BLASTX nr result
ID: Sinomenium21_contig00035870
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00035870
(1025 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXB53029.1| RNA polymerase II-associated protein 3 [Morus not... 174 1e-48
ref|XP_007031161.1| Tetratricopeptide repeat (TPR)-like superfam... 194 4e-47
ref|XP_007031158.1| Tetratricopeptide repeat-like superfamily pr... 194 4e-47
ref|XP_007031159.1| Tetratricopeptide repeat (TPR)-like superfam... 194 6e-47
ref|XP_006472205.1| PREDICTED: RNA polymerase II-associated prot... 192 2e-46
ref|XP_006392426.1| hypothetical protein EUTSA_v10023436mg [Eutr... 166 4e-46
ref|XP_006433540.1| hypothetical protein CICLE_v10003914mg [Citr... 191 5e-46
gb|EXB56846.1| RNA polymerase II-associated protein 3 [Morus not... 165 6e-46
ref|XP_002277910.2| PREDICTED: RNA polymerase II-associated prot... 189 2e-45
emb|CBI39598.3| unnamed protein product [Vitis vinifera] 189 2e-45
ref|XP_006382393.1| hypothetical protein POPTR_0005s01710g [Popu... 187 6e-45
ref|XP_002894647.1| hypothetical protein ARALYDRAFT_474807 [Arab... 162 6e-45
ref|XP_004495650.1| PREDICTED: RNA polymerase II-associated prot... 187 8e-45
ref|NP_001185250.1| carboxylate clamp-tetratricopeptide repeat p... 161 1e-44
ref|NP_176039.2| carboxylate clamp-tetratricopeptide repeat prot... 161 1e-44
ref|XP_006302207.1| hypothetical protein CARUB_v10020218mg [Caps... 163 5e-44
ref|XP_004495648.1| PREDICTED: RNA polymerase II-associated prot... 184 5e-44
ref|XP_004495647.1| PREDICTED: RNA polymerase II-associated prot... 184 5e-44
ref|XP_004495649.1| PREDICTED: RNA polymerase II-associated prot... 180 1e-42
ref|XP_006588434.1| PREDICTED: uncharacterized protein LOC100784... 179 2e-42
>gb|EXB53029.1| RNA polymerase II-associated protein 3 [Morus notabilis]
Length = 450
Score = 174 bits (440), Expect(2) = 1e-48
Identities = 106/200 (53%), Positives = 120/200 (60%), Gaps = 25/200 (12%)
Frame = -2
Query: 721 KKNARIFQGFLNDLQDWXXXXXXXXXXXKAQSH--------EEKKKTGIVSEAKGVARKV 566
+ A FQGFLNDLQDW K ++ KK G + + A K
Sbjct: 10 RDEALAFQGFLNDLQDWEFSLEDKDKDKKMKAQASDKGISVSSSKKIGEAGKDRKAAGKS 69
Query: 565 PPADYSRNNAQQFDYXXXXXXXXXXXSKLFAEESSPDAASEKELGNEYFKQKKFKEAIDC 386
+Y +++ +DY S +E+S DAASEKELGNEYFKQKKFKEAIDC
Sbjct: 70 STFEYL-SSSMPYDYSRKYDAINQVSSSSISEDSYTDAASEKELGNEYFKQKKFKEAIDC 128
Query: 385 YSRSIALSPTAVAFANRAMAYLKLK-----------------RFGEAETDCTEALNLDDR 257
YSRSIALS TAVA+ANRAMAYLKLK RF EAE DCTEALN+DDR
Sbjct: 129 YSRSIALSSTAVAYANRAMAYLKLKRQLLPYLIFFCKSIFLIRFQEAEGDCTEALNMDDR 188
Query: 256 YIKAYSRRATARKELGKLKE 197
YIKAYSRRATARKELGKLKE
Sbjct: 189 YIKAYSRRATARKELGKLKE 208
Score = 47.4 bits (111), Expect(2) = 1e-48
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
Frame = -3
Query: 222 GKNLESSKNPXXXXRLEPHNQELKKQYADAKALYDKELLAKAS----GMVGKSSVGEKAA 55
GK E ++ RLEP+NQE+KKQY++AK+L +K +L KAS V K EK
Sbjct: 204 GKLKECIEDAEFALRLEPNNQEIKKQYSEAKSLCEKVILQKASVALENTVQKMQKAEKK- 262
Query: 54 GGTAVKANRIKEMENGS 4
T V+ N I+ +E+ +
Sbjct: 263 -DTKVQNNGIQPVESAT 278
>ref|XP_007031161.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
isoform 4 [Theobroma cacao] gi|508719766|gb|EOY11663.1|
