BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00035173
         (528 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXC20897.1| Cleavage and polyadenylation specificity factor s...   283   2e-74
ref|XP_007220310.1| hypothetical protein PRUPE_ppa000211mg [Prun...   279   3e-73
ref|XP_004308159.1| PREDICTED: cleavage and polyadenylation spec...   275   4e-72
emb|CBI24510.3| unnamed protein product [Vitis vinifera]              273   1e-71
ref|XP_002268371.1| PREDICTED: cleavage and polyadenylation spec...   273   1e-71
ref|XP_007038473.1| Cleavage and polyadenylation specificity fac...   271   5e-71
ref|XP_002510905.1| cleavage and polyadenylation specificity fac...   264   8e-69
ref|XP_006401932.1| hypothetical protein EUTSA_v10012441mg [Eutr...   263   1e-68
ref|XP_006490256.1| PREDICTED: cleavage and polyadenylation spec...   259   4e-67
ref|XP_006490255.1| PREDICTED: cleavage and polyadenylation spec...   259   4e-67
ref|XP_006421760.1| hypothetical protein CICLE_v10004147mg [Citr...   259   4e-67
ref|XP_006421759.1| hypothetical protein CICLE_v10004147mg [Citr...   259   4e-67
ref|XP_002318462.2| cleavage and polyadenylation specificity fac...   258   5e-67
ref|XP_004152876.1| PREDICTED: cleavage and polyadenylation spec...   258   5e-67
ref|XP_002864120.1| hypothetical protein ARALYDRAFT_495232 [Arab...   258   8e-67
ref|XP_004155129.1| PREDICTED: cleavage and polyadenylation spec...   256   2e-66
ref|XP_006851814.1| hypothetical protein AMTR_s00041p00037520 [A...   253   1e-65
dbj|BAB11613.1| cleavage and polyadenylation specificity factor ...   251   6e-65
ref|NP_199979.2| cleavage and polyadenylation specificity factor...   251   6e-65
gb|AAN41460.1| putative cleavage and polyadenylation specificity...   251   6e-65

>gb|EXC20897.1| Cleavage and polyadenylation specificity factor subunit 1 [Morus
           notabilis]
          Length = 1479

 Score =  283 bits (724), Expect = 2e-74
 Identities = 135/176 (76%), Positives = 157/176 (89%), Gaps = 1/176 (0%)
 Frame = -2

Query: 527 QIPTVTSDDLETEWPA-RKGIGPIPNLVVTAGNILEVYVVRVQEEDDSKGSRFPVEAKRG 351
           +IP + SDDL+++WPA R+  GP+PNLVVTAGN+LEVYVVR+QEEDD++ SR P E++RG
Sbjct: 33  RIPPIQSDDLDSDWPAGRRETGPVPNLVVTAGNVLEVYVVRLQEEDDTRSSRAPAESRRG 92

Query: 350 GFMAGLSGAWLELVCHYKLHGNVDTMAVLSMGGSDGCKKRDSIILAFEDAKISVLEFDDS 171
           G M GLSGA LELVCHY+LHGNV T+AVLS GG DG ++RDSIIL+F+DAKISVLEFDDS
Sbjct: 93  GLMDGLSGASLELVCHYRLHGNVQTIAVLSSGGGDGSRRRDSIILSFQDAKISVLEFDDS 152

Query: 170 IYGLRTSSMHCFEGPEWHYLKRGRESFARGPLVKVDPQGRCGGVLVYGMQMIILKA 3
           I+GLRTSSMHCFEGPEW YLKRGRESFARGPLVKVDPQGRC GVL Y +QMI+LKA
Sbjct: 153 IHGLRTSSMHCFEGPEWLYLKRGRESFARGPLVKVDPQGRCAGVLAYNIQMIMLKA 208


>ref|XP_007220310.1| hypothetical protein PRUPE_ppa000211mg [Prunus persica]
           gi|462416772|gb|EMJ21509.1| hypothetical protein
           PRUPE_ppa000211mg [Prunus persica]
          Length = 1459

 Score =  279 bits (713), Expect = 3e-73
 Identities = 136/176 (77%), Positives = 156/176 (88%), Gaps = 1/176 (0%)
 Frame = -2

Query: 527 QIPTVTSDDLETEWP-ARKGIGPIPNLVVTAGNILEVYVVRVQEEDDSKGSRFPVEAKRG 351
           +IP + ++DLE+EWP +R+ IGPIP+LVVTAGN+LEVYVVRVQEED ++G R   E KRG
Sbjct: 33  RIPPIQTEDLESEWPTSRREIGPIPDLVVTAGNVLEVYVVRVQEEDGTRGPRASGEPKRG 92

