BLASTX nr result
ID: Sinomenium21_contig00035713
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00035713
(269 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006581311.1| PREDICTED: pentatricopeptide repeat-containi... 65 8e-09
ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 64 3e-08
ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containi... 64 3e-08
ref|XP_002516159.1| pentatricopeptide repeat-containing protein,... 55 1e-07
ref|XP_007136902.1| hypothetical protein PHAVU_009G083700g [Phas... 62 1e-07
ref|XP_004305608.1| PREDICTED: pentatricopeptide repeat-containi... 62 1e-07
ref|XP_006578098.1| PREDICTED: pentatricopeptide repeat-containi... 60 4e-07
ref|XP_004501417.1| PREDICTED: pentatricopeptide repeat-containi... 60 4e-07
ref|XP_003603234.1| Pentatricopeptide repeat-containing protein ... 59 9e-07
ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containi... 57 2e-06
emb|CBI20738.3| unnamed protein product [Vitis vinifera] 57 2e-06
emb|CAN66439.1| hypothetical protein VITISV_035236 [Vitis vinifera] 57 2e-06
ref|NP_195043.1| pentatricopeptide repeat-containing protein [Ar... 56 6e-06
>ref|XP_006581311.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Glycine max]
Length = 981
Score = 65.5 bits (158), Expect = 8e-09
Identities = 31/45 (68%), Positives = 36/45 (80%)
Frame = -2
Query: 136 WFPILRASVARNDLLLGKLAHARIITSGQQQNRFLTNNLINMYSK 2
WF ILR ++A +DL LGK AHARI+TSG +RFLTNNLI MYSK
Sbjct: 28 WFSILRHAIAASDLPLGKRAHARILTSGHHPDRFLTNNLITMYSK 72
>ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g33170-like [Cucumis sativus]
Length = 1573
Score = 63.5 bits (153), Expect = 3e-08
Identities = 29/45 (64%), Positives = 36/45 (80%)
Frame = -2
Query: 136 WFPILRASVARNDLLLGKLAHARIITSGQQQNRFLTNNLINMYSK 2
WF +LR+++A DL LGK AHARI+TSG +R+LTNNLI MYSK
Sbjct: 614 WFSLLRSAIAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSK 658
>ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 1573
Score = 63.5 bits (153), Expect = 3e-08
Identities = 29/45 (64%), Positives = 36/45 (80%)
Frame = -2
Query: 136 WFPILRASVARNDLLLGKLAHARIITSGQQQNRFLTNNLINMYSK 2
WF +LR+++A DL LGK AHARI+TSG +R+LTNNLI MYSK
Sbjct: 614 WFSLLRSAIAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSK 658
>ref|XP_002516159.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223544645|gb|EEF46161.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 1439
Score = 54.7 bits (130), Expect(2) = 1e-07
Identities = 27/44 (61%), Positives = 33/44 (75%)
Frame = -2
Query: 133 FPILRASVARNDLLLGKLAHARIITSGQQQNRFLTNNLINMYSK 2
F +LRA+V+ ++L LGK HA IITSG +RFL NNLI MYSK
Sbjct: 708 FSLLRAAVSTSNLHLGKCIHANIITSGLTSDRFLANNLITMYSK 751
Score = 26.9 bits (58), Expect(2) = 1e-07
Identities = 16/43 (37%), Positives = 26/43 (60%)
Frame = -1
Query: 236 EMVLQAHPLQPLSFSRYSLPSEHSLLFIFFYIAVVSNPSSLRC 108
EM+L+++ L+P S P +SLL F + +S+PSS +C
Sbjct: 666 EMLLKSN-LKPDSIFSLKSPHSYSLLSFPFRFSSLSSPSSSQC 707
>ref|XP_007136902.1| hypothetical protein PHAVU_009G083700g [Phaseolus vulgaris]
gi|561009989|gb|ESW08896.1| hypothetical protein
PHAVU_009G083700g [Phaseolus vulgaris]
Length = 988
Score = 61.6 bits (148), Expect = 1e-07
Identities = 29/45 (64%), Positives = 34/45 (75%)
Frame = -2
Query: 136 WFPILRASVARNDLLLGKLAHARIITSGQQQNRFLTNNLINMYSK 2
WF ILR ++A +DL LGK AHA I+TSG RFLTNNLI MY+K
Sbjct: 37 WFSILRHAIAASDLPLGKRAHAGILTSGHHSERFLTNNLITMYAK 81
