BLASTX nr result
ID: Sinomenium21_contig00036151
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00036151
(512 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003634352.1| PREDICTED: RNA pseudourine synthase 2, chlor... 191 9e-47
ref|XP_004238386.1| PREDICTED: RNA pseudourine synthase 2, chlor... 185 6e-45
ref|XP_006342081.1| PREDICTED: RNA pseudouridine synthase 2, chl... 182 3e-44
ref|XP_002301949.1| pseudouridine synthase family protein [Popul... 180 2e-43
ref|XP_004161095.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudour... 180 2e-43
ref|XP_004143077.1| PREDICTED: RNA pseudourine synthase 2, chlor... 180 2e-43
gb|EYU17563.1| hypothetical protein MIMGU_mgv1a006781mg [Mimulus... 177 1e-42
gb|EYU17562.1| hypothetical protein MIMGU_mgv1a006781mg [Mimulus... 177 1e-42
ref|XP_006390244.1| hypothetical protein EUTSA_v10018588mg [Eutr... 175 5e-42
ref|XP_007017901.1| Pseudouridine synthase family protein isofor... 175 7e-42
ref|XP_007017900.1| Pseudouridine synthase family protein isofor... 175 7e-42
ref|XP_006302277.1| hypothetical protein CARUB_v10020321mg [Caps... 174 9e-42
gb|EXB81509.1| RNA pseudourine synthase 2 [Morus notabilis] 174 1e-41
ref|XP_006435255.1| hypothetical protein CICLE_v10001736mg [Citr... 174 1e-41
ref|XP_006435254.1| hypothetical protein CICLE_v10001736mg [Citr... 174 1e-41
ref|XP_002887624.1| T4O12.25 [Arabidopsis lyrata subsp. lyrata] ... 174 1e-41
ref|XP_006473714.1| PREDICTED: RNA pseudouridine synthase 2, chl... 174 1e-41
ref|NP_177732.2| RNA pseudourine synthase 2 [Arabidopsis thalian... 174 1e-41
ref|NP_974151.1| RNA pseudourine synthase 2 [Arabidopsis thalian... 174 1e-41
ref|XP_002519370.1| ribosomal pseudouridine synthase, putative [... 172 6e-41
>ref|XP_003634352.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like [Vitis
vinifera] gi|302141717|emb|CBI18920.3| unnamed protein
product [Vitis vinifera]
Length = 433
Score = 191 bits (485), Expect = 9e-47
Identities = 110/168 (65%), Positives = 121/168 (72%), Gaps = 4/168 (2%)
Frame = +3
Query: 21 SASTKSFCYSS-SLNFIPRRPRSYSRVCKIPXXXXXXXXXXXXXXXXKGPLTGRLLNFAG 197
SAS S ++S S PR P+S SRV +I ++GR N+AG
Sbjct: 7 SASFFSISHTSQSALLFPRNPKSCSRVFRILRACSNSTDEPLVS------VSGRRTNYAG 60
Query: 198 VRLEETV---EKGSQKSRLDSWVSSRIQGVSRARVQSSIRAGLVSVNGRVVDKVSQVIRP 368
VRLEETV S K RLDSW+SSRI G+SRARVQSSIR+GLVSVN R+VDKVS VIR