Query: 350 GFMAGLSGAWLELVCHYKLHGNVDTMAVLSMGGSDGCKKRDSIILAFEDAKISVLEFDDS 171
           G M G+SGA LELVCHY+LHGNV TMAVLS GG DG ++RDSIIL FEDAKISVLEFDDS
Sbjct: 93  GLMDGVSGASLELVCHYRLHGNVVTMAVLSSGGGDGSRRRDSIILTFEDAKISVLEFDDS 152

Query: 170 IYGLRTSSMHCFEGPEWHYLKRGRESFARGPLVKVDPQGRCGGVLVYGMQMIILKA 3
           I+GLRTSSMHCFEGPEW +L+RGRESFARGPLVKVDPQGRCG +LVYG+QMIILKA
Sbjct: 153 IHGLRTSSMHCFEGPEWLHLRRGRESFARGPLVKVDPQGRCGSILVYGLQMIILKA 208


>ref|XP_004308159.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1-like [Fragaria vesca subsp. vesca]
          Length = 1439

 Score =  275 bits (704), Expect = 4e-72
 Identities = 133/176 (75%), Positives = 156/176 (88%), Gaps = 1/176 (0%)
 Frame = -2

Query: 527 QIPTVTSDDLETEWPA-RKGIGPIPNLVVTAGNILEVYVVRVQEEDDSKGSRFPVEAKRG 351
           +IP + +DDL+++WPA R+ IGP+PNLVVTA N+LEVYVVRVQE+D ++GSR   E+KRG
Sbjct: 33  RIPQIQTDDLDSDWPAPRREIGPVPNLVVTAANVLEVYVVRVQEQDTARGSRASGESKRG 92

Query: 350 GFMAGLSGAWLELVCHYKLHGNVDTMAVLSMGGSDGCKKRDSIILAFEDAKISVLEFDDS 171
           G M G++GA LELVCHY+LHGNV TMAVLS GG DG K+RD+IIL FEDAKISVLEFDDS
Sbjct: 93  GLMDGVAGASLELVCHYRLHGNVMTMAVLSSGGGDGSKRRDAIILTFEDAKISVLEFDDS 152

Query: 170 IYGLRTSSMHCFEGPEWHYLKRGRESFARGPLVKVDPQGRCGGVLVYGMQMIILKA 3
           I+GLRTSSMHCFEGPEW +L+RGRESFARGP VKVDPQGRCGGVLVY +Q+IILKA
Sbjct: 153 IHGLRTSSMHCFEGPEWLHLRRGRESFARGPSVKVDPQGRCGGVLVYDLQLIILKA 208


>emb|CBI24510.3| unnamed protein product [Vitis vinifera]
          Length = 1448

 Score =  273 bits (699), Expect = 1e-71
 Identities = 133/175 (76%), Positives = 151/175 (86%)
 Frame = -2

Query: 527 QIPTVTSDDLETEWPARKGIGPIPNLVVTAGNILEVYVVRVQEEDDSKGSRFPVEAKRGG 348
           QI  + +DDLE+EWP ++ IGP+PNL+VTA NILEVY+VRVQE DDS+ SR   E KRGG
Sbjct: 33  QIAPIQTDDLESEWPTKRQIGPLPNLIVTAANILEVYMVRVQE-DDSRESRASAETKRGG 91

Query: 347 FMAGLSGAWLELVCHYKLHGNVDTMAVLSMGGSDGCKKRDSIILAFEDAKISVLEFDDSI 168
            MAG+SGA LELVC Y+LHGNV+TM VL  GG D  ++RDSIILAF+DAKISVLEFDDSI
Sbjct: 92  VMAGISGAALELVCQYRLHGNVETMTVLPSGGGDNSRRRDSIILAFQDAKISVLEFDDSI 151

Query: 167 YGLRTSSMHCFEGPEWHYLKRGRESFARGPLVKVDPQGRCGGVLVYGMQMIILKA 3
           +GLRTSSMHCFEGPEW +LKRG ESFARGPLVKVDPQGRC GVLVYG+QMIILKA
Sbjct: 152 HGLRTSSMHCFEGPEWFHLKRGHESFARGPLVKVDPQGRCSGVLVYGLQMIILKA 206


>ref|XP_002268371.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1-like [Vitis vinifera]
          Length = 1442

 Score =  273 bits (699), Expect = 1e-71
 Identities = 133/175 (76%), Positives = 151/175 (86%)
 Frame = -2

