BLASTX nr result
ID: Sinomenium21_contig00033383
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00033383
(281 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007032989.1| DNA repair protein xp-C / rad4, putative iso... 90 4e-16
ref|XP_007032988.1| DNA repair protein xp-C / rad4, putative iso... 90 4e-16
ref|XP_006482097.1| PREDICTED: DNA repair protein complementing ... 83 5e-14
ref|XP_006482096.1| PREDICTED: DNA repair protein complementing ... 83 5e-14
ref|XP_002305874.2| hypothetical protein POPTR_0004s08580g [Popu... 79 5e-13
ref|XP_006430573.1| hypothetical protein CICLE_v10010990mg [Citr... 79 7e-13
ref|XP_002531915.1| DNA repair protein xp-C / rad4, putative [Ri... 73 4e-11
ref|XP_004289443.1| PREDICTED: DNA repair protein complementing ... 72 8e-11
gb|EXC20633.1| DNA repair protein complementing XP-C cell [Morus... 72 1e-10
emb|CBI33509.3| unnamed protein product [Vitis vinifera] 70 2e-10
ref|XP_002275277.1| PREDICTED: DNA repair protein complementing ... 70 2e-10
ref|XP_006596501.1| PREDICTED: DNA repair protein complementing ... 70 3e-10
ref|XP_007141874.1| hypothetical protein PHAVU_008G2331001g, par... 70 3e-10
ref|XP_003544368.1| PREDICTED: DNA repair protein complementing ... 70 3e-10
ref|XP_003616296.1| DNA repair protein complementing XP-C cells-... 70 3e-10
gb|EYU30903.1| hypothetical protein MIMGU_mgv1a002008mg [Mimulus... 70 4e-10
ref|XP_007217691.1| hypothetical protein PRUPE_ppa001034mg [Prun... 69 9e-10
ref|XP_006364632.1| PREDICTED: DNA repair protein complementing ... 67 2e-09
ref|XP_006364631.1| PREDICTED: DNA repair protein complementing ... 67 2e-09
ref|XP_004250530.1| PREDICTED: DNA repair protein complementing ... 67 2e-09
>ref|XP_007032989.1| DNA repair protein xp-C / rad4, putative isoform 2 [Theobroma
cacao] gi|508712018|gb|EOY03915.1| DNA repair protein
xp-C / rad4, putative isoform 2 [Theobroma cacao]
Length = 908
Score = 89.7 bits (221), Expect = 4e-16
Identities = 51/92 (55%), Positives = 65/92 (70%), Gaps = 4/92 (4%)
Frame = +2
Query: 2 RYCMKWYKIASKRVNSHWWDAVLAPLKELESGATGVMVDLNVHHPEHASNKLEE-KASMI 178
RYCMKWYKIA KRVNS WWDAVLAPL+ELESGATG +++ H +ASN+ E+ KAS +
Sbjct: 466 RYCMKWYKIAPKRVNSIWWDAVLAPLRELESGATGGTINMEKLH-NNASNEQEKIKASGM 524
Query: 179 S---GSVDTSVNEIVEGSSAQESVKRHGSPTE 265
S G+ S + I+ S QE+ K +GS +E
Sbjct: 525 SEYPGTDSPSNHVILPEKSGQEAFKEYGSKSE 556
>ref|XP_007032988.1| DNA repair protein xp-C / rad4, putative isoform 1 [Theobroma
cacao] gi|508712017|gb|EOY03914.1| DNA repair protein
xp-C / rad4, putative isoform 1 [Theobroma cacao]
Length = 974
Score = 89.7 bits (221), Expect = 4e-16
Identities = 51/92 (55%), Positives = 65/92 (70%), Gaps = 4/92 (4%)
Frame = +2
