BLASTX nr result
ID: Sinomenium21_contig00035242
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00035242
(525 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXB56945.1| hypothetical protein L484_019990 [Morus notabilis] 132 2e-38
ref|XP_003633738.1| PREDICTED: pentatricopeptide repeat-containi... 130 2e-37
emb|CAN82481.1| hypothetical protein VITISV_012747 [Vitis vinifera] 128 7e-37
ref|XP_002305195.1| pentatricopeptide repeat-containing family p... 128 1e-36
ref|XP_006430611.1| hypothetical protein CICLE_v10011485mg [Citr... 124 1e-36
ref|XP_007214531.1| hypothetical protein PRUPE_ppa014874mg, part... 124 5e-36
ref|XP_004301459.1| PREDICTED: pentatricopeptide repeat-containi... 117 8e-36
ref|XP_006482125.1| PREDICTED: pentatricopeptide repeat-containi... 120 3e-35
ref|XP_002531188.1| pentatricopeptide repeat-containing protein,... 117 7e-35
ref|XP_004240257.1| PREDICTED: pentatricopeptide repeat-containi... 102 5e-34
ref|XP_004171986.1| PREDICTED: pentatricopeptide repeat-containi... 116 8e-33
ref|XP_004140361.1| PREDICTED: pentatricopeptide repeat-containi... 116 8e-33
gb|EYU26093.1| hypothetical protein MIMGU_mgv1a027076mg [Mimulus... 107 6e-29
ref|XP_004486552.1| PREDICTED: pentatricopeptide repeat-containi... 97 3e-27
ref|XP_006391386.1| hypothetical protein EUTSA_v10018418mg [Eutr... 103 4e-26
ref|XP_002887023.1| pentatricopeptide repeat-containing protein ... 107 8e-26
ref|NP_849849.1| pentatricopeptide repeat-containing protein [Ar... 100 4e-25
ref|XP_007022700.1| Pentatricopeptide repeat superfamily protein... 99 5e-25
ref|XP_007022703.1| Pentatricopeptide repeat (PPR) superfamily p... 99 5e-25
ref|XP_007022702.1| Pentatricopeptide repeat (PPR) superfamily p... 99 5e-25
>gb|EXB56945.1| hypothetical protein L484_019990 [Morus notabilis]
Length = 829
Score = 132 bits (333), Expect(2) = 2e-38
Identities = 64/105 (60%), Positives = 86/105 (81%), Gaps = 4/105 (3%)
Frame = +2
Query: 221 KHGIRSYCITIHILVRARLIIDARALLESVIRSSSG----LIVLELLLSTYKNTFSSPFV 388
+H +RSYC+ IHILVRARL +DARAL+E+V++ ++G +V++ LLS YK T S+PFV
Sbjct: 274 QHCLRSYCLAIHILVRARLNLDARALIETVLKKNAGDSSKFLVVDSLLSCYKITDSTPFV 333
Query: 389 FDLLIQTYSKLRIFDTAFDACRCLEEHGFSCSLISFNTLIHVVQK 523
FDLL+Q+YS+LR+FD+ FD C LEEHGFS +L+SFNT IHVV+K
Sbjct: 334 FDLLVQSYSRLRMFDSGFDVCCYLEEHGFSLNLVSFNTFIHVVEK 378
Score = 52.4 bits (124), Expect(2) = 2e-38
Identities = 22/38 (57%), Positives = 29/38 (76%)
Frame = +3
Query: 108 LEQELSFNQVNRSIVEKVLLELKEPIDAKQALGFFHWS 221
L +E + N ++EK+LLELK+PIDAK ALGFFHW+
Sbjct: 230 LSREFHHIEFNEQLIEKILLELKQPIDAKWALGFFHWA 267