Sbjct: 61 VRLEETVVDVNSDSGKLRLDSWISSRIIGISRARVQSSIRSGLVSVNDRIVDKVSHVIRA 120
Query: 369 GDKVNCTISELQPLRAEPEDIPLDIVYEDAHVLVVNKPAHMVVHPAPG 512
GDKVNCTISELQPLRAEPEDIPLDIVYED HVLVVNKPAHMVVHPAPG
Sbjct: 121 GDKVNCTISELQPLRAEPEDIPLDIVYEDEHVLVVNKPAHMVVHPAPG 168
>ref|XP_004238386.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like [Solanum
lycopersicum]
Length = 436
Score = 185 bits (469), Expect = 6e-45
Identities = 96/157 (61%), Positives = 116/157 (73%), Gaps = 2/157 (1%)
Frame = +3
Query: 48 SSSLNFIPRRPR--SYSRVCKIPXXXXXXXXXXXXXXXXKGPLTGRLLNFAGVRLEETVE 221
++S + +P+ P+ S SRV + GR N++GV+LEETV+
Sbjct: 6 TTSFSLLPQNPKPISLSRVSSFICRAFTKFPGDSDSDDSPDEIPGRRSNYSGVKLEETVD 65
Query: 222 KGSQKSRLDSWVSSRIQGVSRARVQSSIRAGLVSVNGRVVDKVSQVIRPGDKVNCTISEL 401
+ K RLDSWVSSRI GVSRARVQSSIR+GLVSVNGRV DKVS +++ GDKV+CTI++L
Sbjct: 66 SKTGKLRLDSWVSSRIDGVSRARVQSSIRSGLVSVNGRVTDKVSHMVKGGDKVDCTIADL 125
Query: 402 QPLRAEPEDIPLDIVYEDAHVLVVNKPAHMVVHPAPG 512
+PLRAEPEDIPLDIVYED HVLVVNKPAHMVVHPAPG
Sbjct: 126 KPLRAEPEDIPLDIVYEDEHVLVVNKPAHMVVHPAPG 162
>ref|XP_006342081.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic-like
[Solanum tuberosum]
Length = 431
Score = 182 bits (463), Expect = 3e-44
Identities = 95/157 (60%), Positives = 116/157 (73%), Gaps = 2/157 (1%)
Frame = +3
Query: 48 SSSLNFIPRRPR--SYSRVCKIPXXXXXXXXXXXXXXXXKGPLTGRLLNFAGVRLEETVE 221
++S + +P+ P+ S SRV + GR N++GV+LEETV+
Sbjct: 6 TTSFSLLPQNPKPFSLSRVSSFICRAFTKFPGDSDSDDSPDEIPGRRSNYSGVKLEETVD 65
Query: 222 KGSQKSRLDSWVSSRIQGVSRARVQSSIRAGLVSVNGRVVDKVSQVIRPGDKVNCTISEL 401
+ K RLDSWVSSRI GVSRARVQSSIR+GLVSVNGRV DKVS +++ GDKV+CTI++L
Sbjct: 66 GKTGKLRLDSWVSSRIDGVSRARVQSSIRSGLVSVNGRVTDKVSHMVKGGDKVDCTIADL 125
Query: 402 QPLRAEPEDIPLDIVYEDAHVLVVNKPAHMVVHPAPG 512
+PLRAEPEDIPLDIV+ED HVLVVNKPAHMVVHPAPG
Sbjct: 126 KPLRAEPEDIPLDIVFEDEHVLVVNKPAHMVVHPAPG 162
>ref|XP_002301949.1| pseudouridine synthase family protein [Populus trichocarpa]
gi|222843675|gb|EEE81222.1| pseudouridine synthase
family protein [Populus trichocarpa]
Length = 444
Score = 180 bits (457), Expect = 2e-43
Identities = 86/113 (76%), Positives = 103/113 (91%)
Frame = +3
Query: 174 GRLLNFAGVRLEETVEKGSQKSRLDSWVSSRIQGVSRARVQSSIRAGLVSVNGRVVDKVS 353
G+ +N++GV+LEE+V+ S KSRLDSW+SSRI G+SRARVQSSI++GLVSVNG+V+DKVS
Sbjct: 73 GQRINYSGVKLEESVDSKSGKSRLDSWISSRISGISRARVQSSIKSGLVSVNGKVIDKVS 132