Tetratricopeptide repeat (TPR)-like superfamily protein,
putative isoform 4 [Theobroma cacao]
Length = 421
Score = 194 bits (494), Expect = 4e-47
Identities = 105/170 (61%), Positives = 121/170 (71%)
Frame = -2
Query: 703 FQGFLNDLQDWXXXXXXXXXXXKAQSHEEKKKTGIVSEAKGVARKVPPADYSRNNAQQFD 524
FQGFLN+LQDW K+Q+ ++++ T G + + D S +++Q+D
Sbjct: 13 FQGFLNNLQDWELSLKEKDKIMKSQASDKEQLTNEKGRPTGKSSLI---DSSTTSSRQYD 69
Query: 523 YXXXXXXXXXXXSKLFAEESSPDAASEKELGNEYFKQKKFKEAIDCYSRSIALSPTAVAF 344
Y S EE+ PDAASEKELGNEYFKQKKFKEAIDCYSRSI LSPTAVA
Sbjct: 70 YLQNYDKFNSLSSSFVTEENMPDAASEKELGNEYFKQKKFKEAIDCYSRSIGLSPTAVAH 129
Query: 343 ANRAMAYLKLKRFGEAETDCTEALNLDDRYIKAYSRRATARKELGKLKES 194
ANRAMAYLK+K+F EAE DCTEALNLDDRYIKAYSRRATARKELGKLKES
Sbjct: 130 ANRAMAYLKIKKFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKES 179
Score = 58.9 bits (141), Expect = 3e-06
Identities = 30/64 (46%), Positives = 43/64 (67%)
Frame = -3
Query: 222 GKNLESSKNPXXXXRLEPHNQELKKQYADAKALYDKELLAKASGMVGKSSVGEKAAGGTA 43
GK ES ++ RLEP+NQE+KKQ+A+ K+LY+KE+L KASG++ KS + G +
Sbjct: 174 GKLKESIEDTEFALRLEPNNQEIKKQHAEFKSLYEKEILQKASGVLRKSMQEAQEVGKSE 233
Query: 42 VKAN 31
K N
Sbjct: 234 TKEN 237
>ref|XP_007031158.1| Tetratricopeptide repeat-like superfamily protein, putative isoform
1 [Theobroma cacao] gi|508719763|gb|EOY11660.1|
Tetratricopeptide repeat-like superfamily protein,
putative isoform 1 [Theobroma cacao]
Length = 468
Score = 194 bits (494), Expect = 4e-47
Identities = 105/170 (61%), Positives = 121/170 (71%)
Frame = -2
Query: 703 FQGFLNDLQDWXXXXXXXXXXXKAQSHEEKKKTGIVSEAKGVARKVPPADYSRNNAQQFD 524
FQGFLN+LQDW K+Q+ ++++ T G + + D S +++Q+D
Sbjct: 13 FQGFLNNLQDWELSLKEKDKIMKSQASDKEQLTNEKGRPTGKSSLI---DSSTTSSRQYD 69
Query: 523 YXXXXXXXXXXXSKLFAEESSPDAASEKELGNEYFKQKKFKEAIDCYSRSIALSPTAVAF 344
Y S EE+ PDAASEKELGNEYFKQKKFKEAIDCYSRSI LSPTAVA
Sbjct: 70 YLQNYDKFNSLSSSFVTEENMPDAASEKELGNEYFKQKKFKEAIDCYSRSIGLSPTAVAH 129
Query: 343 ANRAMAYLKLKRFGEAETDCTEALNLDDRYIKAYSRRATARKELGKLKES 194
ANRAMAYLK+K+F EAE DCTEALNLDDRYIKAYSRRATARKELGKLKES
Sbjct: 130 ANRAMAYLKIKKFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKES 179
Score = 58.9 bits (141), Expect = 3e-06
Identities = 30/64 (46%), Positives = 43/64 (67%)
Frame = -3
Query: 222 GKNLESSKNPXXXXRLEPHNQELKKQYADAKALYDKELLAKASGMVGKSSVGEKAAGGTA 43
GK ES ++ RLEP+NQE+KKQ+A+ K+LY+KE+L KASG++ KS + G +
Sbjct: 174 GKLKESIEDTEFALRLEPNNQEIKKQHAEFKSLYEKEILQKASGVLRKSMQEAQEVGKSE 233
Query: 42 VKAN 31
K N
Sbjct: 234 TKEN 237
>ref|XP_007031159.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
isoform 2 [Theobroma cacao] gi|508719764|gb|EOY11661.1|
Tetratricopeptide repeat (TPR)-like superfamily protein,
putative isoform 2 [Theobroma cacao]
Length = 422
Score = 194 bits (492), Expect = 6e-47
Identities = 108/171 (63%), Positives = 121/171 (70%), Gaps = 1/171 (0%)
Frame = -2
Query: 703 FQGFLNDLQDWXXXXXXXXXXXKAQ-SHEEKKKTGIVSEAKGVARKVPPADYSRNNAQQF 527
FQGFLN+LQDW K+Q S +E+ KT G + + D S +++Q+
Sbjct: 13 FQGFLNNLQDWELSLKEKDKIMKSQASDKEQLKTNEKGRPTGKSSLI---DSSTTSSRQY 69
Query: 526 DYXXXXXXXXXXXSKLFAEESSPDAASEKELGNEYFKQKKFKEAIDCYSRSIALSPTAVA 347
DY S EE+ PDAASEKELGNEYFKQKKFKEAIDCYSRSI LSPTAVA
Sbjct: 70 DYLQNYDKFNSLSSSFVTEENMPDAASEKELGNEYFKQKKFKEAIDCYSRSIGLSPTAVA 129
