BLASTX nr result
ID: Sinomenium21_contig00035885
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00035885
(453 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_740694.1| hypothetical chloroplast RF2 [Nandina domestica... 70 8e-25
ref|YP_004564147.1| hypothetical chloroplast RF2 [Nelumbo nucife... 70 3e-24
gb|ADD30886.1| putative RF2 protein [Nelumbo nucifera] 70 3e-24
ref|YP_740609.1| hypothetical chloroplast RF2 [Platanus occident... 68 9e-24
ref|YP_006503485.1| Ycf2 (chloroplast) [Gossypium capitis-viridi... 68 1e-23
ref|YP_538978.1| Ycf2 [Gossypium hirsutum] gi|91208964|ref|YP_53... 68 1e-23
ref|YP_008992938.1| hypothetical chloroplast RF21 (chloroplast) ... 68 1e-23
ref|YP_008992766.1| hypothetical chloroplast RF21 (chloroplast) ... 68 1e-23
ref|YP_008992680.1| hypothetical chloroplast RF21 (chloroplast) ... 68 1e-23
ref|YP_008992593.1| hypothetical chloroplast RF21 (chloroplast) ... 68 1e-23
ref|YP_006503651.1| Ycf2 (chloroplast) [Gossypium robinsonii] gi... 68 1e-23
ref|YP_006503402.1| Ycf2 (chloroplast) [Gossypium somalense] gi|... 68 1e-23
ref|YP_006503319.1| Ycf2 (chloroplast) [Gossypium incanum] gi|39... 68 1e-23
gb|AEB90554.1| Ycf2 (chloroplast) [Gossypium hirsutum] gi|329317... 68 1e-23
ref|YP_006303533.1| Ycf2 (chloroplast) [Gossypium gossypioides] ... 68 1e-23
ref|YP_005088322.1| Ycf2 (chloroplast) [Gossypium tomentosum] gi... 68 1e-23
ref|YP_005087735.1| Ycf2 (chloroplast) [Gossypium raimondii] gi|... 68 1e-23
ref|YP_005088418.1| Ycf2 (chloroplast) [Gossypium herbaceum subs... 68 1e-23
ref|YP_004286046.1| hypothetical chloroplast RF21 [Gossypium thu... 68 1e-23
ref|YP_913230.1| hypothetical protein GobaCp066 [Gossypium barba... 68 1e-23
>ref|YP_740694.1| hypothetical chloroplast RF2 [Nandina domestica]
gi|114330032|ref|YP_740713.1| hypothetical chloroplast
RF2 [Nandina domestica]
gi|122165906|sp|Q09FP8.1|YCF2_NANDO RecName: Full=Protein
Ycf2 gi|114054515|gb|ABI49908.1| hypothetical chloroplast
RF2 [Nandina domestica] gi|114054534|gb|ABI49927.1|
hypothetical chloroplast RF2 [Nandina domestica]
Length = 2299
Score = 69.7 bits (169), Expect(2) = 8e-25
Identities = 37/47 (78%), Positives = 40/47 (85%), Gaps = 3/47 (6%)
Frame = +2
Query: 236 MPQKVDLTLIAPNKSNTC--IRRLLIP-*RNHFFTLLYTRGFHLKRK 367
+PQKVD TLIAPNKSNTC IRRLLIP R HFFTL YTRGFHL++K
Sbjct: 1788 IPQKVDPTLIAPNKSNTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKK 1834
Score = 69.7 bits (169), Expect(2) = 8e-25
Identities = 34/36 (94%), Positives = 34/36 (94%)
Frame = +1
Query: 346 GISLEKKMFHTNGFGSITMGSNARDLVALTNEALSI 453
G LEKKMFHTNGFGSITMGSNARDLVALTNEALSI
Sbjct: 1828 GFHLEKKMFHTNGFGSITMGSNARDLVALTNEALSI 1863
>ref|YP_004564147.1| hypothetical chloroplast RF2 [Nelumbo nucifera]
