BLASTX nr result
ID: Sinomenium21_contig00035120
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00035120
(658 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006450758.1| hypothetical protein CICLE_v10007968mg [Citr... 92 2e-16
ref|XP_006450757.1| hypothetical protein CICLE_v10007968mg [Citr... 91 4e-16
ref|XP_006475980.1| PREDICTED: RNA polymerase sigma factor sigC-... 89 2e-15
ref|XP_006450764.1| hypothetical protein CICLE_v10007968mg [Citr... 89 2e-15
ref|XP_006450763.1| hypothetical protein CICLE_v10007968mg [Citr... 89 2e-15
ref|XP_006355305.1| PREDICTED: RNA polymerase sigma factor sigC-... 86 1e-14
ref|XP_006853783.1| hypothetical protein AMTR_s00056p00209700 [A... 86 1e-14
ref|XP_007222923.1| hypothetical protein PRUPE_ppa003696mg [Prun... 86 1e-14
ref|XP_004245130.1| PREDICTED: RNA polymerase sigma factor sigC-... 86 1e-14
emb|CAD20832.1| sigma factor [Spinacia oleracea] 84 4e-14
ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor rpoD ... 84 5e-14
emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera] 84 5e-14
ref|XP_007012219.1| RNApolymerase sigma-subunit C, putative [The... 83 7e-14
ref|XP_002308586.1| hypothetical protein POPTR_0006s25090g [Popu... 83 9e-14
ref|XP_006403640.1| hypothetical protein EUTSA_v10010251mg [Eutr... 82 1e-13
ref|XP_002516489.1| RNA polymerase sigma factor rpoD, putative [... 81 3e-13
ref|XP_004291147.1| PREDICTED: RNA polymerase sigma factor sigC-... 80 4e-13
ref|NP_190960.1| RNA polymerase sigma-subunit C [Arabidopsis tha... 80 7e-13
dbj|BAA22215.1| plastid RNA polymerase sigma-subunit [Arabidopsi... 80 7e-13
ref|XP_002877947.1| predicted protein [Arabidopsis lyrata subsp.... 80 7e-13
>ref|XP_006450758.1| hypothetical protein CICLE_v10007968mg [Citrus clementina]
gi|567917506|ref|XP_006450759.1| hypothetical protein
CICLE_v10007968mg [Citrus clementina]
gi|557553984|gb|ESR63998.1| hypothetical protein
CICLE_v10007968mg [Citrus clementina]
gi|557553985|gb|ESR63999.1| hypothetical protein
CICLE_v10007968mg [Citrus clementina]
Length = 383
Score = 91.7 bits (226), Expect = 2e-16
Identities = 43/61 (70%), Positives = 51/61 (83%)
Frame = +3
Query: 375 SYISQAGNTGVLQGSELFDHTRGYQFSTYVQYWIRKSILKLVAQHSRGIQIPVSPFCLLD 554
S + QAGN GVLQG+E FDHTRGY+FSTYVQYWIRKSI K+VA+H+RGI+IPV F +
Sbjct: 323 SDLLQAGNVGVLQGAERFDHTRGYKFSTYVQYWIRKSISKMVARHARGIKIPVPLFLICA 382
Query: 555 N 557
N
Sbjct: 383 N 383
>ref|XP_006450757.1| hypothetical protein CICLE_v10007968mg [Citrus clementina]
gi|567917512|ref|XP_006450762.1| hypothetical protein
CICLE_v10007968mg [Citrus clementina]
gi|557553983|gb|ESR63997.1| hypothetical protein
CICLE_v10007968mg [Citrus clementina]
gi|557553988|gb|ESR64002.1| hypothetical protein
CICLE_v10007968mg [Citrus clementina]
Length = 381
Score = 90.5 bits (223), Expect = 4e-16
Identities = 42/58 (72%), Positives = 50/58 (86%)
Frame = +3
Query: 375 SYISQAGNTGVLQGSELFDHTRGYQFSTYVQYWIRKSILKLVAQHSRGIQIPVSPFCL 548