Query: 346 FANRAMAYLKLKRFGEAETDCTEALNLDDRYIKAYSRRATARKELGKLKES 194
ANRAMAYLK+K+F EAE DCTEALNLDDRYIKAYSRRATARKELGKLKES
Sbjct: 130 HANRAMAYLKIKKFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKES 180
Score = 58.9 bits (141), Expect = 3e-06
Identities = 30/64 (46%), Positives = 43/64 (67%)
Frame = -3
Query: 222 GKNLESSKNPXXXXRLEPHNQELKKQYADAKALYDKELLAKASGMVGKSSVGEKAAGGTA 43
GK ES ++ RLEP+NQE+KKQ+A+ K+LY+KE+L KASG++ KS + G +
Sbjct: 175 GKLKESIEDTEFALRLEPNNQEIKKQHAEFKSLYEKEILQKASGVLRKSMQEAQEVGKSE 234
Query: 42 VKAN 31
K N
Sbjct: 235 TKEN 238
>ref|XP_006472205.1| PREDICTED: RNA polymerase II-associated protein 3-like [Citrus
sinensis]
Length = 438
Score = 192 bits (487), Expect = 2e-46
Identities = 110/172 (63%), Positives = 118/172 (68%), Gaps = 2/172 (1%)
Frame = -2
Query: 703 FQGFLNDLQDWXXXXXXXXXXXKAQSHEEKKKTGIVSEAKGVARKVPPA--DYSRNNAQQ 530
FQGFLNDLQDW H+ K +VS + A+K P+ YSRN
Sbjct: 12 FQGFLNDLQDWDLSLNEKDKK---MKHKASSKDNLVSSSLKSAKKPSPSGNSYSRN---- 64
Query: 529 FDYXXXXXXXXXXXSKLFAEESSPDAASEKELGNEYFKQKKFKEAIDCYSRSIALSPTAV 350
S L EES+PDA SEKELGNE FKQKKFKEAIDCYSRSIALSPTAV
Sbjct: 65 ------YDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPTAV 118
Query: 349 AFANRAMAYLKLKRFGEAETDCTEALNLDDRYIKAYSRRATARKELGKLKES 194
A+ANRAMAYLKL+RF EAE DCTEALNLDDRYIKAYSRRATARKELGKLKES
Sbjct: 119 AYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKES 170
>ref|XP_006392426.1| hypothetical protein EUTSA_v10023436mg [Eutrema salsugineum]
gi|557088932|gb|ESQ29712.1| hypothetical protein
EUTSA_v10023436mg [Eutrema salsugineum]
Length = 473
Score = 166 bits (421), Expect(2) = 4e-46
Identities = 96/170 (56%), Positives = 110/170 (64%)
Frame = -2
Query: 703 FQGFLNDLQDWXXXXXXXXXXXKAQSHEEKKKTGIVSEAKGVARKVPPADYSRNNAQQFD 524
FQGFLNDLQDW S ++K K + + + K P+ + Q+D
Sbjct: 16 FQGFLNDLQDWEL------------SLKDKDKKIKQNLSNPTSEKFRPS-----GSGQYD 58
Query: 523 YXXXXXXXXXXXSKLFAEESSPDAASEKELGNEYFKQKKFKEAIDCYSRSIALSPTAVAF 344
+ S +ES DA SEKE GNEYFKQKKF EAIDCYSRSIALSP AVAF
Sbjct: 59 FVKKYGPMSGLSSSFADDESPLDANSEKEQGNEYFKQKKFNEAIDCYSRSIALSPNAVAF 118
Query: 343 ANRAMAYLKLKRFGEAETDCTEALNLDDRYIKAYSRRATARKELGKLKES 194
ANRAMAYLK+KR+ EAE DCTEALNLDDRY KAYSRRATARK LG +KE+
Sbjct: 119 ANRAMAYLKIKRYREAEIDCTEALNLDDRYTKAYSRRATARKALGMVKEA 168
Score = 46.2 bits (108), Expect(2) = 4e-46
Identities = 21/40 (52%), Positives = 30/40 (75%)
Frame = -3
Query: 210 ESSKNPXXXXRLEPHNQELKKQYADAKALYDKELLAKASG 91
E+ ++ RLEP +QEL+KQYAD K+L +KE++ KASG
Sbjct: 167 EAMEDAEFALRLEPQSQELQKQYADIKSLLEKEIIEKASG 206
>ref|XP_006433540.1| hypothetical protein CICLE_v10003914mg [Citrus clementina]
gi|557535662|gb|ESR46780.1| hypothetical protein
CICLE_v10003914mg [Citrus clementina]
Length = 977
Score = 191 bits (484), Expect = 5e-46
Identities = 111/181 (61%), Positives = 119/181 (65%), Gaps = 2/181 (1%)
Frame = -2
Query: 730 PKCKKNARIFQGFLNDLQDWXXXXXXXXXXXKAQSHEEKKKTGIVSEAKGVARKVPPA-- 557
P + A FQGFLNDLQDW H+ K +VS + K P+
Sbjct: 542 PHNRDQALDFQGFLNDLQDWDLSLHEKDKK---MKHKASSKDNLVSSSLKSGEKPSPSGN 598
Query: 556 DYSRNNAQQFDYXXXXXXXXXXXSKLFAEESSPDAASEKELGNEYFKQKKFKEAIDCYSR 377
YSRN S L EES+PDA SEKELGNE FKQKKFKEAIDCYSR