Query: 2 RYCMKWYKIASKRVNSHWWDAVLAPLKELESGATGVMVDLNVHHPEHASNKLEE-KASMI 178
RYCMKWYKIA KRVNS WWDAVLAPL+ELESGATG +++ H +ASN+ E+ KAS +
Sbjct: 532 RYCMKWYKIAPKRVNSIWWDAVLAPLRELESGATGGTINMEKLH-NNASNEQEKIKASGM 590
Query: 179 S---GSVDTSVNEIVEGSSAQESVKRHGSPTE 265
S G+ S + I+ S QE+ K +GS +E
Sbjct: 591 SEYPGTDSPSNHVILPEKSGQEAFKEYGSKSE 622
>ref|XP_006482097.1| PREDICTED: DNA repair protein complementing XP-C cells homolog
isoform X2 [Citrus sinensis]
Length = 954
Score = 82.8 bits (203), Expect = 5e-14
Identities = 39/53 (73%), Positives = 44/53 (83%)
Frame = +2
Query: 2 RYCMKWYKIASKRVNSHWWDAVLAPLKELESGATGVMVDLNVHHPEHASNKLE 160
RYCMKWY+IASKRVNS WWDAVLAPL+ELESGATG M + + H +ASN LE
Sbjct: 526 RYCMKWYRIASKRVNSAWWDAVLAPLRELESGATGGMTQMEMRH-VNASNTLE 577
>ref|XP_006482096.1| PREDICTED: DNA repair protein complementing XP-C cells homolog
isoform X1 [Citrus sinensis]
Length = 974
Score = 82.8 bits (203), Expect = 5e-14
Identities = 39/53 (73%), Positives = 44/53 (83%)
Frame = +2
Query: 2 RYCMKWYKIASKRVNSHWWDAVLAPLKELESGATGVMVDLNVHHPEHASNKLE 160
RYCMKWY+IASKRVNS WWDAVLAPL+ELESGATG M + + H +ASN LE
Sbjct: 546 RYCMKWYRIASKRVNSAWWDAVLAPLRELESGATGGMTQMEMRH-VNASNTLE 597
>ref|XP_002305874.2| hypothetical protein POPTR_0004s08580g [Populus trichocarpa]
gi|550340612|gb|EEE86385.2| hypothetical protein
POPTR_0004s08580g [Populus trichocarpa]
Length = 898
Score = 79.3 bits (194), Expect = 5e-13
Identities = 39/53 (73%), Positives = 43/53 (81%)
Frame = +2
Query: 2 RYCMKWYKIASKRVNSHWWDAVLAPLKELESGATGVMVDLNVHHPEHASNKLE 160
RYCMKWYKIAS+RVNS WWDAVLAPL+ELESGATG M L H + ASN+ E
Sbjct: 500 RYCMKWYKIASQRVNSLWWDAVLAPLRELESGATGGMAHLEKPHAD-ASNEHE 551
>ref|XP_006430573.1| hypothetical protein CICLE_v10010990mg [Citrus clementina]
gi|557532630|gb|ESR43813.1| hypothetical protein
CICLE_v10010990mg [Citrus clementina]
Length = 974
Score = 79.0 bits (193), Expect = 7e-13
Identities = 38/53 (71%), Positives = 42/53 (79%)
Frame = +2
Query: 2 RYCMKWYKIASKRVNSHWWDAVLAPLKELESGATGVMVDLNVHHPEHASNKLE 160
RYCMKWY+IA KRVNS WWDAVLAPL+ELESGATG M + H +ASN LE
Sbjct: 546 RYCMKWYRIAPKRVNSAWWDAVLAPLRELESGATGGMTQMEKRH-VNASNILE 597
>ref|XP_002531915.1| DNA repair protein xp-C / rad4, putative [Ricinus communis]
gi|223528425|gb|EEF30459.1| DNA repair protein xp-C /
rad4, putative [Ricinus communis]
Length = 683
Score = 73.2 bits (178), Expect = 4e-11
Identities = 31/35 (88%), Positives = 34/35 (97%)
Frame = +2
Query: 2 RYCMKWYKIASKRVNSHWWDAVLAPLKELESGATG 106
RYCMKWYKIAS+R+NS WWDAVLAPL+ELESGATG
Sbjct: 396 RYCMKWYKIASQRINSIWWDAVLAPLRELESGATG 430
>ref|XP_004289443.1| PREDICTED: DNA repair protein complementing XP-C cells homolog
[Fragaria vesca subsp. vesca]
Length = 919
Score = 72.0 bits (175), Expect = 8e-11
