BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00035647
         (848 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAB39942.1| putative protein [Arabidopsis thaliana] gi|72678...    62   3e-07
emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thal...    61   6e-07
dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]              60   1e-06
dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]              60   1e-06
dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]              60   1e-06
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]                59   2e-06
gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thal...    59   2e-06
gb|AAG51098.1|AC025295_6 hypothetical protein [Arabidopsis thali...    58   4e-06
dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like ...    58   5e-06
gb|ABW81051.1| tn7 reverse transcriptase [Arabidopsis lyrata sub...    57   7e-06
emb|CAB72467.1| putative protein [Arabidopsis thaliana]                57   9e-06

>emb|CAB39942.1| putative protein [Arabidopsis thaliana] gi|7267871|emb|CAB78214.1|
           putative protein [Arabidopsis thaliana]
          Length = 473

 Score = 62.0 bits (149), Expect = 3e-07
 Identities = 38/105 (36%), Positives = 58/105 (55%), Gaps = 9/105 (8%)
 Frame = -2

Query: 568 IRKTCLGFLFPTGSCSLRSIHFTSWSIFCYPKEEGGFGLRRVV----LV*GGWLW-ISTN 404
           I K C  +L+  G  +      T W+  C PKEEGG GLR +     +     +W I ++
Sbjct: 88  IDKMCSAYLWSGGELNTSKAKIT-WAFVCKPKEEGGLGLRSLKEANDVCCLKLIWRIISH 146

Query: 403 KESLWIKWINGTYLKTQSI*TFSSIKD----FSWVWRKILKYRNL 281
            +SLW+KWI  + LK  S   F ++++     SW+WRKILK+R++
Sbjct: 147 ADSLWVKWIQSSLLKKVS---FWAVRENTSLGSWMWRKILKFRDI 188


>emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thaliana]
           gi|7267919|emb|CAB78261.1| putative reverse
           transcriptase [Arabidopsis thaliana]
          Length = 662

 Score = 60.8 bits (146), Expect = 6e-07
 Identities = 35/104 (33%), Positives = 51/104 (49%), Gaps = 5/104 (4%)
 Frame = -2

Query: 568 IRKTCLGFLFPTGSCSLRSIHFTSWSIFCYPKEEGGFGLRRVVLV*G----GWLW-ISTN 404
           I K C  FL+     S       +W   C PK EGG GL+ +           +W I + 
Sbjct: 357 IDKLCSAFLWSGPELSTNKAKI-AWETVCRPKREGGLGLQSIKEANDVCCLKLIWRIVSQ 415

Query: 403 KESLWIKWINGTYLKTQSI*TFSSIKDFSWVWRKILKYRNLLEA 272
            +SLW++WI    LK  +  +F S    SW+W+K+LKYR+  +A
Sbjct: 416 GDSLWVQWIRTYLLKRNTFWSFRSASQGSWMWKKLLKYRDTAKA 459


>dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]
          Length = 1898

 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 35/103 (33%), Positives = 52/103 (50%), Gaps = 6/103 (5%)
 Frame = -2

Query: 568  IRKTCLGFLFPTGSCSLRSIHFTSWSIFCYPKEEGGFGLR------RVVLV*GGWLWIST 407
            I KTC  FL+   + + R +H  +W+  C P+ EGG GLR      R  L    W  I +
Sbjct: 1354 IDKTCRNFLWGHDT-NTRKLHSVNWAEICKPRNEGGLGLRMARDFNRAFLTKMAWQ-IFS 1411

Query: 406  NKESLWIKWINGTYLKTQSI*TFSSIKDFSWVWRKILKYRNLL 278
            N + LW+K +   Y+K        S  + SW WR I+K +++L
Sbjct: 1412 NIDKLWVKVLREKYVKNADFLHLQSQSNCSWGWRSIMKGKDVL 1454


>dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 35/103 (33%), Positives = 52/103 (50%), Gaps = 6/103 (5%)
 Frame = -2

Query: 568  IRKTCLGFLFPTGSCSLRSIHFTSWSIFCYPKEEGGFGLR------RVVLV*GGWLWIST 407
            I KTC  FL+   + + R +H  +W+  C P+ EGG GLR      R  L    W  I +
Sbjct: 822  IDKTCRNFLWGHDT-NTRKLHSVNWAEICKPRNEGGLGLRMARDFNRAFLTKMAWQ-IFS 879

Query: 406  NKESLWIKWINGTYLKTQSI*TFSSIKDFSWVWRKILKYRNLL 278
            N + LW+K +   Y+K        S  + SW WR I+K +++L
Sbjct: 880  NIDKLWVKVLREKYVKNADFLHLQSQSNCSWGWRSIMKGKDVL 922


>dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 35/103 (33%), Positives = 52/103 (50%), Gaps = 6/103 (5%)
 Frame = -2

Query: 568  IRKTCLGFLFPTGSCSLRSIHFTSWSIFCYPKEEGGFGLR------RVVLV*GGWLWIST 407
            I KTC  FL+   + + R +H  +W+  C P+ EGG GLR      R  L    W  I +
Sbjct: 822  IDKTCRNFLWGHDT-NTRKLHSVNWAEICKPRNEGGLGLRMARDFNRAFLTKMAWQ-IFS 879

Query: 406  NKESLWIKWINGTYLKTQSI*TFSSIKDFSWVWRKILKYRNLL 278
            N + LW+K +   Y+K        S  + SW WR I+K +++L
Sbjct: 880  NIDKLWVKVLREKYVKNADFLHLQSQSNCSWGWRSIMKGKDVL 922