gi|334362111|ref|YP_004564164.1| hypothetical chloroplast
RF2 [Nelumbo nucifera] gi|224474267|gb|ACN49453.1|
hypothetical chloroplast RF2 [Nelumbo nucifera]
gi|224474284|gb|ACN49470.1| hypothetical chloroplast RF2
[Nelumbo nucifera] gi|340807030|gb|AEK71646.1|
hypothetical chloroplast RF2 [Nelumbo nucifera]
gi|383286841|gb|AFH01491.1| hypothetical chloroplast RF21
(chloroplast) [Nelumbo nucifera]
gi|383286862|gb|AFH01512.1| hypothetical chloroplast RF21
(chloroplast) [Nelumbo nucifera]
gi|519666955|gb|AGO98567.1| hypothetical chloroplast RF21
(chloroplast) [Nelumbo nucifera]
gi|519666972|gb|AGO98584.1| hypothetical chloroplast RF21
(chloroplast) [Nelumbo nucifera]
Length = 2310
Score = 69.7 bits (169), Expect(2) = 3e-24
Identities = 34/36 (94%), Positives = 34/36 (94%)
Frame = +1
Query: 346 GISLEKKMFHTNGFGSITMGSNARDLVALTNEALSI 453
G LEKKMFHTNGFGSITMGSNARDLVALTNEALSI
Sbjct: 1841 GFHLEKKMFHTNGFGSITMGSNARDLVALTNEALSI 1876
Score = 67.8 bits (164), Expect(2) = 3e-24
Identities = 36/47 (76%), Positives = 39/47 (82%), Gaps = 3/47 (6%)
Frame = +2
Query: 236 MPQKVDLTLIAPNKSNTC--IRRLLIP-*RNHFFTLLYTRGFHLKRK 367
+PQKVD LIAPNKSNTC IRRLLIP R HFFTL YTRGFHL++K
Sbjct: 1801 IPQKVDPALIAPNKSNTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKK 1847
>gb|ADD30886.1| putative RF2 protein [Nelumbo nucifera]
Length = 2304
Score = 69.7 bits (169), Expect(2) = 3e-24
Identities = 34/36 (94%), Positives = 34/36 (94%)
Frame = +1
Query: 346 GISLEKKMFHTNGFGSITMGSNARDLVALTNEALSI 453
G LEKKMFHTNGFGSITMGSNARDLVALTNEALSI
Sbjct: 1835 GFHLEKKMFHTNGFGSITMGSNARDLVALTNEALSI 1870
Score = 67.8 bits (164), Expect(2) = 3e-24
Identities = 36/47 (76%), Positives = 39/47 (82%), Gaps = 3/47 (6%)
Frame = +2
Query: 236 MPQKVDLTLIAPNKSNTC--IRRLLIP-*RNHFFTLLYTRGFHLKRK 367
+PQKVD LIAPNKSNTC IRRLLIP R HFFTL YTRGFHL++K
Sbjct: 1795 IPQKVDPALIAPNKSNTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKK 1841
>ref|YP_740609.1| hypothetical chloroplast RF2 [Platanus occidentalis]
gi|114329808|ref|YP_740626.1| hypothetical chloroplast
RF2 [Platanus occidentalis]
gi|122165984|sp|Q09FY5.1|YCF2_PLAOC RecName: Full=Protein
Ycf2 gi|114054429|gb|ABI49823.1| hypothetical chloroplast
RF2 [Platanus occidentalis] gi|114054446|gb|ABI49840.1|
hypothetical chloroplast RF2 [Platanus occidentalis]
Length = 2293
Score = 68.2 bits (165), Expect(2) = 9e-24
Identities = 33/36 (91%), Positives = 34/36 (94%)
Frame = +1
Query: 346 GISLEKKMFHTNGFGSITMGSNARDLVALTNEALSI 453
G LEKK+FHTNGFGSITMGSNARDLVALTNEALSI
Sbjct: 1826 GFHLEKKIFHTNGFGSITMGSNARDLVALTNEALSI 1861
Score = 67.8 bits (164), Expect(2) = 9e-24
Identities = 36/47 (76%), Positives = 39/47 (82%), Gaps = 3/47 (6%)
Frame = +2