Query: 354 QVIRPGDKVNCTISELQPLRAEPEDIPLDIVYEDAHVLVVNKPAHMVVHPAPG 512
++ GDKVNC ISELQPLRAEPE+IPLDIVYED +VLVVNKPAHMVVHPAPG
Sbjct: 133 HNVKAGDKVNCVISELQPLRAEPENIPLDIVYEDENVLVVNKPAHMVVHPAPG 185
>ref|XP_004161095.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudourine synthase 2,
chloroplastic-like [Cucumis sativus]
Length = 452
Score = 180 bits (456), Expect = 2e-43
Identities = 88/112 (78%), Positives = 97/112 (86%)
Frame = +3
Query: 177 RLLNFAGVRLEETVEKGSQKSRLDSWVSSRIQGVSRARVQSSIRAGLVSVNGRVVDKVSQ 356
R+ N+AG RLEETV+ K RLDSW+S RI G+SRARVQSSIRAGLVSVNGRV+DKVS
Sbjct: 57 RIANYAGTRLEETVDVNPGKVRLDSWISCRINGISRARVQSSIRAGLVSVNGRVIDKVSH 116
Query: 357 VIRPGDKVNCTISELQPLRAEPEDIPLDIVYEDAHVLVVNKPAHMVVHPAPG 512
++ GD +NCTISELQPLRAEPEDI LDIVYED HVLVVNKPAHMVVHPAPG
Sbjct: 117 NVKAGDVINCTISELQPLRAEPEDIDLDIVYEDEHVLVVNKPAHMVVHPAPG 168
>ref|XP_004143077.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like [Cucumis
sativus]
Length = 453
Score = 180 bits (456), Expect = 2e-43
Identities = 88/112 (78%), Positives = 97/112 (86%)
Frame = +3
Query: 177 RLLNFAGVRLEETVEKGSQKSRLDSWVSSRIQGVSRARVQSSIRAGLVSVNGRVVDKVSQ 356
R+ N+AG RLEETV+ K RLDSW+S RI G+SRARVQSSIRAGLVSVNGRV+DKVS
Sbjct: 57 RIANYAGTRLEETVDVNPGKVRLDSWISCRINGISRARVQSSIRAGLVSVNGRVIDKVSH 116
Query: 357 VIRPGDKVNCTISELQPLRAEPEDIPLDIVYEDAHVLVVNKPAHMVVHPAPG 512
++ GD +NCTISELQPLRAEPEDI LDIVYED HVLVVNKPAHMVVHPAPG
Sbjct: 117 NVKAGDVINCTISELQPLRAEPEDIDLDIVYEDEHVLVVNKPAHMVVHPAPG 168
>gb|EYU17563.1| hypothetical protein MIMGU_mgv1a006781mg [Mimulus guttatus]
Length = 422
Score = 177 bits (449), Expect = 1e-42
Identities = 86/115 (74%), Positives = 100/115 (86%)
Frame = +3
Query: 168 LTGRLLNFAGVRLEETVEKGSQKSRLDSWVSSRIQGVSRARVQSSIRAGLVSVNGRVVDK 347
++GR NF+G ++EETV S K R+DSW+SSRI G+SRARVQSSIR+GLVSVNG V+ K
Sbjct: 52 ISGRPNNFSGHKIEETVALDSAKLRVDSWISSRINGISRARVQSSIRSGLVSVNGHVISK 111
Query: 348 VSQVIRPGDKVNCTISELQPLRAEPEDIPLDIVYEDAHVLVVNKPAHMVVHPAPG 512
VS V+R GD VNCTI+ELQPLRAEPE+IPLDIVYED H+LVVNKPAHMVVHPAPG
Sbjct: 112 VSHVVRDGDSVNCTIAELQPLRAEPENIPLDIVYEDDHLLVVNKPAHMVVHPAPG 166
>gb|EYU17562.1| hypothetical protein MIMGU_mgv1a006781mg [Mimulus guttatus]
Length = 432
Score = 177 bits (449), Expect = 1e-42
Identities = 86/115 (74%), Positives = 100/115 (86%)
Frame = +3
Query: 168 LTGRLLNFAGVRLEETVEKGSQKSRLDSWVSSRIQGVSRARVQSSIRAGLVSVNGRVVDK 347