>ref|XP_003633738.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
mitochondrial-like [Vitis vinifera]
Length = 547
Score = 130 bits (327), Expect(2) = 2e-37
Identities = 64/104 (61%), Positives = 86/104 (82%), Gaps = 2/104 (1%)
Frame = +2
Query: 218 VKHGIRSYCITIHILVRARLIIDARALLESVIRSSSG--LIVLELLLSTYKNTFSSPFVF 391
++HG+ SYCITIHILV A+L++DA++LLES ++ ++G +V++ LLS+Y T S+P VF
Sbjct: 100 LEHGLASYCITIHILVGAQLLMDAQSLLESTLKKNAGSRFLVVDSLLSSYNITGSNPRVF 159
Query: 392 DLLIQTYSKLRIFDTAFDACRCLEEHGFSCSLISFNTLIHVVQK 523
DLL+Q+YSKLR+F+ FD C LEEHGFS SLISFNTL+HVVQK
Sbjct: 160 DLLVQSYSKLRMFEICFDVCCYLEEHGFSLSLISFNTLLHVVQK 203
Score = 51.6 bits (122), Expect(2) = 2e-37
Identities = 24/38 (63%), Positives = 28/38 (73%)
Frame = +3
Query: 108 LEQELSFNQVNRSIVEKVLLELKEPIDAKQALGFFHWS 221
L Q ++ S V +VLLELK+PIDAKQALGFFHWS
Sbjct: 57 LNQRFGSLELTESFVGRVLLELKKPIDAKQALGFFHWS 94
>emb|CAN82481.1| hypothetical protein VITISV_012747 [Vitis vinifera]
Length = 642
Score = 128 bits (321), Expect(2) = 7e-37
Identities = 63/104 (60%), Positives = 84/104 (80%), Gaps = 2/104 (1%)
Frame = +2
Query: 218 VKHGIRSYCITIHILVRARLIIDARALLESVIRSSSG--LIVLELLLSTYKNTFSSPFVF 391
++HG+ SYCITIHILV A L++DA++LLES ++ ++G +V++ LLS+Y T S+P VF
Sbjct: 100 LEHGVASYCITIHILVGAHLLMDAQSLLESTLKKNAGSRFLVVDSLLSSYNITGSNPRVF 159
Query: 392 DLLIQTYSKLRIFDTAFDACRCLEEHGFSCSLISFNTLIHVVQK 523
DLL+Q+YSKLR+F+ FD C LEEHGFS SLISFN L+HVVQK
Sbjct: 160 DLLVQSYSKLRMFEICFDVCCYLEEHGFSLSLISFNXLLHVVQK 203
Score = 51.6 bits (122), Expect(2) = 7e-37
Identities = 24/38 (63%), Positives = 28/38 (73%)
Frame = +3
Query: 108 LEQELSFNQVNRSIVEKVLLELKEPIDAKQALGFFHWS 221
L Q ++ S V +VLLELK+PIDAKQALGFFHWS
Sbjct: 57 LNQRFGSLELTESFVGRVLLELKKPIDAKQALGFFHWS 94
>ref|XP_002305195.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222848159|gb|EEE85706.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 556
Score = 128 bits (321), Expect(2) = 1e-36
Identities = 64/104 (61%), Positives = 82/104 (78%), Gaps = 4/104 (3%)
Frame = +2
Query: 224 HGIRSYCITIHILVRARLIIDARALLESVIRSSSG----LIVLELLLSTYKNTFSSPFVF 391
HG++SYC+ IHIL++ARLI+DA+ALLES+++ S G +VL+ LLS+YK SSP VF
Sbjct: 107 HGVQSYCLMIHILIQARLIMDAQALLESLLKKSVGDPTKFLVLDSLLSSYKIIISSPLVF 166
Query: 392 DLLIQTYSKLRIFDTAFDACRCLEEHGFSCSLISFNTLIHVVQK 523
DLL+Q Y+K R+F+ FD C LEEH F+ SLISFNTLIHVVQK
Sbjct: 167 DLLVQAYAKQRMFEIGFDVCCRLEEHRFTLSLISFNTLIHVVQK 210
Score = 50.8 bits (120), Expect(2) = 1e-36
Identities = 23/38 (60%), Positives = 29/38 (76%)
Frame = +3
Query: 108 LEQELSFNQVNRSIVEKVLLELKEPIDAKQALGFFHWS 221
L ++ Q+N +V+ VLLELKEP DAK+ALGFFHWS
Sbjct: 63 LNRKFESLQLNNLLVKNVLLELKEPTDAKRALGFFHWS 100