Query: 527 QIPTVTSDDLETEWPARKGIGPIPNLVVTAGNILEVYVVRVQEEDDSKGSRFPVEAKRGG 348
           QI  + +DDLE+EWP ++ IGP+PNL+VTA NILEVY+VRVQE DDS+ SR   E KRGG
Sbjct: 33  QIAPIQTDDLESEWPTKRQIGPLPNLIVTAANILEVYMVRVQE-DDSRESRASAETKRGG 91

Query: 347 FMAGLSGAWLELVCHYKLHGNVDTMAVLSMGGSDGCKKRDSIILAFEDAKISVLEFDDSI 168
            MAG+SGA LELVC Y+LHGNV+TM VL  GG D  ++RDSIILAF+DAKISVLEFDDSI
Sbjct: 92  VMAGISGAALELVCQYRLHGNVETMTVLPSGGGDNSRRRDSIILAFQDAKISVLEFDDSI 151

Query: 167 YGLRTSSMHCFEGPEWHYLKRGRESFARGPLVKVDPQGRCGGVLVYGMQMIILKA 3
           +GLRTSSMHCFEGPEW +LKRG ESFARGPLVKVDPQGRC GVLVYG+QMIILKA
Sbjct: 152 HGLRTSSMHCFEGPEWFHLKRGHESFARGPLVKVDPQGRCSGVLVYGLQMIILKA 206


>ref|XP_007038473.1| Cleavage and polyadenylation specificity factor 160 isoform 1
           [Theobroma cacao] gi|508775718|gb|EOY22974.1| Cleavage
           and polyadenylation specificity factor 160 isoform 1
           [Theobroma cacao]
          Length = 1457

 Score =  271 bits (694), Expect = 5e-71
 Identities = 131/175 (74%), Positives = 155/175 (88%)
 Frame = -2

Query: 527 QIPTVTSDDLETEWPARKGIGPIPNLVVTAGNILEVYVVRVQEEDDSKGSRFPVEAKRGG 348
           QIP   ++DLE+EWPAR+GIGP+PNL+VTA N+LE+YVVRVQEE   + +R   E KRGG
Sbjct: 33  QIPLNQTEDLESEWPARRGIGPVPNLIVTAANLLEIYVVRVQEEG-RREARNSTEVKRGG 91

Query: 347 FMAGLSGAWLELVCHYKLHGNVDTMAVLSMGGSDGCKKRDSIILAFEDAKISVLEFDDSI 168
            + G+SG  LELVC+Y+LHGNV++MAVLS+GG DG ++RDSIILAF+DAKISVLEFDDSI
Sbjct: 92  VLDGVSGVSLELVCNYRLHGNVESMAVLSIGGGDGSRRRDSIILAFKDAKISVLEFDDSI 151

Query: 167 YGLRTSSMHCFEGPEWHYLKRGRESFARGPLVKVDPQGRCGGVLVYGMQMIILKA 3
           +GLRT+SMHCFEGPEW +LKRGRESFARGPLVKVDPQGRCGGVLVY +QMIILKA
Sbjct: 152 HGLRTTSMHCFEGPEWLHLKRGRESFARGPLVKVDPQGRCGGVLVYDLQMIILKA 206


>ref|XP_002510905.1| cleavage and polyadenylation specificity factor cpsf, putative
           [Ricinus communis] gi|223550020|gb|EEF51507.1| cleavage
           and polyadenylation specificity factor cpsf, putative
           [Ricinus communis]
          Length = 1461

 Score =  264 bits (675), Expect = 8e-69
 Identities = 129/176 (73%), Positives = 154/176 (87%), Gaps = 1/176 (0%)
 Frame = -2

Query: 527 QIPTVTSDDLETEWP-ARKGIGPIPNLVVTAGNILEVYVVRVQEEDDSKGSRFPVEAKRG 351
           QIP + +D+L++EWP +++GIGP+PNL+VTAG++LEVYVVRVQE D S+ SR   E KRG
Sbjct: 33  QIPPIQTDNLDSEWPPSKRGIGPMPNLIVTAGSVLEVYVVRVQE-DGSRESRSSRETKRG 91

Query: 350 GFMAGLSGAWLELVCHYKLHGNVDTMAVLSMGGSDGCKKRDSIILAFEDAKISVLEFDDS 171
           G M G+SGA LELVCHY+LHGNV++M VL   G D  ++RDSIILAF+DAKISVLEFDDS
Sbjct: 92  GLMDGVSGASLELVCHYRLHGNVESMVVLPTEGGDSSRRRDSIILAFKDAKISVLEFDDS 151

