BLASTX nr result

ID: Sinomenium21_contig00033445 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00033445
         (764 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006838835.1| hypothetical protein AMTR_s00002p00263570 [A...    75   2e-11
gb|EXB81315.1| hypothetical protein L484_005753 [Morus notabilis]      65   3e-08
ref|XP_007050389.1| Pentatricopeptide repeat-containing protein,...    57   7e-06
ref|XP_004292190.1| PREDICTED: pentatricopeptide repeat-containi...    57   9e-06

>ref|XP_006838835.1| hypothetical protein AMTR_s00002p00263570 [Amborella trichopoda]
           gi|548841341|gb|ERN01404.1| hypothetical protein
           AMTR_s00002p00263570 [Amborella trichopoda]
          Length = 646

 Score = 75.5 bits (184), Expect = 2e-11
 Identities = 36/82 (43%), Positives = 55/82 (67%)
 Frame = -1

Query: 764 QQVIQLLHKMMERGLLPDASTATIIIDFLSKNGQYHESLDLLPTFSPNHKQRGEMMNIES 585
           ++ ++LLHKM ER +LPDASTA+I++D +S+N      + LLP FSP   Q G+ +N+ES
Sbjct: 561 EKALELLHKMAERNVLPDASTASILVDLISENDHCGNFVKLLPRFSPK-SQEGDRLNVES 619

Query: 584 VISCFEDDFAFDQILGKVQHSE 519
           +I+CF   F     + K+Q S+
Sbjct: 620 IIACFSGPFMCSANIHKLQCSD 641


>gb|EXB81315.1| hypothetical protein L484_005753 [Morus notabilis]
          Length = 549

 Score = 65.1 bits (157), Expect = 3e-08
 Identities = 29/60 (48%), Positives = 44/60 (73%)
 Frame = -1

Query: 761 QVIQLLHKMMERGLLPDASTATIIIDFLSKNGQYHESLDLLPTFSPNHKQRGEMMNIESV 582
           +V++LLH+M +R + PDAST +I+ID +SK+ +Y E LDLLPTF    K++ +M   +SV
Sbjct: 489 KVVELLHQMAKRNVQPDASTFSIVIDLVSKDKKYRECLDLLPTFPMQEKEKDDMFTFDSV 548


>ref|XP_007050389.1| Pentatricopeptide repeat-containing protein, putative isoform 1
           [Theobroma cacao] gi|590716300|ref|XP_007050390.1| RTE1
           isoform 1 [Theobroma cacao]
           gi|590716304|ref|XP_007050391.1| Pentatricopeptide
           repeat-containing protein, putative isoform 1 [Theobroma
           cacao] gi|508702650|gb|EOX94546.1| Pentatricopeptide
           repeat-containing protein, putative isoform 1 [Theobroma
           cacao] gi|508702651|gb|EOX94547.1| RTE1 isoform 1
           [Theobroma cacao] gi|508702652|gb|EOX94548.1|
           Pentatricopeptide repeat-containing protein, putative
           isoform 1 [Theobroma cacao]
          Length = 621

 Score = 57.0 bits (136), Expect = 7e-06
 Identities = 25/45 (55%), Positives = 36/45 (80%)
 Frame = -1

Query: 764 QQVIQLLHKMMERGLLPDASTATIIIDFLSKNGQYHESLDLLPTF 630
           Q++++LL KM+E+ L PDAST + ++D LSK+  YHE+L LLPTF
Sbjct: 571 QKMVELLQKMVEKKLSPDASTISAVVDLLSKDEAYHETLKLLPTF 615


>ref|XP_004292190.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 634

 Score = 56.6 bits (135), Expect = 9e-06
 Identities = 26/46 (56%), Positives = 34/46 (73%)
 Frame = -1

Query: 764 QQVIQLLHKMMERGLLPDASTATIIIDFLSKNGQYHESLDLLPTFS 627
           ++V++LLHKM ER L PD ST +I+ID LSK+  Y + LD LP FS
Sbjct: 579 EKVVELLHKMSERNLSPDISTTSIVIDLLSKDESYRKCLDWLPKFS 624


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