Sbjct: 599 SYSRN----------YDPVSRISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSR 648
Query: 376 SIALSPTAVAFANRAMAYLKLKRFGEAETDCTEALNLDDRYIKAYSRRATARKELGKLKE 197
SIALSPTAVA+ANRAMAYLKL+RF EAE DCTEALNLDDRYIKAYSRRATARKELGKLKE
Sbjct: 649 SIALSPTAVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKE 708
Query: 196 S 194
S
Sbjct: 709 S 709
>gb|EXB56846.1| RNA polymerase II-associated protein 3 [Morus notabilis]
Length = 381
Score = 165 bits (417), Expect(2) = 6e-46
Identities = 93/142 (65%), Positives = 104/142 (73%), Gaps = 3/142 (2%)
Frame = -2
Query: 613 KKTGIVSEAKGVARKVPPADYSRNNAQQFDYXXXXXXXXXXXSKLFAEESSPDAASEKEL 434
KK G + + A K +Y +++ +DY S +E+S DAASEKEL
Sbjct: 19 KKIGEAGKDRKAAGKSSTFEYL-SSSMPYDYSRKYDAINQVSSSSISEDSYTDAASEKEL 77
Query: 433 GNEYFKQKKFKEAIDCYSRSIALSPTAVAFANRAMAYLKLKR---FGEAETDCTEALNLD 263
GNEYFKQKKFKEAIDCYSRSIALS TAVA+ANRAMAYLKLKR F EAE DCTEALN+D
Sbjct: 78 GNEYFKQKKFKEAIDCYSRSIALSSTAVAYANRAMAYLKLKRQVLFQEAEGDCTEALNMD 137
Query: 262 DRYIKAYSRRATARKELGKLKE 197
DRYIKAYSRRATARKELGKLKE
Sbjct: 138 DRYIKAYSRRATARKELGKLKE 159
Score = 47.4 bits (111), Expect(2) = 6e-46
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
Frame = -3
Query: 222 GKNLESSKNPXXXXRLEPHNQELKKQYADAKALYDKELLAKAS----GMVGKSSVGEKAA 55
GK E ++ RLEP+NQE+KKQY++AK+L +K +L KAS V K EK
Sbjct: 155 GKLKECIEDAEFALRLEPNNQEIKKQYSEAKSLCEKVILQKASVALENTVQKMQKAEKK- 213
Query: 54 GGTAVKANRIKEMENGS 4
T V+ N I+ +E+ +
Sbjct: 214 -DTKVQNNGIQPVESAT 229
>ref|XP_002277910.2| PREDICTED: RNA polymerase II-associated protein 3-like [Vitis
vinifera]
Length = 474
Score = 189 bits (479), Expect = 2e-45
Identities = 107/190 (56%), Positives = 125/190 (65%), Gaps = 8/190 (4%)
Frame = -2
Query: 739 FGRPKCKKNARIFQGFLNDLQDWXXXXXXXXXXXKAQSHEEK--------KKTGIVSEAK 584
F + A FQGFL DLQDW KAQ+ E+ K + +S +
Sbjct: 5 FPSKHARDQALDFQGFLTDLQDWELSLKEKDKKMKAQAEEKDVPTARGNVKHSSKLSSSP 64
Query: 583 GVARKVPPADYSRNNAQQFDYXXXXXXXXXXXSKLFAEESSPDAASEKELGNEYFKQKKF 404
GV+ ++ SR++ +Q +Y S EES PDAASEKELGNEYFKQ+KF
Sbjct: 65 GVSLRL---GQSRSDTRQHEYSRNHDAISRISSSFMTEESLPDAASEKELGNEYFKQRKF 121
Query: 403 KEAIDCYSRSIALSPTAVAFANRAMAYLKLKRFGEAETDCTEALNLDDRYIKAYSRRATA 224
KEAIDCYSRSIAL PTAVA+ANRAMAY+K+KRF EAE DC EALNLDDRYIKAYSRRATA
Sbjct: 122 KEAIDCYSRSIALLPTAVAYANRAMAYIKIKRFREAEDDCMEALNLDDRYIKAYSRRATA 181
Query: 223 RKELGKLKES 194
RKELGK KE+
Sbjct: 182 RKELGKFKEA 191
Score = 62.8 bits (151), Expect = 2e-07
Identities = 31/64 (48%), Positives = 44/64 (68%)
Frame = -3
Query: 222 GKNLESSKNPXXXXRLEPHNQELKKQYADAKALYDKELLAKASGMVGKSSVGEKAAGGTA 43
GK E++++ RLEP NQE+KKQYA+AK+LY+KE+L KASG + S G + G +
Sbjct: 186 GKFKEATEDAEFALRLEPQNQEIKKQYAEAKSLYEKEILQKASGALKSSVQGLQKVGKSV 245
Query: 42 VKAN 31
V+ N
Sbjct: 246 VEVN 249
>emb|CBI39598.3| unnamed protein product [Vitis vinifera]
Length = 1097
Score = 189 bits (479), Expect = 2e-45
Identities = 107/190 (56%), Positives = 125/190 (65%), Gaps = 8/190 (4%)
Frame = -2
Query: 739 FGRPKCKKNARIFQGFLNDLQDWXXXXXXXXXXXKAQSHEEK--------KKTGIVSEAK 584
F + A FQGFL DLQDW KAQ+ E+ K + +S +
Sbjct: 628 FPSKHARDQALDFQGFLTDLQDWELSLKEKDKKMKAQAEEKDVPTARGNVKHSSKLSSSP 687
Query: 583 GVARKVPPADYSRNNAQQFDYXXXXXXXXXXXSKLFAEESSPDAASEKELGNEYFKQKKF 404
