BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00033337
         (1467 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007199641.1| hypothetical protein PRUPE_ppa021613mg [Prun...   602   e-169
ref|XP_007042573.1| Pentatricopeptide repeat-containing protein ...   593   e-167
ref|XP_003535694.1| PREDICTED: pentatricopeptide repeat-containi...   566   e-159
ref|XP_007143083.1| hypothetical protein PHAVU_007G042100g [Phas...   565   e-158
ref|XP_004514248.1| PREDICTED: pentatricopeptide repeat-containi...   563   e-158
ref|XP_004243818.1| PREDICTED: putative pentatricopeptide repeat...   552   e-154
ref|XP_006348971.1| PREDICTED: putative pentatricopeptide repeat...   551   e-154
ref|XP_002269319.2| PREDICTED: pentatricopeptide repeat-containi...   484   e-134
ref|XP_004309732.1| PREDICTED: pentatricopeptide repeat-containi...   473   e-130
gb|EPS71925.1| hypothetical protein M569_02834, partial [Genlise...   466   e-129
gb|EYU37608.1| hypothetical protein MIMGU_mgv1a006142mg [Mimulus...   449   e-123
ref|XP_002518643.1| pentatricopeptide repeat-containing protein,...   377   e-102
ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat...   362   2e-97
ref|XP_004246883.1| PREDICTED: putative pentatricopeptide repeat...   361   5e-97
ref|XP_006341113.1| PREDICTED: putative pentatricopeptide repeat...   359   2e-96
ref|XP_007203957.1| hypothetical protein PRUPE_ppa022872mg [Prun...   356   1e-95
ref|XP_006429514.1| hypothetical protein CICLE_v10011209mg [Citr...   355   2e-95
ref|XP_002323645.2| pentatricopeptide repeat-containing family p...   354   5e-95
ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containi...   354   5e-95
gb|AEP33758.1| organelle transcript processing 82, partial [Barb...   353   1e-94

>ref|XP_007199641.1| hypothetical protein PRUPE_ppa021613mg [Prunus persica]
            gi|462395041|gb|EMJ00840.1| hypothetical protein
            PRUPE_ppa021613mg [Prunus persica]
          Length = 643

 Score =  602 bits (1551), Expect = e-169
 Identities = 296/489 (60%), Positives = 376/489 (76%)
 Frame = +1

Query: 1    LFQPNIFPFNALIRVLSNNLLSFHAFSVFKTLKSRSLSPNDLTFSFFLKACFGFKDARNV 180
            L +PNIFPFNA+IRV +   L   AFS+FK+LK  SLSPND TFSF LKACF  +++R V
Sbjct: 105  LQKPNIFPFNAIIRVFAEEGLFSDAFSLFKSLKQTSLSPNDFTFSFLLKACFRSQNSRYV 164

Query: 181  QQVHTHVVKSGFDGNSSVCNGLLSVYAKGVRDFKSAHKVFDDMPQRGMAFCWTCMIAGYA 360
            +Q+HTHV+K GF  NS VC  LL+VYAKG++D  SA  VFD+MP++ +  CWT +IAGYA
Sbjct: 165  KQIHTHVMKMGFLCNSFVCASLLAVYAKGLKDLGSARLVFDEMPEKSIVCCWTSLIAGYA 224

Query: 361  QVGLSNEALNLFVRMIEENLVPRDDTMVSVLSACSSLQIGEIERWERVLIEFGGPPDCGV 540
              G S + L LF+ M++ENL P DDTMVSVLSACS+L I +IE+W  +L +     D   
Sbjct: 225  LSGQSEQVLRLFLMMVDENLRPEDDTMVSVLSACSNLDIVDIEKWVTILSKVVSNVDAKK 284

Query: 541  EGSSNEKIITVLIYLYGKLGKIEKSRELFDRIVANGGKSLLHWNAMIGGYVQNGLPIEAL 720
             G   + + T L+YLYGK GK+EKSR+ FD+I  NG +S+L WNAMIG +VQNG P+E+L
Sbjct: 285  FGC--DSVNTALVYLYGKWGKVEKSRDRFDQISDNGKQSVLPWNAMIGAFVQNGFPMESL 342

Query: 721  NVFQLMVAIQASRPNHVTMVSVLSACAQVGNLELGRWVHGYLKSAGSEGVLESNTFLATA 900
            ++F++MV     RPNHVTMVSVLSACAQ+G+L+LGRWVH YLKS GS+GV+ SN  LATA
Sbjct: 343  SLFRVMVEDPKYRPNHVTMVSVLSACAQIGDLDLGRWVHEYLKSKGSKGVIGSNRILATA 402

Query: 901  FIDMYSKCGSMDMAKEVFDQMVFKDVVSFNAMIMGLAMNGEGEQALMVFSKMEELGVHPN 1080
             IDMYSKCGS++ AKEVFDQMV KD+VSFNAMIMGLA+N EGE+AL +FS+++E G+ PN
Sbjct: 403  LIDMYSKCGSLERAKEVFDQMVSKDIVSFNAMIMGLAVNSEGEEALRLFSRIQEFGLQPN 462

Query: 1081 GGTFLGVLSACNHSGMVGEGRRIFLSMFPSYSIIPELEHYACYVDLLSRVGHIEEALKVV 1260
             GTFLG L AC+HSG+  EGR+IF  M  S+S+  +LEHYACYVDLL+RVG +EEAL+VV
Sbjct: 463  AGTFLGALCACSHSGLSEEGRQIFNDMTSSFSVSSKLEHYACYVDLLARVGLVEEALEVV 522

Query: 1261 KSMPVAPNGLIWGALLGGCIAHSRVDIAQDVASELVEVDPSNPAGYVMLSNVYATDNRWR 1440
             SMP  PN  +WGALLGGC+ HSRVD+AQ V+++LV  DP N  GY+ML+N +A+D RW 
Sbjct: 523  TSMPFEPNSFVWGALLGGCLLHSRVDLAQYVSNKLVRSDPDNSGGYIMLANAFASDRRWG 582

Query: 1441 EILELRGLM 1467
            ++  LR +M
Sbjct: 583  DVSALRWVM 591


>ref|XP_007042573.1| Pentatricopeptide repeat-containing protein [Theobroma cacao]
            gi|508706508|gb|EOX98404.1| Pentatricopeptide
            repeat-containing protein [Theobroma cacao]
          Length = 647

 Score =  593 bits (1530), Expect = e-167
 Identities = 297/489 (60%), Positives = 367/489 (75%)
 Frame = +1

Query: 1    LFQPNIFPFNALIRVLSNNLLSFHAFSVFKTLKSRSLSPNDLTFSFFLKACFGFKDARNV 180
            L  PNIFPFNA+IRVL+ N L F A S F  L  RSLSPNDLTFSF LKACF   DA+ V
Sbjct: 109  LHNPNIFPFNAIIRVLAENGLFFLACSFFNNLIQRSLSPNDLTFSFLLKACFLSNDAQYV 168

Query: 181  QQVHTHVVKSGFDGNSSVCNGLLSVYAKGVRDFKSAHKVFDDMPQRGMAFCWTCMIAGYA 360
             Q+HT+++K G+  + +VCNGLLSVYA+G +D  SAHK+FD+MP++     WT +IA YA
Sbjct: 169  NQIHTYIIKLGYLCDPTVCNGLLSVYAQGFKDVASAHKLFDEMPEKVSVTPWTNLIACYA 228

Query: 361  QVGLSNEALNLFVRMIEENLVPRDDTMVSVLSACSSLQIGEIERWERVLIEFGGPPDCGV 540
            + G + E L LF  MIE+NL P +DTMVSVLSACSS +I +IE+W  +L E     D  +
Sbjct: 229  RSGRNEEVLRLFCSMIEKNLRPENDTMVSVLSACSSAEIFDIEKWVTILSEIIHNSDNKI 288

Query: 541  EGSSNEKIITVLIYLYGKLGKIEKSRELFDRIVANGGKSLLHWNAMIGGYVQNGLPIEAL 720
                +  I   LIYLYG+L  +EKSRE F+ I A G  S++ WNAMIG YVQNG P+EAL
Sbjct: 289  PNRDSVNI--ALIYLYGRLENVEKSRERFNEIYAIGKMSVIPWNAMIGAYVQNGCPMEAL 346

Query: 721  NVFQLMVAIQASRPNHVTMVSVLSACAQVGNLELGRWVHGYLKSAGSEGVLESNTFLATA 900
            ++F LM+     RPNHVTMVSVLSACAQ+G+L+LG+WVH YL+  G +GVLE+NTFLATA
Sbjct: 347  SLFHLMMEDSNCRPNHVTMVSVLSACAQMGDLDLGKWVHQYLEYNGRKGVLETNTFLATA 406

Query: 901  FIDMYSKCGSMDMAKEVFDQMVFKDVVSFNAMIMGLAMNGEGEQALMVFSKMEELGVHPN 1080
             IDMYSKCG ++MAK VFDQM+ KDVVSFNAMIMGLAMNGEGE+A+ + SK++ELG+HPN
Sbjct: 407  LIDMYSKCGDLEMAKRVFDQMISKDVVSFNAMIMGLAMNGEGEEAVSLLSKVQELGLHPN 466

Query: 1081 GGTFLGVLSACNHSGMVGEGRRIFLSMFPSYSIIPELEHYACYVDLLSRVGHIEEALKVV 1260
             GTFLG+L AC+HSG+  EGR+IFL M   +S+ P LEHYACY+D+L+RVG +E AL VV
Sbjct: 467  AGTFLGLLCACSHSGLSEEGRQIFLEMNSRFSVYPRLEHYACYIDILARVGLVEAALTVV 526

Query: 1261 KSMPVAPNGLIWGALLGGCIAHSRVDIAQDVASELVEVDPSNPAGYVMLSNVYATDNRWR 1440
             SMP  PN  +WGALLGGC+ HSR D+AQ V  +LVEVDP N  GYVML+N  A D+RW 
Sbjct: 527  DSMPYEPNNFVWGALLGGCVLHSRADLAQKVYKKLVEVDPQNSGGYVMLANTLAVDHRWN 586

Query: 1441 EILELRGLM 1467
            ++  LR LM
Sbjct: 587  DVSVLRWLM 595


>ref|XP_003535694.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like
            [Glycine max]
          Length = 634

 Score =  567 bits (1460), Expect = e-159
 Identities = 281/486 (57%), Positives = 356/486 (73%)
 Frame = +1

Query: 1    LFQPNIFPFNALIRVLSNNLLSFHAFSVFKTLKSRSLSPNDLTFSFFLKACFGFKDARNV 180
            L  PNIFPFNA+IRVL+ +   FHA SVF  LK RSLSPNDLTFSF  K CF  KD R V
Sbjct: 90   LQNPNIFPFNAIIRVLAQDGHFFHALSVFNYLKRRSLSPNDLTFSFLFKPCFRTKDVRYV 149

Query: 181  QQVHTHVVKSGFDGNSSVCNGLLSVYAKGVRDFKSAHKVFDDMPQRGMAFCWTCMIAGYA 360
            +Q+H H+ K GF  +  VCNGL+SVYAKG     SA KVFD++P + +  CWT +I G+A
Sbjct: 150  EQIHAHIQKIGFLSDPFVCNGLVSVYAKGFNSLVSARKVFDEIPDKMLVSCWTNLITGFA 209

Query: 361  QVGLSNEALNLFVRMIEENLVPRDDTMVSVLSACSSLQIGEIERWERVLIEFGGPPDCGV 540
            Q G S E L LF  M+ +NL+P+ DTMVSVLSACSSL++ +IE+W  V +E  G      
Sbjct: 210  QSGHSEEVLQLFQVMVRQNLLPQSDTMVSVLSACSSLEMPKIEKWVNVFLELVGD-GVST 268

Query: 541  EGSSNEKIITVLIYLYGKLGKIEKSRELFDRIVANGGKSLLHWNAMIGGYVQNGLPIEAL 720
              + ++ + TVL+YL+GK G+IEKSRE FDRI  +G  S++ WNAMI  YVQNG P+E L
Sbjct: 269  RETCHDSVNTVLVYLFGKWGRIEKSRENFDRISTSGKSSVVPWNAMINAYVQNGCPVEGL 328

Query: 721  NVFQLMVAIQASRPNHVTMVSVLSACAQVGNLELGRWVHGYLKSAGSEGVLESNTFLATA 900
            N+F++MV  + +RPNH+TMVSVLSACAQ+G+L  G WVHGYL S G    + SN  LAT+
Sbjct: 329  NLFRMMVEEETTRPNHITMVSVLSACAQIGDLSFGSWVHGYLISLGHRHTIGSNQILATS 388