>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
          Length = 872

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 40/106 (37%), Positives = 52/106 (49%), Gaps = 7/106 (6%)
 Frame = -2

Query: 568 IRKTCLGFLFPTGSCSLRSIHFTSWSIFCYPKEEGGFGLRR------VVLV*GGWLWIST 407
           I K C  FL+     S       SW I C PK EGG GLR       V  +   W  IS 
Sbjct: 486 IDKLCSSFLWSGSEMSSHKAKI-SWDIVCKPKAEGGLGLRNLKEANDVSCLKLVWRIIS- 543

Query: 406 NKESLWIKWINGTYLKTQSI*TF-SSIKDFSWVWRKILKYRNLLEA 272
           N  SLW KW+    ++ +SI +   S    SW+WRKILK R++ ++
Sbjct: 544 NSNSLWTKWVAEYLIRKKSIWSLKQSTSMGSWIWRKILKIRDVAKS 589


>gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thaliana]
          Length = 629

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 35/100 (35%), Positives = 51/100 (51%), Gaps = 6/100 (6%)
 Frame = -2

Query: 568 IRKTCLGFLFPTGSCSLRSIHFTSWSIFCYPKEEGGFGLRRV----VLV*GGWLW-ISTN 404
           I   C  FL+       R     SW   C PK+EGG GLR +    V+     +W +++N
Sbjct: 244 INSICSAFLWSGPELHRRKAK-VSWDDICKPKQEGGLGLRSLTEANVVSVLKLIWRVTSN 302

Query: 403 KESLWIKWINGTYLKTQSI*TFSSIKDF-SWVWRKILKYR 287
            +SLW+KW     LK +S  + +      SW+W+K+LKYR
Sbjct: 303 DDSLWVKWSKMNLLKQESFWSLTPNSSLGSWMWKKMLKYR 342


>gb|AAG51098.1|AC025295_6 hypothetical protein [Arabidopsis thaliana]
          Length = 504

 Score = 58.2 bits (139), Expect = 4e-06
 Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 9/105 (8%)
 Frame = -2

Query: 568 IRKTCLGFLFPTGSCSLRSIHFTSWSIFCYPKEEGGFGLRRVV----LV*GGWLW-ISTN 404
           I K C  +L+  G  +       +W+  C PKEEGG GLR +     +     +W I ++
Sbjct: 169 IDKMCSAYLWSGGELNTSKAKI-AWAFVCKPKEEGGLGLRSLKEANDVCCLKLIWRIISH 227

Query: 403 KESLWIKWINGTYLKTQSI*TFSSIKD----FSWVWRKILKYRNL 281
            +SLW+KWI  + LK      F ++++     SW+WRKILK+R++
Sbjct: 228 ADSLWVKWIQSSLLKKV---FFWAVRENTSLGSWMWRKILKFRDI 269


>dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 489

 Score = 57.8 bits (138), Expect = 5e-06
 Identities = 35/104 (33%), Positives = 57/104 (54%), Gaps = 9/104 (8%)
 Frame = -2

Query: 568 IRKTCLGFLFPTGSCSLRSIHFTSWSIFCYPKEEGGFGLRRVVLV*G----GWLW-ISTN 404
           I K C  +L+  G  +       +W+  C PK+EGG GLR +           +W I ++
Sbjct: 221 IDKMCSAYLWSGGDLNTSKAKI-AWTDVCKPKDEGGLGLRSLKEANDVSCLKLIWRIISH 279

Query: 403 KESLWIKWINGTYLKTQSI*TFSSIKD----FSWVWRKILKYRN 284
            +SLW+KWI+ T LK  S   F ++++     SW+W+K+LK+R+
Sbjct: 280 ADSLWVKWIHATLLKQVS---FWAVRENTSLGSWMWKKVLKFRD 320


>gb|ABW81051.1| tn7 reverse transcriptase [Arabidopsis lyrata subsp. lyrata]
          Length = 441

 Score = 57.4 bits (137), Expect = 7e-06
 Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 8/81 (9%)
 Frame = -2

Query: 499 SWSIFCYPKEEGGFGLRRVV----LV*GGWLWISTNKESLWIKWINGTYLKTQSI*TFSS 332
           SW+  C PKEEGG GLR +     +     +W   +  SLW++W+    ++  S   F S
Sbjct: 81  SWNDVCMPKEEGGLGLRSLTEANKVCCLKLIWRLLSSSSLWVQWLRQYVIRKGS---FWS 137

Query: 331 IKDF----SWVWRKILKYRNL 281
           ++D     SW+WRK+LKYR+L
Sbjct: 138 LRDTSTLGSWMWRKLLKYRHL 158


>emb|CAB72467.1| putative protein [Arabidopsis thaliana]
          Length = 762

 Score = 57.0 bits (136), Expect = 9e-06
 Identities = 38/106 (35%), Positives = 54/106 (50%), Gaps = 10/106 (9%)
 Frame = -2

Query: 568 IRKTCLGFLFPTGSCSLRSIHFTSWSIFCYPKEEGGFGLRR------VVLV*GGWLWIST 407
           I K C  FL+   + + +     SW+  C PK EGG GLR       V  +   W  IS 
Sbjct: 392 IEKLCSSFLWSGTNLNSKKAKI-SWNQVCKPKSEGGLGLRSLKEANDVCCLKLVWRIIS- 449

Query: 406 NKESLWIKWINGTYLKTQSI*TFSSIKD----FSWVWRKILKYRNL 281
           + +SLW+KW+    LK +    F  +K+     SW+W+KILKYR +
Sbjct: 450 HGDSLWVKWVEHNLLKRE---IFWIVKENANLGSWIWKKILKYRGV 492