Query: 170 IYGLRTSSMHCFEGPEWHYLKRGRESFARGPLVKVDPQGRCGGVLVYGMQMIILKA 3
           I+GLRTSSMHCFEGPEW +LKRGRESFARGPL+KVDPQGRCGG+LVY MQMIIL+A
Sbjct: 152 IHGLRTSSMHCFEGPEWLHLKRGRESFARGPLLKVDPQGRCGGILVYDMQMIILRA 207


>ref|XP_006401932.1| hypothetical protein EUTSA_v10012441mg [Eutrema salsugineum]
           gi|557103022|gb|ESQ43385.1| hypothetical protein
           EUTSA_v10012441mg [Eutrema salsugineum]
          Length = 1445

 Score =  263 bits (673), Expect = 1e-68
 Identities = 130/177 (73%), Positives = 151/177 (85%), Gaps = 2/177 (1%)
 Frame = -2

Query: 527 QIPTVTSDDLETEWPA-RKGIGPIPNLVVTAGNILEVYVVRVQEE-DDSKGSRFPVEAKR 354
           QIP V+ DDLE EWPA ++GIG +PN+V+TAGNILEVYVVRVQEE + S+  R P   +R
Sbjct: 34  QIPIVSGDDLEAEWPAPKRGIGAVPNVVITAGNILEVYVVRVQEEVNTSQEPRNPKLVRR 93

Query: 353 GGFMAGLSGAWLELVCHYKLHGNVDTMAVLSMGGSDGCKKRDSIILAFEDAKISVLEFDD 174
           GG M G+SG  LELVCHY+LHGNV+++AVL MGG +  K RDSI+L F DAKISVLEFDD
Sbjct: 94  GGVMEGVSGVSLELVCHYRLHGNVESLAVLPMGGGNSSKGRDSIVLTFRDAKISVLEFDD 153

Query: 173 SIYGLRTSSMHCFEGPEWHYLKRGRESFARGPLVKVDPQGRCGGVLVYGMQMIILKA 3
           SI+GLR +SMHCFEGP+W +LKRGRESFARGPLVKVDPQGRCGGVLVYG+QMIILKA
Sbjct: 154 SIHGLRMNSMHCFEGPDWLHLKRGRESFARGPLVKVDPQGRCGGVLVYGLQMIILKA 210


>ref|XP_006490256.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1-like isoform X2 [Citrus sinensis]
          Length = 1457

 Score =  259 bits (661), Expect = 4e-67
 Identities = 125/175 (71%), Positives = 152/175 (86%)
 Frame = -2

Query: 527 QIPTVTSDDLETEWPARKGIGPIPNLVVTAGNILEVYVVRVQEEDDSKGSRFPVEAKRGG 348
           QIP + +++L++E P+++GIGP+PNLVVTA N++E+YVVRVQEE  SK S+   E KR  
Sbjct: 33  QIPLIQTEELDSELPSKRGIGPVPNLVVTAANVIEIYVVRVQEEG-SKESKNSGETKRRV 91

Query: 347 FMAGLSGAWLELVCHYKLHGNVDTMAVLSMGGSDGCKKRDSIILAFEDAKISVLEFDDSI 168
            M G+S A LELVCHY+LHGNV+++A+LS GG+D  ++RDSIILAFEDAKISVLEFDDSI
Sbjct: 92  LMDGISAASLELVCHYRLHGNVESLAILSQGGADNSRRRDSIILAFEDAKISVLEFDDSI 151

Query: 167 YGLRTSSMHCFEGPEWHYLKRGRESFARGPLVKVDPQGRCGGVLVYGMQMIILKA 3
           +GLR +SMHCFE PEW +LKRGRESFARGPLVKVDPQGRCGGVLVYG+QMIILKA
Sbjct: 152 HGLRITSMHCFESPEWLHLKRGRESFARGPLVKVDPQGRCGGVLVYGLQMIILKA 206


>ref|XP_006490255.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1-like isoform X1 [Citrus sinensis]
          Length = 1458

 Score =  259 bits (661), Expect = 4e-67
 Identities = 125/175 (71%), Positives = 152/175 (86%)
 Frame = -2

Query: 527 QIPTVTSDDLETEWPARKGIGPIPNLVVTAGNILEVYVVRVQEEDDSKGSRFPVEAKRGG 348
           QIP + +++L++E P+++GIGP+PNLVVTA N++E+YVVRVQEE  SK S+   E KR  
Sbjct: 33  QIPLIQTEELDSELPSKRGIGPVPNLVVTAANVIEIYVVRVQEEG-SKESKNSGETKRRV 91

Query: 347 FMAGLSGAWLELVCHYKLHGNVDTMAVLSMGGSDGCKKRDSIILAFEDAKISVLEFDDSI 168
            M G+S A LELVCHY+LHGNV+++A+LS GG+D  ++RDSIILAFEDAKISVLEFDDSI
Sbjct: 92  LMDGISAASLELVCHYRLHGNVESLAILSQGGADNSRRRDSIILAFEDAKISVLEFDDSI 151