Query: 901  FIDMYSKCGSMDMAKEVFDQMVFKDVVSFNAMIMGLAMNGEGEQALMVFSKMEELGVHPN 1080
             IDMYSKCG++D AK+VF+  V KDVV FNAMIMGLA+ G+GE AL +F K+ E G+ PN
Sbjct: 389  LIDMYSKCGNLDKAKKVFEHTVSKDVVLFNAMIMGLAVYGKGEDALRLFYKIPEFGLQPN 448

Query: 1081 GGTFLGVLSACNHSGMVGEGRRIFLSMFPSYSIIPELEHYACYVDLLSRVGHIEEALKVV 1260
             GTFLG LSAC+HSG++  GR+IF  +  S ++   LEH ACY+DLL+RVG IEEA++VV
Sbjct: 449  AGTFLGALSACSHSGLLVRGRQIFRELTLSTTL--TLEHCACYIDLLARVGCIEEAIEVV 506

Query: 1261 KSMPVAPNGLIWGALLGGCIAHSRVDIAQDVASELVEVDPSNPAGYVMLSNVYATDNRWR 1440
             SMP  PN  +WGALLGGC+ HSRV++AQ+V+  LVEVDP N AGYVML+N  A+DN+W 
Sbjct: 507  TSMPFKPNNFVWGALLGGCLLHSRVELAQEVSRRLVEVDPDNSAGYVMLANALASDNQWS 566

Query: 1441 EILELR 1458
            ++  LR
Sbjct: 567  DVSGLR 572


>ref|XP_007143083.1| hypothetical protein PHAVU_007G042100g [Phaseolus vulgaris]
            gi|561016273|gb|ESW15077.1| hypothetical protein
            PHAVU_007G042100g [Phaseolus vulgaris]
          Length = 632

 Score =  565 bits (1456), Expect = e-158
 Identities = 286/488 (58%), Positives = 358/488 (73%), Gaps = 2/488 (0%)
 Frame = +1

Query: 1    LFQPNIFPFNALIRVLSNNLLSFHAFSVFKTLKSRSLSPNDLTFSFFLKACFGFKDARNV 180
            L  PNIFPFNA+IRVLS     FHAFSVF  LK R LSPNDLTFSF LKACF  KD R V
Sbjct: 88   LQNPNIFPFNAIIRVLSQEGHFFHAFSVFNDLKRRPLSPNDLTFSFLLKACFRSKDPRYV 147

Query: 181  QQVHTHVVKSGFDGNSSVCNGLLSVYAKGVRDFKSAHKVFDDMPQRGMAFCWTCMIAGYA 360
            +Q+H H+ K G   +SSVCNGL+SVYAKG     SA KVFD++P + +  CWT +I G+A
Sbjct: 148  KQIHAHIQKMGLLSDSSVCNGLVSVYAKGHNHLASARKVFDEIPDKRVVSCWTSLITGFA 207

Query: 361  QVGLSNEALNLFVRMIEENLVPRDDTMVSVLSACSSLQIGEIERWERVLIEFGGPPDCGV 540
              G S EAL LF  M+ +NL+P+ DTMVSVLSACSSL++ +IE+W  +L E     D GV
Sbjct: 208  HSGQSEEALQLFHVMVGQNLLPQSDTMVSVLSACSSLEMPKIEKWINILSEL---IDDGV 264

Query: 541  EGSSN--EKIITVLIYLYGKLGKIEKSRELFDRIVANGGKSLLHWNAMIGGYVQNGLPIE 714
                   + + T L+YL+GK GK+EKSRE FDRI A G +S++ WNAMI  YV+NG P+E
Sbjct: 265  STRETYCDSVNTALVYLFGKWGKVEKSREGFDRISAIGKRSVIPWNAMISTYVRNGYPVE 324

Query: 715  ALNVFQLMVAIQASRPNHVTMVSVLSACAQVGNLELGRWVHGYLKSAGSEGVLESNTFLA 894
             L++F++MV   A+ PNH+TMVSVLSACAQ+G+L  G WVH +L S G +  + SN  LA
Sbjct: 325  GLSLFRVMVEELATTPNHITMVSVLSACAQIGDLSFGSWVHDHLISLGHKDTIASNQILA 384

Query: 895  TAFIDMYSKCGSMDMAKEVFDQMVFKDVVSFNAMIMGLAMNGEGEQALMVFSKMEELGVH 1074
            T+ IDMYSKCG++D AKEVF+  V KDVV FNAMIMGLA++GEGE AL +F +M E G+ 
Sbjct: 385  TSLIDMYSKCGNLDKAKEVFEHTVSKDVVLFNAMIMGLAVSGEGEDALRLFYRMPEFGLQ 444

Query: 1075 PNGGTFLGVLSACNHSGMVGEGRRIFLSMFPSYSIIPELEHYACYVDLLSRVGHIEEALK 1254
            PN GTFLG LSAC+HSG++  GR+IF  +  S+S    LEH ACY+DLL+RVG IEEA+K
Sbjct: 445  PNAGTFLGALSACSHSGLLARGRQIFREV--SFSPTLTLEHCACYIDLLARVGCIEEAMK 502

Query: 1255 VVKSMPVAPNGLIWGALLGGCIAHSRVDIAQDVASELVEVDPSNPAGYVMLSNVYATDNR 1434
             V SMP  PN  +WGALLGGC+ HSRV++AQ+V+  LVEVDP N AGYVML+N  A++N+
Sbjct: 503  FVISMPFKPNNFVWGALLGGCLLHSRVELAQEVSRRLVEVDPDNSAGYVMLANALASENQ 562

Query: 1435 WREILELR 1458
            W ++ ELR
Sbjct: 563  WSDVSELR 570


>ref|XP_004514248.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
            mitochondrial-like [Cicer arietinum]
          Length = 1334

 Score =  563 bits (1452), Expect = e-158
 Identities = 279/486 (57%), Positives = 359/486 (73%)
 Frame = +1

Query: 1    LFQPNIFPFNALIRVLSNNLLSFHAFSVFKTLKSRSLSPNDLTFSFFLKACFGFKDARNV 180
            L  PNIFPFNA+IR+L+     FH FS+F  LK RSL PNDLT SF LKACF  KD   V
Sbjct: 790  LQNPNIFPFNAIIRILAEQGHFFHVFSLFNCLKRRSLFPNDLTLSFLLKACFKSKDTHCV 849

Query: 181  QQVHTHVVKSGFDGNSSVCNGLLSVYAKGVRDFKSAHKVFDDMPQRGMAFCWTCMIAGYA 360
            +QVH H++K G+  ++ V NGL++VYAKG  +  SA KVFD++P +    CWT +I GYA
Sbjct: 850  EQVHAHILKMGYLSDTFVTNGLVAVYAKGFNNLVSARKVFDEIPDKSAVSCWTSLITGYA 909

Query: 361  QVGLSNEALNLFVRMIEENLVPRDDTMVSVLSACSSLQIGEIERWERVLIEFGGPPDCGV 540
            Q G S E L +F  MI +N+ P++DTMVSVLSACSSLQI +IE+W  +L E         
Sbjct: 910  QSGQSEEVLQVFHAMIRQNMCPQNDTMVSVLSACSSLQIPKIEKWVYILSELIDDSISAR 969

Query: 541  EGSSNEKIITVLIYLYGKLGKIEKSRELFDRIVANGGKSLLHWNAMIGGYVQNGLPIEAL 720
            E + ++ + TVL++L+GK G +EKSRE F++I A G + ++ WNAMI  YVQNG P+E L
Sbjct: 970  E-TWHDSVNTVLVFLFGKWGNVEKSREKFEQISAAGKRGVVPWNAMISAYVQNGCPLEGL 1028

Query: 721  NVFQLMVAIQASRPNHVTMVSVLSACAQVGNLELGRWVHGYLKSAGSEGVLESNTFLATA 900
            N+F+ MV  Q SRPNH+TMVSVLSACAQ+G+L LG WVH YL S G +G + SN  LAT+
Sbjct: 1029 NLFRAMVEEQTSRPNHITMVSVLSACAQIGDLSLGCWVHEYLISIGHKGTIGSNQILATS 1088

Query: 901  FIDMYSKCGSMDMAKEVFDQMVFKDVVSFNAMIMGLAMNGEGEQALMVFSKMEELGVHPN 1080
             IDMYSKCGS+D AKEVF+  + KDVV FNAMIMGLA+NGEGE AL +F KM E G+ PN
Sbjct: 1089 LIDMYSKCGSLDRAKEVFEHAISKDVVLFNAMIMGLAVNGEGEDALRLFYKMTEYGLQPN 1148

Query: 1081 GGTFLGVLSACNHSGMVGEGRRIFLSMFPSYSIIPELEHYACYVDLLSRVGHIEEALKVV 1260
             GTFLG LSAC+HSG++ +GR++F  +  S S   +LEHYACY+DLL+RVG IEEA++VV
Sbjct: 1149 AGTFLGALSACSHSGLLEKGRQMFRDV--SLSAYLKLEHYACYIDLLARVGCIEEAIEVV 1206

Query: 1261 KSMPVAPNGLIWGALLGGCIAHSRVDIAQDVASELVEVDPSNPAGYVMLSNVYATDNRWR 1440
             SMP  PN  +WGALLGGC+ HSRV++AQ+V+  LV++DP+N AGYVML+N  A+D++W 
Sbjct: 1207 ISMPFEPNNFVWGALLGGCLLHSRVELAQEVSKRLVQIDPNNSAGYVMLANALASDSQWS 1266

Query: 1441 EILELR 1458
            ++  LR
Sbjct: 1267 DVSALR 1272



 Score =  272 bits (696), Expect = 2e-70
 Identities = 167/493 (33%), Positives = 266/493 (53%), Gaps = 10/493 (2%)
 Frame = +1

Query: 16   IFPFNALIRVLSNNLLSFHAFSVFKTLKSRSLSPNDLTFSFFLKACFGFKDARNVQQVHT 195
            I  + ++I     N  +     +F  ++   +  N  T    + AC         + VH 
Sbjct: 196  IVSWTSMIVAYVQNDCAEEGLMLFNRMREGFVDGNLFTVGSLVTACTKLGCLHQGKWVHG 255

Query: 196  HVVKSGFDGNSSVCNGLLSVYAKGVRDFKSAHKVFDDMPQRGM----AFCWTCMIAGYAQ 363
            +V+K+G   NS +   LL++Y K   D   A  VFD+             WT MI GY Q
Sbjct: 256  YVIKNGIQINSFLATSLLNMYVK-CGDIGDARYVFDEFSISNFDDDDLVFWTAMIVGYTQ 314

Query: 364  VGLSNEALNLFVRMIEENLVPRDDTMVSVLSACSSLQIGEIERWERVLIEFGGPPDCGVE 543
             G    AL LF       ++P   T+ S+LSAC+ L+   + +   VL+        G++
Sbjct: 315  RGYPQAALELFTDKKWYRILPNSVTLASLLSACAQLENIVMGKSLHVLVV-----KYGLD 369

Query: 544  GSSNEKIITVLIYLYGKLGKIEKSRELFDRIVANGGKSLLHWNAMIGGYVQNGLPIEALN 723
            G+S   +   L+ +Y K G    +R +F+  V    K ++ WN++I GY Q+G   EAL+
Sbjct: 370  GTS---LRNALVDMYAKCGLSFDARYVFETTV---DKDVVSWNSVISGYAQSGSAYEALD 423

Query: 724  VFQLMVAIQASRPNHVTMVSVLSACAQVGNLELGRWVHGYLKSAGSEGVLESNTFLATAF 903
            +F  M  +++  P+ VT+V VLSACA VG L++G  +H +   A   G++  + ++ TA 
Sbjct: 424  LFHRM-RLESFSPDAVTVVGVLSACASVGALQIGSSLHAF---AFKYGLVSCSIYVGTAL 479

Query: 904  IDMYSKCGSMDMAKEVFDQMVFKDVVSFNAMIMGLAMNGEGEQALMVFSKMEELGVHPNG 1083
            ++ Y+KCG  ++A+ VFD M  K+ V+++AMI G  M G+G  +L +F  M +  + PN 
Sbjct: 480  LNFYAKCGEANLARMVFDTMGEKNAVTWSAMIGGCGMQGDGVGSLALFRDMLKEKLVPNE 539

Query: 1084 GTFLGVLSACNHSGMVGEGRRIFLSMFPSYSIIPELEHYACYVDLLSRVGHIEEALKVVK 1263
              F  +L+AC+HSGMVGEG R+F  M    + +P ++HYAC VDLL+R G+++EAL  + 
Sbjct: 540  VVFTTILAACSHSGMVGEGLRLFDFMCKELNFVPSMKHYACMVDLLARAGNLKEALDFID 599

Query: 1264 SMPVAPNGLIWGALLGGCIAHSRVDIAQDVASELVEVDPSNPAGYVMLSNVYATDNRW-- 1437
             MPV P   ++GA L GC  HS  D  +     ++E+ P   + YV++SN+YA+D RW  
Sbjct: 600  KMPVQPGVGVFGAFLHGCGLHSNFDFGEVAIRRMLELHPDQASYYVLISNLYASDGRWGM 659