++GR NF+G ++EETV S K R+DSW+SSRI G+SRARVQSSIR+GLVSVNG V+ K
Sbjct: 52 ISGRPNNFSGHKIEETVALDSAKLRVDSWISSRINGISRARVQSSIRSGLVSVNGHVISK 111
Query: 348 VSQVIRPGDKVNCTISELQPLRAEPEDIPLDIVYEDAHVLVVNKPAHMVVHPAPG 512
VS V+R GD VNCTI+ELQPLRAEPE+IPLDIVYED H+LVVNKPAHMVVHPAPG
Sbjct: 112 VSHVVRDGDSVNCTIAELQPLRAEPENIPLDIVYEDDHLLVVNKPAHMVVHPAPG 166
>ref|XP_006390244.1| hypothetical protein EUTSA_v10018588mg [Eutrema salsugineum]
gi|557086678|gb|ESQ27530.1| hypothetical protein
EUTSA_v10018588mg [Eutrema salsugineum]
Length = 432
Score = 175 bits (444), Expect = 5e-42
Identities = 88/111 (79%), Positives = 99/111 (89%), Gaps = 1/111 (0%)
Frame = +3
Query: 183 LNFAGVRLEETVEKGSQ-KSRLDSWVSSRIQGVSRARVQSSIRAGLVSVNGRVVDKVSQV 359
+N AG++LEETVE + K RLDSW+SSR+ GVSRARVQSSIR GLVSVNGRVVDKVS
Sbjct: 64 VNNAGLKLEETVEAAVKAKIRLDSWISSRVHGVSRARVQSSIRLGLVSVNGRVVDKVSHN 123
Query: 360 IRPGDKVNCTISELQPLRAEPEDIPLDIVYEDAHVLVVNKPAHMVVHPAPG 512
++ GD+VNCTISELQPL+AEPEDIPLDIVYED H+LVVNKPAHMVVHPAPG
Sbjct: 124 VKAGDEVNCTISELQPLKAEPEDIPLDIVYEDKHLLVVNKPAHMVVHPAPG 174
>ref|XP_007017901.1| Pseudouridine synthase family protein isoform 2, partial [Theobroma
cacao] gi|508723229|gb|EOY15126.1| Pseudouridine
synthase family protein isoform 2, partial [Theobroma
cacao]
Length = 409
Score = 175 bits (443), Expect = 7e-42
Identities = 88/110 (80%), Positives = 98/110 (89%), Gaps = 1/110 (0%)
Frame = +3
Query: 186 NFAGVRLEETVEKGSQ-KSRLDSWVSSRIQGVSRARVQSSIRAGLVSVNGRVVDKVSQVI 362
++ GV+LEETV+ Q K RLDSW+SSRIQG+SRARVQSSI++GLV+VNGRVVDKVS +
Sbjct: 49 SYTGVQLEETVDGTKQGKLRLDSWISSRIQGISRARVQSSIKSGLVTVNGRVVDKVSHGL 108
Query: 363 RPGDKVNCTISELQPLRAEPEDIPLDIVYEDAHVLVVNKPAHMVVHPAPG 512
R GDKVNC ISELQPLRAEPEDIPLDIVYED HVLVVNKP HMVVHPAPG
Sbjct: 109 RHGDKVNCVISELQPLRAEPEDIPLDIVYEDDHVLVVNKPPHMVVHPAPG 158
>ref|XP_007017900.1| Pseudouridine synthase family protein isoform 1 [Theobroma cacao]
gi|508723228|gb|EOY15125.1| Pseudouridine synthase
family protein isoform 1 [Theobroma cacao]
Length = 433
Score = 175 bits (443), Expect = 7e-42
Identities = 88/110 (80%), Positives = 98/110 (89%), Gaps = 1/110 (0%)
Frame = +3
Query: 186 NFAGVRLEETVEKGSQ-KSRLDSWVSSRIQGVSRARVQSSIRAGLVSVNGRVVDKVSQVI 362
++ GV+LEETV+ Q K RLDSW+SSRIQG+SRARVQSSI++GLV+VNGRVVDKVS +
Sbjct: 62 SYTGVQLEETVDGTKQGKLRLDSWISSRIQGISRARVQSSIKSGLVTVNGRVVDKVSHGL 121
Query: 363 RPGDKVNCTISELQPLRAEPEDIPLDIVYEDAHVLVVNKPAHMVVHPAPG 512