>ref|XP_006430611.1| hypothetical protein CICLE_v10011485mg [Citrus clementina]
gi|557532668|gb|ESR43851.1| hypothetical protein
CICLE_v10011485mg [Citrus clementina]
Length = 521
Score = 124 bits (312), Expect(2) = 1e-36
Identities = 64/105 (60%), Positives = 78/105 (74%), Gaps = 4/105 (3%)
Frame = +2
Query: 221 KHGIRSYCITIHILVRARLIIDARALLESVIRSSSG----LIVLELLLSTYKNTFSSPFV 388
+H + SY +TIHILVRARL++DARAL+ESV+ G V++ LL TY S P V
Sbjct: 100 QHNLCSYSVTIHILVRARLLVDARALIESVLEKHIGDDSRFSVVDSLLDTYNVADSIPLV 159
Query: 389 FDLLIQTYSKLRIFDTAFDACRCLEEHGFSCSLISFNTLIHVVQK 523
FDLL+QTYSK+R+F+ AFD CR LE+ GFS SLISFNTLIHVV K
Sbjct: 160 FDLLVQTYSKMRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTK 204
Score = 54.3 bits (129), Expect(2) = 1e-36
Identities = 24/38 (63%), Positives = 31/38 (81%)
Frame = +3
Query: 108 LEQELSFNQVNRSIVEKVLLELKEPIDAKQALGFFHWS 221
L ++ + +N S+VE VLLELKEP+DAK+ALGFFHWS
Sbjct: 56 LSKQFNSIHLNDSLVENVLLELKEPVDAKRALGFFHWS 93
>ref|XP_007214531.1| hypothetical protein PRUPE_ppa014874mg, partial [Prunus persica]
gi|462410396|gb|EMJ15730.1| hypothetical protein
PRUPE_ppa014874mg, partial [Prunus persica]
Length = 499
Score = 124 bits (310), Expect(3) = 5e-36
Identities = 63/105 (60%), Positives = 82/105 (78%), Gaps = 4/105 (3%)
Frame = +2
Query: 221 KHGIRSYCITIHILVRARLIIDARALLESVIRSS----SGLIVLELLLSTYKNTFSSPFV 388
+HG+ SY ITIHIL RARL++DARALLESV++ + S V++ LLS+Y+ T S+PFV
Sbjct: 94 EHGVWSYSITIHILARARLLMDARALLESVLKKTAENGSKFSVVDSLLSSYEVTASNPFV 153
Query: 389 FDLLIQTYSKLRIFDTAFDACRCLEEHGFSCSLISFNTLIHVVQK 523
FDLL+Q Y+KLR+F+T FD C L EHG SLI++NTL+HVVQK
Sbjct: 154 FDLLLQAYAKLRMFETGFDVCCYLGEHGLPLSLITYNTLLHVVQK 198
Score = 48.1 bits (113), Expect(3) = 5e-36
Identities = 20/30 (66%), Positives = 27/30 (90%)
Frame = +3
Query: 132 QVNRSIVEKVLLELKEPIDAKQALGFFHWS 221
+++ +V+ VLLELKEPIDAK+ALGFFHW+
Sbjct: 58 KLDGGLVDSVLLELKEPIDAKRALGFFHWA 87
Score = 25.4 bits (54), Expect(3) = 5e-36
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +1
Query: 76 DLLRRGENWDILSKSFHSIKLTAPL 150
D R NWD L+ F S+KL L
Sbjct: 39 DSFRSSWNWDTLTTKFESVKLDGGL 63
>ref|XP_004301459.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 530
Score = 117 bits (292), Expect(3) = 8e-36
Identities = 58/104 (55%), Positives = 80/104 (76%), Gaps = 4/104 (3%)
Frame = +2
Query: 224 HGIRSYCITIHILVRARLIIDARALLESVIRSSSG----LIVLELLLSTYKNTFSSPFVF 391
HG+ SY ITIHILVRA++ +DARAL+ESV++ + G V++ LLS+Y+ T S+PFVF
Sbjct: 93 HGVWSYSITIHILVRAKMAMDARALMESVLKKNVGDSLKFSVVDSLLSSYEVTASNPFVF 152
Query: 392 DLLIQTYSKLRIFDTAFDACRCLEEHGFSCSLISFNTLIHVVQK 523
DLL+QTY+K+R+F+T FD C L E G SLIS+NTL+ VV++
