BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00035428
         (528 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282614.1| PREDICTED: RNA pseudourine synthase 4, mitoc...   120   2e-25
gb|EXB63685.1| RNA pseudourine synthase 4 [Morus notabilis]           112   7e-23
ref|XP_006486999.1| PREDICTED: RNA pseudouridine synthase 4, mit...   112   7e-23
ref|XP_006422925.1| hypothetical protein CICLE_v10028283mg [Citr...   110   2e-22
ref|XP_006346360.1| PREDICTED: RNA pseudouridine synthase 4, mit...   108   6e-22
ref|XP_002313876.2| hypothetical protein POPTR_0009s09860g [Popu...   108   6e-22
ref|XP_007199810.1| hypothetical protein PRUPE_ppa004969mg [Prun...   108   8e-22
ref|XP_007199809.1| hypothetical protein PRUPE_ppa004969mg [Prun...   108   8e-22
ref|XP_004230733.1| PREDICTED: RNA pseudourine synthase 4, mitoc...   108   1e-21
ref|XP_004305959.1| PREDICTED: RNA pseudourine synthase 4, mitoc...   104   1e-20
ref|XP_002518674.1| ribosomal pseudouridine synthase, putative [...   103   2e-20
ref|XP_007042534.1| Ribosomal pseudouridine synthase, putative [...   100   2e-19
ref|XP_006847251.1| hypothetical protein AMTR_s00015p00025410 [A...    93   3e-17
ref|XP_004170490.1| PREDICTED: RNA pseudourine synthase 4, mitoc...    93   4e-17
ref|XP_004137095.1| PREDICTED: RNA pseudourine synthase 4, mitoc...    93   4e-17
gb|EMT04250.1| RNA pseudourine synthase 4, mitochondrial [Aegilo...    87   2e-15
gb|EMS51241.1| RNA pseudourine synthase 4, mitochondrial [Tritic...    87   2e-15
gb|EPS60113.1| hypothetical protein M569_14691, partial [Genlise...    86   7e-15
ref|XP_002459881.1| hypothetical protein SORBIDRAFT_02g012960 [S...    86   7e-15
ref|NP_001151637.1| LOC100285271 [Zea mays] gi|195648278|gb|ACG4...    86   7e-15

>ref|XP_002282614.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial [Vitis
           vinifera] gi|296090438|emb|CBI40257.3| unnamed protein
           product [Vitis vinifera]
          Length = 476

 Score =  120 bits (301), Expect = 2e-25
 Identities = 56/79 (70%), Positives = 69/79 (87%)
 Frame = -3

Query: 241 SAKDGMNVGDIICLPVTVQEFPSKKQECPCNEDEIKYIHSLEVYKDSAIIVVNKPPGMPV 62
           +AKD MN+GD I LP+TV+EFPS+K E  CN++EI ++H+LE+YKD AIIVVNKPPG+PV
Sbjct: 145 AAKDLMNLGDQILLPITVEEFPSEKHEYHCNDEEINFVHNLELYKDPAIIVVNKPPGLPV 204

Query: 61  QGGIGINKSLDLLAATYLR 5
           QGGIGI +SLD LAATYLR
Sbjct: 205 QGGIGIKRSLDELAATYLR 223


>gb|EXB63685.1| RNA pseudourine synthase 4 [Morus notabilis]
          Length = 470

 Score =  112 bits (279), Expect = 7e-23
 Identities = 52/78 (66%), Positives = 65/78 (83%)
 Frame = -3

Query: 241 SAKDGMNVGDIICLPVTVQEFPSKKQECPCNEDEIKYIHSLEVYKDSAIIVVNKPPGMPV 62
           SAKD +N+GD I LP++V+E P +K+EC CNE+E+K+I SLE+YKD AI+VVNKPPG+PV
Sbjct: 139 SAKDSLNLGDKIFLPISVKELPVEKKECFCNEEEVKFIRSLELYKDPAIVVVNKPPGLPV 198

Query: 61  QGGIGINKSLDLLAATYL 8
           QGGIGI  SLD LA T L
Sbjct: 199 QGGIGIKTSLDQLAVTCL 216


>ref|XP_006486999.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial-like isoform
           X1 [Citrus sinensis] gi|568867349|ref|XP_006487000.1|
           PREDICTED: RNA pseudouridine synthase 4,
           mitochondrial-like isoform X2 [Citrus sinensis]
          Length = 362