S + QAGN GVLQG+E FDHTRGY+FSTYVQYWIRKSI K+VA+H+RGI+IPV F +
Sbjct: 323 SDLLQAGNVGVLQGAERFDHTRGYKFSTYVQYWIRKSISKMVARHARGIKIPVPLFLI 380
>ref|XP_006475980.1| PREDICTED: RNA polymerase sigma factor sigC-like [Citrus sinensis]
Length = 534
Score = 88.6 bits (218), Expect = 2e-15
Identities = 43/62 (69%), Positives = 51/62 (82%)
Frame = +3
Query: 375 SYISQAGNTGVLQGSELFDHTRGYQFSTYVQYWIRKSILKLVAQHSRGIQIPVSPFCLLD 554
S + QAGN GVLQG+E FDHTRGY+FSTYVQYWIRKSI K+VA+H+RGI+IP C L+
Sbjct: 323 SDLLQAGNVGVLQGAERFDHTRGYKFSTYVQYWIRKSISKMVARHARGIKIP----CKLN 378
Query: 555 NE 560
E
Sbjct: 379 RE 380
>ref|XP_006450764.1| hypothetical protein CICLE_v10007968mg [Citrus clementina]
gi|557553990|gb|ESR64004.1| hypothetical protein
CICLE_v10007968mg [Citrus clementina]
Length = 442
Score = 88.6 bits (218), Expect = 2e-15
Identities = 43/62 (69%), Positives = 51/62 (82%)
Frame = +3
Query: 375 SYISQAGNTGVLQGSELFDHTRGYQFSTYVQYWIRKSILKLVAQHSRGIQIPVSPFCLLD 554
S + QAGN GVLQG+E FDHTRGY+FSTYVQYWIRKSI K+VA+H+RGI+IP C L+
Sbjct: 323 SDLLQAGNVGVLQGAERFDHTRGYKFSTYVQYWIRKSISKMVARHARGIKIP----CKLN 378
Query: 555 NE 560
E
Sbjct: 379 RE 380
>ref|XP_006450763.1| hypothetical protein CICLE_v10007968mg [Citrus clementina]
gi|557553989|gb|ESR64003.1| hypothetical protein
CICLE_v10007968mg [Citrus clementina]
Length = 534
Score = 88.6 bits (218), Expect = 2e-15
Identities = 43/62 (69%), Positives = 51/62 (82%)
Frame = +3
Query: 375 SYISQAGNTGVLQGSELFDHTRGYQFSTYVQYWIRKSILKLVAQHSRGIQIPVSPFCLLD 554
S + QAGN GVLQG+E FDHTRGY+FSTYVQYWIRKSI K+VA+H+RGI+IP C L+
Sbjct: 323 SDLLQAGNVGVLQGAERFDHTRGYKFSTYVQYWIRKSISKMVARHARGIKIP----CKLN 378
Query: 555 NE 560
E
Sbjct: 379 RE 380
>ref|XP_006355305.1| PREDICTED: RNA polymerase sigma factor sigC-like [Solanum
tuberosum]
Length = 555
Score = 85.9 bits (211), Expect = 1e-14
Identities = 40/58 (68%), Positives = 49/58 (84%)
Frame = +3
Query: 387 QAGNTGVLQGSELFDHTRGYQFSTYVQYWIRKSILKLVAQHSRGIQIPVSPFCLLDNE 560
QAGN GVLQG+ FDHTRGY+FSTYVQYWIRKS+ KLVAQH+RG++IP + C + N+
Sbjct: 349 QAGNMGVLQGAVRFDHTRGYKFSTYVQYWIRKSLSKLVAQHARGVRIPFT-ICKVINQ 405
>ref|XP_006853783.1| hypothetical protein AMTR_s00056p00209700 [Amborella trichopoda]
gi|548857444|gb|ERN15250.1| hypothetical protein
AMTR_s00056p00209700 [Amborella trichopoda]
Length = 529
Score = 85.9 bits (211), Expect = 1e-14
Identities = 38/50 (76%), Positives = 46/50 (92%)
Frame = +3
Query: 387 QAGNTGVLQGSELFDHTRGYQFSTYVQYWIRKSILKLVAQHSRGIQIPVS 536
QAG+ GVLQG+E FDHTRGY+FSTYVQYWIRKS+ LVA+HSRG+QIP++
Sbjct: 322 QAGSLGVLQGAERFDHTRGYRFSTYVQYWIRKSLSALVARHSRGVQIPMA 371
>ref|XP_007222923.1| hypothetical protein PRUPE_ppa003696mg [Prunus persica]
gi|462419859|gb|EMJ24122.1| hypothetical protein
PRUPE_ppa003696mg [Prunus persica]
Length = 555
Score = 85.9 bits (211), Expect = 1e-14
Identities = 37/50 (74%), Positives = 46/50 (92%)
Frame = +3
Query: 381 ISQAGNTGVLQGSELFDHTRGYQFSTYVQYWIRKSILKLVAQHSRGIQIP 530