Query: 236 MPQKVDLTLIAPNKSNTC--IRRLLIP-*RNHFFTLLYTRGFHLKRK 367
+PQKVD LIAPNKSNTC IRRLLIP R HFFTL YTRGFHL++K
Sbjct: 1786 IPQKVDPALIAPNKSNTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKK 1832
>ref|YP_006503485.1| Ycf2 (chloroplast) [Gossypium capitis-viridis]
gi|394830856|ref|YP_006503502.1| Ycf2 (chloroplast)
[Gossypium capitis-viridis]
gi|570758921|ref|YP_008992507.1| hypothetical chloroplast
RF21 (chloroplast) [Gossypium anomalum]
gi|570758946|ref|YP_008992526.1| hypothetical chloroplast
RF21 (chloroplast) [Gossypium anomalum]
gi|326457080|gb|ADZ74344.1| hypothetical chloroplast RF21
[Gossypium anomalum] gi|326457105|gb|ADZ74369.1|
hypothetical chloroplast RF21 [Gossypium anomalum]
gi|335354540|gb|AEH43158.1| Ycf2 (chloroplast) [Gossypium
capitis-viridis] gi|335354556|gb|AEH43174.1| Ycf2
(chloroplast) [Gossypium capitis-viridis]
Length = 2302
Score = 68.2 bits (165), Expect(2) = 1e-23
Identities = 33/36 (91%), Positives = 34/36 (94%)
Frame = +1
Query: 346 GISLEKKMFHTNGFGSITMGSNARDLVALTNEALSI 453
G LEKKMFHTNGFGSIT+GSNARDLVALTNEALSI
Sbjct: 1844 GFHLEKKMFHTNGFGSITVGSNARDLVALTNEALSI 1879
Score = 67.4 bits (163), Expect(2) = 1e-23
Identities = 36/47 (76%), Positives = 39/47 (82%), Gaps = 3/47 (6%)
Frame = +2
Query: 236 MPQKVDLTLIAPNKSNTC--IRRLLIP-*RNHFFTLLYTRGFHLKRK 367
+PQKVD TLIAPNK NTC IRRLLIP R HFFTL YTRGFHL++K
Sbjct: 1804 IPQKVDPTLIAPNKLNTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKK 1850
>ref|YP_538978.1| Ycf2 [Gossypium hirsutum] gi|91208964|ref|YP_538997.1| Ycf2
[Gossypium hirsutum] gi|372291071|ref|YP_005087831.1|
Ycf2 (chloroplast) [Gossypium darwinii]
gi|372291087|ref|YP_005087848.1| Ycf2 (chloroplast)
[Gossypium darwinii] gi|372291814|ref|YP_005088958.1|
Ycf2 (chloroplast) [Gossypium mustelinum]
gi|372291829|ref|YP_005088975.1| Ycf2 (chloroplast)
[Gossypium mustelinum]
gi|109896299|sp|Q2L949.1|YCF2_GOSHI RecName: Full=Protein
Ycf2 gi|85687457|gb|ABC73669.1| hypothetical chloroplast
RF2 [Gossypium hirsutum] gi|85687478|gb|ABC73690.1|
hypothetical chloroplast RF2 [Gossypium hirsutum]
gi|318084439|gb|ADV38914.1| Ycf2 (chloroplast) [Gossypium
darwinii] gi|318084455|gb|ADV38930.1| Ycf2 (chloroplast)
[Gossypium darwinii] gi|318084609|gb|ADV39082.1| Ycf2
(chloroplast) [Gossypium mustelinum]
gi|318084624|gb|ADV39097.1| Ycf2 (chloroplast) [Gossypium
mustelinum] gi|329317280|gb|AEB90637.1| ycf2
(chloroplast) [Gossypium hirsutum]
gi|329317296|gb|AEB90653.1| Ycf2 (chloroplast) [Gossypium
hirsutum] gi|329317364|gb|AEB90720.1| ycf2 (chloroplast)
[Gossypium barbadense] gi|329317380|gb|AEB90736.1| Ycf2
(chloroplast) [Gossypium barbadense]
gi|329317448|gb|AEB90803.1| Ycf2 (chloroplast) [Gossypium
barbadense] gi|329317464|gb|AEB90819.1| Ycf2