Query: 167 YGLRTSSMHCFEGPEWHYLKRGRESFARGPLVKVDPQGRCGGVLVYGMQMIILKA 3
           +GLR +SMHCFE PEW +LKRGRESFARGPLVKVDPQGRCGGVLVYG+QMIILKA
Sbjct: 152 HGLRITSMHCFESPEWLHLKRGRESFARGPLVKVDPQGRCGGVLVYGLQMIILKA 206


>ref|XP_006421760.1| hypothetical protein CICLE_v10004147mg [Citrus clementina]
           gi|557523633|gb|ESR35000.1| hypothetical protein
           CICLE_v10004147mg [Citrus clementina]
          Length = 1457

 Score =  259 bits (661), Expect = 4e-67
 Identities = 125/175 (71%), Positives = 152/175 (86%)
 Frame = -2

Query: 527 QIPTVTSDDLETEWPARKGIGPIPNLVVTAGNILEVYVVRVQEEDDSKGSRFPVEAKRGG 348
           QIP + +++L++E P+++GIGP+PNLVVTA N++E+YVVRVQEE  SK S+   E KR  
Sbjct: 33  QIPLIQTEELDSELPSKRGIGPVPNLVVTAANVIEIYVVRVQEEG-SKESKNSGETKRRV 91

Query: 347 FMAGLSGAWLELVCHYKLHGNVDTMAVLSMGGSDGCKKRDSIILAFEDAKISVLEFDDSI 168
            M G+S A LELVCHY+LHGNV+++A+LS GG+D  ++RDSIILAFEDAKISVLEFDDSI
Sbjct: 92  LMDGISAASLELVCHYRLHGNVESLAILSQGGADNSRRRDSIILAFEDAKISVLEFDDSI 151

Query: 167 YGLRTSSMHCFEGPEWHYLKRGRESFARGPLVKVDPQGRCGGVLVYGMQMIILKA 3
           +GLR +SMHCFE PEW +LKRGRESFARGPLVKVDPQGRCGGVLVYG+QMIILKA
Sbjct: 152 HGLRITSMHCFESPEWLHLKRGRESFARGPLVKVDPQGRCGGVLVYGLQMIILKA 206


>ref|XP_006421759.1| hypothetical protein CICLE_v10004147mg [Citrus clementina]
           gi|557523632|gb|ESR34999.1| hypothetical protein
           CICLE_v10004147mg [Citrus clementina]
          Length = 1458

 Score =  259 bits (661), Expect = 4e-67
 Identities = 125/175 (71%), Positives = 152/175 (86%)
 Frame = -2

Query: 527 QIPTVTSDDLETEWPARKGIGPIPNLVVTAGNILEVYVVRVQEEDDSKGSRFPVEAKRGG 348
           QIP + +++L++E P+++GIGP+PNLVVTA N++E+YVVRVQEE  SK S+   E KR  
Sbjct: 33  QIPLIQTEELDSELPSKRGIGPVPNLVVTAANVIEIYVVRVQEEG-SKESKNSGETKRRV 91

Query: 347 FMAGLSGAWLELVCHYKLHGNVDTMAVLSMGGSDGCKKRDSIILAFEDAKISVLEFDDSI 168
            M G+S A LELVCHY+LHGNV+++A+LS GG+D  ++RDSIILAFEDAKISVLEFDDSI
Sbjct: 92  LMDGISAASLELVCHYRLHGNVESLAILSQGGADNSRRRDSIILAFEDAKISVLEFDDSI 151

Query: 167 YGLRTSSMHCFEGPEWHYLKRGRESFARGPLVKVDPQGRCGGVLVYGMQMIILKA 3
           +GLR +SMHCFE PEW +LKRGRESFARGPLVKVDPQGRCGGVLVYG+QMIILKA
Sbjct: 152 HGLRITSMHCFESPEWLHLKRGRESFARGPLVKVDPQGRCGGVLVYGLQMIILKA 206


>ref|XP_002318462.2| cleavage and polyadenylation specificity factor family protein
           [Populus trichocarpa] gi|550326263|gb|EEE96682.2|
           cleavage and polyadenylation specificity factor family
           protein [Populus trichocarpa]
          Length = 1455

 Score =  258 bits (660), Expect = 5e-67
 Identities = 126/178 (70%), Positives = 152/178 (85%), Gaps = 4/178 (2%)
 Frame = -2