GV+ ++ SR++ +Q +Y S EES PDAASEKELGNEYFKQ+KF
Sbjct: 688 GVSLRL---GQSRSDTRQHEYSRNHDAISRISSSFMTEESLPDAASEKELGNEYFKQRKF 744
Query: 403 KEAIDCYSRSIALSPTAVAFANRAMAYLKLKRFGEAETDCTEALNLDDRYIKAYSRRATA 224
KEAIDCYSRSIAL PTAVA+ANRAMAY+K+KRF EAE DC EALNLDDRYIKAYSRRATA
Sbjct: 745 KEAIDCYSRSIALLPTAVAYANRAMAYIKIKRFREAEDDCMEALNLDDRYIKAYSRRATA 804
Query: 223 RKELGKLKES 194
RKELGK KE+
Sbjct: 805 RKELGKFKEA 814
Score = 62.8 bits (151), Expect = 2e-07
Identities = 31/64 (48%), Positives = 44/64 (68%)
Frame = -3
Query: 222 GKNLESSKNPXXXXRLEPHNQELKKQYADAKALYDKELLAKASGMVGKSSVGEKAAGGTA 43
GK E++++ RLEP NQE+KKQYA+AK+LY+KE+L KASG + S G + G +
Sbjct: 809 GKFKEATEDAEFALRLEPQNQEIKKQYAEAKSLYEKEILQKASGALKSSVQGLQKVGKSV 868
Query: 42 VKAN 31
V+ N
Sbjct: 869 VEVN 872
>ref|XP_006382393.1| hypothetical protein POPTR_0005s01710g [Populus trichocarpa]
gi|550337753|gb|ERP60190.1| hypothetical protein
POPTR_0005s01710g [Populus trichocarpa]
Length = 402
Score = 187 bits (475), Expect = 6e-45
Identities = 105/170 (61%), Positives = 118/170 (69%)
Frame = -2
Query: 703 FQGFLNDLQDWXXXXXXXXXXXKAQSHEEKKKTGIVSEAKGVARKVPPADYSRNNAQQFD 524
FQGFLNDLQDW K +S K G ++G K AD SR+ + Q++
Sbjct: 16 FQGFLNDLQDWELLKDTDKKMKK-KSRASDVKIGEDGRSEG---KTSAADSSRSGSGQYE 71
Query: 523 YXXXXXXXXXXXSKLFAEESSPDAASEKELGNEYFKQKKFKEAIDCYSRSIALSPTAVAF 344
Y S +E + DA +EKELGNEYFKQKKF EAI+CYSRSIALSPTAVA+
Sbjct: 72 YSRNFGAINRLSSSFTTDEITVDATTEKELGNEYFKQKKFNEAIECYSRSIALSPTAVAY 131
Query: 343 ANRAMAYLKLKRFGEAETDCTEALNLDDRYIKAYSRRATARKELGKLKES 194
ANRAMAYLK+KRF EAE DCTEALNLDDRYIKAYSRRATARKELGKLKES
Sbjct: 132 ANRAMAYLKIKRFREAEDDCTEALNLDDRYIKAYSRRATARKELGKLKES 181
Score = 58.9 bits (141), Expect = 3e-06
Identities = 29/64 (45%), Positives = 41/64 (64%)
Frame = -3
Query: 222 GKNLESSKNPXXXXRLEPHNQELKKQYADAKALYDKELLAKASGMVGKSSVGEKAAGGTA 43
GK ES ++ +LEP+NQE+KKQYA+ K+LY+KE+L KASG + S G + G +
Sbjct: 176 GKLKESIEDSEFALKLEPNNQEIKKQYAEVKSLYEKEILQKASGTLRSSLQGTQQGGRSE 235
Query: 42 VKAN 31
N
Sbjct: 236 ASVN 239
>ref|XP_002894647.1| hypothetical protein ARALYDRAFT_474807 [Arabidopsis lyrata subsp.
lyrata] gi|297340489|gb|EFH70906.1| hypothetical protein
ARALYDRAFT_474807 [Arabidopsis lyrata subsp. lyrata]
Length = 472
Score = 162 bits (409), Expect(2) = 6e-45
Identities = 90/169 (53%), Positives = 109/169 (64%)
Frame = -2
Query: 700 QGFLNDLQDWXXXXXXXXXXXKAQSHEEKKKTGIVSEAKGVARKVPPADYSRNNAQQFDY 521
QGFLNDLQDW K K + + + + ++ + + Q+D+
Sbjct: 14 QGFLNDLQDWELSL--------------KDKDKKIKQQRDNSPNPSSENFRPSGSGQYDF 59
Query: 520 XXXXXXXXXXXSKLFAEESSPDAASEKELGNEYFKQKKFKEAIDCYSRSIALSPTAVAFA 341
S L E S D+ SEKE GNE+FKQKKF EAIDCYSRSIALSP A+A+A
Sbjct: 60 VKNYHSVRDLSSSLIGE-SLLDSNSEKEQGNEFFKQKKFNEAIDCYSRSIALSPNAIAYA 118
Query: 340 NRAMAYLKLKRFGEAETDCTEALNLDDRYIKAYSRRATARKELGKLKES 194
NRAMAYLK+KR+ EA+ DCTEALNLDDRYIKAYSRRATARKELG +KE+
Sbjct: 119 NRAMAYLKIKRYREADVDCTEALNLDDRYIKAYSRRATARKELGMIKEA 167
Score = 47.0 bits (110), Expect(2) = 6e-45
Identities = 21/40 (52%), Positives = 30/40 (75%)
Frame = -3
Query: 210 ESSKNPXXXXRLEPHNQELKKQYADAKALYDKELLAKASG 91
E+ ++ RLEP +QELKKQYAD K+L +KE++ KA+G
Sbjct: 166 EAKEDAEFALRLEPESQELKKQYADIKSLLEKEIIEKATG 205
>ref|XP_004495650.1| PREDICTED: RNA polymerase II-associated protein 3-like isoform X4