(chloroplast) [Gossypium barbadense]
gi|329317532|gb|AEB90886.1| ycf2 (chloroplast) [Gossypium
barbadense] gi|329317548|gb|AEB90902.1| Ycf2
(chloroplast) [Gossypium barbadense]
Length = 2298
Score = 68.2 bits (165), Expect(2) = 1e-23
Identities = 33/36 (91%), Positives = 34/36 (94%)
Frame = +1
Query: 346 GISLEKKMFHTNGFGSITMGSNARDLVALTNEALSI 453
G LEKKMFHTNGFGSIT+GSNARDLVALTNEALSI
Sbjct: 1836 GFHLEKKMFHTNGFGSITVGSNARDLVALTNEALSI 1871
Score = 67.4 bits (163), Expect(2) = 1e-23
Identities = 36/47 (76%), Positives = 39/47 (82%), Gaps = 3/47 (6%)
Frame = +2
Query: 236 MPQKVDLTLIAPNKSNTC--IRRLLIP-*RNHFFTLLYTRGFHLKRK 367
+PQKVD TLIAPNK NTC IRRLLIP R HFFTL YTRGFHL++K
Sbjct: 1796 IPQKVDPTLIAPNKLNTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKK 1842
>ref|YP_008992938.1| hypothetical chloroplast RF21 (chloroplast) [Gossypium sturtianum]
gi|326457519|gb|ADZ74778.1| hypothetical chloroplast RF21
[Gossypium sturtianum]
Length = 2298
Score = 68.2 bits (165), Expect(2) = 1e-23
Identities = 33/36 (91%), Positives = 34/36 (94%)
Frame = +1
Query: 346 GISLEKKMFHTNGFGSITMGSNARDLVALTNEALSI 453
G LEKKMFHTNGFGSIT+GSNARDLVALTNEALSI
Sbjct: 1838 GFHLEKKMFHTNGFGSITVGSNARDLVALTNEALSI 1873
Score = 67.4 bits (163), Expect(2) = 1e-23
Identities = 36/47 (76%), Positives = 39/47 (82%), Gaps = 3/47 (6%)
Frame = +2
Query: 236 MPQKVDLTLIAPNKSNTC--IRRLLIP-*RNHFFTLLYTRGFHLKRK 367
+PQKVD TLIAPNK NTC IRRLLIP R HFFTL YTRGFHL++K
Sbjct: 1798 IPQKVDPTLIAPNKLNTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKK 1844
>ref|YP_008992766.1| hypothetical chloroplast RF21 (chloroplast) [Gossypium longicalyx]
gi|570759726|ref|YP_008992785.1| hypothetical chloroplast
RF21 (chloroplast) [Gossypium longicalyx]
gi|326457343|gb|ADZ74604.1| hypothetical chloroplast RF21
[Gossypium longicalyx] gi|326457365|gb|ADZ74626.1|
hypothetical chloroplast RF21 [Gossypium longicalyx]
Length = 2298
Score = 68.2 bits (165), Expect(2) = 1e-23
Identities = 33/36 (91%), Positives = 34/36 (94%)
Frame = +1
Query: 346 GISLEKKMFHTNGFGSITMGSNARDLVALTNEALSI 453
G LEKKMFHTNGFGSIT+GSNARDLVALTNEALSI
Sbjct: 1838 GFHLEKKMFHTNGFGSITVGSNARDLVALTNEALSI 1873
Score = 67.4 bits (163), Expect(2) = 1e-23
Identities = 36/47 (76%), Positives = 39/47 (82%), Gaps = 3/47 (6%)
Frame = +2
Query: 236 MPQKVDLTLIAPNKSNTC--IRRLLIP-*RNHFFTLLYTRGFHLKRK 367
+PQKVD TLIAPNK NTC IRRLLIP R HFFTL YTRGFHL++K
Sbjct: 1798 IPQKVDPTLIAPNKLNTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKK 1844
>ref|YP_008992680.1| hypothetical chloroplast RF21 (chloroplast) [Gossypium herbaceum]
gi|570759640|ref|YP_008992699.1| hypothetical chloroplast
RF21 (chloroplast) [Gossypium herbaceum]
gi|326457258|gb|ADZ74520.1| hypothetical chloroplast RF21