Sbjct: 153 DLLVQTYAKMRMFETGFDVCCYLRERGLPLSLISYNTLLRVVER 196
Score = 45.4 bits (106), Expect(3) = 8e-36
Identities = 19/29 (65%), Positives = 25/29 (86%)
Frame = +3
Query: 132 QVNRSIVEKVLLELKEPIDAKQALGFFHW 218
+++ +VE VLLELK+P DAK+ALGFFHW
Sbjct: 56 KLDAKLVENVLLELKDPNDAKRALGFFHW 84
Score = 34.3 bits (77), Expect(3) = 8e-36
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +1
Query: 19 IHTTSTEEPKHNAIIALACDLLRRGENWDILSKSFHSIKLTAPL 150
IHT ST N ++ CD + G +WD L+ F +KL A L
Sbjct: 22 IHTNSTP----NNVVRAICDSFKSGWSWDALTSKFACVKLDAKL 61
>ref|XP_006482125.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
mitochondrial-like isoform X1 [Citrus sinensis]
Length = 553
Score = 120 bits (300), Expect(2) = 3e-35
Identities = 62/105 (59%), Positives = 77/105 (73%), Gaps = 4/105 (3%)
Frame = +2
Query: 221 KHGIRSYCITIHILVRARLIIDARALLESVIRSSSG----LIVLELLLSTYKNTFSSPFV 388
+H + SY +TIHILV+ARL++DARAL+ESV+ G V++ LL TY S P V
Sbjct: 100 QHNLCSYSVTIHILVQARLLVDARALIESVLEKHIGDDSRFSVVDSLLDTYNVADSIPLV 159
Query: 389 FDLLIQTYSKLRIFDTAFDACRCLEEHGFSCSLISFNTLIHVVQK 523
FDLL+QTYSK+R+F+ AFD C LE+ GFS SLISFNTLIHVV K
Sbjct: 160 FDLLVQTYSKMRLFEVAFDVCCYLEQRGFSLSLISFNTLIHVVTK 204
Score = 54.3 bits (129), Expect(2) = 3e-35
Identities = 24/38 (63%), Positives = 31/38 (81%)
Frame = +3
Query: 108 LEQELSFNQVNRSIVEKVLLELKEPIDAKQALGFFHWS 221
L ++ + +N S+VE VLLELKEP+DAK+ALGFFHWS
Sbjct: 56 LSKQFNSIHLNDSLVENVLLELKEPVDAKRALGFFHWS 93
>ref|XP_002531188.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223529229|gb|EEF31203.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 619
Score = 117 bits (293), Expect(2) = 7e-35
Identities = 58/104 (55%), Positives = 79/104 (75%), Gaps = 4/104 (3%)
Frame = +2
Query: 224 HGIRSYCITIHILVRARLIIDARALLESVIRS----SSGLIVLELLLSTYKNTFSSPFVF 391
HG+ SYC+ ++ILVRA+L+ DA+ALLES+++ SS ++++ LL +YK SSP VF
Sbjct: 108 HGVWSYCLMVNILVRAQLLNDAQALLESILKKNVEDSSEFLIVDSLLDSYKIIVSSPLVF 167
Query: 392 DLLIQTYSKLRIFDTAFDACRCLEEHGFSCSLISFNTLIHVVQK 523
+LL+Q Y+KLR+F+ F C LEEHGF SL+SFNTLIHVVQK
Sbjct: 168 NLLVQAYAKLRLFEIGFKICFYLEEHGFFLSLLSFNTLIHVVQK 211
Score = 55.8 bits (133), Expect(2) = 7e-35
Identities = 25/38 (65%), Positives = 31/38 (81%)
Frame = +3
Query: 108 LEQELSFNQVNRSIVEKVLLELKEPIDAKQALGFFHWS 221
L + + ++N +VEKVLLELKEPIDAK+ALGFFHWS
Sbjct: 63 LSGKFQYVELNHLLVEKVLLELKEPIDAKRALGFFHWS 100
>ref|XP_004240257.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
mitochondrial-like [Solanum lycopersicum]
Length = 552
Score = 102 bits (254), Expect(3) = 5e-34
Identities = 52/106 (49%), Positives = 71/106 (66%), Gaps = 5/106 (4%)
Frame = +2
