQLPRIQITDPIARYYGLKRGQVVKIIRPSETAGRYVTYRYVV 97
KTLLERYT+KETQLPRIQI+DPIARYYGLKRGQVVKIIRPSETAGRYVTYRYVV
Sbjct: 172 KTLLERYTVKETQLPRIQISDPIARYYGLKRGQVVKIIRPSETAGRYVTYRYVV 225
>gb|EYU34199.1| hypothetical protein MIMGU_mgv1a013932mg [Mimulus guttatus]
Length = 206
Score = 107 bits (266), Expect = 2e-21
Identities = 52/54 (96%), Positives = 53/54 (98%)
Frame = -3
Query: 258 KTLLERYTLKETQLPRIQITDPIARYYGLKRGQVVKIIRPSETAGRYVTYRYVV 97
KTLLERYT+KETQLPRIQITDPIARYYGLKRG VVKIIRPSETAGRYVTYRYVV
Sbjct: 153 KTLLERYTVKETQLPRIQITDPIARYYGLKRGHVVKIIRPSETAGRYVTYRYVV 206
>ref|XP_006355533.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Solanum tuberosum]
Length = 206
Score = 107 bits (266), Expect = 2e-21
Identities = 51/54 (94%), Positives = 54/54 (100%)
Frame = -3
Query: 258 KTLLERYTLKETQLPRIQITDPIARYYGLKRGQVVKIIRPSETAGRYVTYRYVV 97
K+LLERYT+KETQLPRIQITDPIARYYGLKRGQVVKIIRPSETAGRY+TYRYVV
Sbjct: 153 KSLLERYTVKETQLPRIQITDPIARYYGLKRGQVVKIIRPSETAGRYITYRYVV 206
>ref|XP_006451217.1| hypothetical protein CICLE_v10009504mg [Citrus clementina]
gi|557554443|gb|ESR64457.1| hypothetical protein
CICLE_v10009504mg [Citrus clementina]
Length = 146
Score = 107 bits (266), Expect = 2e-21
Identities = 51/54 (94%), Positives = 54/54 (100%)
Frame = -3
Query: 258 KTLLERYTLKETQLPRIQITDPIARYYGLKRGQVVKIIRPSETAGRYVTYRYVV 97
KTLL+RYT+KETQLPRIQ+TDPIARYYGLKRGQVVKIIRPSETAGRYVTYRYVV
Sbjct: 93 KTLLKRYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRYVTYRYVV 146
>ref|XP_006451215.1| hypothetical protein CICLE_v10009504mg [Citrus clementina]
gi|567918420|ref|XP_006451216.1| hypothetical protein
CICLE_v10009504mg [Citrus clementina]
gi|568843556|ref|XP_006475670.1| PREDICTED: DNA-directed
RNA polymerases II and IV subunit 5A-like isoform X1
[Citrus sinensis] gi|568843558|ref|XP_006475671.1|
PREDICTED: DNA-directed RNA polymerases II and IV
subunit 5A-like isoform X2 [Citrus sinensis]
gi|568843560|ref|XP_006475672.1| PREDICTED: DNA-directed
RNA polymerases II and IV subunit 5A-like isoform X3
[Citrus sinensis] gi|557554441|gb|ESR64455.1|
hypothetical protein CICLE_v10009504mg [Citrus
clementina] gi|557554442|gb|ESR64456.1| hypothetical
protein CICLE_v10009504mg [Citrus clementina]
Length = 206
Score = 107 bits (266), Expect = 2e-21
Identities = 51/54 (94%), Positives = 54/54 (100%)
Frame = -3
Query: 258 KTLLERYTLKETQLPRIQITDPIARYYGLKRGQVVKIIRPSETAGRYVTYRYVV 97
KTLL+RYT+KETQLPRIQ+TDPIARYYGLKRGQVVKIIRPSETAGRYVTYRYVV
Sbjct: 153 KTLLKRYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRYVTYRYVV 206
>ref|XP_006406183.1| hypothetical protein EUTSA_v10021534mg [Eutrema salsugineum]
gi|557107329|gb|ESQ47636.1| hypothetical protein
EUTSA_v10021534mg [Eutrema salsugineum]
Length = 206
Score = 107 bits (266), Expect = 2e-21
Identities = 51/54 (94%), Positives = 54/54 (100%)
Frame = -3
Query: 258 KTLLERYTLKETQLPRIQITDPIARYYGLKRGQVVKIIRPSETAGRYVTYRYVV 97
KTLLERYT+KETQLPRIQ+TDPIARY+GLKRGQVVKIIRPSETAGRYVTYRYVV
Sbjct: 153 KTLLERYTVKETQLPRIQVTDPIARYFGLKRGQVVKIIRPSETAGRYVTYRYVV 206