Query: 1438 ----REILELRGL 1464
                R++++ RGL
Sbjct: 660  VKQVRKMIKQRGL 672



 Score =  176 bits (446), Expect = 2e-41
 Identities = 138/438 (31%), Positives = 211/438 (48%), Gaps = 3/438 (0%)
 Frame = +1

Query: 13   NIFPFNALIRVLSNNLLSFHAFSVFKTLKSRSLSPNDLT-FSFFLKACFGFKDARNVQQV 189
            N++ F  +IR    N +  +  S +   +      NDL  FS  LKA    +D     ++
Sbjct: 94   NLYSFKLIIRWHFLNDIHSYVVSFYHLARLTLGFFNDLVVFSILLKASSHLRDLVLTTRL 153

Query: 190  HTHVVKSGFDGNSSVCNGLLSVYAKGVRDFKSAHKVFDDMPQRGMAFCWTCMIAGYAQVG 369
            H H++K+    +S V   L+  Y+K   +   A KVFD++P R +   WT MI  Y Q  
Sbjct: 154  HCHILKAN-SPDSFVLTSLVDAYSK-CGELHYARKVFDEIPDRTIV-SWTSMIVAYVQND 210

Query: 370  LSNEALNLFVRMIEENLVPRDDTMVSVLSACSSLQIGEIERWERVLIEFGGPPDCGVEGS 549
             + E L LF RM E  +     T+ S+++AC+ L      +W    +   G         
Sbjct: 211  CAEEGLMLFNRMREGFVDGNLFTVGSLVTACTKLGCLHQGKWVHGYVIKNGI-------Q 263

Query: 550  SNEKIITVLIYLYGKLGKIEKSRELFDRI-VAN-GGKSLLHWNAMIGGYVQNGLPIEALN 723
             N  + T L+ +Y K G I  +R +FD   ++N     L+ W AMI GY Q G P  AL 
Sbjct: 264  INSFLATSLLNMYVKCGDIGDARYVFDEFSISNFDDDDLVFWTAMIVGYTQRGYPQAALE 323

Query: 724  VFQLMVAIQASRPNHVTMVSVLSACAQVGNLELGRWVHGYLKSAGSEGVLESNTFLATAF 903
            +F      +   PN VT+ S+LSACAQ+ N+ +G+ +H  +   G +G     T L  A 
Sbjct: 324  LFTDKKWYRI-LPNSVTLASLLSACAQLENIVMGKSLHVLVVKYGLDG-----TSLRNAL 377

Query: 904  IDMYSKCGSMDMAKEVFDQMVFKDVVSFNAMIMGLAMNGEGEQALMVFSKMEELGVHPNG 1083
            +DMY+KCG    A+ VF+  V KDVVS+N++I G A +G   +AL +F +M      P+ 
Sbjct: 378  VDMYAKCGLSFDARYVFETTVDKDVVSWNSVISGYAQSGSAYEALDLFHRMRLESFSPDA 437

Query: 1084 GTFLGVLSACNHSGMVGEGRRIFLSMFPSYSIIPELEHYACYVDLLSRVGHIEEALKVVK 1263
             T +GVLSAC   G +  G  +    F    +   +      ++  ++ G    A  V  
Sbjct: 438  VTVVGVLSACASVGALQIGSSLHAFAFKYGLVSCSIYVGTALLNFYAKCGEANLARMVFD 497

Query: 1264 SMPVAPNGLIWGALLGGC 1317
            +M    N + W A++GGC
Sbjct: 498  TMG-EKNAVTWSAMIGGC 514



 Score = 77.0 bits (188), Expect = 2e-11
 Identities = 58/228 (25%), Positives = 111/228 (48%)
 Frame = +1

Query: 460  CSSLQIGEIERWERVLIEFGGPPDCGVEGSSNEKIITVLIYLYGKLGKIEKSRELFDRIV 639
            C++L    +++    L+  G PPD            T L+ LY   G +  +R LF R+ 
Sbjct: 46   CNNLDT--VKKLHASLLVHGLPPD------------TNLLSLYASFGFLRYARTLFHRLP 91

Query: 640  ANGGKSLLHWNAMIGGYVQNGLPIEALNVFQLMVAIQASRPNHVTMVSVLSACAQVGNLE 819
            ++   +L  +  +I  +  N +    ++ + L         + V    +L A + + +L 
Sbjct: 92   SH---NLYSFKLIIRWHFLNDIHSYVVSFYHLARLTLGFFNDLVVFSILLKASSHLRDLV 148

Query: 820  LGRWVHGYLKSAGSEGVLESNTFLATAFIDMYSKCGSMDMAKEVFDQMVFKDVVSFNAMI 999
            L   +H ++  A S      ++F+ T+ +D YSKCG +  A++VFD++  + +VS+ +MI
Sbjct: 149  LTTRLHCHILKANSP-----DSFVLTSLVDAYSKCGELHYARKVFDEIPDRTIVSWTSMI 203

Query: 1000 MGLAMNGEGEQALMVFSKMEELGVHPNGGTFLGVLSACNHSGMVGEGR 1143
            +    N   E+ LM+F++M E  V  N  T   +++AC   G + +G+
Sbjct: 204  VAYVQNDCAEEGLMLFNRMREGFVDGNLFTVGSLVTACTKLGCLHQGK 251



 Score = 60.1 bits (144), Expect = 2e-06
 Identities = 47/159 (29%), Positives = 76/159 (47%), Gaps = 2/159 (1%)
 Frame = +1

Query: 13  NIFPFNALIRVLSNNLLSFHAFSVFKTLKSRSLSPNDLTFSFFLKACFGFKDARNVQQVH 192
           ++  +N++I   + +  ++ A  +F  ++  S SP+ +T    L AC      +    +H
Sbjct: 401 DVVSWNSVISGYAQSGSAYEALDLFHRMRLESFSPDAVTVVGVLSACASVGALQIGSSLH 460

Query: 193 THVVKSGFDGNS-SVCNGLLSVYAKGVRDFKSAHKVFDDMPQRGMAFCWTCMIAGYAQVG 369
               K G    S  V   LL+ YAK   +   A  VFD M ++  A  W+ MI G    G
Sbjct: 461 AFAFKYGLVSCSIYVGTALLNFYAK-CGEANLARMVFDTMGEKN-AVTWSAMIGGCGMQG 518

Query: 370 LSNEALNLFVRMIEENLVPRDDTMVSVLSACS-SLQIGE 483
               +L LF  M++E LVP +    ++L+ACS S  +GE
Sbjct: 519 DGVGSLALFRDMLKEKLVPNEVVFTTILAACSHSGMVGE 557


>ref|XP_004243818.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g08820-like [Solanum lycopersicum]
          Length = 627

 Score =  552 bits (1423), Expect = e-154
 Identities = 273/483 (56%), Positives = 360/483 (74%)
 Frame = +1

Query: 10   PNIFPFNALIRVLSNNLLSFHAFSVFKTLKSRSLSPNDLTFSFFLKACFGFKDARNVQQV 189
            PNIFPFNA+IR+LS       AF VF  L+ +SL PN+LTFSF LKAC    ++  VQQV
Sbjct: 93   PNIFPFNAIIRILSEEGSFTDAFLVFNKLRGQSLLPNELTFSFLLKACSRSGNSYYVQQV 152

Query: 190  HTHVVKSGFDGNSSVCNGLLSVYAKGVRDFKSAHKVFDDMPQRGMAFCWTCMIAGYAQVG 369
            HT VVK GF  + S+CNGLLSVYA+G+++  SA KVFD+MP++ +  CWTC+I+GYA+ G
Sbjct: 153  HTLVVKLGFGEDPSLCNGLLSVYARGLKELHSARKVFDEMPEKDVV-CWTCLISGYAKFG 211

Query: 370  LSNEALNLFVRMIEENLVPRDDTMVSVLSACSSLQIGEIERWERVLIEFGGPPDCGVEGS 549
            +S EAL LF+ M++++L+P +DTM++VLSACS L +  IERW           D G  G 
Sbjct: 212  MSEEALGLFLCMVKKSLIPENDTMINVLSACSKLDMLNIERWIGNFWYSMQQYDLGCSGC 271

Query: 550  SNEKIITVLIYLYGKLGKIEKSRELFDRIVANGGKSLLHWNAMIGGYVQNGLPIEALNVF 729
              + + TVL+YLYGK GK++KSRE+F++I  +G +SL+ WNAMIG YVQNG  ++ L VF
Sbjct: 272  --DSVNTVLVYLYGKWGKVDKSREIFEQISGDGKRSLVPWNAMIGAYVQNGCALDGLCVF 329

Query: 730  QLMVAIQASRPNHVTMVSVLSACAQVGNLELGRWVHGYLKSAGSEGVLESNTFLATAFID 909
            +LM+ +    PNHVTMVSVLSAC QVG+L LG WVH Y++ +  +  L SN  LATA ID
Sbjct: 330  RLMMELNCCCPNHVTMVSVLSACTQVGDLNLGVWVHEYMQGSRQKSFLLSNANLATALID 389

Query: 910  MYSKCGSMDMAKEVFDQMVFKDVVSFNAMIMGLAMNGEGEQALMVFSKMEELGVHPNGGT 1089
            MYSKCGS++ A++VFDQ+  KDVVSFNAMIMGLA+NG+G++AL +FS+M +L + PN GT
Sbjct: 390  MYSKCGSLERAEDVFDQLFVKDVVSFNAMIMGLAVNGKGKEALKLFSQMLDLNLRPNAGT 449

Query: 1090 FLGVLSACNHSGMVGEGRRIFLSMFPSYSIIPELEHYACYVDLLSRVGHIEEALKVVKSM 1269
            FLG+L AC+H+G+  EGR+IF  M   + I P LEHYA Y+DLL+RVG++EEAL+V  SM
Sbjct: 450  FLGLLCACSHAGLAAEGRQIFKEMSQCFRIAPRLEHYASYIDLLARVGYVEEALQVATSM 509

Query: 1270 PVAPNGLIWGALLGGCIAHSRVDIAQDVASELVEVDPSNPAGYVMLSNVYATDNRWREIL 1449
            P  PN  +WGALLGGC+ H+R+++A+ ++S LVEVDP+N AGYVMLSN YA D+ W  I 
Sbjct: 510  PFKPNNFVWGALLGGCMLHNRLELARIISSILVEVDPNNSAGYVMLSNTYAIDHHWGAIS 569

Query: 1450 ELR 1458
             LR
Sbjct: 570  RLR 572


>ref|XP_006348971.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g08820-like [Solanum tuberosum]
          Length = 627

 Score =  551 bits (1421), Expect = e-154
 Identities = 273/486 (56%), Positives = 360/486 (74%)
 Frame = +1

Query: 1    LFQPNIFPFNALIRVLSNNLLSFHAFSVFKTLKSRSLSPNDLTFSFFLKACFGFKDARNV 180
            L +PN+FPFNA+IRVLS       AF VF  L+ +SL PN+LTFSF LKAC    ++  V
Sbjct: 90   LKRPNLFPFNAIIRVLSEEGFFTDAFLVFNKLRDQSLLPNELTFSFLLKACSRSGNSYYV 149

Query: 181  QQVHTHVVKSGFDGNSSVCNGLLSVYAKGVRDFKSAHKVFDDMPQRGMAFCWTCMIAGYA 360
            QQVHT VVK GF  + S+CNGLLSVYA+G+++  SA ++FD+MP +G+  CWTC+I+GYA
Sbjct: 150  QQVHTLVVKLGFGEDPSLCNGLLSVYARGLKELHSARQLFDEMPDKGVV-CWTCLISGYA 208

Query: 361  QVGLSNEALNLFVRMIEENLVPRDDTMVSVLSACSSLQIGEIERWERVLIEFGGPPDCGV 540
            + GLS EAL LF+ M++++L+P +DTM++VLSACS L +  IE+W           D G 
Sbjct: 209  KFGLSEEALGLFLCMVKKSLIPENDTMINVLSACSKLDMLNIEKWIGNFWYSMQQYDLGC 268

Query: 541  EGSSNEKIITVLIYLYGKLGKIEKSRELFDRIVANGGKSLLHWNAMIGGYVQNGLPIEAL 720
             G   + + TVL+YLYG  GK++KSRE+F++I  +G +SLL WNAMIG YVQNG  ++ L
Sbjct: 269  SGC--DSVNTVLVYLYGNWGKVDKSREIFEQISGDGKRSLLPWNAMIGAYVQNGCALDGL 326