[Cicer arietinum]
Length = 454
Score = 187 bits (474), Expect = 8e-45
Identities = 102/170 (60%), Positives = 119/170 (70%)
Frame = -2
Query: 703 FQGFLNDLQDWXXXXXXXXXXXKAQSHEEKKKTGIVSEAKGVARKVPPADYSRNNAQQFD 524
FQGFLNDLQDW K+ + G+ + ++G D+++ +A Q+D
Sbjct: 3 FQGFLNDLQDWEISTKNKAPKTKSHKENSGRSVGVENGSRGDTISF---DHAKKSAAQYD 59
Query: 523 YXXXXXXXXXXXSKLFAEESSPDAASEKELGNEYFKQKKFKEAIDCYSRSIALSPTAVAF 344
+ S FA E PDAASEK+LGNE+FKQKKFKEAIDCYSRSIALSPTAVA+
Sbjct: 60 FSRNNDLLSRVTSS-FASEDVPDAASEKDLGNEFFKQKKFKEAIDCYSRSIALSPTAVAY 118
Query: 343 ANRAMAYLKLKRFGEAETDCTEALNLDDRYIKAYSRRATARKELGKLKES 194
ANRAMA +KL+RF EAE DCTEALNLDDRYIKAYSRRATARKELGK KES
Sbjct: 119 ANRAMARIKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKNKES 168
Score = 58.5 bits (140), Expect = 4e-06
Identities = 33/74 (44%), Positives = 44/74 (59%)
Frame = -3
Query: 222 GKNLESSKNPXXXXRLEPHNQELKKQYADAKALYDKELLAKASGMVGKSSVGEKAAGGTA 43
GKN ES ++ RLEP+NQE+KKQYADAK+LY+KE++ K S KA T
Sbjct: 163 GKNKESMEDAEFALRLEPNNQEVKKQYADAKSLYEKEIVHKTS----------KALRNTV 212
Query: 42 VKANRIKEMENGST 1
K + + NGS+
Sbjct: 213 QKLGKSETKVNGSS 226
>ref|NP_001185250.1| carboxylate clamp-tetratricopeptide repeat protein [Arabidopsis
thaliana] gi|332195275|gb|AEE33396.1| carboxylate
clamp-tetratricopeptide repeat [Arabidopsis thaliana]
Length = 494
Score = 161 bits (407), Expect(2) = 1e-44
Identities = 90/170 (52%), Positives = 107/170 (62%)
Frame = -2
Query: 703 FQGFLNDLQDWXXXXXXXXXXXKAQSHEEKKKTGIVSEAKGVARKVPPADYSRNNAQQFD 524
FQGF NDLQDW K K + + + + + + ++D
Sbjct: 16 FQGFFNDLQDWELSL--------------KDKDKKIKQQPANSSNPSSETFRPSGSGKYD 61
Query: 523 YXXXXXXXXXXXSKLFAEESSPDAASEKELGNEYFKQKKFKEAIDCYSRSIALSPTAVAF 344
+ S L ES D++SEKE GNE+FKQKKF EAIDCYSRSIALSP AV +
Sbjct: 62 FAKKYRSIRDLSSSLIG-ESLLDSSSEKEQGNEFFKQKKFNEAIDCYSRSIALSPNAVTY 120
Query: 343 ANRAMAYLKLKRFGEAETDCTEALNLDDRYIKAYSRRATARKELGKLKES 194
ANRAMAYLK+KR+ EAE DCTEALNLDDRYIKAYSRRATARKELG +KE+
Sbjct: 121 ANRAMAYLKIKRYREAEVDCTEALNLDDRYIKAYSRRATARKELGMIKEA 170
Score = 47.0 bits (110), Expect(2) = 1e-44
Identities = 21/40 (52%), Positives = 30/40 (75%)
Frame = -3
Query: 210 ESSKNPXXXXRLEPHNQELKKQYADAKALYDKELLAKASG 91
E+ ++ RLEP +QELKKQYAD K+L +KE++ KA+G
Sbjct: 169 EAKEDAEFALRLEPESQELKKQYADIKSLLEKEIIEKATG 208
>ref|NP_176039.2| carboxylate clamp-tetratricopeptide repeat protein [Arabidopsis
thaliana] gi|53828529|gb|AAU94374.1| At1g56440
[Arabidopsis thaliana] gi|59958350|gb|AAX12885.1|
At1g56440 [Arabidopsis thaliana]
gi|110743110|dbj|BAE99447.1| hypothetical protein
[Arabidopsis thaliana] gi|332195274|gb|AEE33395.1|
carboxylate clamp-tetratricopeptide repeat [Arabidopsis
thaliana]
Length = 476
Score = 161 bits (407), Expect(2) = 1e-44
Identities = 90/170 (52%), Positives = 107/170 (62%)
Frame = -2
Query: 703 FQGFLNDLQDWXXXXXXXXXXXKAQSHEEKKKTGIVSEAKGVARKVPPADYSRNNAQQFD 524
FQGF NDLQDW K K + + + + + + ++D
Sbjct: 16 FQGFFNDLQDWELSL--------------KDKDKKIKQQPANSSNPSSETFRPSGSGKYD 61
Query: 523 YXXXXXXXXXXXSKLFAEESSPDAASEKELGNEYFKQKKFKEAIDCYSRSIALSPTAVAF 344
+ S L ES D++SEKE GNE+FKQKKF EAIDCYSRSIALSP AV +
Sbjct: 62 FAKKYRSIRDLSSSLIG-ESLLDSSSEKEQGNEFFKQKKFNEAIDCYSRSIALSPNAVTY 120