[Gossypium herbaceum] gi|326457279|gb|ADZ74541.1|
hypothetical chloroplast RF21 [Gossypium herbaceum]
Length = 2298
Score = 68.2 bits (165), Expect(2) = 1e-23
Identities = 33/36 (91%), Positives = 34/36 (94%)
Frame = +1
Query: 346 GISLEKKMFHTNGFGSITMGSNARDLVALTNEALSI 453
G LEKKMFHTNGFGSIT+GSNARDLVALTNEALSI
Sbjct: 1838 GFHLEKKMFHTNGFGSITVGSNARDLVALTNEALSI 1873
Score = 67.4 bits (163), Expect(2) = 1e-23
Identities = 36/47 (76%), Positives = 39/47 (82%), Gaps = 3/47 (6%)
Frame = +2
Query: 236 MPQKVDLTLIAPNKSNTC--IRRLLIP-*RNHFFTLLYTRGFHLKRK 367
+PQKVD TLIAPNK NTC IRRLLIP R HFFTL YTRGFHL++K
Sbjct: 1798 IPQKVDPTLIAPNKLNTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKK 1844
>ref|YP_008992593.1| hypothetical chloroplast RF21 (chloroplast) [Gossypium bickii]
gi|570759034|ref|YP_008992613.1| hypothetical chloroplast
RF21 (chloroplast) [Gossypium bickii]
gi|326457169|gb|ADZ74432.1| hypothetical chloroplast RF21
[Gossypium bickii] gi|326457193|gb|ADZ74456.1|
hypothetical chloroplast RF21 [Gossypium bickii]
Length = 2298
Score = 68.2 bits (165), Expect(2) = 1e-23
Identities = 33/36 (91%), Positives = 34/36 (94%)
Frame = +1
Query: 346 GISLEKKMFHTNGFGSITMGSNARDLVALTNEALSI 453
G LEKKMFHTNGFGSIT+GSNARDLVALTNEALSI
Sbjct: 1838 GFHLEKKMFHTNGFGSITVGSNARDLVALTNEALSI 1873
Score = 67.4 bits (163), Expect(2) = 1e-23
Identities = 36/47 (76%), Positives = 39/47 (82%), Gaps = 3/47 (6%)
Frame = +2
Query: 236 MPQKVDLTLIAPNKSNTC--IRRLLIP-*RNHFFTLLYTRGFHLKRK 367
+PQKVD TLIAPNK NTC IRRLLIP R HFFTL YTRGFHL++K
Sbjct: 1798 IPQKVDPTLIAPNKLNTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKK 1844
>ref|YP_006503651.1| Ycf2 (chloroplast) [Gossypium robinsonii]
gi|394831032|ref|YP_006503668.1| Ycf2 (chloroplast)
[Gossypium robinsonii] gi|335354708|gb|AEH43324.1| Ycf2
[Gossypium robinsonii] gi|335354724|gb|AEH43340.1| Ycf2
[Gossypium robinsonii]
Length = 2298
Score = 68.2 bits (165), Expect(2) = 1e-23
Identities = 33/36 (91%), Positives = 34/36 (94%)
Frame = +1
Query: 346 GISLEKKMFHTNGFGSITMGSNARDLVALTNEALSI 453
G LEKKMFHTNGFGSIT+GSNARDLVALTNEALSI
Sbjct: 1838 GFHLEKKMFHTNGFGSITVGSNARDLVALTNEALSI 1873
Score = 67.4 bits (163), Expect(2) = 1e-23
Identities = 36/47 (76%), Positives = 39/47 (82%), Gaps = 3/47 (6%)
Frame = +2
Query: 236 MPQKVDLTLIAPNKSNTC--IRRLLIP-*RNHFFTLLYTRGFHLKRK 367
+PQKVD TLIAPNK NTC IRRLLIP R HFFTL YTRGFHL++K
Sbjct: 1798 IPQKVDPTLIAPNKLNTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKK 1844
>ref|YP_006503402.1| Ycf2 (chloroplast) [Gossypium somalense]
gi|394830770|ref|YP_006503419.1| Ycf2 (chloroplast)
[Gossypium somalense] gi|394830929|ref|YP_006503568.1|
Ycf2 (chloroplast) [Gossypium areysianum]