R GDKVNC ISELQPLRAEPEDIPLDIVYED HVLVVNKP HMVVHPAPG
Sbjct: 122 RHGDKVNCVISELQPLRAEPEDIPLDIVYEDDHVLVVNKPPHMVVHPAPG 171
>ref|XP_006302277.1| hypothetical protein CARUB_v10020321mg [Capsella rubella]
gi|482570987|gb|EOA35175.1| hypothetical protein
CARUB_v10020321mg [Capsella rubella]
Length = 432
Score = 174 bits (442), Expect = 9e-42
Identities = 87/110 (79%), Positives = 97/110 (88%)
Frame = +3
Query: 183 LNFAGVRLEETVEKGSQKSRLDSWVSSRIQGVSRARVQSSIRAGLVSVNGRVVDKVSQVI 362
+N AG+R+EETV+ K RLDSW+SSRI GVSRARVQSSIR GLV+VNGRVVDKVS +
Sbjct: 64 VNNAGLRIEETVDDLKGKIRLDSWISSRINGVSRARVQSSIRLGLVTVNGRVVDKVSHNV 123
Query: 363 RPGDKVNCTISELQPLRAEPEDIPLDIVYEDAHVLVVNKPAHMVVHPAPG 512
+ GD+VNCTISELQPL+AE EDIPLDIVYED HVLVVNKPAHMVVHPAPG
Sbjct: 124 KAGDEVNCTISELQPLKAEAEDIPLDIVYEDKHVLVVNKPAHMVVHPAPG 173
>gb|EXB81509.1| RNA pseudourine synthase 2 [Morus notabilis]
Length = 369
Score = 174 bits (441), Expect = 1e-41
Identities = 101/180 (56%), Positives = 120/180 (66%), Gaps = 11/180 (6%)
Frame = +3
Query: 6 TMLSLSASTKSFCYSSSLN--FIPRRPR-------SYSRVCKIPXXXXXXXXXXXXXXXX 158
++ LS+STK+F S SL F+P PR S+ +IP
Sbjct: 3 SLSGLSSSTKAFLSSPSLFLFFLPPNPRISASSSFSFQSPPRIPISFRAGSSFTGASISD 62
Query: 159 KGP--LTGRLLNFAGVRLEETVEKGSQKSRLDSWVSSRIQGVSRARVQSSIRAGLVSVNG 332
+ L G NFAGVRLE TV S K RLDSW+SSR+ G+SRARVQSSIR GLV VNG
Sbjct: 63 RNEEVLAGVRPNFAGVRLEATVAVDSGKVRLDSWISSRVSGISRARVQSSIRLGLVRVNG 122
Query: 333 RVVDKVSQVIRPGDKVNCTISELQPLRAEPEDIPLDIVYEDAHVLVVNKPAHMVVHPAPG 512
+VVDKVSQ ++ GDK++CTISELQPL+AE EDIPL+IV+ED VLVVNKP HMVVHPAPG
Sbjct: 123 QVVDKVSQNVKTGDKIDCTISELQPLKAEAEDIPLEIVHEDDSVLVVNKPPHMVVHPAPG 182
>ref|XP_006435255.1| hypothetical protein CICLE_v10001736mg [Citrus clementina]
gi|557537377|gb|ESR48495.1| hypothetical protein
CICLE_v10001736mg [Citrus clementina]
Length = 341
Score = 174 bits (441), Expect = 1e-41
Identities = 101/170 (59%), Positives = 115/170 (67%), Gaps = 1/170 (0%)
Frame = +3
Query: 6 TMLSL-SASTKSFCYSSSLNFIPRRPRSYSRVCKIPXXXXXXXXXXXXXXXXKGPLTGRL 182
TMLSL SAS S + L F P KIP G +
Sbjct: 2 TMLSLNSASWGSASCTKGLQFSPT---------KIPFGVFKILRARCSSSSSGGNNREPI 52
Query: 183 LNFAGVRLEETVEKGSQKSRLDSWVSSRIQGVSRARVQSSIRAGLVSVNGRVVDKVSQVI 362
N+AGV+LEETV+ + K RLD+W+SSRI G+SRARVQSSIR+GLVSVNG+VV KVS +
Sbjct: 53 ANYAGVQLEETVDTKAGKLRLDAWISSRIDGISRARVQSSIRSGLVSVNGQVVSKVSHNV 112
Query: 363 RPGDKVNCTISELQPLRAEPEDIPLDIVYEDAHVLVVNKPAHMVVHPAPG 512