Query: 343 ANRAMAYLKLKRFGEAETDCTEALNLDDRYIKAYSRRATARKELGKLKES 194
ANRAMAYLK+KR+ EAE DCTEALNLDDRYIKAYSRRATARKELG +KE+
Sbjct: 121 ANRAMAYLKIKRYREAEVDCTEALNLDDRYIKAYSRRATARKELGMIKEA 170
Score = 47.0 bits (110), Expect(2) = 1e-44
Identities = 21/40 (52%), Positives = 30/40 (75%)
Frame = -3
Query: 210 ESSKNPXXXXRLEPHNQELKKQYADAKALYDKELLAKASG 91
E+ ++ RLEP +QELKKQYAD K+L +KE++ KA+G
Sbjct: 169 EAKEDAEFALRLEPESQELKKQYADIKSLLEKEIIEKATG 208
>ref|XP_006302207.1| hypothetical protein CARUB_v10020218mg [Capsella rubella]
gi|482570917|gb|EOA35105.1| hypothetical protein
CARUB_v10020218mg [Capsella rubella]
Length = 478
Score = 163 bits (412), Expect(2) = 5e-44
Identities = 91/170 (53%), Positives = 109/170 (64%)
Frame = -2
Query: 703 FQGFLNDLQDWXXXXXXXXXXXKAQSHEEKKKTGIVSEAKGVARKVPPADYSRNNAQQFD 524
FQGFLNDLQDW K K + + + + + + + Q+D
Sbjct: 16 FQGFLNDLQDWELSL--------------KDKDKKIKQKPSNSSNLNSEKFKPSGSGQYD 61
Query: 523 YXXXXXXXXXXXSKLFAEESSPDAASEKELGNEYFKQKKFKEAIDCYSRSIALSPTAVAF 344
+ S L E S D++SEKE GNE+FKQKKF EAIDCYSRS+ALS AVA+
Sbjct: 62 FVKNYSSISDLSSSLIGE-SLLDSSSEKEQGNEFFKQKKFNEAIDCYSRSLALSANAVAY 120
Query: 343 ANRAMAYLKLKRFGEAETDCTEALNLDDRYIKAYSRRATARKELGKLKES 194
ANRAMAYLK+KR+ EAE DCTEALNLDDRYIKAYSRRATARKELG +KE+
Sbjct: 121 ANRAMAYLKIKRYREAEVDCTEALNLDDRYIKAYSRRATARKELGMIKEA 170
Score = 42.7 bits (99), Expect(2) = 5e-44
Identities = 19/40 (47%), Positives = 30/40 (75%)
Frame = -3
Query: 210 ESSKNPXXXXRLEPHNQELKKQYADAKALYDKELLAKASG 91
E+ ++ RLEP ++ELKKQYA+ K+L +KE++ KA+G
Sbjct: 169 EAKEDAEFALRLEPASEELKKQYANIKSLLEKEIVEKATG 208
>ref|XP_004495648.1| PREDICTED: RNA polymerase II-associated protein 3-like isoform X2
[Cicer arietinum]
Length = 459
Score = 184 bits (467), Expect = 5e-44
Identities = 104/174 (59%), Positives = 119/174 (68%), Gaps = 4/174 (2%)
Frame = -2
Query: 703 FQGFLNDLQDWXXXXXXXXXXXKAQSHEEKKKTGIVSEAKGVAR----KVPPADYSRNNA 536
FQGFLNDLQDW +SH+E + + GV D+++ +A
Sbjct: 3 FQGFLNDLQDWEISTKNKAPK--TKSHKENGSSSQSGRSVGVENGSRGDTISFDHAKKSA 60
Query: 535 QQFDYXXXXXXXXXXXSKLFAEESSPDAASEKELGNEYFKQKKFKEAIDCYSRSIALSPT 356
Q+D+ S FA E PDAASEK+LGNE+FKQKKFKEAIDCYSRSIALSPT
Sbjct: 61 AQYDFSRNNDLLSRVTSS-FASEDVPDAASEKDLGNEFFKQKKFKEAIDCYSRSIALSPT 119
Query: 355 AVAFANRAMAYLKLKRFGEAETDCTEALNLDDRYIKAYSRRATARKELGKLKES 194
AVA+ANRAMA +KL+RF EAE DCTEALNLDDRYIKAYSRRATARKELGK KES
Sbjct: 120 AVAYANRAMARIKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKNKES 173
Score = 58.5 bits (140), Expect = 4e-06
Identities = 33/74 (44%), Positives = 44/74 (59%)
Frame = -3
Query: 222 GKNLESSKNPXXXXRLEPHNQELKKQYADAKALYDKELLAKASGMVGKSSVGEKAAGGTA 43
GKN ES ++ RLEP+NQE+KKQYADAK+LY+KE++ K S KA T
Sbjct: 168 GKNKESMEDAEFALRLEPNNQEVKKQYADAKSLYEKEIVHKTS----------KALRNTV 217
Query: 42 VKANRIKEMENGST 1
K + + NGS+
Sbjct: 218 QKLGKSETKVNGSS 231
>ref|XP_004495647.1| PREDICTED: RNA polymerase II-associated protein 3-like isoform X1
[Cicer arietinum]
Length = 461
Score = 184 bits (467), Expect = 5e-44
Identities = 104/174 (59%), Positives = 119/174 (68%), Gaps = 4/174 (2%)
Frame = -2
Query: 703 FQGFLNDLQDWXXXXXXXXXXXKAQSHEEKKKTGIVSEAKGVAR----KVPPADYSRNNA 536
FQGFLNDLQDW +SH+E + + GV D+++ +A
Sbjct: 3 FQGFLNDLQDWEISTKNKAPK--TKSHKENGSSSQSGRSVGVENGSRGDTISFDHAKKSA 60