gi|394830945|ref|YP_006503585.1| Ycf2 (chloroplast)
[Gossypium areysianum] gi|335354456|gb|AEH43075.1| Ycf2
[Gossypium somalense] gi|335354472|gb|AEH43091.1| Ycf2
[Gossypium somalense] gi|335354624|gb|AEH43241.1| Ycf2
(chloroplast) [Gossypium areysianum]
gi|335354640|gb|AEH43257.1| Ycf2 (chloroplast) [Gossypium
areysianum]
Length = 2298
Score = 68.2 bits (165), Expect(2) = 1e-23
Identities = 33/36 (91%), Positives = 34/36 (94%)
Frame = +1
Query: 346 GISLEKKMFHTNGFGSITMGSNARDLVALTNEALSI 453
G LEKKMFHTNGFGSIT+GSNARDLVALTNEALSI
Sbjct: 1838 GFHLEKKMFHTNGFGSITVGSNARDLVALTNEALSI 1873
Score = 67.4 bits (163), Expect(2) = 1e-23
Identities = 36/47 (76%), Positives = 39/47 (82%), Gaps = 3/47 (6%)
Frame = +2
Query: 236 MPQKVDLTLIAPNKSNTC--IRRLLIP-*RNHFFTLLYTRGFHLKRK 367
+PQKVD TLIAPNK NTC IRRLLIP R HFFTL YTRGFHL++K
Sbjct: 1798 IPQKVDPTLIAPNKLNTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKK 1844
>ref|YP_006503319.1| Ycf2 (chloroplast) [Gossypium incanum]
gi|394830683|ref|YP_006503336.1| Ycf2 (chloroplast)
[Gossypium incanum] gi|335354372|gb|AEH42992.1| Ycf2
[Gossypium incanum] gi|335354388|gb|AEH43008.1| Ycf2
[Gossypium incanum]
Length = 2298
Score = 68.2 bits (165), Expect(2) = 1e-23
Identities = 33/36 (91%), Positives = 34/36 (94%)
Frame = +1
Query: 346 GISLEKKMFHTNGFGSITMGSNARDLVALTNEALSI 453
G LEKKMFHTNGFGSIT+GSNARDLVALTNEALSI
Sbjct: 1838 GFHLEKKMFHTNGFGSITVGSNARDLVALTNEALSI 1873
Score = 67.4 bits (163), Expect(2) = 1e-23
Identities = 36/47 (76%), Positives = 39/47 (82%), Gaps = 3/47 (6%)
Frame = +2
Query: 236 MPQKVDLTLIAPNKSNTC--IRRLLIP-*RNHFFTLLYTRGFHLKRK 367
+PQKVD TLIAPNK NTC IRRLLIP R HFFTL YTRGFHL++K
Sbjct: 1798 IPQKVDPTLIAPNKLNTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKK 1844
>gb|AEB90554.1| Ycf2 (chloroplast) [Gossypium hirsutum] gi|329317212|gb|AEB90570.1|
Ycf2 (chloroplast) [Gossypium hirsutum]
Length = 2298
Score = 68.2 bits (165), Expect(2) = 1e-23
Identities = 33/36 (91%), Positives = 34/36 (94%)
Frame = +1
Query: 346 GISLEKKMFHTNGFGSITMGSNARDLVALTNEALSI 453
G LEKKMFHTNGFGSIT+GSNARDLVALTNEALSI
Sbjct: 1836 GFHLEKKMFHTNGFGSITVGSNARDLVALTNEALSI 1871
Score = 67.4 bits (163), Expect(2) = 1e-23
Identities = 36/47 (76%), Positives = 39/47 (82%), Gaps = 3/47 (6%)
Frame = +2
Query: 236 MPQKVDLTLIAPNKSNTC--IRRLLIP-*RNHFFTLLYTRGFHLKRK 367
+PQKVD TLIAPNK NTC IRRLLIP R HFFTL YTRGFHL++K
Sbjct: 1796 IPQKVDPTLIAPNKLNTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKK 1842
>ref|YP_006303533.1| Ycf2 (chloroplast) [Gossypium gossypioides]
gi|386800894|ref|YP_006303550.1| Ycf2 (chloroplast)
[Gossypium gossypioides] gi|329317112|gb|AEB90471.1| Ycf2
(chloroplast) [Gossypium gossypioides]
gi|329317128|gb|AEB90487.1| Ycf2 (chloroplast) [Gossypium