Query: 721  NVFQLMVAIQASRPNHVTMVSVLSACAQVGNLELGRWVHGYLKSAGSEGVLESNTFLATA 900
             +F+LM+ +    PNHVTMVSVLSAC QVG+L LG W+H Y+K +  +  L SN  LATA
Sbjct: 327  CLFRLMMELNCCCPNHVTMVSVLSACTQVGDLYLGMWIHEYMKGSRQKSFLLSNANLATA 386

Query: 901  FIDMYSKCGSMDMAKEVFDQMVFKDVVSFNAMIMGLAMNGEGEQALMVFSKMEELGVHPN 1080
             IDMYSKCGS++ A +VFDQ+V KDVVSFNAMIMGLA+NG+G++AL +FS+M  L + PN
Sbjct: 387  LIDMYSKCGSLERAGDVFDQLVVKDVVSFNAMIMGLAVNGKGKEALKLFSQMLGLNLRPN 446

Query: 1081 GGTFLGVLSACNHSGMVGEGRRIFLSMFPSYSIIPELEHYACYVDLLSRVGHIEEALKVV 1260
             GTFLG+L AC+H+G+  EGR+IF  M   + I P LEHYA Y+DLL+RVG++EEAL+V 
Sbjct: 447  AGTFLGLLCACSHAGLAAEGRQIFKEMSQCFRIAPRLEHYASYIDLLARVGYVEEALQVA 506

Query: 1261 KSMPVAPNGLIWGALLGGCIAHSRVDIAQDVASELVEVDPSNPAGYVMLSNVYATDNRWR 1440
             SMP  PN  +WGALLGGC+ H+R+++A+ ++S LVEVDP+N AGYVMLSN YA D+ W 
Sbjct: 507  TSMPFKPNNFVWGALLGGCVLHNRLELARIISSILVEVDPNNSAGYVMLSNTYAIDHHWG 566

Query: 1441 EILELR 1458
             I  LR
Sbjct: 567  AISRLR 572


>ref|XP_002269319.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
            chloroplastic-like [Vitis vinifera]
          Length = 532

 Score =  484 bits (1246), Expect = e-134
 Identities = 237/387 (61%), Positives = 295/387 (76%)
 Frame = +1

Query: 307  MPQRGMAFCWTCMIAGYAQVGLSNEALNLFVRMIEENLVPRDDTMVSVLSACSSLQIGEI 486
            MP R M  CWT +IAG AQ G + E L LF  M++ENL P +DT+VSVLSACS L+  EI
Sbjct: 1    MPDRAMVRCWTSLIAGSAQSGQTEEVLRLFFMMVKENLRPENDTIVSVLSACSKLEAVEI 60

Query: 487  ERWERVLIEFGGPPDCGVEGSSNEKIITVLIYLYGKLGKIEKSRELFDRIVANGGKSLLH 666
            E+W  +L EF    D G  G   + + TVL YLYGK GK+EK +E FD IV  G +S+L 
Sbjct: 61   EKWVMILSEFINDDDTGSFG--RDSVNTVLAYLYGKWGKVEKCKERFDEIVGIGKRSVLP 118

Query: 667  WNAMIGGYVQNGLPIEALNVFQLMVAIQASRPNHVTMVSVLSACAQVGNLELGRWVHGYL 846
            WN +I  YVQNG   EAL++F++M+     RPNHVTMVSVLSACAQVG+L+LG+W+HGY+
Sbjct: 119  WNVIISAYVQNGCSFEALSLFRVMIEDLNLRPNHVTMVSVLSACAQVGDLDLGKWIHGYV 178

Query: 847  KSAGSEGVLESNTFLATAFIDMYSKCGSMDMAKEVFDQMVFKDVVSFNAMIMGLAMNGEG 1026
            KS G + ++ESNTFLATA IDMYSKCG++  AK+VF+QMV KDVVSFNAMIMGLA+NGEG
Sbjct: 179  KSEGCKAIVESNTFLATALIDMYSKCGNLGKAKDVFEQMVSKDVVSFNAMIMGLAINGEG 238

Query: 1027 EQALMVFSKMEELGVHPNGGTFLGVLSACNHSGMVGEGRRIFLSMFPSYSIIPELEHYAC 1206
            E+AL +FSKM+EL + PN GTFLGVL AC+HSG++  GR++FL M P +S+ PELEHYAC
Sbjct: 239  EEALRLFSKMQELSLRPNSGTFLGVLCACSHSGLLDTGRQMFLDMIPHFSVPPELEHYAC 298

Query: 1207 YVDLLSRVGHIEEALKVVKSMPVAPNGLIWGALLGGCIAHSRVDIAQDVASELVEVDPSN 1386
            YVDLL+RVG +EEA +VV SMP  PN  +WGALL GC  HSR+++AQDV+ +LV+VDP N
Sbjct: 299  YVDLLARVGLLEEAFEVVASMPFVPNNFVWGALLQGCRLHSRLELAQDVSQKLVKVDPEN 358

Query: 1387 PAGYVMLSNVYATDNRWREILELRGLM 1467
             AGYVM SN  A+D +W E+  LR LM
Sbjct: 359  SAGYVMFSNALASDQQWGEVSGLRWLM 385



 Score = 67.8 bits (164), Expect = 1e-08
 Identities = 71/284 (25%), Positives = 126/284 (44%), Gaps = 10/284 (3%)
 Frame = +1

Query: 13  NIFPFNALIRVLSNNLLSFHAFSVFKTL-KSRSLSPNDLTFSFFLKACFGFKDARNVQQV 189
           ++ P+N +I     N  SF A S+F+ + +  +L PN +T    L AC    D    + +
Sbjct: 115 SVLPWNVIISAYVQNGCSFEALSLFRVMIEDLNLRPNHVTMVSVLSACAQVGDLDLGKWI 174

Query: 190 HTHVVKSG----FDGNSSVCNGLLSVYAKGVRDFKSAHKVFDDMPQRGMAFCWTCMIAGY 357
           H +V   G     + N+ +   L+ +Y+K   +   A  VF+ M  + +   +  MI G 
Sbjct: 175 HGYVKSEGCKAIVESNTFLATALIDMYSK-CGNLGKAKDVFEQMVSKDVV-SFNAMIMGL 232

Query: 358 AQVGLSNEALNLFVRMIEENLVPRDDTMVSVLSACSSLQIGEIER--WERVLIEFGGPPD 531
           A  G   EAL LF +M E +L P   T + VL ACS   + +  R  +  ++  F  PP+
Sbjct: 233 AINGEGEEALRLFSKMQELSLRPNSGTFLGVLCACSHSGLLDTGRQMFLDMIPHFSVPPE 292

Query: 532 CGVEGSSNEKIITVLIYLYGKLGKIEKSRELFDRI--VANGGKSLLHWNAMIGGYVQNGL 705
                    +     + L  ++G +E++ E+   +  V N       W A++ G   +  
Sbjct: 293 L--------EHYACYVDLLARVGLLEEAFEVVASMPFVPNN----FVWGALLQGCRLHSR 340

Query: 706 PIEALNVFQLMVAIQ-ASRPNHVTMVSVLSACAQVGNLELGRWV 834
              A +V Q +V +   +   +V   + L++  Q G +   RW+
Sbjct: 341 LELAQDVSQKLVKVDPENSAGYVMFSNALASDQQWGEVSGLRWL 384


>ref|XP_004309732.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
            chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 435

 Score =  473 bits (1216), Expect = e-130
 Identities = 232/387 (59%), Positives = 294/387 (75%)
 Frame = +1

Query: 307  MPQRGMAFCWTCMIAGYAQVGLSNEALNLFVRMIEENLVPRDDTMVSVLSACSSLQIGEI 486
            MP +G+  CWT ++AGYAQ G + EAL +FV M++ NL P D T+VSVLSACSSL + EI
Sbjct: 1    MPDKGVVCCWTSLVAGYAQSGYAEEALQVFVMMVKGNLRPEDATLVSVLSACSSLDMSEI 60

Query: 487  ERWERVLIEFGGPPDCGVEGSSNEKIITVLIYLYGKLGKIEKSRELFDRIVANGGKSLLH 666
             +W  +L       D  V G  + K  TVL+YLYGK GK+EKSRE+FD +  +G +S+L 
Sbjct: 61   GKWVLILSRV----DDNVVGLDSAK--TVLVYLYGKWGKVEKSREMFDGVSESGKRSVLP 114

Query: 667  WNAMIGGYVQNGLPIEALNVFQLMVAIQASRPNHVTMVSVLSACAQVGNLELGRWVHGYL 846
            WNA+IG YVQNG P++ L+VF+LMV     +PNHVTMVSVLSACAQVG+LELGRWVH YL
Sbjct: 115  WNAVIGAYVQNGCPLDCLSVFRLMVGDPTRKPNHVTMVSVLSACAQVGDLELGRWVHEYL 174

Query: 847  KSAGSEGVLESNTFLATAFIDMYSKCGSMDMAKEVFDQMVFKDVVSFNAMIMGLAMNGEG 1026
            KS GS  V++SN  LATA IDMYSKCGS+  AKEVFDQMV KD+VSFNAMIM LA+N EG
Sbjct: 175  KSKGSRCVIKSNRILATALIDMYSKCGSLVNAKEVFDQMVSKDIVSFNAMIMSLAVNSEG 234

Query: 1027 EQALMVFSKMEELGVHPNGGTFLGVLSACNHSGMVGEGRRIFLSMFPSYSIIPELEHYAC 1206
            E+AL +FSK+++ G+ PN GTFLG L AC+HSG   +GR+IF  M   +SI P+LEHYAC
Sbjct: 235  EEALRLFSKVQDFGLQPNAGTFLGALCACSHSGFSKKGRQIFKDMTSVFSISPKLEHYAC 294

Query: 1207 YVDLLSRVGHIEEALKVVKSMPVAPNGLIWGALLGGCIAHSRVDIAQDVASELVEVDPSN 1386
            Y+DLL+R G +EEAL+VV SMP  PN ++WGALLGGC+ HSR+D+A+ V+ +LV+ DP N
Sbjct: 295  YIDLLARAGLVEEALEVVISMPFEPNSIVWGALLGGCLLHSRLDLAEYVSDKLVQSDPDN 354

Query: 1387 PAGYVMLSNVYATDNRWREILELRGLM 1467
              GYVML+N +A+D+RW ++  LR  M
Sbjct: 355  TGGYVMLANAFASDHRWGDVSSLRRFM 381



 Score = 96.3 bits (238), Expect = 3e-17
 Identities = 97/348 (27%), Positives = 160/348 (45%), Gaps = 10/348 (2%)
 Frame = +1

Query: 73   AFSVFKTLKSRSLSPNDLTFSFFLKACFGF------KDARNVQQVHTHVVKSGFDGNSSV 234
            A  VF  +   +L P D T    L AC         K    + +V  +VV  G D   +V
Sbjct: 26   ALQVFVMMVKGNLRPEDATLVSVLSACSSLDMSEIGKWVLILSRVDDNVV--GLDSAKTV 83

Query: 235  CNGLLSVYAKGVRDFKSAHKVFDDMPQRG--MAFCWTCMIAGYAQVGLSNEALNLFVRMI 408
               L+ +Y K  +  KS  ++FD + + G      W  +I  Y Q G   + L++F  M+
Sbjct: 84   ---LVYLYGKWGKVEKS-REMFDGVSESGKRSVLPWNAVIGAYVQNGCPLDCLSVFRLMV 139

Query: 409  -EENLVPRDDTMVSVLSACSSLQIGEIERWERVLIEFGGPPDCGVEGSSNEKIITVLIYL 585
             +    P   TMVSVLSAC+ +   E+ RW    ++  G   C ++  SN  + T LI +
Sbjct: 140  GDPTRKPNHVTMVSVLSACAQVGDLELGRWVHEYLKSKG-SRCVIK--SNRILATALIDM 196

Query: 586  YGKLGKIEKSRELFDRIVANGGKSLLHWNAMIGGYVQNGLPIEALNVFQLMVAIQASRPN 765
            Y K G +  ++E+FD++V+   K ++ +NAMI     N    EAL +F   V     +PN
Sbjct: 197  YSKCGSLVNAKEVFDQMVS---KDIVSFNAMIMSLAVNSEGEEALRLFS-KVQDFGLQPN 252

Query: 766  HVTMVSVLSACAQVGNLELGRWVHGYLKSAGSEGVLESNTFLATAFIDMYSKCGSMDMAK 945
              T +  L AC+  G  + GR +   + S  S   +         +ID+ ++ G ++ A 
Sbjct: 253  AGTFLGALCACSHSGFSKKGRQIFKDMTSVFS---ISPKLEHYACYIDLLARAGLVEEAL 309

Query: 946  EVFDQMVFK-DVVSFNAMIMGLAMNGEGEQALMVFSKMEELGVHPNGG 1086
            EV   M F+ + + + A++ G  ++   + A  V  K+ +      GG
Sbjct: 310  EVVISMPFEPNSIVWGALLGGCLLHSRLDLAEYVSDKLVQSDPDNTGG 357


