BLASTX nr result

ID: Sinomenium21_contig00035852 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00035852
         (286 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007017834.1| Transcription elongation factor family prote...    66   6e-09
ref|XP_006473679.1| PREDICTED: uncharacterized protein LOC102609...    63   5e-08
ref|XP_006435201.1| hypothetical protein CICLE_v10000122mg [Citr...    63   5e-08
emb|CBI37887.3| unnamed protein product [Vitis vinifera]               59   9e-07
emb|CAN71031.1| hypothetical protein VITISV_002735 [Vitis vinifera]    59   9e-07
ref|XP_002300698.1| hypothetical protein POPTR_0002s02150g [Popu...    58   1e-06
ref|XP_007227659.1| hypothetical protein PRUPE_ppa000877mg [Prun...    57   3e-06

>ref|XP_007017834.1| Transcription elongation factor family protein, putative isoform 1
           [Theobroma cacao] gi|590594380|ref|XP_007017835.1|
           Transcription elongation factor family protein, putative
           isoform 1 [Theobroma cacao] gi|508723162|gb|EOY15059.1|
           Transcription elongation factor family protein, putative
           isoform 1 [Theobroma cacao] gi|508723163|gb|EOY15060.1|
           Transcription elongation factor family protein, putative
           isoform 1 [Theobroma cacao]
          Length = 1024

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 39/90 (43%), Positives = 48/90 (53%)
 Frame = -1

Query: 274 LEKTPSIEGMSQGSKQRQSFLNIDLNVTDGDNEGGTDLPQARQIPVSSELAXXXXXXXXX 95
           ++KT SI G S GSKQR   L+ DLNV +  +E G +L   +Q+  SS L          
Sbjct: 666 VDKTLSIGGTSSGSKQRLDCLDFDLNVAEAGDEKGAELMSGKQVTASSGLHSAESSLDVS 725

Query: 94  XXXXXRLKFDLNRIDDHEDAPLSDWRREGR 5
                RLK DLNR+ D  DAP  D R EGR
Sbjct: 726 PRKSERLKLDLNRMSDDGDAPALDTRLEGR 755


>ref|XP_006473679.1| PREDICTED: uncharacterized protein LOC102609950 [Citrus sinensis]
          Length = 1038

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 38/84 (45%), Positives = 45/84 (53%)
 Frame = -1

Query: 256 IEGMSQGSKQRQSFLNIDLNVTDGDNEGGTDLPQARQIPVSSELAXXXXXXXXXXXXXXR 77
           + G +  SKQRQ  L+IDLNV + ++E   DL   +QIPVSS L               R
Sbjct: 686 VGGANNSSKQRQDCLDIDLNVAESEDEKLADLIPEKQIPVSSGLQSAESSVEVSPRRSER 745

Query: 76  LKFDLNRIDDHEDAPLSDWRREGR 5
           L  DLNRI D  DAP SD R E R
Sbjct: 746 LNLDLNRISDDSDAPPSDLRMERR 769


>ref|XP_006435201.1| hypothetical protein CICLE_v10000122mg [Citrus clementina]
           gi|557537323|gb|ESR48441.1| hypothetical protein
           CICLE_v10000122mg [Citrus clementina]
          Length = 1038

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 38/84 (45%), Positives = 45/84 (53%)
 Frame = -1

Query: 256 IEGMSQGSKQRQSFLNIDLNVTDGDNEGGTDLPQARQIPVSSELAXXXXXXXXXXXXXXR 77
           + G +  SKQRQ  L+IDLNV + ++E   DL   +QIPVSS L               R
Sbjct: 686 VGGANNSSKQRQDCLDIDLNVAESEDEKLADLIPEKQIPVSSGLQSAESSVEVSPRRSER 745

Query: 76  LKFDLNRIDDHEDAPLSDWRREGR 5
           L  DLNRI D  DAP SD R E R
Sbjct: 746 LNLDLNRISDDSDAPPSDLRMERR 769


>emb|CBI37887.3| unnamed protein product [Vitis vinifera]
          Length = 943

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 38/86 (44%), Positives = 42/86 (48%)
 Frame = -1

Query: 268 KTPSIEGMSQGSKQRQSFLNIDLNVTDGDNEGGTDLPQARQIPVSSELAXXXXXXXXXXX 89
           KT S EG S   KQRQ  L IDLNV D   +G  D     QIP SS +            
Sbjct: 594 KTVSAEGSSYSLKQRQDLLEIDLNVADDGVDGAADTIITDQIPASSGIISGESLVEVNSK 653

Query: 88  XXXRLKFDLNRIDDHEDAPLSDWRRE 11
              RL  DLNR+ D +DAP S  RRE
Sbjct: 654 RAERLNLDLNRVGDDDDAP-SSHRRE 678


>emb|CAN71031.1| hypothetical protein VITISV_002735 [Vitis vinifera]
          Length = 943

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 38/86 (44%), Positives = 42/86 (48%)
 Frame = -1

Query: 268 KTPSIEGMSQGSKQRQSFLNIDLNVTDGDNEGGTDLPQARQIPVSSELAXXXXXXXXXXX 89
           KT S EG S   KQRQ  L IDLNV D   +G  D     QIP SS +            
Sbjct: 594 KTVSAEGSSYSLKQRQDLLEIDLNVADDGVDGAADTIITDQIPASSGIISGESLVEVNSK 653

Query: 88  XXXRLKFDLNRIDDHEDAPLSDWRRE 11
              RL  DLNR+ D +DAP S  RRE
Sbjct: 654 RAERLNLDLNRVGDDDDAP-SSHRRE 678


>ref|XP_002300698.1| hypothetical protein POPTR_0002s02150g [Populus trichocarpa]
           gi|222842424|gb|EEE79971.1| hypothetical protein
           POPTR_0002s02150g [Populus trichocarpa]
          Length = 1011

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 38/88 (43%), Positives = 44/88 (50%)
 Frame = -1

Query: 268 KTPSIEGMSQGSKQRQSFLNIDLNVTDGDNEGGTDLPQARQIPVSSELAXXXXXXXXXXX 89
           +T    G S  SKQRQ  L+IDLNV +G  E   DL  +RQIPVSS              
Sbjct: 659 ETVEAGGSSNCSKQRQVCLDIDLNVAEGGEEKVVDLISSRQIPVSSGFHSGESSLEVGSR 718

Query: 88  XXXRLKFDLNRIDDHEDAPLSDWRREGR 5
              R   DLNR  D  DA L+D R EG+
Sbjct: 719 RPERPNLDLNRTSDDGDASLTDLRMEGQ 746


>ref|XP_007227659.1| hypothetical protein PRUPE_ppa000877mg [Prunus persica]
           gi|462424595|gb|EMJ28858.1| hypothetical protein
           PRUPE_ppa000877mg [Prunus persica]
          Length = 973

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 42/90 (46%), Positives = 46/90 (51%)
 Frame = -1

Query: 271 EKTPSIEGMSQGSKQRQSFLNIDLNVTDGDNEGGTDLPQARQIPVSSELAXXXXXXXXXX 92
           +K  S    S GSKQR   L+IDLNV     EGG DL   +QIPVSS L           
Sbjct: 619 DKNLSTGATSDGSKQRLDCLDIDLNVA----EGGDDL--GKQIPVSSGLPSGESSVEVSQ 672

Query: 91  XXXXRLKFDLNRIDDHEDAPLSDWRREGRF 2
               R   DLNRIDD  DA  SD R EG+F
Sbjct: 673 NRSGRPNLDLNRIDDDGDALPSDLRVEGQF 702


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