BLASTX nr result

ID: Sinomenium21_contig00035552 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00035552
         (567 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMT33750.1| Putative chromatin-remodeling complex ATPase chai...    66   7e-09
gb|EMT09624.1| Zinc finger protein 410 [Aegilops tauschii]             55   1e-05
gb|EMS53016.1| hypothetical protein TRIUR3_19797 [Triticum urartu]     55   1e-05

>gb|EMT33750.1| Putative chromatin-remodeling complex ATPase chain [Aegilops
           tauschii]
          Length = 950

 Score = 65.9 bits (159), Expect = 7e-09
 Identities = 34/58 (58%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
 Frame = +3

Query: 396 RGALAQR*ELSLCDLEVTGLSRGNSLLL-CKVRLRTIDPKWSNPSPGPRIRRSFVHQA 566
           +G+L    +L  CD EVTG S GNSLLL C+ RLRTIDPKWS+PSP P    S++H+A
Sbjct: 3   KGSLGAAVKLLPCDHEVTGSSPGNSLLLKCRERLRTIDPKWSDPSPDPCASGSYMHRA 60


>gb|EMT09624.1| Zinc finger protein 410 [Aegilops tauschii]
          Length = 1424

 Score = 55.5 bits (132), Expect = 1e-05
 Identities = 32/57 (56%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
 Frame = -3

Query: 535 GPGEGLDHFGSIVRNLTLH-SKRLFPRLKPVTSRSHSDNSYRCAKAP-LQFNVQTLN 371
           G GEG DHFGSIVR+L LH  KRLFP L+PVTS S  +N     + P +    QTLN
Sbjct: 63  GSGEGSDHFGSIVRSLPLHFCKRLFPGLEPVTSWSQGNNFTAAPRLPFINVAFQTLN 119


>gb|EMS53016.1| hypothetical protein TRIUR3_19797 [Triticum urartu]
          Length = 181

 Score = 55.5 bits (132), Expect = 1e-05
 Identities = 30/58 (51%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
 Frame = -3

Query: 562 WCTKLLRMRGPGEGLDHFGSIVRNLTLH-SKRLFPRLKPVTSRSHSDNSYRCAKAPLQ 392
           W    L  +      DHFGSIVR L+LH  KRLFP L+PVTS       YRCA+APL+
Sbjct: 88  WLESFLPAKTLTSRSDHFGSIVRTLSLHFCKRLFPGLEPVTSLVTRQQLYRCARAPLR 145


Top