+ GD VNCTISELQPLRAE EDIPLDIVYED +VLVVNKPAHMVVHPAPG
Sbjct: 113 KGGDMVNCTISELQPLRAEAEDIPLDIVYEDDNVLVVNKPAHMVVHPAPG 162
>ref|XP_006435254.1| hypothetical protein CICLE_v10001736mg [Citrus clementina]
gi|557537376|gb|ESR48494.1| hypothetical protein
CICLE_v10001736mg [Citrus clementina]
Length = 324
Score = 174 bits (441), Expect = 1e-41
Identities = 101/170 (59%), Positives = 115/170 (67%), Gaps = 1/170 (0%)
Frame = +3
Query: 6 TMLSL-SASTKSFCYSSSLNFIPRRPRSYSRVCKIPXXXXXXXXXXXXXXXXKGPLTGRL 182
TMLSL SAS S + L F P KIP G +
Sbjct: 2 TMLSLNSASWGSASCTKGLQFSPT---------KIPFGVFKILRARCSSSSSGGNNREPI 52
Query: 183 LNFAGVRLEETVEKGSQKSRLDSWVSSRIQGVSRARVQSSIRAGLVSVNGRVVDKVSQVI 362
N+AGV+LEETV+ + K RLD+W+SSRI G+SRARVQSSIR+GLVSVNG+VV KVS +
Sbjct: 53 ANYAGVQLEETVDTKAGKLRLDAWISSRIDGISRARVQSSIRSGLVSVNGQVVSKVSHNV 112
Query: 363 RPGDKVNCTISELQPLRAEPEDIPLDIVYEDAHVLVVNKPAHMVVHPAPG 512
+ GD VNCTISELQPLRAE EDIPLDIVYED +VLVVNKPAHMVVHPAPG
Sbjct: 113 KGGDMVNCTISELQPLRAEAEDIPLDIVYEDDNVLVVNKPAHMVVHPAPG 162
>ref|XP_002887624.1| T4O12.25 [Arabidopsis lyrata subsp. lyrata]
gi|297333465|gb|EFH63883.1| T4O12.25 [Arabidopsis lyrata
subsp. lyrata]
Length = 930
Score = 174 bits (441), Expect = 1e-41
Identities = 86/110 (78%), Positives = 97/110 (88%)
Frame = +3
Query: 183 LNFAGVRLEETVEKGSQKSRLDSWVSSRIQGVSRARVQSSIRAGLVSVNGRVVDKVSQVI 362
+N AG+R+EETV+ K RLDSW+SSR+ GVSRARVQSSIR GLV+VNGRVVDKVS +
Sbjct: 566 VNNAGLRIEETVDALKGKIRLDSWISSRVNGVSRARVQSSIRLGLVTVNGRVVDKVSHNV 625
Query: 363 RPGDKVNCTISELQPLRAEPEDIPLDIVYEDAHVLVVNKPAHMVVHPAPG 512
+ GD+VNCTISELQPL+AE EDIPLDIVYED HVLVVNKPAHMVVHPAPG
Sbjct: 626 KAGDEVNCTISELQPLKAEAEDIPLDIVYEDKHVLVVNKPAHMVVHPAPG 675
>ref|XP_006473714.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic-like [Citrus
sinensis]
Length = 421
Score = 174 bits (440), Expect = 1e-41
Identities = 100/170 (58%), Positives = 115/170 (67%), Gaps = 1/170 (0%)
Frame = +3
Query: 6 TMLSL-SASTKSFCYSSSLNFIPRRPRSYSRVCKIPXXXXXXXXXXXXXXXXKGPLTGRL 182
TMLSL SAS S + L F P KIP G +
Sbjct: 2 TMLSLNSASWGSASCTKGLQFSPT---------KIPFGVFKILRARCSSSSSGGNNREPI 52
Query: 183 LNFAGVRLEETVEKGSQKSRLDSWVSSRIQGVSRARVQSSIRAGLVSVNGRVVDKVSQVI 362
N+AGV+LEETV+ + K RLD+W+SSRI G+SRARVQSSIR+GLVS+NG+VV KVS +
Sbjct: 53 ANYAGVQLEETVDTKAGKLRLDAWISSRIDGISRARVQSSIRSGLVSINGQVVSKVSHNV 112
Query: 363 RPGDKVNCTISELQPLRAEPEDIPLDIVYEDAHVLVVNKPAHMVVHPAPG 512