Query: 221 KHGIRSYCITIHILVRARLIIDARALLESVIRSSSGL-----IVLELLLSTYKNTFSSPF 385
+HG+ YCI IHIL +++L+ A AL+ESV+R SG+ VL L+ +YK S F
Sbjct: 110 RHGVFIYCIIIHILAKSKLVRHANALIESVLRKESGVDGHVFSVLACLIGSYKLADSCSF 169
Query: 386 VFDLLIQTYSKLRIFDTAFDACRCLEEHGFSCSLISFNTLIHVVQK 523
VFDL +Q +KLR+ D D C+ L+ +GF SLIS+NTL+HVVQK
Sbjct: 170 VFDLFVQCCAKLRMIDKGLDVCKLLDGNGFMLSLISYNTLLHVVQK 215
Score = 44.7 bits (104), Expect(3) = 5e-34
Identities = 20/29 (68%), Positives = 23/29 (79%)
Frame = +3
Query: 147 IVEKVLLELKEPIDAKQALGFFHWSNMEF 233
IV++VLL+LKEP DAK AL FFHWS F
Sbjct: 79 IVQEVLLQLKEPHDAKNALSFFHWSAKSF 107
Score = 43.5 bits (101), Expect(3) = 5e-34
Identities = 19/51 (37%), Positives = 28/51 (54%)
Frame = +1
Query: 16 SIHTTSTEEPKHNAIIALACDLLRRGENWDILSKSFHSIKLTAPLSRKYCL 168
S+ +N+II C+ LRRGENW +L+K F S T P+ ++ L
Sbjct: 35 SLQALQNSPNSNNSIITSMCNSLRRGENWQVLTKKFQSFHFTDPIVQEVLL 85
>ref|XP_004171986.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
mitochondrial-like [Cucumis sativus]
Length = 539
Score = 116 bits (290), Expect(2) = 8e-33
Identities = 61/104 (58%), Positives = 79/104 (75%), Gaps = 4/104 (3%)
Frame = +2
Query: 224 HGIRSYCITIHILVRARLIIDARALLESVIRSSSG----LIVLELLLSTYKNTFSSPFVF 391
HG +S+ I IHILV+ARL++DARALLES+++ + G V++ L+ +Y+ T SSPFVF
Sbjct: 103 HGPQSFGIMIHILVKARLVLDARALLESILKKNEGNSFDYSVVDSLMDSYEVTGSSPFVF 162
Query: 392 DLLIQTYSKLRIFDTAFDACRCLEEHGFSCSLISFNTLIHVVQK 523
DLL+QT +KLR+ D A C LEE GFS SLISFNTLIHVV+K
Sbjct: 163 DLLVQTCAKLRLIDFALCVCSHLEERGFSLSLISFNTLIHVVEK 206
Score = 50.1 bits (118), Expect(2) = 8e-33
Identities = 20/38 (52%), Positives = 31/38 (81%)
Frame = +3
Query: 108 LEQELSFNQVNRSIVEKVLLELKEPIDAKQALGFFHWS 221
L ++ F ++N +V+KVLL+ ++P+DAK+ALGFFHWS
Sbjct: 58 LSRKFQFLELNDFLVQKVLLKFQQPVDAKRALGFFHWS 95
>ref|XP_004140361.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
mitochondrial-like [Cucumis sativus]
Length = 517
Score = 116 bits (290), Expect(2) = 8e-33
Identities = 61/104 (58%), Positives = 79/104 (75%), Gaps = 4/104 (3%)
Frame = +2
Query: 224 HGIRSYCITIHILVRARLIIDARALLESVIRSSSG----LIVLELLLSTYKNTFSSPFVF 391
HG +S+ I IHILV+ARL++DARALLES+++ + G V++ L+ +Y+ T SSPFVF
Sbjct: 81 HGPQSFGIMIHILVKARLVLDARALLESILKKNEGNSFDYSVVDSLMDSYEVTGSSPFVF 140
Query: 392 DLLIQTYSKLRIFDTAFDACRCLEEHGFSCSLISFNTLIHVVQK 523
DLL+QT +KLR+ D A C LEE GFS SLISFNTLIHVV+K
Sbjct: 141 DLLVQTCAKLRLIDFALCVCSHLEERGFSLSLISFNTLIHVVEK 184
Score = 50.1 bits (118), Expect(2) = 8e-33
Identities = 20/38 (52%), Positives = 31/38 (81%)
Frame = +3
Query: 108 LEQELSFNQVNRSIVEKVLLELKEPIDAKQALGFFHWS 221
L ++ F ++N +V+KVLL+ ++P+DAK+ALGFFHWS