gossypioides]
Length = 2298
Score = 68.2 bits (165), Expect(2) = 1e-23
Identities = 33/36 (91%), Positives = 34/36 (94%)
Frame = +1
Query: 346 GISLEKKMFHTNGFGSITMGSNARDLVALTNEALSI 453
G LEKKMFHTNGFGSIT+GSNARDLVALTNEALSI
Sbjct: 1838 GFHLEKKMFHTNGFGSITVGSNARDLVALTNEALSI 1873
Score = 67.4 bits (163), Expect(2) = 1e-23
Identities = 36/47 (76%), Positives = 39/47 (82%), Gaps = 3/47 (6%)
Frame = +2
Query: 236 MPQKVDLTLIAPNKSNTC--IRRLLIP-*RNHFFTLLYTRGFHLKRK 367
+PQKVD TLIAPNK NTC IRRLLIP R HFFTL YTRGFHL++K
Sbjct: 1798 IPQKVDPTLIAPNKLNTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKK 1844
>ref|YP_005088322.1| Ycf2 (chloroplast) [Gossypium tomentosum]
gi|372291443|ref|YP_005088339.1| Ycf2 (chloroplast)
[Gossypium tomentosum] gi|318084777|gb|ADV39248.1| Ycf2
(chloroplast) [Gossypium tomentosum]
gi|318084794|gb|ADV39265.1| Ycf2 (chloroplast) [Gossypium
tomentosum]
Length = 2298
Score = 68.2 bits (165), Expect(2) = 1e-23
Identities = 33/36 (91%), Positives = 34/36 (94%)
Frame = +1
Query: 346 GISLEKKMFHTNGFGSITMGSNARDLVALTNEALSI 453
G LEKKMFHTNGFGSIT+GSNARDLVALTNEALSI
Sbjct: 1836 GFHLEKKMFHTNGFGSITVGSNARDLVALTNEALSI 1871
Score = 67.4 bits (163), Expect(2) = 1e-23
Identities = 36/47 (76%), Positives = 39/47 (82%), Gaps = 3/47 (6%)
Frame = +2
Query: 236 MPQKVDLTLIAPNKSNTC--IRRLLIP-*RNHFFTLLYTRGFHLKRK 367
+PQKVD TLIAPNK NTC IRRLLIP R HFFTL YTRGFHL++K
Sbjct: 1796 IPQKVDPTLIAPNKLNTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKK 1842
>ref|YP_005087735.1| Ycf2 (chloroplast) [Gossypium raimondii]
gi|372290984|ref|YP_005087752.1| Ycf2 (chloroplast)
[Gossypium raimondii] gi|318084688|gb|ADV39160.1| Ycf2
(chloroplast) [Gossypium raimondii]
gi|318084702|gb|ADV39174.1| Ycf2 (chloroplast) [Gossypium
raimondii]
Length = 2298
Score = 68.2 bits (165), Expect(2) = 1e-23
Identities = 33/36 (91%), Positives = 34/36 (94%)
Frame = +1
Query: 346 GISLEKKMFHTNGFGSITMGSNARDLVALTNEALSI 453
G LEKKMFHTNGFGSIT+GSNARDLVALTNEALSI
Sbjct: 1838 GFHLEKKMFHTNGFGSITVGSNARDLVALTNEALSI 1873
Score = 67.4 bits (163), Expect(2) = 1e-23
Identities = 36/47 (76%), Positives = 39/47 (82%), Gaps = 3/47 (6%)
Frame = +2
Query: 236 MPQKVDLTLIAPNKSNTC--IRRLLIP-*RNHFFTLLYTRGFHLKRK 367
+PQKVD TLIAPNK NTC IRRLLIP R HFFTL YTRGFHL++K
Sbjct: 1798 IPQKVDPTLIAPNKLNTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKK 1844
>ref|YP_005088418.1| Ycf2 (chloroplast) [Gossypium herbaceum subsp. africanum]
gi|372291541|ref|YP_005088435.1| Ycf2 (chloroplast)
[Gossypium herbaceum subsp. africanum]
gi|372291898|ref|YP_005089041.1| Ycf2 (chloroplast)
[Gossypium arboreum] gi|372291913|ref|YP_005089058.1|
Ycf2 (chloroplast) [Gossypium arboreum]
gi|318084357|gb|ADV38833.1| Ycf2 (chloroplast) [Gossypium