Identities = 40/88 (45%), Positives = 51/88 (57%), Gaps = 4/88 (4%)
Frame = +2
Query: 2 RYCMKWYKIASKRVNSHWWDAVLAPLKELESGATGVMVDLNVHHPEHASNKLEEKASMIS 181
RYC+KWY+IAS+RV+ WWD VLAPL++LE ATG MV L H +S + E IS
Sbjct: 483 RYCLKWYQIASQRVDPIWWDQVLAPLRDLEVRATGGMVFLEKEHTGSSSEHIIENFLNIS 542
Query: 182 GSVDTSV----NEIVEGSSAQESVKRHG 253
GS + S N + S+ E K G
Sbjct: 543 GSAEMSTPVPSNVHLNAKSSLEGSKDSG 570
>gb|EXC20633.1| DNA repair protein complementing XP-C cell [Morus notabilis]
Length = 962
Score = 71.6 bits (174), Expect = 1e-10
Identities = 36/62 (58%), Positives = 43/62 (69%), Gaps = 9/62 (14%)
Frame = +2
Query: 2 RYCMKWYKIASKRVNSHWWDAVLAPLKELESGATGVM-------VDLNVHH--PEHASNK 154
RYCMKWYKIASKRVNS WWD+VLAPLKE+ES AT M +D + H P+H +
Sbjct: 521 RYCMKWYKIASKRVNSIWWDSVLAPLKEIESRATNGMFHLENDNIDASFKHDNPKHIAEN 580
Query: 155 LE 160
L+
Sbjct: 581 LK 582
>emb|CBI33509.3| unnamed protein product [Vitis vinifera]
Length = 866
Score = 70.5 bits (171), Expect = 2e-10
Identities = 29/35 (82%), Positives = 33/35 (94%)
Frame = +2
Query: 2 RYCMKWYKIASKRVNSHWWDAVLAPLKELESGATG 106
RYCMKWY+IAS+R+NS WWDAVLAPLKELE+GA G
Sbjct: 459 RYCMKWYRIASQRINSAWWDAVLAPLKELEAGAVG 493
>ref|XP_002275277.1| PREDICTED: DNA repair protein complementing XP-C cells-like [Vitis
vinifera]
Length = 1103
Score = 70.5 bits (171), Expect = 2e-10
Identities = 29/35 (82%), Positives = 33/35 (94%)
Frame = +2
Query: 2 RYCMKWYKIASKRVNSHWWDAVLAPLKELESGATG 106
RYCMKWY+IAS+R+NS WWDAVLAPLKELE+GA G
Sbjct: 705 RYCMKWYRIASQRINSAWWDAVLAPLKELEAGAVG 739
>ref|XP_006596501.1| PREDICTED: DNA repair protein complementing XP-C cells homolog
isoform X2 [Glycine max]
Length = 915
Score = 70.1 bits (170), Expect = 3e-10
Identities = 31/64 (48%), Positives = 41/64 (64%)
Frame = +2
Query: 2 RYCMKWYKIASKRVNSHWWDAVLAPLKELESGATGVMVDLNVHHPEHASNKLEEKASMIS 181
RYCMKWYKIAS RVNS WWD+VL PL++LESGATG + L + + + +
Sbjct: 515 RYCMKWYKIASHRVNSTWWDSVLKPLRDLESGATGGVAHLGTNQIISTESNMNDSVVPTR 574
Query: 182 GSVD 193
S++
Sbjct: 575 SSIE 578
>ref|XP_007141874.1| hypothetical protein PHAVU_008G2331001g, partial [Phaseolus
vulgaris] gi|561015007|gb|ESW13868.1| hypothetical
protein PHAVU_008G2331001g, partial [Phaseolus vulgaris]
Length = 646
Score = 70.1 bits (170), Expect = 3e-10
Identities = 30/35 (85%), Positives = 32/35 (91%)
Frame = +2
Query: 2 RYCMKWYKIASKRVNSHWWDAVLAPLKELESGATG 106
RYCMKWYKIAS RVNS WWD VLAPL++LESGATG
Sbjct: 248 RYCMKWYKIASHRVNSTWWDLVLAPLRDLESGATG 282
>ref|XP_003544368.1| PREDICTED: DNA repair protein complementing XP-C cells homolog
isoform X1 [Glycine max]
Length = 926
Score = 70.1 bits (170), Expect = 3e-10
Identities = 31/64 (48%), Positives = 41/64 (64%)
Frame = +2
Query: 2 RYCMKWYKIASKRVNSHWWDAVLAPLKELESGATGVMVDLNVHHPEHASNKLEEKASMIS 181