Query: 524 IPTVTSDDLETEWPARK----GIGPIPNLVVTAGNILEVYVVRVQEEDDSKGSRFPVEAK 357
           +P + +DDL+++WP+R+    GIGP PNL+V +GN+LE+YVVRVQEE    G+R   E K
Sbjct: 33  LPQLHTDDLDSDWPSRRRHGGGIGPTPNLIVASGNVLELYVVRVQEE----GARSSGELK 88

Query: 356 RGGFMAGLSGAWLELVCHYKLHGNVDTMAVLSMGGSDGCKKRDSIILAFEDAKISVLEFD 177
           RGG M G++GA LELVCHY+LHGNV++M VLS+ G D  ++RDSIILAF+DAKISVLEFD
Sbjct: 89  RGGVMDGVAGASLELVCHYRLHGNVESMGVLSVEGGDDSRRRDSIILAFKDAKISVLEFD 148

Query: 176 DSIYGLRTSSMHCFEGPEWHYLKRGRESFARGPLVKVDPQGRCGGVLVYGMQMIILKA 3
           DSI+GLRTSSMHCFEGP+W +LKRGRESFARGPLVKVDPQGRCGGVLVY +QMIILKA
Sbjct: 149 DSIHGLRTSSMHCFEGPDWRHLKRGRESFARGPLVKVDPQGRCGGVLVYDLQMIILKA 206


>ref|XP_004152876.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1-like [Cucumis sativus]
          Length = 1504

 Score =  258 bits (660), Expect = 5e-67
 Identities = 127/176 (72%), Positives = 150/176 (85%), Gaps = 2/176 (1%)
 Frame = -2

Query: 524 IPTVTS--DDLETEWPARKGIGPIPNLVVTAGNILEVYVVRVQEEDDSKGSRFPVEAKRG 351
           +P VTS  DDL+++W  R+ IGP+PNLVVTAGN+LEVYVVRV EE   + S+   E +RG
Sbjct: 31  VPAVTSHSDDLDSDWHPRRDIGPVPNLVVTAGNVLEVYVVRVLEEG-GRESKSSGEVRRG 89

Query: 350 GFMAGLSGAWLELVCHYKLHGNVDTMAVLSMGGSDGCKKRDSIILAFEDAKISVLEFDDS 171
           G M G+SGA LELVCHY+LHGNV++MA+LS  G DG KKRDSIIL F++AKISVLEFDDS
Sbjct: 90  GIMDGVSGASLELVCHYRLHGNVESMAILSSRGGDGSKKRDSIILVFQEAKISVLEFDDS 149

Query: 170 IYGLRTSSMHCFEGPEWHYLKRGRESFARGPLVKVDPQGRCGGVLVYGMQMIILKA 3
            + LRTSSMHCF+GP+W +LKRGRESFARGP+VKVDPQGRCGGVLVYG+QMIILKA
Sbjct: 150 THSLRTSSMHCFDGPQWLHLKRGRESFARGPVVKVDPQGRCGGVLVYGLQMIILKA 205


>ref|XP_002864120.1| hypothetical protein ARALYDRAFT_495232 [Arabidopsis lyrata subsp.
           lyrata] gi|297309955|gb|EFH40379.1| hypothetical protein
           ARALYDRAFT_495232 [Arabidopsis lyrata subsp. lyrata]
          Length = 1444

 Score =  258 bits (658), Expect = 8e-67
 Identities = 127/177 (71%), Positives = 147/177 (83%), Gaps = 2/177 (1%)
 Frame = -2

Query: 527 QIPTVTSDD-LETEWPARK-GIGPIPNLVVTAGNILEVYVVRVQEEDDSKGSRFPVEAKR 354
           QIP V+ DD +E EWP  K GIGP+PN+V+TAGNILEVY+VR QEE +++  R P   KR
Sbjct: 33  QIPIVSGDDDMEAEWPNHKRGIGPLPNVVITAGNILEVYIVRAQEEGNTQELRIPKLVKR 92

Query: 353 GGFMAGLSGAWLELVCHYKLHGNVDTMAVLSMGGSDGCKKRDSIILAFEDAKISVLEFDD 174
           GG M G+SG  LELVCHY+LHGNV+++AVL MGG +  K RDSIIL F DAKISVLEFDD
Sbjct: 93  GGVMDGVSGVSLELVCHYRLHGNVESIAVLPMGGGNSSKGRDSIILTFRDAKISVLEFDD 152

Query: 173 SIYGLRTSSMHCFEGPEWHYLKRGRESFARGPLVKVDPQGRCGGVLVYGMQMIILKA 3
           SI+ LR +SMHCFEGP+W +LKRGRESF RGPLVKVDPQGRCGGVLVYG+QMIILKA
Sbjct: 153 SIHSLRMTSMHCFEGPDWLHLKRGRESFPRGPLVKVDPQGRCGGVLVYGLQMIILKA 209