>gb|EPS71925.1| hypothetical protein M569_02834, partial [Genlisea aurea]
          Length = 583

 Score =  466 bits (1200), Expect = e-129
 Identities = 250/502 (49%), Positives = 334/502 (66%), Gaps = 13/502 (2%)
 Frame = +1

Query: 1    LFQPNIFPFNALIRVLSNNL--LSFHAFSVFKTLK-SRSLSPNDLTFSFFLKACFGFKDA 171
            L  PNIFP+NA+IRVL+     LS  A ++FK LK S + +PN+LTFSF LKA    ++ 
Sbjct: 49   LRNPNIFPYNAIIRVLAEGGGGLSGEALTIFKELKFSDAAAPNELTFSFVLKAVSAGEEE 108

Query: 172  RNVQ-----QVHTHVVKSGFDGNSSVCNGLLSVYAKGVRDFKSAHKVFDDMPQRGMAFCW 336
               +     QVH+HV+KS +  +S +C GL+S YA   RD +SA +VFD+M  R +  CW
Sbjct: 109  EEEEEAVLPQVHSHVLKSDYLRDSFLCYGLISAYA-AARDIQSARQVFDEMSDRSLVSCW 167

Query: 337  TCMIAGYAQVGLSNEALNLFVRMIEENLVPRDDTMVSVLSACSSLQIGEIERWERVLIEF 516
            T +I GYA++G +   L LF+ M++ENL P ++TMV VLSACSSL + +I  W   L  +
Sbjct: 168  TVLIGGYARLGSAAGGLELFIAMLKENLRPDNETMVGVLSACSSLPVEDIREWAGRLERY 227

Query: 517  GGPPDCGVEGSSNEKIITVLIYLYGKLGKIEKSRELFDRIVANGGK-SLLHWNAMIGGYV 693
                    EG  N+ + T L+ LYGK G    SR  FD I  NGG+ S+L WNAMI  Y+
Sbjct: 228  ----KAASEGFGNDHVNTSLVCLYGKSGNTAASRASFDEIPENGGRRSVLVWNAMISSYL 283

Query: 694  QNGLPIEALNVFQLMVAIQ---ASRPNHVTMVSVLSACAQVGNLELGRWVHGYLKSAGSE 864
            QNG P EA+ VF+ M+       S PNHVTMVSVLSACA+VG+ +LG WVHGY++S+G  
Sbjct: 284  QNGCPSEAIGVFKSMMTAADPCVSPPNHVTMVSVLSACAEVGDSDLGVWVHGYVRSSGKR 343

Query: 865  GVLESNTFLATAFIDMYSKCGSMDMAKEVFDQMVFKDVVSFNAMIMGLAMNGEGEQALMV 1044
             +  SN  LAT+ I+MY+KCG +D A++VF +M  +DV++FNAMI GLA+NG+G +AL +
Sbjct: 344  SLPSSNVNLATSLIEMYAKCGELDEARKVFGEMCDRDVIAFNAMITGLAINGKGIEALTL 403

Query: 1045 FSKMEEL-GVHPNGGTFLGVLSACNHSGMVGEGRRIFLSMFPSYSIIPELEHYACYVDLL 1221
            FS+MEE   + P+  TF G LSAC+HSG++  GR +F  M       P +EHY CYVDLL
Sbjct: 404  FSRMEEAHRLAPDSATFCGALSACSHSGLLRRGREVFGKMIRVSP--PRVEHYGCYVDLL 461

Query: 1222 SRVGHIEEALKVVKSMPVAPNGLIWGALLGGCIAHSRVDIAQDVASELVEVDPSNPAGYV 1401
            SR G ++EAL V  SMP  PN   WGA+L GC+ H R++IA+ VAS LV+VDP N  GYV
Sbjct: 462  SRSGRLDEALGVATSMPFEPNSYTWGAILTGCVVHGRLEIAESVASMLVDVDPDNSGGYV 521

Query: 1402 MLSNVYATDNRWREILELRGLM 1467
            +LSN +A+D +WR + ELR  M
Sbjct: 522  LLSNTFASDRKWRRVAELRRAM 543


>gb|EYU37608.1| hypothetical protein MIMGU_mgv1a006142mg [Mimulus guttatus]
          Length = 455

 Score =  449 bits (1155), Expect = e-123
 Identities = 223/406 (54%), Positives = 302/406 (74%), Gaps = 1/406 (0%)
 Frame = +1

Query: 253  VYAKGVRDFKSAHKVFDDMPQRGMAFCWTCMIAGYAQVGLSNEALNLFVRMIEENLVPRD 432
            VYAK V+D +SA +VFDDMP R +  CWT +I+GYA++G S +ALNLF  M++ENL+P  
Sbjct: 2    VYAKVVKDLRSARQVFDDMPDRNLVCCWTSLISGYAKLGSSEDALNLFTMMLDENLLPES 61

Query: 433  DTMVSVLSACSSLQIGEIERWERVLIEFGGPPDCGVEGSSNEKIITVLIYLYGKLGKIEK 612
            DTMVSVLSACS L    +E+W +++       +C     +++ +  VL+YLYGK  K+E+
Sbjct: 62   DTMVSVLSACSRLTPPHLEKWVKLMTHM--LKECN--NLASDYVNIVLVYLYGKCRKVEQ 117

Query: 613  SRELFDRIVANGGKSLLHWNAMIGGYVQNGLPIEALNVFQLMVAIQASRPNHVTMVSVLS 792
            SR  F  I   G +S+L WN MIG YVQNG P+EAL VF+ M+      PNHVTMVS+LS
Sbjct: 118  SRANFYEISDKGKRSILSWNTMIGTYVQNGCPLEALTVFKSMMENYDCCPNHVTMVSILS 177

Query: 793  ACAQVGNLELGRWVHGYLKSAGSEGVLESNTFLATAFIDMYSKCGSMDMAKEVFDQMVFK 972
            ACA++G+L+LG WVH Y++++G + VL SN  LATA IDMYSKCG++D+A+EVF Q+V K
Sbjct: 178  ACAEIGDLDLGIWVHNYMRTSGKKHVLSSNVNLATALIDMYSKCGNLDVAREVFAQIVEK 237

Query: 973  DVVSFNAMIMGLAMNGEGEQALMVFSKMEELGVHPNGGTFLGVLSACNHSGMVGEGRRIF 1152
            DVVSFNAMI+GLA+NG+G++AL +FS+M+EL + P+ GTFLG LSAC+HSG++ +GR IF
Sbjct: 238  DVVSFNAMIIGLAVNGKGDEALTLFSEMQELRLLPDSGTFLGALSACSHSGLLDKGREIF 297

Query: 1153 LSMFPSYSII-PELEHYACYVDLLSRVGHIEEALKVVKSMPVAPNGLIWGALLGGCIAHS 1329
              M    S+I P+LEHY+CY+DLL+R G+IEEAL VV  MP   N  +WGA+L G + H+
Sbjct: 298  DEMTRKDSLISPKLEHYSCYIDLLARSGYIEEALGVVSCMPFEANKFVWGAILAGSVLHN 357

Query: 1330 RVDIAQDVASELVEVDPSNPAGYVMLSNVYATDNRWREILELRGLM 1467
            R++IA++V+S LV VDP N  GYVMLSN +A+D  WR + +LR +M
Sbjct: 358  RLEIARNVSSMLVGVDPENSGGYVMLSNSFASDLEWRSVSKLRVVM 403


>ref|XP_002518643.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223542024|gb|EEF43568.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 318

 Score =  377 bits (967), Expect = e-102
 Identities = 188/285 (65%), Positives = 229/285 (80%)
 Frame = +1

Query: 307  MPQRGMAFCWTCMIAGYAQVGLSNEALNLFVRMIEENLVPRDDTMVSVLSACSSLQIGEI 486
            MP++G+  CWT +I+G+AQ G S E L +F  M++ENL P +DTMVSV SACS+L+I +I
Sbjct: 1    MPEKGLLCCWTSLISGFAQSGYSEEVLKIFCLMVKENLEPENDTMVSVFSACSNLEICQI 60

Query: 487  ERWERVLIEFGGPPDCGVEGSSNEKIITVLIYLYGKLGKIEKSRELFDRIVANGGKSLLH 666
            E+W  VL+E     D  ++ S+ +K+  VL+YLYGKLGKIEKSRE FD I  +G +S+L 
Sbjct: 61   EKWLTVLVELN--IDGNLKSSTCDKVNNVLVYLYGKLGKIEKSRERFDDISDSGKRSVLP 118

Query: 667  WNAMIGGYVQNGLPIEALNVFQLMVAIQASRPNHVTMVSVLSACAQVGNLELGRWVHGYL 846
            WN+MI  YVQNG  +EAL +F LMV    SRPNHVTMVSVLSACAQVGNLELGRWVH YL
Sbjct: 119  WNSMINAYVQNGYALEALCIFHLMVKDPNSRPNHVTMVSVLSACAQVGNLELGRWVHEYL 178

Query: 847  KSAGSEGVLESNTFLATAFIDMYSKCGSMDMAKEVFDQMVFKDVVSFNAMIMGLAMNGEG 1026
            K  G +GVLESNTFLATA IDMYSKCGS+D AKEVF QMV KDVVSFNAMIMGLA+NGEG
Sbjct: 179  KFKGRKGVLESNTFLATALIDMYSKCGSLDKAKEVFYQMVSKDVVSFNAMIMGLAINGEG 238

Query: 1027 EQALMVFSKMEELGVHPNGGTFLGVLSACNHSGMVGEGRRIFLSM 1161
            ++A+ +FSK++ELG+HPNGGTFLG+L AC+HSG+  EGR+IFL M
Sbjct: 239  QEAVKLFSKVQELGLHPNGGTFLGLLWACSHSGLSDEGRQIFLDM 283


>ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g08820-like [Vitis vinifera]
          Length = 686

 Score =  362 bits (930), Expect = 2e-97
 Identities = 202/487 (41%), Positives = 297/487 (60%), Gaps = 3/487 (0%)
 Frame = +1

Query: 7    QPNIFPFNALIRVLSNNLLSFHAFSVFKTLKSRSLSPNDLTFSFFLKACFGFKDARNVQQ 186
            QPNIF +N +IR L +N     A   +  ++S    PN+ TF F LKAC    D +   +
Sbjct: 74   QPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLKACARLLDLQLGVK 133

Query: 187  VHTHVVKSGFDGNSSVCNGLLSVYAKGVRDFKSAHKVFDDMPQRGMAFCWTCMIAGYAQV 366
            +HT VVK GFD +  V   L+ +YAK     + AHKVFDD+P + +   WT +I+GY  V
Sbjct: 134  IHTLVVKGGFDCDVFVKTSLVCLYAK-CGYLEDAHKVFDDIPDKNVV-SWTAIISGYIGV 191

Query: 367  GLSNEALNLFVRMIEENLVPRDDTMVSVLSACSSLQIGEIERWE---RVLIEFGGPPDCG 537
            G   EA+++F R++E NL P   T+V VLSAC+  Q+G++   E   + ++E G      
Sbjct: 192  GKFREAIDMFRRLLEMNLAPDSFTIVRVLSACT--QLGDLNSGEWIHKCIMEMGMV---- 245

Query: 538  VEGSSNEKIITVLIYLYGKLGKIEKSRELFDRIVANGGKSLLHWNAMIGGYVQNGLPIEA 717
                 N  + T L+ +Y K G +EK+R +FD +     K ++ W AMI GY  NGLP EA
Sbjct: 246  ----RNVFVGTSLVDMYAKCGNMEKARSVFDGMPE---KDIVSWGAMIQGYALNGLPKEA 298

Query: 718  LNVFQLMVAIQASRPNHVTMVSVLSACAQVGNLELGRWVHGYLKSAGSEGVLESNTFLAT 897
            +++F L +  +  +P+  T+V VLSACA++G LELG WV G +           N  L T
Sbjct: 299  IDLF-LQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLV----DRNEFLYNPVLGT 353

Query: 898  AFIDMYSKCGSMDMAKEVFDQMVFKDVVSFNAMIMGLAMNGEGEQALMVFSKMEELGVHP 1077
            A ID+Y+KCGSM  A EVF  M  KD V +NA+I GLAMNG  + +  +F ++E+LG+ P
Sbjct: 354  ALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKP 413

Query: 1078 NGGTFLGVLSACNHSGMVGEGRRIFLSMFPSYSIIPELEHYACYVDLLSRVGHIEEALKV 1257
            +G TF+G+L  C H+G+V EGRR F SM+  +S+ P +EHY C VDLL R G ++EA ++
Sbjct: 414  DGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQL 473