RYCMKWYKIAS RVNS WWD+VL PL++LESGATG + L + + + +
Sbjct: 526 RYCMKWYKIASHRVNSTWWDSVLKPLRDLESGATGGVAHLGTNQIISTESNMNDSVVPTR 585
Query: 182 GSVD 193
S++
Sbjct: 586 SSIE 589
>ref|XP_003616296.1| DNA repair protein complementing XP-C cells-like protein [Medicago
truncatula] gi|355517631|gb|AES99254.1| DNA repair
protein complementing XP-C cells-like protein [Medicago
truncatula]
Length = 1052
Score = 70.1 bits (170), Expect = 3e-10
Identities = 30/38 (78%), Positives = 35/38 (92%)
Frame = +2
Query: 2 RYCMKWYKIASKRVNSHWWDAVLAPLKELESGATGVMV 115
RYCMKWYKIAS+RVNS WW++VLAPL+ LESGATG +V
Sbjct: 652 RYCMKWYKIASQRVNSTWWESVLAPLRNLESGATGGVV 689
>gb|EYU30903.1| hypothetical protein MIMGU_mgv1a002008mg [Mimulus guttatus]
Length = 727
Score = 69.7 bits (169), Expect = 4e-10
Identities = 30/40 (75%), Positives = 32/40 (80%)
Frame = +2
Query: 2 RYCMKWYKIASKRVNSHWWDAVLAPLKELESGATGVMVDL 121
RYC KWYK+AS R+NS WWDAVLAPLKELESGA G L
Sbjct: 430 RYCTKWYKVASSRINSIWWDAVLAPLKELESGANGARSSL 469
>ref|XP_007217691.1| hypothetical protein PRUPE_ppa001034mg [Prunus persica]
gi|462413841|gb|EMJ18890.1| hypothetical protein
PRUPE_ppa001034mg [Prunus persica]
Length = 927
Score = 68.6 bits (166), Expect = 9e-10
Identities = 36/93 (38%), Positives = 48/93 (51%)
Frame = +2
Query: 2 RYCMKWYKIASKRVNSHWWDAVLAPLKELESGATGVMVDLNVHHPEHASNKLEEKASMIS 181
RYC+KWY+IAS+RVNS WWDAVLAPL++ E AT V L H +S + K+ IS
Sbjct: 522 RYCLKWYQIASQRVNSIWWDAVLAPLRDFEVTATSGSVHLEKEHTGSSSGHEQAKSLNIS 581
Query: 182 GSVDTSVNEIVEGSSAQESVKRHGSPTEKLEVK 280
+ +E + PT + K
Sbjct: 582 DRAVIATRNSLEDMELETKALTEPLPTNQQAYK 614
>ref|XP_006364632.1| PREDICTED: DNA repair protein complementing XP-C cells homolog
isoform X2 [Solanum tuberosum]
Length = 903
Score = 67.4 bits (163), Expect = 2e-09
Identities = 31/38 (81%), Positives = 33/38 (86%)
Frame = +2
Query: 2 RYCMKWYKIASKRVNSHWWDAVLAPLKELESGATGVMV 115
RYC KWYKIAS+RVNS WWDAVLAPLKELES AT +V
Sbjct: 522 RYCTKWYKIASERVNSIWWDAVLAPLKELESVATSDVV 559
>ref|XP_006364631.1| PREDICTED: DNA repair protein complementing XP-C cells homolog
isoform X1 [Solanum tuberosum]
Length = 928
Score = 67.4 bits (163), Expect = 2e-09
Identities = 31/38 (81%), Positives = 33/38 (86%)
Frame = +2
Query: 2 RYCMKWYKIASKRVNSHWWDAVLAPLKELESGATGVMV 115
RYC KWYKIAS+RVNS WWDAVLAPLKELES AT +V
Sbjct: 547 RYCTKWYKIASERVNSIWWDAVLAPLKELESVATSDVV 584
>ref|XP_004250530.1| PREDICTED: DNA repair protein complementing XP-C cells-like
[Solanum lycopersicum]
Length = 928
Score = 67.4 bits (163), Expect = 2e-09
Identities = 31/38 (81%), Positives = 33/38 (86%)
Frame = +2
Query: 2 RYCMKWYKIASKRVNSHWWDAVLAPLKELESGATGVMV 115
RYC KWYKIAS+RVNS WWDAVLAPLKELES AT +V
Sbjct: 547 RYCTKWYKIASERVNSIWWDAVLAPLKELESVATSDVV 584