Query: 535 QQFDYXXXXXXXXXXXSKLFAEESSPDAASEKELGNEYFKQKKFKEAIDCYSRSIALSPT 356
Q+D+ S FA E PDAASEK+LGNE+FKQKKFKEAIDCYSRSIALSPT
Sbjct: 61 AQYDFSRNNDLLSRVTSS-FASEDVPDAASEKDLGNEFFKQKKFKEAIDCYSRSIALSPT 119
Query: 355 AVAFANRAMAYLKLKRFGEAETDCTEALNLDDRYIKAYSRRATARKELGKLKES 194
AVA+ANRAMA +KL+RF EAE DCTEALNLDDRYIKAYSRRATARKELGK KES
Sbjct: 120 AVAYANRAMARIKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKNKES 173
Score = 58.5 bits (140), Expect = 4e-06
Identities = 33/74 (44%), Positives = 44/74 (59%)
Frame = -3
Query: 222 GKNLESSKNPXXXXRLEPHNQELKKQYADAKALYDKELLAKASGMVGKSSVGEKAAGGTA 43
GKN ES ++ RLEP+NQE+KKQYADAK+LY+KE++ K S KA T
Sbjct: 168 GKNKESMEDAEFALRLEPNNQEVKKQYADAKSLYEKEIVHKTS----------KALRNTV 217
Query: 42 VKANRIKEMENGST 1
K + + NGS+
Sbjct: 218 QKLGKSETKVNGSS 231
>ref|XP_004495649.1| PREDICTED: RNA polymerase II-associated protein 3-like isoform X3
[Cicer arietinum]
Length = 458
Score = 180 bits (456), Expect = 1e-42
Identities = 102/172 (59%), Positives = 117/172 (68%), Gaps = 4/172 (2%)
Frame = -2
Query: 697 GFLNDLQDWXXXXXXXXXXXKAQSHEEKKKTGIVSEAKGVAR----KVPPADYSRNNAQQ 530
GFLNDLQDW +SH+E + + GV D+++ +A Q
Sbjct: 2 GFLNDLQDWEISTKNKAPK--TKSHKENGSSSQSGRSVGVENGSRGDTISFDHAKKSAAQ 59
Query: 529 FDYXXXXXXXXXXXSKLFAEESSPDAASEKELGNEYFKQKKFKEAIDCYSRSIALSPTAV 350
+D+ S FA E PDAASEK+LGNE+FKQKKFKEAIDCYSRSIALSPTAV
Sbjct: 60 YDFSRNNDLLSRVTSS-FASEDVPDAASEKDLGNEFFKQKKFKEAIDCYSRSIALSPTAV 118
Query: 349 AFANRAMAYLKLKRFGEAETDCTEALNLDDRYIKAYSRRATARKELGKLKES 194
A+ANRAMA +KL+RF EAE DCTEALNLDDRYIKAYSRRATARKELGK KES
Sbjct: 119 AYANRAMARIKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKNKES 170
Score = 58.5 bits (140), Expect = 4e-06
Identities = 33/74 (44%), Positives = 44/74 (59%)
Frame = -3
Query: 222 GKNLESSKNPXXXXRLEPHNQELKKQYADAKALYDKELLAKASGMVGKSSVGEKAAGGTA 43
GKN ES ++ RLEP+NQE+KKQYADAK+LY+KE++ K S KA T
Sbjct: 165 GKNKESMEDAEFALRLEPNNQEVKKQYADAKSLYEKEIVHKTS----------KALRNTV 214
Query: 42 VKANRIKEMENGST 1
K + + NGS+
Sbjct: 215 QKLGKSETKVNGSS 228
>ref|XP_006588434.1| PREDICTED: uncharacterized protein LOC100784528 isoform X1 [Glycine
max]
Length = 459
Score = 179 bits (454), Expect = 2e-42
Identities = 102/170 (60%), Positives = 114/170 (67%)
Frame = -2
Query: 703 FQGFLNDLQDWXXXXXXXXXXXKAQSHEEKKKTGIVSEAKGVARKVPPADYSRNNAQQFD 524
FQGFLNDLQDW K ++ + TG V K D +RN+ Q+D
Sbjct: 3 FQGFLNDLQDWELSRKDKTRAQK-ENASSSQLTGSVGVEKASKGDTISFDRARNSPGQYD 61
Query: 523 YXXXXXXXXXXXSKLFAEESSPDAASEKELGNEYFKQKKFKEAIDCYSRSIALSPTAVAF 344
S F E PDA SEK+LGNE+FKQKKFKEA DCYSRSIALSPTAVA+
Sbjct: 62 LSRINDPFNRVHSS-FVPEDVPDAVSEKDLGNEFFKQKKFKEARDCYSRSIALSPTAVAY 120
Query: 343 ANRAMAYLKLKRFGEAETDCTEALNLDDRYIKAYSRRATARKELGKLKES 194
ANRAMA +KL+RF EAE DCTEALNLDDRYIKAYSRRATARKELGK+KES
Sbjct: 121 ANRAMANIKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKIKES 170
Score = 58.5 bits (140), Expect = 4e-06
Identities = 30/64 (46%), Positives = 42/64 (65%)
Frame = -3
Query: 222 GKNLESSKNPXXXXRLEPHNQELKKQYADAKALYDKELLAKASGMVGKSSVGEKAAGGTA 43
GK ES + RLEP+NQE+KKQYADAK+LY+K++L KASG + + G + + +
Sbjct: 165 GKIKESMDDAAFALRLEPNNQEIKKQYADAKSLYEKDILQKASGALRSTVQGTQKSQKSE 224
Query: 42 VKAN 31
K N
Sbjct: 225 EKIN 228