 Score =  112 bits (279), Expect = 7e-23
 Identities = 50/78 (64%), Positives = 67/78 (85%)
 Frame = -3

Query: 241 SAKDGMNVGDIICLPVTVQEFPSKKQECPCNEDEIKYIHSLEVYKDSAIIVVNKPPGMPV 62
           +AKD + +GD I LP+++QE PS+K++CPC E+E+++I SLE+YKDSAIIV+NKP GMPV
Sbjct: 31  AAKDSLKLGDRIFLPISIQESPSRKEKCPCTEEEVEFIQSLELYKDSAIIVINKPHGMPV 90

Query: 61  QGGIGINKSLDLLAATYL 8
           QGGIGI +S+D LAAT L
Sbjct: 91  QGGIGIRRSIDELAATCL 108


>ref|XP_006422925.1| hypothetical protein CICLE_v10028283mg [Citrus clementina]
           gi|557524859|gb|ESR36165.1| hypothetical protein
           CICLE_v10028283mg [Citrus clementina]
          Length = 494

 Score =  110 bits (276), Expect = 2e-22
 Identities = 50/78 (64%), Positives = 66/78 (84%)
 Frame = -3

Query: 241 SAKDGMNVGDIICLPVTVQEFPSKKQECPCNEDEIKYIHSLEVYKDSAIIVVNKPPGMPV 62
           +AKD + +GD I LP+++QE PS+K++CPC E+E+ +I SLE+YKDSAIIV+NKP GMPV
Sbjct: 163 AAKDSLKLGDRIFLPISIQESPSRKEKCPCTEEEVGFIQSLELYKDSAIIVINKPHGMPV 222

Query: 61  QGGIGINKSLDLLAATYL 8
           QGGIGI +S+D LAAT L
Sbjct: 223 QGGIGIRRSIDELAATCL 240


>ref|XP_006346360.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial-like
           [Solanum tuberosum]
          Length = 467

 Score =  108 bits (271), Expect = 6e-22
 Identities = 54/80 (67%), Positives = 66/80 (82%), Gaps = 1/80 (1%)
 Frame = -3

Query: 241 SAKDGMNVGDIICLPVTVQEFPSKKQEC-PCNEDEIKYIHSLEVYKDSAIIVVNKPPGMP 65
           SAK+ MNVGD I LP+TVQ+FPS+K    P +E+E K++HSLE+YKD  I+VVNKPPGMP
Sbjct: 135 SAKESMNVGDRIFLPITVQKFPSEKVVYYPSSEEERKFVHSLELYKDPEIVVVNKPPGMP 194

Query: 64  VQGGIGINKSLDLLAATYLR 5
           VQGGIGI +SLD LAA Y+R
Sbjct: 195 VQGGIGIKRSLDELAAKYMR 214


>ref|XP_002313876.2| hypothetical protein POPTR_0009s09860g [Populus trichocarpa]
           gi|550331407|gb|EEE87831.2| hypothetical protein
           POPTR_0009s09860g [Populus trichocarpa]
          Length = 471

 Score =  108 bits (271), Expect = 6e-22
 Identities = 50/76 (65%), Positives = 65/76 (85%)
 Frame = -3

Query: 241 SAKDGMNVGDIICLPVTVQEFPSKKQECPCNEDEIKYIHSLEVYKDSAIIVVNKPPGMPV 62
           +AKD M+VGD I LP++V+  P++KQ+C CNE+EI +I  LE+YKD+AIIVVNKPPGMPV
Sbjct: 141 AAKDSMDVGDRIFLPISVKVLPAEKQDCHCNEEEINFIRGLELYKDAAIIVVNKPPGMPV 200

Query: 61  QGGIGINKSLDLLAAT 14
           QGGIGI +SLD L+A+
Sbjct: 201 QGGIGIKRSLDELSAS 216


>ref|XP_007199810.1| hypothetical protein PRUPE_ppa004969mg [Prunus persica]
           gi|462395210|gb|EMJ01009.1| hypothetical protein
           PRUPE_ppa004969mg [Prunus persica]
          Length = 483

 Score =  108 bits (270), Expect = 8e-22
 Identities = 55/85 (64%), Positives = 66/85 (77%), Gaps = 7/85 (8%)
 Frame = -3