Sbjct: 36 LSRKFQFLELNDFLVQKVLLKFQQPVDAKRALGFFHWS 73
>gb|EYU26093.1| hypothetical protein MIMGU_mgv1a027076mg [Mimulus guttatus]
Length = 541
Score = 107 bits (267), Expect(2) = 6e-29
Identities = 57/107 (53%), Positives = 74/107 (69%), Gaps = 6/107 (5%)
Frame = +2
Query: 221 KHGIRSYCITIHILVRARLIIDARALLESVI------RSSSGLIVLELLLSTYKNTFSSP 382
+HG+ +YC+TIHILV+ARLI DA+AL+ESV+ S L VLE L+ +Y S P
Sbjct: 100 EHGLSTYCLTIHILVKARLIKDAKALIESVLIKDFSDGDSRMLDVLESLIDSYAIVESVP 159
Query: 383 FVFDLLIQTYSKLRIFDTAFDACRCLEEHGFSCSLISFNTLIHVVQK 523
FVFDL IQT +KLR+ D DAC+ L H F S+ISFNT++HV+ K
Sbjct: 160 FVFDLFIQTCAKLRMVDDILDACKLLSRHDFPLSVISFNTILHVMIK 206
Score = 45.8 bits (107), Expect(2) = 6e-29
Identities = 23/63 (36%), Positives = 36/63 (57%)
Frame = +3
Query: 42 TEAQRDYRSRL*FVKER*ELGYLEQELSFNQVNRSIVEKVLLELKEPIDAKQALGFFHWS 221
T + S + + ER L ++ S + IV+ +LL+LKEPI++++AL FFHWS
Sbjct: 34 TSSSSSITSLIDSLHERRSWKTLSEKFSSLKFTNQIVQNILLQLKEPINSRKALNFFHWS 93
Query: 222 NME 230
E
Sbjct: 94 RKE 96
>ref|XP_004486552.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
mitochondrial-like [Cicer arietinum]
gi|502183720|ref|XP_004517198.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g66345,
mitochondrial-like [Cicer arietinum]
Length = 551
Score = 97.4 bits (241), Expect(2) = 3e-27
Identities = 50/106 (47%), Positives = 70/106 (66%), Gaps = 5/106 (4%)
Frame = +2
Query: 221 KHGIRSYCITIHILVRARLIIDARALLESVIRSSSGLIVLELLLSTYKNTFSSPF----- 385
+HG+RSY ITIH+L++A LI DA ALLES++ + + ++ ++ NT S
Sbjct: 98 QHGLRSYSITIHLLLQAGLITDANALLESLVNKHTKTHTVRAIIDSFINTSESVSGSHLP 157
Query: 386 VFDLLIQTYSKLRIFDTAFDACRCLEEHGFSCSLISFNTLIHVVQK 523
VFDLL++ Y+K R+ D AF CRC+EE GF SL SFN L++V QK
Sbjct: 158 VFDLLVKAYAKARLTDVAFAVCRCVEECGFCVSLSSFNALLYVAQK 203
Score = 50.1 bits (118), Expect(2) = 3e-27
Identities = 23/39 (58%), Positives = 29/39 (74%)
Frame = +3
Query: 108 LEQELSFNQVNRSIVEKVLLELKEPIDAKQALGFFHWSN 224
L + S ++N S+VE+VLLELK P DAK AL FFHWS+
Sbjct: 54 LTHKFSSIKLNHSLVEQVLLELKHPTDAKNALSFFHWSS 92
>ref|XP_006391386.1| hypothetical protein EUTSA_v10018418mg [Eutrema salsugineum]
gi|557087820|gb|ESQ28672.1| hypothetical protein
EUTSA_v10018418mg [Eutrema salsugineum]
Length = 511
Score = 103 bits (258), Expect(2) = 4e-26
Identities = 53/103 (51%), Positives = 74/103 (71%), Gaps = 1/103 (0%)
Frame = +2
Query: 218 VKHGIRSYCITIHILVRARLIIDARALLES-VIRSSSGLIVLELLLSTYKNTFSSPFVFD 394
++HG SY + IHILVRARL++DARAL+ES ++ S S +L+ LLSTY + S+P VFD
Sbjct: 102 LRHGTSSYAVAIHILVRARLLVDARALIESSLLNSDSDSDLLDSLLSTYDVSCSTPLVFD 161
Query: 395 LLIQTYSKLRIFDTAFDACRCLEEHGFSCSLISFNTLIHVVQK 523
LL+Q Y+KLR+ ++ FD L + GFS S+I+ NTL+H K