+ QAGN G+LQG+E FDH+RGY+FSTYVQYWIRKS+ +LVAQH+RG+QIP
Sbjct: 346 LMQAGNLGLLQGAERFDHSRGYRFSTYVQYWIRKSMSRLVAQHARGVQIP 395
>ref|XP_004245130.1| PREDICTED: RNA polymerase sigma factor sigC-like [Solanum
lycopersicum]
Length = 551
Score = 85.9 bits (211), Expect = 1e-14
Identities = 40/58 (68%), Positives = 49/58 (84%)
Frame = +3
Query: 387 QAGNTGVLQGSELFDHTRGYQFSTYVQYWIRKSILKLVAQHSRGIQIPVSPFCLLDNE 560
QAGN GVLQG+ FDHTRGY+FSTYVQYWIRKS+ KLVAQH+RG++IP + C + N+
Sbjct: 345 QAGNMGVLQGAVRFDHTRGYKFSTYVQYWIRKSLSKLVAQHARGVRIPFT-ICKVINQ 401
>emb|CAD20832.1| sigma factor [Spinacia oleracea]
Length = 548
Score = 84.0 bits (206), Expect = 4e-14
Identities = 35/52 (67%), Positives = 46/52 (88%)
Frame = +3
Query: 381 ISQAGNTGVLQGSELFDHTRGYQFSTYVQYWIRKSILKLVAQHSRGIQIPVS 536
+ QAGN G+LQG+E FDHTRGYQFSTYVQYWIRK++ +LV++H RGI++P +
Sbjct: 340 LMQAGNIGILQGAERFDHTRGYQFSTYVQYWIRKAMSQLVSRHGRGIKVPTT 391
>ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera]
gi|296081598|emb|CBI20603.3| unnamed protein product
[Vitis vinifera]
Length = 561
Score = 83.6 bits (205), Expect = 5e-14
Identities = 37/50 (74%), Positives = 45/50 (90%)
Frame = +3
Query: 381 ISQAGNTGVLQGSELFDHTRGYQFSTYVQYWIRKSILKLVAQHSRGIQIP 530
I QAGN GVLQG+E FDHT+GY+FSTYVQYWIRKS+ LVA+H+RG++IP
Sbjct: 352 ILQAGNLGVLQGAERFDHTKGYRFSTYVQYWIRKSMSTLVARHARGVKIP 401
>emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera]
Length = 611
Score = 83.6 bits (205), Expect = 5e-14
Identities = 37/50 (74%), Positives = 45/50 (90%)
Frame = +3
Query: 381 ISQAGNTGVLQGSELFDHTRGYQFSTYVQYWIRKSILKLVAQHSRGIQIP 530
I QAGN GVLQG+E FDHT+GY+FSTYVQYWIRKS+ LVA+H+RG++IP
Sbjct: 402 ILQAGNLGVLQGAERFDHTKGYRFSTYVQYWIRKSMSTLVARHARGVKIP 451
>ref|XP_007012219.1| RNApolymerase sigma-subunit C, putative [Theobroma cacao]
gi|508782582|gb|EOY29838.1| RNApolymerase sigma-subunit
C, putative [Theobroma cacao]
Length = 848
Score = 83.2 bits (204), Expect = 7e-14
Identities = 35/48 (72%), Positives = 45/48 (93%)
Frame = +3
Query: 387 QAGNTGVLQGSELFDHTRGYQFSTYVQYWIRKSILKLVAQHSRGIQIP 530
QAG+ GVLQG+E FDHTRGY+FSTYVQ+WIRKS+ ++VA+H+RGIQ+P
Sbjct: 641 QAGSLGVLQGAERFDHTRGYRFSTYVQFWIRKSVSRIVARHARGIQVP 688
>ref|XP_002308586.1| hypothetical protein POPTR_0006s25090g [Populus trichocarpa]
gi|222854562|gb|EEE92109.1| hypothetical protein
POPTR_0006s25090g [Populus trichocarpa]
Length = 559
Score = 82.8 bits (203), Expect = 9e-14
Identities = 37/48 (77%), Positives = 44/48 (91%)
Frame = +3
Query: 387 QAGNTGVLQGSELFDHTRGYQFSTYVQYWIRKSILKLVAQHSRGIQIP 530
QAGN G+LQG+E FD TRGY+FSTYVQYWIRKS+LK+V +H+RGIQIP
Sbjct: 352 QAGNLGLLQGAERFDPTRGYRFSTYVQYWIRKSMLKIVERHARGIQIP 399
>ref|XP_006403640.1| hypothetical protein EUTSA_v10010251mg [Eutrema salsugineum]
gi|312281919|dbj|BAJ33825.1| unnamed protein product
[Thellungiella halophila] gi|557104759|gb|ESQ45093.1|
hypothetical protein EUTSA_v10010251mg [Eutrema
salsugineum]
Length = 562
Score = 82.4 bits (202), Expect = 1e-13