Query: 241 SAKDGMNVGDIICLPVTVQEFPSKKQECP-------CNEDEIKYIHSLEVYKDSAIIVVN 83
           +AKD MNVGD I LP++VQEFP+ KQE P       C+E+E+ +I SLE+YKD AIIV+N
Sbjct: 145 AAKDSMNVGDRIHLPLSVQEFPNDKQELPNDKKECYCSEEEVTFIRSLELYKDPAIIVIN 204

Query: 82  KPPGMPVQGGIGINKSLDLLAATYL 8
           KPPGMPVQGGIGI +SLD LAA  L
Sbjct: 205 KPPGMPVQGGIGIKRSLDELAAACL 229


>ref|XP_007199809.1| hypothetical protein PRUPE_ppa004969mg [Prunus persica]
           gi|462395209|gb|EMJ01008.1| hypothetical protein
           PRUPE_ppa004969mg [Prunus persica]
          Length = 481

 Score =  108 bits (270), Expect = 8e-22
 Identities = 55/85 (64%), Positives = 66/85 (77%), Gaps = 7/85 (8%)
 Frame = -3

Query: 241 SAKDGMNVGDIICLPVTVQEFPSKKQECP-------CNEDEIKYIHSLEVYKDSAIIVVN 83
           +AKD MNVGD I LP++VQEFP+ KQE P       C+E+E+ +I SLE+YKD AIIV+N
Sbjct: 145 AAKDSMNVGDRIHLPLSVQEFPNDKQELPNDKKECYCSEEEVTFIRSLELYKDPAIIVIN 204

Query: 82  KPPGMPVQGGIGINKSLDLLAATYL 8
           KPPGMPVQGGIGI +SLD LAA  L
Sbjct: 205 KPPGMPVQGGIGIKRSLDELAAACL 229


>ref|XP_004230733.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Solanum
           lycopersicum]
          Length = 467

 Score =  108 bits (269), Expect = 1e-21
 Identities = 54/79 (68%), Positives = 66/79 (83%), Gaps = 1/79 (1%)
 Frame = -3

Query: 241 SAKDGMNVGDIICLPVTVQEFPSKKQEC-PCNEDEIKYIHSLEVYKDSAIIVVNKPPGMP 65
           SAK+ MNVGD I LP+TVQ+FPS+K    P +E+E K++HSLE+YKD+ IIVVNKPPGMP
Sbjct: 135 SAKESMNVGDRIFLPITVQKFPSEKVVYYPSSEEERKFVHSLELYKDAEIIVVNKPPGMP 194

Query: 64  VQGGIGINKSLDLLAATYL 8
           VQGGIGI +SLD LAA Y+
Sbjct: 195 VQGGIGIKRSLDELAAKYM 213


>ref|XP_004305959.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Fragaria
           vesca subsp. vesca]
          Length = 476

 Score =  104 bits (259), Expect = 1e-20
 Identities = 51/77 (66%), Positives = 63/77 (81%), Gaps = 1/77 (1%)
 Frame = -3

Query: 235 KDGMNVGDIICLPVTVQEFPSKKQ-ECPCNEDEIKYIHSLEVYKDSAIIVVNKPPGMPVQ 59
           KD MN+GD ICLP++V+EFP  KQ E  C+E+E ++I SL +YKD AIIV+NKPPG+PVQ
Sbjct: 136 KDSMNLGDRICLPISVKEFPDHKQKEGHCSEEEAEFIRSLVLYKDPAIIVINKPPGLPVQ 195

Query: 58  GGIGINKSLDLLAATYL 8
           GGIGI +SLD LAAT L
Sbjct: 196 GGIGIKRSLDELAATCL 212


>ref|XP_002518674.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
           gi|223542055|gb|EEF43599.1| ribosomal pseudouridine
           synthase, putative [Ricinus communis]
          Length = 536

 Score =  103 bits (257), Expect = 2e-20
 Identities = 51/78 (65%), Positives = 59/78 (75%)
 Frame = -3

Query: 241 SAKDGMNVGDIICLPVTVQEFPSKKQECPCNEDEIKYIHSLEVYKDSAIIVVNKPPGMPV 62
           +AKD MNVGD I LP++VQ  P +KQ+C C E E  +I  LE+YKD AIIVVNKPPGMPV
Sbjct: 206 AAKDLMNVGDRIFLPISVQALPFEKQKCHCGEKEANFIRGLELYKDEAIIVVNKPPGMPV 265