+ GD VNCTISELQPLRAE EDIPLDIVYED +VLVVNKPAHMVVHPAPG
Sbjct: 113 KGGDMVNCTISELQPLRAEAEDIPLDIVYEDDNVLVVNKPAHMVVHPAPG 162
>ref|NP_177732.2| RNA pseudourine synthase 2 [Arabidopsis thaliana]
gi|332197668|gb|AEE35789.1| RNA pseudourine synthase 2
[Arabidopsis thaliana]
Length = 313
Score = 174 bits (440), Expect = 1e-41
Identities = 86/110 (78%), Positives = 96/110 (87%)
Frame = +3
Query: 183 LNFAGVRLEETVEKGSQKSRLDSWVSSRIQGVSRARVQSSIRAGLVSVNGRVVDKVSQVI 362
+N AG+R+EE V+ K RLDSW+SSRI GVSRARVQSSIR GLV+VNGRVVDKVS +
Sbjct: 64 VNNAGLRIEEIVDAAKGKIRLDSWISSRINGVSRARVQSSIRLGLVTVNGRVVDKVSHNV 123
Query: 363 RPGDKVNCTISELQPLRAEPEDIPLDIVYEDAHVLVVNKPAHMVVHPAPG 512
+ GD+VNCTISELQPL+AE EDIPLDIVYED HVLVVNKPAHMVVHPAPG
Sbjct: 124 KSGDEVNCTISELQPLKAEAEDIPLDIVYEDKHVLVVNKPAHMVVHPAPG 173
>ref|NP_974151.1| RNA pseudourine synthase 2 [Arabidopsis thaliana]
gi|122215273|sp|Q3ECD0.1|PUS2_ARATH RecName: Full=RNA
pseudouridine synthase 2, chloroplastic; AltName:
Full=RNA pseudouridylate synthase 2; AltName:
Full=RNA-uridine isomerase 2; Flags: Precursor
gi|332197669|gb|AEE35790.1| RNA pseudourine synthase 2
[Arabidopsis thaliana]
Length = 430
Score = 174 bits (440), Expect = 1e-41
Identities = 86/110 (78%), Positives = 96/110 (87%)
Frame = +3
Query: 183 LNFAGVRLEETVEKGSQKSRLDSWVSSRIQGVSRARVQSSIRAGLVSVNGRVVDKVSQVI 362
+N AG+R+EE V+ K RLDSW+SSRI GVSRARVQSSIR GLV+VNGRVVDKVS +
Sbjct: 64 VNNAGLRIEEIVDAAKGKIRLDSWISSRINGVSRARVQSSIRLGLVTVNGRVVDKVSHNV 123
Query: 363 RPGDKVNCTISELQPLRAEPEDIPLDIVYEDAHVLVVNKPAHMVVHPAPG 512
+ GD+VNCTISELQPL+AE EDIPLDIVYED HVLVVNKPAHMVVHPAPG
Sbjct: 124 KSGDEVNCTISELQPLKAEAEDIPLDIVYEDKHVLVVNKPAHMVVHPAPG 173
>ref|XP_002519370.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
gi|223541437|gb|EEF42987.1| ribosomal pseudouridine
synthase, putative [Ricinus communis]
Length = 399
Score = 172 bits (435), Expect = 6e-41
Identities = 86/112 (76%), Positives = 97/112 (86%), Gaps = 3/112 (2%)
Frame = +3
Query: 186 NFAGVRLEETVEKGSQKS---RLDSWVSSRIQGVSRARVQSSIRAGLVSVNGRVVDKVSQ 356
N+ G+RLEETV+ KS RLDSW+SSRI G+SRARVQSSI++GLVSVNGRVVDKVS
Sbjct: 52 NYGGIRLEETVQVVHAKSVKLRLDSWISSRISGISRARVQSSIKSGLVSVNGRVVDKVSH 111
Query: 357 VIRPGDKVNCTISELQPLRAEPEDIPLDIVYEDAHVLVVNKPAHMVVHPAPG 512
++ GDKV CTISELQPLRAEPED+PLDIVYED H+LVVNKP HMVVHPAPG
Sbjct: 112 NVKFGDKVTCTISELQPLRAEPEDMPLDIVYEDEHLLVVNKPPHMVVHPAPG 163