>ref|XP_004155129.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1-like [Cucumis sativus]
          Length = 643

 Score =  256 bits (655), Expect = 2e-66
 Identities = 127/176 (72%), Positives = 149/176 (84%), Gaps = 2/176 (1%)
 Frame = -2

Query: 524 IPTVTS--DDLETEWPARKGIGPIPNLVVTAGNILEVYVVRVQEEDDSKGSRFPVEAKRG 351
           +P VTS  DDL+++W  R+ IGP+PNLVVTAGN+LEVYVVRV EE   + S+   E KRG
Sbjct: 31  VPAVTSHSDDLDSDWHPRRDIGPVPNLVVTAGNVLEVYVVRVLEEG-GRESKSSGEVKRG 89

Query: 350 GFMAGLSGAWLELVCHYKLHGNVDTMAVLSMGGSDGCKKRDSIILAFEDAKISVLEFDDS 171
           G M G+S A LELVCHY+LHGNV++MA+LS  G DG KKRDSIIL F++AKISVLEFDDS
Sbjct: 90  GIMDGVSWASLELVCHYRLHGNVESMAILSSRGGDGSKKRDSIILVFQEAKISVLEFDDS 149

Query: 170 IYGLRTSSMHCFEGPEWHYLKRGRESFARGPLVKVDPQGRCGGVLVYGMQMIILKA 3
            + LRTSSMHCF+GP+W +LKRGRESFARGP+VKVDPQGRCGGVLVYG+QMIILKA
Sbjct: 150 THSLRTSSMHCFDGPQWLHLKRGRESFARGPVVKVDPQGRCGGVLVYGLQMIILKA 205


>ref|XP_006851814.1| hypothetical protein AMTR_s00041p00037520 [Amborella trichopoda]
           gi|548855397|gb|ERN13281.1| hypothetical protein
           AMTR_s00041p00037520 [Amborella trichopoda]
          Length = 1459

 Score =  253 bits (647), Expect = 1e-65
 Identities = 122/179 (68%), Positives = 148/179 (82%), Gaps = 5/179 (2%)
 Frame = -2

Query: 524 IPTVTSDDLETEW---PARKGIGPIPNLVVTAGNILEVYVVRVQEEDD--SKGSRFPVEA 360
           +P + +DD ++EW   P +  IGPIPNLV++A N+LEVYV+RVQEED   S+ S     +
Sbjct: 34  VPAIQNDDPDSEWDQPPVKARIGPIPNLVISAANVLEVYVIRVQEEDSKASRHSGASSGS 93

Query: 359 KRGGFMAGLSGAWLELVCHYKLHGNVDTMAVLSMGGSDGCKKRDSIILAFEDAKISVLEF 180
           K GG +AG+SGAWLELVCHY+LHGNV+TMA+LS G  DG +KRDSIIL F++AKISVLE+
Sbjct: 94  KGGGVVAGVSGAWLELVCHYRLHGNVETMAILSAGSDDGRRKRDSIILTFKEAKISVLEY 153

Query: 179 DDSIYGLRTSSMHCFEGPEWHYLKRGRESFARGPLVKVDPQGRCGGVLVYGMQMIILKA 3
           DDS++GLRTSSMHCFEGPEW YLKRGRE+FARGPLV VDPQGRCGGVL+   QM+ILKA
Sbjct: 154 DDSLHGLRTSSMHCFEGPEWQYLKRGRENFARGPLVYVDPQGRCGGVLICDSQMLILKA 212


>dbj|BAB11613.1| cleavage and polyadenylation specificity factor subunit
           [Arabidopsis thaliana]
          Length = 1448

 Score =  251 bits (642), Expect = 6e-65
 Identities = 124/176 (70%), Positives = 146/176 (82%), Gaps = 2/176 (1%)
 Frame = -2

Query: 527 QIPTVT-SDDLETEWP-ARKGIGPIPNLVVTAGNILEVYVVRVQEEDDSKGSRFPVEAKR 354
           QIP V+  DD+E EWP  ++GIGP+PN+V+TA NILEVY+VR QEE +++  R P  AKR
Sbjct: 33  QIPIVSVHDDIEAEWPNPKRGIGPLPNVVITAANILEVYIVRAQEEGNTQELRNPKLAKR 92

