BLASTX nr result

ID: Sinomenium21_contig00036456 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00036456
         (384 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN70693.1| hypothetical protein VITISV_041975 [Vitis vinifera]    52   2e-06

>emb|CAN70693.1| hypothetical protein VITISV_041975 [Vitis vinifera]
          Length = 1795

 Score = 51.6 bits (122), Expect(2) = 2e-06
 Identities = 29/57 (50%), Positives = 37/57 (64%), Gaps = 3/57 (5%)
 Frame = +1

Query: 223 ALGSLGCSFSYKSFFALLIGGNS---FPPSTFIWCSIVSSKVQVLGWLVAHSRINTN 384
           +L S G SFS KSFF  L   ++   F P+ F+W S V SKV+ L WLVAH ++NTN
Sbjct: 117 SLSSSG-SFSVKSFFYALSKDSNPLMFLPAKFLWSSKVPSKVKALAWLVAHGKVNTN 172



 Score = 25.8 bits (55), Expect(2) = 2e-06
 Identities = 20/78 (25%), Positives = 29/78 (37%), Gaps = 1/78 (1%)
 Frame = +2

Query: 20  LCTGYDDLHSK-PVTNFIVSRFSQGDTYLEWNLHFPKNIKNMXXXXXXXXXXXXXRVRIQ 196
           LC  + +L+    V N IVS        L WN +F +N+ +               V + 
Sbjct: 48  LCAQFAELYRVISVRNLIVSNVLGNSFPLSWNFNFCRNLTDSEIDLLQRLMSSLQSVLLS 107

Query: 197 SPAIDRRI*PLDPSGVLS 250
             + D R   L  SG  S
Sbjct: 108 PSSSDSRAWSLSSSGSFS 125


Top