Query: 1258 VKSMPVAPNGLIWGALLGGCIAHSRVDIAQDVASELVEVDPSNPAGYVMLSNVYATDNRW 1437
            +++MP+  N ++WGALLG C  H    +A+    +L+E++P N   YV+LSN+Y+ + +W
Sbjct: 474  IRNMPMEANAIVWGALLGACRIHRDTQLAELALKQLIELEPWNSGNYVLLSNIYSANLKW 533

Query: 1438 REILELR 1458
             E  ++R
Sbjct: 534  DEAAKVR 540



 Score =  174 bits (440), Expect = 1e-40
 Identities = 118/396 (29%), Positives = 204/396 (51%)
 Frame = +1

Query: 157  GFKDARNVQQVHTHVVKSGFDGNSSVCNGLLSVYAKGVRDFKSAHKVFDDMPQRGMAFCW 336
            GF   ++++ +H H+++ G   ++ + N +L   +    D      +F  + Q  + F W
Sbjct: 23   GFNSFKHLKHLHAHLLRFGLCHDNYLLNMILRC-SFDFSDTNYTRFLFHQIKQPNI-FLW 80

Query: 337  TCMIAGYAQVGLSNEALNLFVRMIEENLVPRDDTMVSVLSACSSLQIGEIERWERVLIEF 516
              MI G       ++A+  +  M  E  +P + T   VL AC+ L   ++      L+  
Sbjct: 81   NTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVK 140

Query: 517  GGPPDCGVEGSSNEKIITVLIYLYGKLGKIEKSRELFDRIVANGGKSLLHWNAMIGGYVQ 696
            GG  DC V       + T L+ LY K G +E + ++FD I     K+++ W A+I GY+ 
Sbjct: 141  GG-FDCDV------FVKTSLVCLYAKCGYLEDAHKVFDDI---PDKNVVSWTAIISGYIG 190

Query: 697  NGLPIEALNVFQLMVAIQASRPNHVTMVSVLSACAQVGNLELGRWVHGYLKSAGSEGVLE 876
             G   EA+++F+ ++ +  + P+  T+V VLSAC Q+G+L  G W+H  +   G    + 
Sbjct: 191  VGKFREAIDMFRRLLEMNLA-PDSFTIVRVLSACTQLGDLNSGEWIHKCIMEMG----MV 245

Query: 877  SNTFLATAFIDMYSKCGSMDMAKEVFDQMVFKDVVSFNAMIMGLAMNGEGEQALMVFSKM 1056
             N F+ T+ +DMY+KCG+M+ A+ VFD M  KD+VS+ AMI G A+NG  ++A+ +F +M
Sbjct: 246  RNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQM 305

Query: 1057 EELGVHPNGGTFLGVLSACNHSGMVGEGRRIFLSMFPSYSIIPELEHYACYVDLLSRVGH 1236
            +   V P+  T +GVLSAC   G +  G  +   +      +         +DL ++ G 
Sbjct: 306  QRENVKPDCYTVVGVLSACARLGALELGEWV-SGLVDRNEFLYNPVLGTALIDLYAKCGS 364

Query: 1237 IEEALKVVKSMPVAPNGLIWGALLGGCIAHSRVDIA 1344
            +  A +V K M    + ++W A++ G   +  V I+
Sbjct: 365  MSRAWEVFKGMK-EKDRVVWNAIISGLAMNGYVKIS 399


>ref|XP_004246883.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g08820-like [Solanum lycopersicum]
          Length = 688

 Score =  361 bits (926), Expect = 5e-97
 Identities = 205/489 (41%), Positives = 295/489 (60%), Gaps = 2/489 (0%)
 Frame = +1

Query: 7    QPNIFPFNALIRVLSNNLLSFHAFSVFKTLKSRSLSPNDLTFSFFLKACFGFKDARNVQQ 186
            +PNIF +N +IR L +N     +   F  +++    PN+ TF F LK+C    D     +
Sbjct: 75   EPNIFLYNTMIRGLVSNNCFHQSIEFFHGMRNEGFLPNNFTFPFLLKSCTRLSDFELGVK 134

Query: 187  VHTHVVKSGFDGNSSVCNGLLSVYAK-GVRDFKSAHKVFDDMPQRGMAFCWTCMIAGYAQ 363
             H  VVK GFD +  V  GL+  YA+ G  D   AH++FDD+P++ +   WT +I GY  
Sbjct: 135  AHGLVVKGGFDYDVFVKTGLVCFYARCGFLD--DAHQMFDDIPEKNVV-SWTAIITGYID 191

Query: 364  VGLSNEALNLFVRMIEENLVPRDDTMVSVLSACSSLQIGEIERWERVLIEFGGPPDCGVE 543
             G   EA++LF R +E  L P   T+V VLSACS  ++G++   E +    G   + G+ 
Sbjct: 192  FGKFKEAIDLFRRSLEMGLSPDSFTLVRVLSACS--RVGDVSAGEWI---HGYAVEMGI- 245

Query: 544  GSSNEKIITVLIYLYGKLGKIEKSRELFDRIVANGGKSLLHWNAMIGGYVQNGLPIEALN 723
               N  + T L+ +Y K G++ K+RE+FD +V    K ++ W+AMI GY  NGLP EAL 
Sbjct: 246  -GRNVFVNTGLVDMYAKCGEMAKAREVFDEMVE---KDVVSWSAMIQGYAVNGLPKEALE 301

Query: 724  VFQLMVAIQASRPNHVTMVSVLSACAQVGNLELGRWVHGYLKSAGSEGVLESNTFLATAF 903
            VF  M   +  RP+  +MV VLSAC+++G LE+G W    +          SN  L TA 
Sbjct: 302  VFYTMQR-ENVRPDCYSMVGVLSACSRLGALEVGEWASKLMDM----NEFLSNAVLGTAL 356

Query: 904  IDMYSKCGSMDMAKEVFDQM-VFKDVVSFNAMIMGLAMNGEGEQALMVFSKMEELGVHPN 1080
            IDMY+KCG M  A E+F QM V KD V +NA++ GLAM+G  + A   FS++E+LG+ PN
Sbjct: 357  IDMYAKCGRMVSAWEIFKQMLVKKDRVIWNAVLSGLAMHGYVKSAFCCFSQVEKLGIKPN 416

Query: 1081 GGTFLGVLSACNHSGMVGEGRRIFLSMFPSYSIIPELEHYACYVDLLSRVGHIEEALKVV 1260
            G TF+G+L AC H+G+V EGR+ F SM   YS+ P +EHY C VDLL R G ++EA  ++
Sbjct: 417  GNTFIGLLCACTHAGLVDEGRKYFQSMTHLYSLEPSIEHYGCMVDLLGRAGLLDEAHSLI 476

Query: 1261 KSMPVAPNGLIWGALLGGCIAHSRVDIAQDVASELVEVDPSNPAGYVMLSNVYATDNRWR 1440
            +SMP+  N ++WGALL GC  H    +A+ V  +L+E++P N   YV LSN+YA++N+W 
Sbjct: 477  ESMPMKANAVVWGALLSGCRLHRDTKLAEHVLKQLIELEPWNSGNYVHLSNIYASNNKWD 536

Query: 1441 EILELRGLM 1467
            +  ++R  M
Sbjct: 537  DSEKIRSSM 545



 Score =  192 bits (489), Expect = 2e-46
 Identities = 127/400 (31%), Positives = 208/400 (52%), Gaps = 4/400 (1%)
 Frame = +1

Query: 157  GFKDARNVQQVHTHVVKSGFDGNSSVCNGLLSVYAKGVRDFKSAHKVFDDMPQRGMAFCW 336
            GF+    ++ +H  ++++GFD N+ + N LL        +   A  VF +  Q    F +
Sbjct: 23   GFQSFNQLKHIHARLIRAGFDQNNYLLNLLLKFTLNNFNNPNYAKLVF-NQAQEPNIFLY 81

Query: 337  TCMIAGYAQVGLSNEALNLFVRMIEENLVPRDDTMVSVLSACSSLQIGEIERWERVLIEF 516
              MI G       ++++  F  M  E  +P + T   +L +C+ L   E+      L+  
Sbjct: 82   NTMIRGLVSNNCFHQSIEFFHGMRNEGFLPNNFTFPFLLKSCTRLSDFELGVKAHGLVVK 141

Query: 517  GGPPDCGVEGSSNEKIITVLIYLYGKLGKIEKSRELFDRIVANGGKSLLHWNAMIGGYVQ 696
            GG          +  + T L+  Y + G ++ + ++FD I     K+++ W A+I GY+ 
Sbjct: 142  GG-------FDYDVFVKTGLVCFYARCGFLDDAHQMFDDIPE---KNVVSWTAIITGYID 191

Query: 697  NGLPIEALNVFQLMVAIQASRPNHVTMVSVLSACAQVGNLELGRWVHGYLKSAGSEGVLE 876
             G   EA+++F+  + +  S P+  T+V VLSAC++VG++  G W+HGY    G    + 
Sbjct: 192  FGKFKEAIDLFRRSLEMGLS-PDSFTLVRVLSACSRVGDVSAGEWIHGYAVEMG----IG 246

Query: 877  SNTFLATAFIDMYSKCGSMDMAKEVFDQMVFKDVVSFNAMIMGLAMNGEGEQALMVFSKM 1056
             N F+ T  +DMY+KCG M  A+EVFD+MV KDVVS++AMI G A+NG  ++AL VF  M
Sbjct: 247  RNVFVNTGLVDMYAKCGEMAKAREVFDEMVEKDVVSWSAMIQGYAVNGLPKEALEVFYTM 306

Query: 1057 EELGVHPNGGTFLGVLSACNHSGM--VGEGRRIFLSM--FPSYSIIPELEHYACYVDLLS 1224
            +   V P+  + +GVLSAC+  G   VGE     + M  F S +++         +D+ +
Sbjct: 307  QRENVRPDCYSMVGVLSACSRLGALEVGEWASKLMDMNEFLSNAVLG-----TALIDMYA 361

Query: 1225 RVGHIEEALKVVKSMPVAPNGLIWGALLGGCIAHSRVDIA 1344
            + G +  A ++ K M V  + +IW A+L G   H  V  A
Sbjct: 362  KCGRMVSAWEIFKQMLVKKDRVIWNAVLSGLAMHGYVKSA 401


>ref|XP_006341113.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g08820-like [Solanum tuberosum]
          Length = 687

 Score =  359 bits (922), Expect = 2e-96
 Identities = 202/488 (41%), Positives = 293/488 (60%), Gaps = 1/488 (0%)
 Frame = +1

Query: 7    QPNIFPFNALIRVLSNNLLSFHAFSVFKTLKSRSLSPNDLTFSFFLKACFGFKDARNVQQ 186
            +PNIF +N +IR L +N     + + F  +++    PN+ TF F LK+C    D     +
Sbjct: 75   EPNIFLYNTMIRGLVSNNCFHQSIAYFHGMRNEGFLPNNFTFPFLLKSCTRLSDFELGVK 134

Query: 187  VHTHVVKSGFDGNSSVCNGLLSVYAK-GVRDFKSAHKVFDDMPQRGMAFCWTCMIAGYAQ 363
             H  VVK GFD +  V  GL+  YA+ G  D   AH++FDD+P++ +   WT ++ GY  
Sbjct: 135  AHGLVVKGGFDYDVFVKTGLVCFYARCGFLD--DAHQMFDDIPEKNVV-SWTAIMTGYID 191

Query: 364  VGLSNEALNLFVRMIEENLVPRDDTMVSVLSACSSLQIGEIERWERVLIEFGGPPDCGVE 543
             G   EA+ LF R +E  L P   T+V VLSACS  ++G++   E +   +    D G  
Sbjct: 192  FGKFKEAIGLFRRSLEMGLSPDSFTLVRVLSACS--RVGDVSAGEWIH-RYAVEMDMG-- 246

Query: 544  GSSNEKIITVLIYLYGKLGKIEKSRELFDRIVANGGKSLLHWNAMIGGYVQNGLPIEALN 723
               N  + T L+ +Y K G++ K+RE+FD +V    K ++ W+AMI GY  NGLP EA+ 
Sbjct: 247  --RNVFVNTGLVDMYAKCGEMAKAREVFDEMVE---KDVVSWSAMIQGYAVNGLPKEAME 301

Query: 724  VFQLMVAIQASRPNHVTMVSVLSACAQVGNLELGRWVHGYLKSAGSEGVLESNTFLATAF 903
            VF  M   +  RP+  +MV VLSACA++G LE+G W    +          SN  L TA 
Sbjct: 302  VFYRMQR-ENVRPDCYSMVGVLSACARLGALEVGEWACKLMDM----NEFLSNAVLGTAL 356