Query: 353 GGFMAGLSGAWLELVCHYKLHGNVDTMAVLSMGGSDGCKKRDSIILAFEDAKISVLEFDD 174
           GG M G+ G  LELVCHY+LHGNV+++AVL MGG +  K RDSIIL F DAKISVLEFDD
Sbjct: 93  GGVMDGVYGVSLELVCHYRLHGNVESIAVLPMGGGNSSKGRDSIILTFRDAKISVLEFDD 152

Query: 173 SIYGLRTSSMHCFEGPEWHYLKRGRESFARGPLVKVDPQGRCGGVLVYGMQMIILK 6
           SI+ LR +SMHCFEGP+W +LKRGRESF RGPLVKVDPQGRCGGVLVYG+QMIILK
Sbjct: 153 SIHSLRMTSMHCFEGPDWLHLKRGRESFPRGPLVKVDPQGRCGGVLVYGLQMIILK 208


>ref|NP_199979.2| cleavage and polyadenylation specificity factor subunit 1
           [Arabidopsis thaliana]
           gi|290457637|sp|Q9FGR0.2|CPSF1_ARATH RecName:
           Full=Cleavage and polyadenylation specificity factor
           subunit 1; AltName: Full=Cleavage and polyadenylation
           specificity factor 160 kDa subunit; Short=AtCPSF160;
           Short=CPSF 160 kDa subunit gi|332008729|gb|AED96112.1|
           cleavage and polyadenylation specificity factor subunit
           1 [Arabidopsis thaliana]
          Length = 1442

 Score =  251 bits (642), Expect = 6e-65
 Identities = 124/176 (70%), Positives = 146/176 (82%), Gaps = 2/176 (1%)
 Frame = -2

Query: 527 QIPTVT-SDDLETEWP-ARKGIGPIPNLVVTAGNILEVYVVRVQEEDDSKGSRFPVEAKR 354
           QIP V+  DD+E EWP  ++GIGP+PN+V+TA NILEVY+VR QEE +++  R P  AKR
Sbjct: 33  QIPIVSVHDDIEAEWPNPKRGIGPLPNVVITAANILEVYIVRAQEEGNTQELRNPKLAKR 92

Query: 353 GGFMAGLSGAWLELVCHYKLHGNVDTMAVLSMGGSDGCKKRDSIILAFEDAKISVLEFDD 174
           GG M G+ G  LELVCHY+LHGNV+++AVL MGG +  K RDSIIL F DAKISVLEFDD
Sbjct: 93  GGVMDGVYGVSLELVCHYRLHGNVESIAVLPMGGGNSSKGRDSIILTFRDAKISVLEFDD 152

Query: 173 SIYGLRTSSMHCFEGPEWHYLKRGRESFARGPLVKVDPQGRCGGVLVYGMQMIILK 6
           SI+ LR +SMHCFEGP+W +LKRGRESF RGPLVKVDPQGRCGGVLVYG+QMIILK
Sbjct: 153 SIHSLRMTSMHCFEGPDWLHLKRGRESFPRGPLVKVDPQGRCGGVLVYGLQMIILK 208


>gb|AAN41460.1| putative cleavage and polyadenylation specificity factor 160 kDa
           subunit [Arabidopsis thaliana]
          Length = 1442

 Score =  251 bits (642), Expect = 6e-65
 Identities = 124/176 (70%), Positives = 146/176 (82%), Gaps = 2/176 (1%)
 Frame = -2

Query: 527 QIPTVT-SDDLETEWP-ARKGIGPIPNLVVTAGNILEVYVVRVQEEDDSKGSRFPVEAKR 354
           QIP V+  DD+E EWP  ++GIGP+PN+V+TA NILEVY+VR QEE +++  R P  AKR
Sbjct: 33  QIPIVSVHDDIEAEWPNPKRGIGPLPNVVITAANILEVYIVRAQEEGNTQELRNPKLAKR 92

Query: 353 GGFMAGLSGAWLELVCHYKLHGNVDTMAVLSMGGSDGCKKRDSIILAFEDAKISVLEFDD 174
           GG M G+ G  LELVCHY+LHGNV+++AVL MGG +  K RDSIIL F DAKISVLEFDD
Sbjct: 93  GGVMDGVYGVSLELVCHYRLHGNVESIAVLPMGGGNSSKGRDSIILTFRDAKISVLEFDD 152

Query: 173 SIYGLRTSSMHCFEGPEWHYLKRGRESFARGPLVKVDPQGRCGGVLVYGMQMIILK 6
           SI+ LR +SMHCFEGP+W +LKRGRESF RGPLVKVDPQGRCGGVLVYG+QMIILK
Sbjct: 153 SIHSLRMTSMHCFEGPDWLHLKRGRESFPRGPLVKVDPQGRCGGVLVYGLQMIILK 208