Sbjct: 162 LLVQGYAKLRLLESGFDVFHRLCDRGFSLSVITLNTLLHFAAK 204
Score = 39.7 bits (91), Expect(2) = 4e-26
Identities = 18/38 (47%), Positives = 25/38 (65%)
Frame = +3
Query: 108 LEQELSFNQVNRSIVEKVLLELKEPIDAKQALGFFHWS 221
L + S + S+V+K+LL K+P AK+AL FFHWS
Sbjct: 59 LSNKYSSIDFSDSLVKKILLRFKQPETAKRALSFFHWS 96
>ref|XP_002887023.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297332864|gb|EFH63282.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 539
Score = 107 bits (266), Expect(2) = 8e-26
Identities = 55/102 (53%), Positives = 76/102 (74%)
Frame = +2
Query: 218 VKHGIRSYCITIHILVRARLIIDARALLESVIRSSSGLIVLELLLSTYKNTFSSPFVFDL 397
++HGIRSY +TIHILV+ARL+IDARAL+ES + +SS +V + LL TY N+ S+P VFDL
Sbjct: 105 LRHGIRSYAVTIHILVKARLLIDARALIESSLLNSSSDLV-DSLLDTYVNSSSTPLVFDL 163
Query: 398 LIQTYSKLRIFDTAFDACRCLEEHGFSCSLISFNTLIHVVQK 523
L+Q Y+K+R + F+ + L + GFS S+I+ NTLIH K
Sbjct: 164 LVQCYAKIRYLELGFEVFKRLCDCGFSLSVITLNTLIHFAAK 205
Score = 35.8 bits (81), Expect(2) = 8e-26
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +3
Query: 108 LEQELSFNQVNRSIVEKVLLELKEPIDAKQALGFFHWS 221
L + S ++ S++E +LL P AK+AL FFHWS
Sbjct: 62 LSTKFSSIDLSDSLIETILLRFNSPETAKRALTFFHWS 99
>ref|NP_849849.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122215314|sp|Q3ECH5.1|PP107_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g66345, mitochondrial; Flags: Precursor
gi|332196377|gb|AEE34498.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 544
Score = 100 bits (248), Expect(2) = 4e-25
Identities = 51/103 (49%), Positives = 75/103 (72%), Gaps = 1/103 (0%)
Frame = +2
Query: 218 VKHGIRSYCITIHILVRARLIIDARALLES-VIRSSSGLIVLELLLSTYKNTFSSPFVFD 394
++HGI+SY +TIHILV+ARL+IDARAL+ES ++ S +++ LL TY+ + S+P VFD
Sbjct: 109 LRHGIKSYALTIHILVKARLLIDARALIESSLLNSPPDSDLVDSLLDTYEISSSTPLVFD 168
Query: 395 LLIQTYSKLRIFDTAFDACRCLEEHGFSCSLISFNTLIHVVQK 523
LL+Q Y+K+R + FD + L + GF+ S+I+ NTLIH K
Sbjct: 169 LLVQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNTLIHYSSK 211
Score = 40.4 bits (93), Expect(2) = 4e-25
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = +3
Query: 108 LEQELSFNQVNRSIVEKVLLELKEPIDAKQALGFFHWSN 224
L + S ++ S++E +LL K P AKQAL FFHWS+
Sbjct: 66 LSTKFSSIDLSDSLIETILLRFKNPETAKQALSFFHWSS 104
>ref|XP_007022700.1| Pentatricopeptide repeat superfamily protein, putative isoform 1
[Theobroma cacao] gi|508722328|gb|EOY14225.1|
Pentatricopeptide repeat superfamily protein, putative
isoform 1 [Theobroma cacao]
Length = 596
Score = 98.6 bits (244), Expect(2) = 5e-25
Identities = 51/105 (48%), Positives = 70/105 (66%), Gaps = 4/105 (3%)
Frame = +2