Query: 61  QGGIGINKSLDLLAATYL 8
           QGGIGI  S D LAA+ L
Sbjct: 266 QGGIGIKSSFDELAASCL 283


>ref|XP_007042534.1| Ribosomal pseudouridine synthase, putative [Theobroma cacao]
           gi|508706469|gb|EOX98365.1| Ribosomal pseudouridine
           synthase, putative [Theobroma cacao]
          Length = 477

 Score =  100 bits (250), Expect = 2e-19
 Identities = 49/77 (63%), Positives = 59/77 (76%)
 Frame = -3

Query: 238 AKDGMNVGDIICLPVTVQEFPSKKQECPCNEDEIKYIHSLEVYKDSAIIVVNKPPGMPVQ 59
           AKD +N+GD I LP +V+EF  +KQE  C E+E+ +I  LE+YKD AIIV+NKPPGMPVQ
Sbjct: 147 AKDALNIGDRIFLPFSVREFREEKQESGCTEEELNFIRGLELYKDPAIIVLNKPPGMPVQ 206

Query: 58  GGIGINKSLDLLAATYL 8
           GGIGI  SLD LAA  L
Sbjct: 207 GGIGIKWSLDKLAAACL 223


>ref|XP_006847251.1| hypothetical protein AMTR_s00015p00025410 [Amborella trichopoda]
           gi|548850328|gb|ERN08832.1| hypothetical protein
           AMTR_s00015p00025410 [Amborella trichopoda]
          Length = 457

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 44/78 (56%), Positives = 59/78 (75%)
 Frame = -3

Query: 238 AKDGMNVGDIICLPVTVQEFPSKKQECPCNEDEIKYIHSLEVYKDSAIIVVNKPPGMPVQ 59
           AKD +N GD I LP+TV      + +  CN++E++YI SLEVYKD+AI+VVNKPPG+PVQ
Sbjct: 129 AKDTLNSGDRIFLPITVNPAVEVEDDYICNKEEMEYIRSLEVYKDAAIVVVNKPPGLPVQ 188

Query: 58  GGIGINKSLDLLAATYLR 5
           GG G+  SLD+L A+ L+
Sbjct: 189 GGTGVKLSLDVLVASSLK 206


>ref|XP_004170490.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Cucumis
           sativus]
          Length = 471

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 44/78 (56%), Positives = 62/78 (79%)
 Frame = -3

Query: 241 SAKDGMNVGDIICLPVTVQEFPSKKQECPCNEDEIKYIHSLEVYKDSAIIVVNKPPGMPV 62
           +AKD +NVGD I LP++VQ F ++K    CN++E  ++HSL ++KD AI+V+NKPPG+PV
Sbjct: 146 AAKDILNVGDQIFLPMSVQVFSTEKTRDYCNKEEETFMHSLVLHKDPAILVINKPPGLPV 205

Query: 61  QGGIGINKSLDLLAATYL 8
           QGGIG+ +SLD LAA+ L
Sbjct: 206 QGGIGVKRSLDELAASCL 223


>ref|XP_004137095.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Cucumis
           sativus]
          Length = 466

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 44/78 (56%), Positives = 62/78 (79%)
 Frame = -3

Query: 241 SAKDGMNVGDIICLPVTVQEFPSKKQECPCNEDEIKYIHSLEVYKDSAIIVVNKPPGMPV 62
           +AKD +NVGD I LP++VQ F ++K    CN++E  ++HSL ++KD AI+V+NKPPG+PV
Sbjct: 141 AAKDILNVGDQIFLPMSVQVFSTEKTRDYCNKEEETFMHSLVLHKDPAILVINKPPGLPV 200

Query: 61  QGGIGINKSLDLLAATYL 8
           QGGIG+ +SLD LAA+ L
Sbjct: 201 QGGIGVKRSLDELAASCL 218


>gb|EMT04250.1| RNA pseudourine synthase 4, mitochondrial [Aegilops tauschii]
          Length = 468

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 44/78 (56%), Positives = 57/78 (73%), Gaps = 1/78 (1%)
 Frame = -3