Query: 904  IDMYSKCGSMDMAKEVFDQMVFKDVVSFNAMIMGLAMNGEGEQALMVFSKMEELGVHPNG 1083
            IDMY+KCG M  A E+F QM+ KD V +NA++ GLAM+G  + A   F ++E+LG+ PNG
Sbjct: 357  IDMYAKCGRMVSAWEIFKQMLVKDRVIWNAVVSGLAMHGYVKSAFCCFGQVEKLGIKPNG 416

Query: 1084 GTFLGVLSACNHSGMVGEGRRIFLSMFPSYSIIPELEHYACYVDLLSRVGHIEEALKVVK 1263
             TF+G+L AC H+G+V +GR+ F SM   YS+ P +EHY C VDLL R G ++EA  +++
Sbjct: 417  NTFIGLLCACTHAGLVDDGRKYFQSMTHLYSLEPAIEHYGCMVDLLGRAGLLDEAHSLIE 476

Query: 1264 SMPVAPNGLIWGALLGGCIAHSRVDIAQDVASELVEVDPSNPAGYVMLSNVYATDNRWRE 1443
            SMP+  N +IWGALL GC  H    +A+ V  +L+E++P N   YV LSN+YA++N+W +
Sbjct: 477  SMPMKANAVIWGALLSGCRLHRDTKLAEHVLKQLIELEPWNSGNYVHLSNIYASNNKWDD 536

Query: 1444 ILELRGLM 1467
              ++R  M
Sbjct: 537  SEKIRSSM 544



 Score =  178 bits (451), Expect = 6e-42
 Identities = 119/400 (29%), Positives = 207/400 (51%), Gaps = 4/400 (1%)
 Frame = +1

Query: 157  GFKDARNVQQVHTHVVKSGFDGNSSVCNGLLSVYAKGVRDFKSAHKVFDDMPQRGMAFCW 336
            GF+    ++ +H  ++++GFD N+ + N LL        +   A  VF +  Q    F +
Sbjct: 23   GFQSFNQLKHIHARLIRTGFDQNNYLLNLLLKFTLNNFNNPNYAKLVF-NQTQEPNIFLY 81

Query: 337  TCMIAGYAQVGLSNEALNLFVRMIEENLVPRDDTMVSVLSACSSLQIGEIERWERVLIEF 516
              MI G       ++++  F  M  E  +P + T   +L +C+ L   E+      L+  
Sbjct: 82   NTMIRGLVSNNCFHQSIAYFHGMRNEGFLPNNFTFPFLLKSCTRLSDFELGVKAHGLVVK 141

Query: 517  GGPPDCGVEGSSNEKIITVLIYLYGKLGKIEKSRELFDRIVANGGKSLLHWNAMIGGYVQ 696
            GG          +  + T L+  Y + G ++ + ++FD I     K+++ W A++ GY+ 
Sbjct: 142  GG-------FDYDVFVKTGLVCFYARCGFLDDAHQMFDDIPE---KNVVSWTAIMTGYID 191

Query: 697  NGLPIEALNVFQLMVAIQASRPNHVTMVSVLSACAQVGNLELGRWVHGYLKSAGSEGVLE 876
             G   EA+ +F+  + +  S P+  T+V VLSAC++VG++  G W+H Y      E  + 
Sbjct: 192  FGKFKEAIGLFRRSLEMGLS-PDSFTLVRVLSACSRVGDVSAGEWIHRY----AVEMDMG 246

Query: 877  SNTFLATAFIDMYSKCGSMDMAKEVFDQMVFKDVVSFNAMIMGLAMNGEGEQALMVFSKM 1056
             N F+ T  +DMY+KCG M  A+EVFD+MV KDVVS++AMI G A+NG  ++A+ VF +M
Sbjct: 247  RNVFVNTGLVDMYAKCGEMAKAREVFDEMVEKDVVSWSAMIQGYAVNGLPKEAMEVFYRM 306

Query: 1057 EELGVHPNGGTFLGVLSACNHSGMVGEG----RRIFLSMFPSYSIIPELEHYACYVDLLS 1224
            +   V P+  + +GVLSAC   G +  G    + + ++ F S +++         +D+ +
Sbjct: 307  QRENVRPDCYSMVGVLSACARLGALEVGEWACKLMDMNEFLSNAVLG-----TALIDMYA 361

Query: 1225 RVGHIEEALKVVKSMPVAPNGLIWGALLGGCIAHSRVDIA 1344
            + G +  A ++ K M +  + +IW A++ G   H  V  A
Sbjct: 362  KCGRMVSAWEIFKQM-LVKDRVIWNAVVSGLAMHGYVKSA 400


>ref|XP_007203957.1| hypothetical protein PRUPE_ppa022872mg [Prunus persica]
            gi|462399488|gb|EMJ05156.1| hypothetical protein
            PRUPE_ppa022872mg [Prunus persica]
          Length = 714

 Score =  356 bits (914), Expect = 1e-95
 Identities = 196/488 (40%), Positives = 283/488 (57%), Gaps = 5/488 (1%)
 Frame = +1

Query: 10   PNIFPFNALIRVLSNNLLSFHAFSVFKTLKSRSLSPNDLTFSFFLKACFGFKDARNVQQV 189
            PN   +N +IR  S +  S  A   +  +    + PN  TF F LK+C  F  +   +Q+
Sbjct: 96   PNQIIWNTIIRGFSLSSKSIQAVEFYVLMLLSGVEPNSYTFPFLLKSCAKFAASHEGKQI 155

Query: 190  HTHVVKSGFDGNSSVCNGLLSVYAKGVRD-----FKSAHKVFDDMPQRGMAFCWTCMIAG 354
            H HV+K G D ++ V   L+++YA+ V          A  +FD++P R +   W  MI+G
Sbjct: 156  HGHVLKLGLDSDAFVHTSLINMYAQNVLSEMWGCMDDARYLFDEIPGRDVV-SWNAMISG 214

Query: 355  YAQVGLSNEALNLFVRMIEENLVPRDDTMVSVLSACSSLQIGEIERWERVLIEFGGPPDC 534
            YAQ G   EAL LF  M + N+ P + TMV VLSAC+     E+ +W    IE  G    
Sbjct: 215  YAQSGRFEEALALFSEMRKANVSPNESTMVVVLSACAQSGSLELGKWVGSWIENRGL--- 271

Query: 535  GVEGSSNEKIITVLIYLYGKLGKIEKSRELFDRIVANGGKSLLHWNAMIGGYVQNGLPIE 714
                 SN +++  LI +Y K G ++ +R LFD +     + ++ WN MIGGY       E
Sbjct: 272  ----GSNLRLVNALIDMYAKCGALDTARSLFDGLQQ---RDVISWNVMIGGYTHKSHYKE 324

Query: 715  ALNVFQLMVAIQASRPNHVTMVSVLSACAQVGNLELGRWVHGYLKSAGSEGVLESNTFLA 894
            AL +F+LM+   A  PN VT + +L AC+ +G L+LG+W+H Y+          +NT L 
Sbjct: 325  ALALFRLMLRSNAD-PNDVTFLGILPACSHLGALDLGKWIHAYIDKNFQS---LTNTSLW 380

Query: 895  TAFIDMYSKCGSMDMAKEVFDQMVFKDVVSFNAMIMGLAMNGEGEQALMVFSKMEELGVH 1074
            T+ IDMY+KCG+++ AK+VF+ M  K + S+NAMI GLAM+G    AL +FSKM + G  
Sbjct: 381  TSLIDMYAKCGNIEAAKQVFNGMEAKSLASWNAMISGLAMHGHAHTALELFSKMADEGFK 440

Query: 1075 PNGGTFLGVLSACNHSGMVGEGRRIFLSMFPSYSIIPELEHYACYVDLLSRVGHIEEALK 1254
            P+  TF+GVLSACNH G+V  GR+ F SM   Y I  +L+HY C +DLL R G  +EA  
Sbjct: 441  PDEITFVGVLSACNHGGLVDLGRQYFSSMITDYHISAQLQHYGCMIDLLGRAGLFDEAEA 500

Query: 1255 VVKSMPVAPNGLIWGALLGGCIAHSRVDIAQDVASELVEVDPSNPAGYVMLSNVYATDNR 1434
            ++ SM + P+G +WG+LLG C  H RV++ + VA  L E++P N   YV+LSN+YA   R
Sbjct: 501  LMSSMEMKPDGAVWGSLLGACRIHRRVELGELVAKHLFELEPENAGAYVLLSNIYAGAGR 560

Query: 1435 WREILELR 1458
            W ++  +R
Sbjct: 561  WDDVARIR 568



 Score =  189 bits (479), Expect = 4e-45
 Identities = 129/411 (31%), Positives = 206/411 (50%), Gaps = 8/411 (1%)
 Frame = +1

Query: 163  KDARNVQQVHTHVVKSGFDGNSSVCNGLLSVYA-KGVRDFKSAHKVFDDMPQRGMAFCWT 339
            K  +N++QVH H++K+G        + L+   A     D   A  VF  + +      W 
Sbjct: 44   KSMQNLKQVHAHIIKTGLHNTHFALSKLVEFCAISPFGDLSYALLVFQSI-ENPNQIIWN 102

Query: 340  CMIAGYAQVGLSNEALNLFVRMIEENLVPRDDTMVSVLSACSSLQIG-EIERWERVLIEF 516
             +I G++    S +A+  +V M+   + P   T   +L +C+      E ++    +++ 
Sbjct: 103  TIIRGFSLSSKSIQAVEFYVLMLLSGVEPNSYTFPFLLKSCAKFAASHEGKQIHGHVLKL 162

Query: 517  GGPPDCGVEGSSNEKIITVLIYLYGK------LGKIEKSRELFDRIVANGGKSLLHWNAM 678
            G   D  V         T LI +Y +       G ++ +R LFD I    G+ ++ WNAM
Sbjct: 163  GLDSDAFVH--------TSLINMYAQNVLSEMWGCMDDARYLFDEI---PGRDVVSWNAM 211

Query: 679  IGGYVQNGLPIEALNVFQLMVAIQASRPNHVTMVSVLSACAQVGNLELGRWVHGYLKSAG 858
            I GY Q+G   EAL +F  M     S PN  TMV VLSACAQ G+LELG+WV  ++++ G
Sbjct: 212  ISGYAQSGRFEEALALFSEMRKANVS-PNESTMVVVLSACAQSGSLELGKWVGSWIENRG 270

Query: 859  SEGVLESNTFLATAFIDMYSKCGSMDMAKEVFDQMVFKDVVSFNAMIMGLAMNGEGEQAL 1038
                L SN  L  A IDMY+KCG++D A+ +FD +  +DV+S+N MI G       ++AL
Sbjct: 271  ----LGSNLRLVNALIDMYAKCGALDTARSLFDGLQQRDVISWNVMIGGYTHKSHYKEAL 326

Query: 1039 MVFSKMEELGVHPNGGTFLGVLSACNHSGMVGEGRRIFLSMFPSYSIIPELEHYACYVDL 1218
             +F  M      PN  TFLG+L AC+H G +  G+ I   +  ++  +     +   +D+
Sbjct: 327  ALFRLMLRSNADPNDVTFLGILPACSHLGALDLGKWIHAYIDKNFQSLTNTSLWTSLIDM 386

Query: 1219 LSRVGHIEEALKVVKSMPVAPNGLIWGALLGGCIAHSRVDIAQDVASELVE 1371
             ++ G+IE A +V   M  A +   W A++ G   H     A ++ S++ +
Sbjct: 387  YAKCGNIEAAKQVFNGME-AKSLASWNAMISGLAMHGHAHTALELFSKMAD 436



 Score = 70.5 bits (171), Expect = 2e-09
 Identities = 48/157 (30%), Positives = 83/157 (52%), Gaps = 2/157 (1%)
 Frame = +1

Query: 1   LFQPNIFPFNALIRVLSNNLLSFHAFSVFKTLKSRSLSPNDLTFSFFLKACFGFKDARNV 180
           L Q ++  +N +I   ++      A ++F+ +   +  PND+TF   L AC         
Sbjct: 301 LQQRDVISWNVMIGGYTHKSHYKEALALFRLMLRSNADPNDVTFLGILPACSHLGALDLG 360

Query: 181 QQVHTHVVKSGFDG--NSSVCNGLLSVYAKGVRDFKSAHKVFDDMPQRGMAFCWTCMIAG 354
           + +H ++ K+ F    N+S+   L+ +YAK   + ++A +VF+ M  + +A  W  MI+G
Sbjct: 361 KWIHAYIDKN-FQSLTNTSLWTSLIDMYAK-CGNIEAAKQVFNGMEAKSLA-SWNAMISG 417

Query: 355 YAQVGLSNEALNLFVRMIEENLVPRDDTMVSVLSACS 465
            A  G ++ AL LF +M +E   P + T V VLSAC+
Sbjct: 418 LAMHGHAHTALELFSKMADEGFKPDEITFVGVLSACN 454