Query: 221 KHGIRSYCITIHILVRARLIIDARALLESVIRSSSG----LIVLELLLSTYKNTFSSPFV 388
KH I SYCI IHILV A+ + +A+ LL S +++S+ +LE LL +Y SS V
Sbjct: 106 KHQIYSYCIAIHILVHAKQLPEAKILLHSALKTSAPDSTRSCILESLLGSYNVVGSSTLV 165
Query: 389 FDLLIQTYSKLRIFDTAFDACRCLEEHGFSCSLISFNTLIHVVQK 523
FDLL+Q Y+KLR+ + AF+ C LE HGFS +L+SFN L+H + K
Sbjct: 166 FDLLVQAYAKLRMLEDAFEVCCYLENHGFSLTLLSFNALLHGILK 210
Score = 41.6 bits (96), Expect(2) = 5e-25
Identities = 19/40 (47%), Positives = 28/40 (70%)
Frame = +3
Query: 102 GYLEQELSFNQVNRSIVEKVLLELKEPIDAKQALGFFHWS 221
G L + S Q+ S+V++VLL+LK+P A+ AL FF+WS
Sbjct: 60 GTLTKTFSSVQLTHSLVQQVLLQLKQPEHARSALNFFYWS 99
>ref|XP_007022703.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
isoform 4 [Theobroma cacao] gi|508722331|gb|EOY14228.1|
Pentatricopeptide repeat (PPR) superfamily protein,
putative isoform 4 [Theobroma cacao]
Length = 569
Score = 98.6 bits (244), Expect(2) = 5e-25
Identities = 51/105 (48%), Positives = 70/105 (66%), Gaps = 4/105 (3%)
Frame = +2
Query: 221 KHGIRSYCITIHILVRARLIIDARALLESVIRSSSG----LIVLELLLSTYKNTFSSPFV 388
KH I SYCI IHILV A+ + +A+ LL S +++S+ +LE LL +Y SS V
Sbjct: 106 KHQIYSYCIAIHILVHAKQLPEAKILLHSALKTSAPDSTRSCILESLLGSYNVVGSSTLV 165
Query: 389 FDLLIQTYSKLRIFDTAFDACRCLEEHGFSCSLISFNTLIHVVQK 523
FDLL+Q Y+KLR+ + AF+ C LE HGFS +L+SFN L+H + K
Sbjct: 166 FDLLVQAYAKLRMLEDAFEVCCYLENHGFSLTLLSFNALLHGILK 210
Score = 41.6 bits (96), Expect(2) = 5e-25
Identities = 19/40 (47%), Positives = 28/40 (70%)
Frame = +3
Query: 102 GYLEQELSFNQVNRSIVEKVLLELKEPIDAKQALGFFHWS 221
G L + S Q+ S+V++VLL+LK+P A+ AL FF+WS
Sbjct: 60 GTLTKTFSSVQLTHSLVQQVLLQLKQPEHARSALNFFYWS 99
>ref|XP_007022702.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
isoform 3 [Theobroma cacao] gi|508722330|gb|EOY14227.1|
Pentatricopeptide repeat (PPR) superfamily protein,
putative isoform 3 [Theobroma cacao]
Length = 563
Score = 98.6 bits (244), Expect(2) = 5e-25
Identities = 51/105 (48%), Positives = 70/105 (66%), Gaps = 4/105 (3%)
Frame = +2
Query: 221 KHGIRSYCITIHILVRARLIIDARALLESVIRSSSG----LIVLELLLSTYKNTFSSPFV 388
KH I SYCI IHILV A+ + +A+ LL S +++S+ +LE LL +Y SS V
Sbjct: 106 KHQIYSYCIAIHILVHAKQLPEAKILLHSALKTSAPDSTRSCILESLLGSYNVVGSSTLV 165
Query: 389 FDLLIQTYSKLRIFDTAFDACRCLEEHGFSCSLISFNTLIHVVQK 523
FDLL+Q Y+KLR+ + AF+ C LE HGFS +L+SFN L+H + K
Sbjct: 166 FDLLVQAYAKLRMLEDAFEVCCYLENHGFSLTLLSFNALLHGILK 210
Score = 41.6 bits (96), Expect(2) = 5e-25
Identities = 19/40 (47%), Positives = 28/40 (70%)
Frame = +3
Query: 102 GYLEQELSFNQVNRSIVEKVLLELKEPIDAKQALGFFHWS 221
G L + S Q+ S+V++VLL+LK+P A+ AL FF+WS
Sbjct: 60 GTLTKTFSSVQLTHSLVQQVLLQLKQPEHARSALNFFYWS 99