>ref|XP_004305608.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Fragaria vesca subsp. vesca]
Length = 1625
Score = 61.6 bits (148), Expect = 1e-07
Identities = 29/46 (63%), Positives = 34/46 (73%)
Frame = -2
Query: 139 PWFPILRASVARNDLLLGKLAHARIITSGQQQNRFLTNNLINMYSK 2
PWF ILR ++A DL LGK AHA I+TSGQ + FL NNLI MY+K
Sbjct: 652 PWFSILRTAIANTDLPLGKRAHALILTSGQCPDHFLINNLITMYAK 697
>ref|XP_006578098.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Glycine max]
Length = 980
Score = 59.7 bits (143), Expect = 4e-07
Identities = 28/44 (63%), Positives = 35/44 (79%)
Frame = -2
Query: 133 FPILRASVARNDLLLGKLAHARIITSGQQQNRFLTNNLINMYSK 2
F ILR ++A +DL LGK AHARI+TSG +RF+TNNLI MY+K
Sbjct: 29 FSILRQAIAASDLSLGKRAHARILTSGHHPDRFVTNNLITMYAK 72
>ref|XP_004501417.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like isoform X1 [Cicer arietinum]
gi|502132556|ref|XP_004501418.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g33170-like isoform X2 [Cicer arietinum]
Length = 992
Score = 59.7 bits (143), Expect = 4e-07
Identities = 28/45 (62%), Positives = 34/45 (75%)
Frame = -2
Query: 136 WFPILRASVARNDLLLGKLAHARIITSGQQQNRFLTNNLINMYSK 2
WF ILR ++A +DLLLGK HA I+TSG + FLTNNLI MY+K
Sbjct: 37 WFSILRHAIAASDLLLGKRTHALILTSGHTPDLFLTNNLITMYAK 81
>ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492282|gb|AES73485.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 973
Score = 58.5 bits (140), Expect = 9e-07
Identities = 26/45 (57%), Positives = 35/45 (77%)
Frame = -2
Query: 136 WFPILRASVARNDLLLGKLAHARIITSGQQQNRFLTNNLINMYSK 2
WF ILR ++A +DL+LGK HA I+TSG +R++TNNLI MY+K
Sbjct: 16 WFSILRHAIADSDLILGKRTHAVIVTSGLNPDRYVTNNLITMYAK 60
>ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
[Vitis vinifera]
Length = 1580
Score = 57.4 bits (137), Expect = 2e-06
Identities = 24/45 (53%), Positives = 34/45 (75%)
Frame = -2
Query: 136 WFPILRASVARNDLLLGKLAHARIITSGQQQNRFLTNNLINMYSK 2
WF +LR +++ ++LLLGK HARI+ SG + FL+NNL+ MYSK
Sbjct: 624 WFSLLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSK 668
>emb|CBI20738.3| unnamed protein product [Vitis vinifera]
Length = 865
Score = 57.4 bits (137), Expect = 2e-06
Identities = 24/45 (53%), Positives = 34/45 (75%)
Frame = -2
Query: 136 WFPILRASVARNDLLLGKLAHARIITSGQQQNRFLTNNLINMYSK 2
WF +LR +++ ++LLLGK HARI+ SG + FL+NNL+ MYSK
Sbjct: 80 WFSLLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSK 124
>emb|CAN66439.1| hypothetical protein VITISV_035236 [Vitis vinifera]
Length = 2076
Score = 57.4 bits (137), Expect = 2e-06
Identities = 24/45 (53%), Positives = 34/45 (75%)
Frame = -2
Query: 136 WFPILRASVARNDLLLGKLAHARIITSGQQQNRFLTNNLINMYSK 2
WF +LR +++ ++LLLGK HARI+ SG + FLTNNL+ +YSK
Sbjct: 87 WFSLLRTAISTHNLLLGKCTHARIVVSGTAGDHFLTNNLLTLYSK 131
>ref|NP_195043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206840|sp|Q9SMZ2.1|PP347_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At4g33170 gi|4455331|emb|CAB36791.1| putative protein
[Arabidopsis thaliana] gi|7270265|emb|CAB80034.1|
putative protein [Arabidopsis thaliana]
gi|332660786|gb|AEE86186.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 990
Score = 55.8 bits (133), Expect = 6e-06
Identities = 25/45 (55%), Positives = 32/45 (71%)
Frame = -2
Query: 136 WFPILRASVARNDLLLGKLAHARIITSGQQQNRFLTNNLINMYSK 2
WF LR ++ +DL+LGK HARI+T + RFL NNLI+MYSK
Sbjct: 42 WFGFLRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSK 86