arboreum] gi|318084372|gb|ADV38848.1| Ycf2 (chloroplast)
[Gossypium arboreum] gi|318084525|gb|ADV38999.1| Ycf2
(chloroplast) [Gossypium herbaceum subsp. africanum]
gi|318084542|gb|ADV39016.1| Ycf2 (chloroplast) [Gossypium
herbaceum subsp. africanum]
Length = 2298
Score = 68.2 bits (165), Expect(2) = 1e-23
Identities = 33/36 (91%), Positives = 34/36 (94%)
Frame = +1
Query: 346 GISLEKKMFHTNGFGSITMGSNARDLVALTNEALSI 453
G LEKKMFHTNGFGSIT+GSNARDLVALTNEALSI
Sbjct: 1838 GFHLEKKMFHTNGFGSITVGSNARDLVALTNEALSI 1873
Score = 67.4 bits (163), Expect(2) = 1e-23
Identities = 36/47 (76%), Positives = 39/47 (82%), Gaps = 3/47 (6%)
Frame = +2
Query: 236 MPQKVDLTLIAPNKSNTC--IRRLLIP-*RNHFFTLLYTRGFHLKRK 367
+PQKVD TLIAPNK NTC IRRLLIP R HFFTL YTRGFHL++K
Sbjct: 1798 IPQKVDPTLIAPNKLNTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKK 1844
>ref|YP_004286046.1| hypothetical chloroplast RF21 [Gossypium thurberi]
gi|325210992|ref|YP_004286065.1| hypothetical chloroplast
RF21 [Gossypium thurberi] gi|290775831|gb|ADD62327.1|
hypothetical chloroplast RF21 [Gossypium thurberi]
gi|290775854|gb|ADD62350.1| hypothetical chloroplast RF21
[Gossypium thurberi]
Length = 2298
Score = 68.2 bits (165), Expect(2) = 1e-23
Identities = 33/36 (91%), Positives = 34/36 (94%)
Frame = +1
Query: 346 GISLEKKMFHTNGFGSITMGSNARDLVALTNEALSI 453
G LEKKMFHTNGFGSIT+GSNARDLVALTNEALSI
Sbjct: 1838 GFHLEKKMFHTNGFGSITVGSNARDLVALTNEALSI 1873
Score = 67.4 bits (163), Expect(2) = 1e-23
Identities = 36/47 (76%), Positives = 39/47 (82%), Gaps = 3/47 (6%)
Frame = +2
Query: 236 MPQKVDLTLIAPNKSNTC--IRRLLIP-*RNHFFTLLYTRGFHLKRK 367
+PQKVD TLIAPNK NTC IRRLLIP R HFFTL YTRGFHL++K
Sbjct: 1798 IPQKVDPTLIAPNKLNTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKK 1844
>ref|YP_913230.1| hypothetical protein GobaCp066 [Gossypium barbadense]
gi|119368560|ref|YP_913247.1| hypothetical protein
GobaCp086 [Gossypium barbadense]
gi|125991251|sp|A0ZZ78.1|YCF2_GOSBA RecName: Full=Protein
Ycf2 gi|119224904|dbj|BAF41290.1| Hypothetical protein
[Gossypium barbadense] gi|119224922|dbj|BAF41308.1|
Hypothetical protein [Gossypium barbadense]
Length = 2298
Score = 68.2 bits (165), Expect(2) = 1e-23
Identities = 33/36 (91%), Positives = 34/36 (94%)
Frame = +1
Query: 346 GISLEKKMFHTNGFGSITMGSNARDLVALTNEALSI 453
G LEKKMFHTNGFGSIT+GSNARDLVALTNEALSI
Sbjct: 1836 GFHLEKKMFHTNGFGSITVGSNARDLVALTNEALSI 1871
Score = 67.4 bits (163), Expect(2) = 1e-23
Identities = 36/47 (76%), Positives = 39/47 (82%), Gaps = 3/47 (6%)
Frame = +2
Query: 236 MPQKVDLTLIAPNKSNTC--IRRLLIP-*RNHFFTLLYTRGFHLKRK 367
+PQKVD TLIAPNK NTC IRRLLIP R HFFTL YTRGFHL++K
Sbjct: 1796 IPQKVDPTLIAPNKLNTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKK 1842