Identities = 36/50 (72%), Positives = 44/50 (88%)
Frame = +3
Query: 387 QAGNTGVLQGSELFDHTRGYQFSTYVQYWIRKSILKLVAQHSRGIQIPVS 536
QAGN GVLQG+E FDHTRGY+FSTYVQYWIRKS+ +V++H+RG+ IP S
Sbjct: 354 QAGNVGVLQGAERFDHTRGYKFSTYVQYWIRKSMSMMVSRHARGVYIPSS 403
>ref|XP_002516489.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
gi|223544309|gb|EEF45830.1| RNA polymerase sigma factor
rpoD, putative [Ricinus communis]
Length = 560
Score = 80.9 bits (198), Expect = 3e-13
Identities = 36/48 (75%), Positives = 44/48 (91%)
Frame = +3
Query: 387 QAGNTGVLQGSELFDHTRGYQFSTYVQYWIRKSILKLVAQHSRGIQIP 530
QAGN GVL+G+E FDHTRGY+FSTYVQYWIRKS+ K+V++ +RGIQIP
Sbjct: 353 QAGNLGVLEGAERFDHTRGYRFSTYVQYWIRKSMSKIVSRLARGIQIP 400
>ref|XP_004291147.1| PREDICTED: RNA polymerase sigma factor sigC-like [Fragaria vesca
subsp. vesca]
Length = 545
Score = 80.5 bits (197), Expect = 4e-13
Identities = 36/48 (75%), Positives = 44/48 (91%)
Frame = +3
Query: 387 QAGNTGVLQGSELFDHTRGYQFSTYVQYWIRKSILKLVAQHSRGIQIP 530
QAGN G+LQG+E FD +RGY+FSTYVQYWIRKS+ +LVAQH+RGI+IP
Sbjct: 337 QAGNLGLLQGAERFDPSRGYRFSTYVQYWIRKSMSRLVAQHARGIKIP 384
>ref|NP_190960.1| RNA polymerase sigma-subunit C [Arabidopsis thaliana]
gi|75098239|sp|O24621.1|SIGC_ARATH RecName: Full=RNA
polymerase sigma factor sigC; Short=Sigma factor C;
Short=Sigma-C; AltName: Full=RNA polymerase sigma factor
sig3; Short=Atsig3; Short=Sigma factor 3; Flags:
Precursor gi|2353175|gb|AAB69386.1| sigma factor 3
[Arabidopsis thaliana] gi|2463554|dbj|BAA22530.1| SigC
[Arabidopsis thaliana] gi|5478585|dbj|BAA82450.1| sigma
factor SigC [Arabidopsis thaliana]
gi|7630012|emb|CAB88354.1| sigma factor SigC
[Arabidopsis thaliana] gi|133778870|gb|ABO38775.1|
At3g53920 [Arabidopsis thaliana]
gi|332645638|gb|AEE79159.1| RNApolymerase sigma-subunit
C [Arabidopsis thaliana]
Length = 571
Score = 79.7 bits (195), Expect = 7e-13
Identities = 35/50 (70%), Positives = 43/50 (86%)
Frame = +3
Query: 387 QAGNTGVLQGSELFDHTRGYQFSTYVQYWIRKSILKLVAQHSRGIQIPVS 536
QAG GVLQG+E FDHTRGY+FSTYVQYWIRKS+ +V++H+RG+ IP S
Sbjct: 363 QAGYVGVLQGAERFDHTRGYKFSTYVQYWIRKSMSTMVSRHARGVHIPSS 412
>dbj|BAA22215.1| plastid RNA polymerase sigma-subunit [Arabidopsis thaliana]
Length = 571
Score = 79.7 bits (195), Expect = 7e-13
Identities = 35/50 (70%), Positives = 43/50 (86%)
Frame = +3
Query: 387 QAGNTGVLQGSELFDHTRGYQFSTYVQYWIRKSILKLVAQHSRGIQIPVS 536
QAG GVLQG+E FDHTRGY+FSTYVQYWIRKS+ +V++H+RG+ IP S
Sbjct: 363 QAGYVGVLQGAERFDHTRGYKFSTYVQYWIRKSMSTMVSRHARGVHIPSS 412
>ref|XP_002877947.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297323785|gb|EFH54206.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 568
Score = 79.7 bits (195), Expect = 7e-13
Identities = 35/50 (70%), Positives = 43/50 (86%)
Frame = +3
Query: 387 QAGNTGVLQGSELFDHTRGYQFSTYVQYWIRKSILKLVAQHSRGIQIPVS 536
QAG GVLQG+E FDHTRGY+FSTYVQYWIRKS+ +V++H+RG+ IP S
Sbjct: 360 QAGYVGVLQGAERFDHTRGYKFSTYVQYWIRKSMSMMVSRHARGVHIPSS 409