Query: 241 SAKDGMNVGDIICLPVTVQEFP-SKKQECPCNEDEIKYIHSLEVYKDSAIIVVNKPPGMP 65
           SAKD +  GD + LPV +QE P ++K     N +EI ++ SLE+YKD AIIVVNKPPGMP
Sbjct: 139 SAKDHLVPGDTLFLPVNIQESPVAEKARKFDNRNEIDFLRSLEIYKDKAIIVVNKPPGMP 198

Query: 64  VQGGIGINKSLDLLAATY 11
           VQGG+GI  S+D+LA  +
Sbjct: 199 VQGGVGIKNSIDVLAPMF 216


>gb|EMS51241.1| RNA pseudourine synthase 4, mitochondrial [Triticum urartu]
          Length = 468

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 44/78 (56%), Positives = 57/78 (73%), Gaps = 1/78 (1%)
 Frame = -3

Query: 241 SAKDGMNVGDIICLPVTVQEFP-SKKQECPCNEDEIKYIHSLEVYKDSAIIVVNKPPGMP 65
           SAKD +  GD + LPV +QE P ++K     N +EI ++ SLE+YKD AIIVVNKPPGMP
Sbjct: 139 SAKDHLVPGDTLFLPVNIQESPVAEKARKFDNRNEIDFLRSLEIYKDKAIIVVNKPPGMP 198

Query: 64  VQGGIGINKSLDLLAATY 11
           VQGG+GI  S+D+LA  +
Sbjct: 199 VQGGVGIKNSIDVLAPMF 216


>gb|EPS60113.1| hypothetical protein M569_14691, partial [Genlisea aurea]
          Length = 165

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 47/82 (57%), Positives = 56/82 (68%), Gaps = 4/82 (4%)
 Frame = -3

Query: 238 AKDGMNVGDIICLPVTVQEFPSKKQECPCN----EDEIKYIHSLEVYKDSAIIVVNKPPG 71
           A D M VGDII LP +V    S       N    E+E +++ SLE+YKDSAIIVVNKPPG
Sbjct: 74  ATDLMEVGDIIFLPKSVDGEASSPTSSNKNGLFDEEESRFVRSLELYKDSAIIVVNKPPG 133

Query: 70  MPVQGGIGINKSLDLLAATYLR 5
           +PVQGG+GI  SLD LAA YL+
Sbjct: 134 LPVQGGVGIKSSLDELAAKYLK 155


>ref|XP_002459881.1| hypothetical protein SORBIDRAFT_02g012960 [Sorghum bicolor]
           gi|241923258|gb|EER96402.1| hypothetical protein
           SORBIDRAFT_02g012960 [Sorghum bicolor]
          Length = 246

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 42/80 (52%), Positives = 58/80 (72%)
 Frame = -3

Query: 241 SAKDGMNVGDIICLPVTVQEFPSKKQECPCNEDEIKYIHSLEVYKDSAIIVVNKPPGMPV 62
           SAKD +  GDI+ LP  +QE    +++   N++EI ++ SLE+YKD AIIV+NKPPGMPV
Sbjct: 142 SAKDELVPGDILFLPDNIQESSVTEKKKFGNKNEIDFLRSLEIYKDRAIIVLNKPPGMPV 201

Query: 61  QGGIGINKSLDLLAATYLRG 2
           QGG+GI  S+D+LA  +  G
Sbjct: 202 QGGVGIKNSIDILAPMFEDG 221


>ref|NP_001151637.1| LOC100285271 [Zea mays] gi|195648278|gb|ACG43607.1| RNA binding
           protein [Zea mays]
          Length = 439

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 43/81 (53%), Positives = 59/81 (72%), Gaps = 1/81 (1%)
 Frame = -3

Query: 241 SAKDGMNVGDIICLPVTVQEFP-SKKQECPCNEDEIKYIHSLEVYKDSAIIVVNKPPGMP 65
           SAKD +  GDI+ LPV +QE   ++K +   N++EI ++  LE+YKD AIIV+NKPPGMP
Sbjct: 133 SAKDELVPGDILFLPVNIQESSVTEKTKKFGNKNEIDFLRDLEIYKDRAIIVLNKPPGMP 192

Query: 64  VQGGIGINKSLDLLAATYLRG 2
           VQGG+GI  S+D+LA  +  G
Sbjct: 193 VQGGVGIKNSIDILAPMFENG 213