>ref|XP_006429514.1| hypothetical protein CICLE_v10011209mg [Citrus clementina]
            gi|568855070|ref|XP_006481133.1| PREDICTED: putative
            pentatricopeptide repeat-containing protein
            At3g08820-like [Citrus sinensis]
            gi|557531571|gb|ESR42754.1| hypothetical protein
            CICLE_v10011209mg [Citrus clementina]
          Length = 688

 Score =  355 bits (912), Expect = 2e-95
 Identities = 189/487 (38%), Positives = 287/487 (58%)
 Frame = +1

Query: 7    QPNIFPFNALIRVLSNNLLSFHAFSVFKTLKSRSLSPNDLTFSFFLKACFGFKDARNVQQ 186
            +PNIF +N +IR   +N    HA   + ++++    P + TF F LKAC    D +   +
Sbjct: 76   EPNIFLYNTMIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVR 135

Query: 187  VHTHVVKSGFDGNSSVCNGLLSVYAKGVRDFKSAHKVFDDMPQRGMAFCWTCMIAGYAQV 366
             H+ +VK+G D +  V   LL++Y         A KVFDD+P + +   WT +I+GY   
Sbjct: 136  SHSLIVKAGLDCDEFVKTSLLNLYVH-CGYLADALKVFDDIPDKNVV-SWTAIISGYINE 193

Query: 367  GLSNEALNLFVRMIEENLVPRDDTMVSVLSACSSLQIGEIERWERVLIEFGGPPDCGVEG 546
            G   EA+N+F R++   L P   ++V VL+AC+ L      +W    +   G        
Sbjct: 194  GNLEEAINMFRRLLHRGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGM------- 246

Query: 547  SSNEKIITVLIYLYGKLGKIEKSRELFDRIVANGGKSLLHWNAMIGGYVQNGLPIEALNV 726
              N  + T L+ LY K G +EK+R +FD++     K ++ W++MI GY  NG P EAL++
Sbjct: 247  GRNVFVATSLVDLYAKCGNMEKARRVFDQMPE---KDIVSWSSMIQGYASNGFPKEALDM 303

Query: 727  FQLMVAIQASRPNHVTMVSVLSACAQVGNLELGRWVHGYLKSAGSEGVLESNTFLATAFI 906
            F  M   +  +P+  TMV VLSACA +G LELG W   +++         SN  L T  I
Sbjct: 304  FYNMQR-ENLKPDRYTMVGVLSACASLGALELGVWASSFME----RNEFLSNPVLGTTLI 358

Query: 907  DMYSKCGSMDMAKEVFDQMVFKDVVSFNAMIMGLAMNGEGEQALMVFSKMEELGVHPNGG 1086
            DMY+KCG M  A +VF +M  KD V +NA++ GL+MNG  + A  VF ++E+ G+ PNG 
Sbjct: 359  DMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGN 418

Query: 1087 TFLGVLSACNHSGMVGEGRRIFLSMFPSYSIIPELEHYACYVDLLSRVGHIEEALKVVKS 1266
            TF+G+L  C H+G+V EGR+ F SM   +S+ P +EHY C VDLL R G ++EA +++KS
Sbjct: 419  TFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKS 478

Query: 1267 MPVAPNGLIWGALLGGCIAHSRVDIAQDVASELVEVDPSNPAGYVMLSNVYATDNRWREI 1446
            MP+ PN ++WGALL GC  H + D+A+ V ++L+ ++P N   YV+LSN+Y+  ++W + 
Sbjct: 479  MPMEPNAIVWGALLAGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDA 538

Query: 1447 LELRGLM 1467
             ++R +M
Sbjct: 539  AKIRSMM 545



 Score =  178 bits (452), Expect = 5e-42
 Identities = 123/408 (30%), Positives = 217/408 (53%), Gaps = 5/408 (1%)
 Frame = +1

Query: 157  GFKDARNVQQVHTHVVKSGFDGNSSVCNGLL-SVYAKGVRDFKSAHKVFDDMPQRGMAFC 333
            GF   + ++ VH  +++ G D +S + N LL S +  G  ++   H +F    +  + F 
Sbjct: 25   GFNSIKQLKYVHAILLRVGLDQDSYLLNLLLRSCFHFGQTNY--THLIFSQTKEPNI-FL 81

Query: 334  WTCMIAGYAQVGLSNEALNLFVRMIEENLVPRDDTMVSVLSACS---SLQIGEIERWERV 504
            +  MI G+        A+  +  M  E  +P + T   VL AC+     Q+G   R   +
Sbjct: 82   YNTMIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLG--VRSHSL 139

Query: 505  LIEFGGPPDCGVEGSSNEKIITVLIYLYGKLGKIEKSRELFDRIVANGGKSLLHWNAMIG 684
            +++ G   DC      +E + T L+ LY   G +  + ++FD I     K+++ W A+I 
Sbjct: 140  IVKAG--LDC------DEFVKTSLLNLYVHCGYLADALKVFDDI---PDKNVVSWTAIIS 188

Query: 685  GYVQNGLPIEALNVFQLMVAIQASRPNHVTMVSVLSACAQVGNLELGRWVHGYLKSAGSE 864
            GY+  G   EA+N+F+ ++  +  +P+  ++V VL+AC Q+G+L   +W+HGY+  AG  
Sbjct: 189  GYINEGNLEEAINMFRRLLH-RGLKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAG-- 245

Query: 865  GVLESNTFLATAFIDMYSKCGSMDMAKEVFDQMVFKDVVSFNAMIMGLAMNGEGEQALMV 1044
              +  N F+AT+ +D+Y+KCG+M+ A+ VFDQM  KD+VS+++MI G A NG  ++AL +
Sbjct: 246  --MGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDM 303

Query: 1045 FSKMEELGVHPNGGTFLGVLSACNHSGMVGEGRRIFLSMFPSYS-IIPELEHYACYVDLL 1221
            F  M+   + P+  T +GVLSAC   G +  G  ++ S F   +  +         +D+ 
Sbjct: 304  FYNMQRENLKPDRYTMVGVLSACASLGALELG--VWASSFMERNEFLSNPVLGTTLIDMY 361

Query: 1222 SRVGHIEEALKVVKSMPVAPNGLIWGALLGGCIAHSRVDIAQDVASEL 1365
            ++ G + +A KV + M    + ++W A++ G   +  V +A  V  +L
Sbjct: 362  AKCGRMAQACKVFREMK-DKDQVVWNAVVSGLSMNGYVKVAFGVFGQL 408


>ref|XP_002323645.2| pentatricopeptide repeat-containing family protein [Populus
            trichocarpa] gi|550321449|gb|EEF05406.2|
            pentatricopeptide repeat-containing family protein
            [Populus trichocarpa]
          Length = 682

 Score =  354 bits (909), Expect = 5e-95
 Identities = 202/491 (41%), Positives = 299/491 (60%), Gaps = 4/491 (0%)
 Frame = +1

Query: 7    QPNIFPFNALIRVLSNNLLSFHAFSVFKTLKSRSLSPNDLTFSFFLKACFGFKDARNVQQ 186
            +PNIF FN +IR L  N     +  ++ +++   LSP+  TF F LKAC    D+    +
Sbjct: 70   EPNIFLFNTMIRGLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVK 129

Query: 187  VHTHVVKSGFDGNSSVCNGLLSVYAK-GVRDFKSAHKVFDDMPQRGMAFCWTCMIAGYAQ 363
            +H+ VVK+G + ++ V   L+++Y K G  D  +A KVFDD+P +  A  WT  I+GY  
Sbjct: 130  MHSLVVKAGCEADAFVKISLINLYTKCGFID--NAFKVFDDIPDKNFA-SWTATISGYVG 186

Query: 364  VGLSNEALNLFVRMIEENLVPRDDTMVSVLSACS---SLQIGEIERWERVLIEFGGPPDC 534
            VG   EA+++F R++E  L P   ++V VLSAC     L+ GE   W    I   G    
Sbjct: 187  VGKCREAIDMFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSGE---WIDEYITENGM--- 240

Query: 535  GVEGSSNEKIITVLIYLYGKLGKIEKSRELFDRIVANGGKSLLHWNAMIGGYVQNGLPIE 714
                + N  + T L+  YGK G +E++R +FD ++    K+++ W++MI GY  NGLP E
Sbjct: 241  ----ARNVFVATALVDFYGKCGNMERARSVFDGMLE---KNIVSWSSMIQGYASNGLPKE 293

Query: 715  ALNVFQLMVAIQASRPNHVTMVSVLSACAQVGNLELGRWVHGYLKSAGSEGVLESNTFLA 894
            AL++F  M+  +  +P+   MV VL +CA++G LELG W    +   G+E +   N+ L 
Sbjct: 294  ALDLFFKMLN-EGLKPDCYAMVGVLCSCARLGALELGDWASNLIN--GNEFL--DNSVLG 348

Query: 895  TAFIDMYSKCGSMDMAKEVFDQMVFKDVVSFNAMIMGLAMNGEGEQALMVFSKMEELGVH 1074
            TA IDMY+KCG MD A EVF  M  KD V +NA I GLAM+G  + AL +F +ME+ G+ 
Sbjct: 349  TALIDMYAKCGRMDRAWEVFRGMRKKDRVVWNAAISGLAMSGHVKDALGLFGQMEKSGIK 408

Query: 1075 PNGGTFLGVLSACNHSGMVGEGRRIFLSMFPSYSIIPELEHYACYVDLLSRVGHIEEALK 1254
            P+  TF+G+L AC H+G+V EGRR F SM   Y++ PE+EHY C VDLL R G ++EA +
Sbjct: 409  PDRNTFVGLLCACTHAGLVEEGRRYFNSMECVYTLTPEIEHYGCMVDLLGRAGCLDEAHQ 468

Query: 1255 VVKSMPVAPNGLIWGALLGGCIAHSRVDIAQDVASELVEVDPSNPAGYVMLSNVYATDNR 1434
            ++KSMP+  N ++WGALLGGC  H    + + V  +L+ ++P +   YV+LSN+YA  ++
Sbjct: 469  LIKSMPMEANAIVWGALLGGCRLHRDTQLVEVVLKKLIALEPWHSGNYVLLSNIYAASHK 528

Query: 1435 WREILELRGLM 1467
            W E  ++R +M
Sbjct: 529  WEEAAKIRSIM 539



 Score =  154 bits (389), Expect = 1e-34
 Identities = 111/391 (28%), Positives = 201/391 (51%), Gaps = 5/391 (1%)
 Frame = +1

Query: 157  GFKDARNVQQVHTHVVKSGFDGNSSVCNGLLSVYAKGVRDFKSAHKVFDDMPQRGMAFCW 336
            GF   ++++ +H  +++ G D ++ + N +L  ++    +   + ++ D   +  + F +
Sbjct: 19   GFSCLKHLKHIHAALLRLGLDEDTYLLNKVLR-FSFNFGNTNYSFRILDQTKEPNI-FLF 76

Query: 337  TCMIAGYAQVGLSNEALNLFVRMIEENLVPRDDTMVSVLSACSSLQIGEI-ERWERVLIE 513
              MI G        E++ ++  M +E L P   T   VL AC+ +   E+  +   ++++
Sbjct: 77   NTMIRGLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVK 136

Query: 514  FGGPPDCGVEGSSNEKIITVLIYLYGKLGKIEKSRELFDRIVANGGKSLLHWNAMIGGYV 693
             G   D  V+ S        LI LY K G I+ + ++FD I     K+   W A I GYV
Sbjct: 137  AGCEADAFVKIS--------LINLYTKCGFIDNAFKVFDDI---PDKNFASWTATISGYV 185

Query: 694  QNGLPIEALNVFQLMVAIQASRPNHVTMVSVLSACAQVGNLELGRWVHGYLKSAGSEGVL 873
              G   EA+++F+ ++ +   RP+  ++V VLSAC + G+L  G W+  Y+    +E  +
Sbjct: 186  GVGKCREAIDMFRRLLEM-GLRPDSFSLVEVLSACKRTGDLRSGEWIDEYI----TENGM 240

Query: 874  ESNTFLATAFIDMYSKCGSMDMAKEVFDQMVFKDVVSFNAMIMGLAMNGEGEQALMVFSK 1053
              N F+ATA +D Y KCG+M+ A+ VFD M+ K++VS+++MI G A NG  ++AL +F K
Sbjct: 241  ARNVFVATALVDFYGKCGNMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFK 300

Query: 1054 MEELGVHPNGGTFLGVLSACNHSGMVGEG----RRIFLSMFPSYSIIPELEHYACYVDLL 1221
            M   G+ P+    +GVL +C   G +  G      I  + F   S++         +D+ 
Sbjct: 301  MLNEGLKPDCYAMVGVLCSCARLGALELGDWASNLINGNEFLDNSVLG-----TALIDMY 355

Query: 1222 SRVGHIEEALKVVKSMPVAPNGLIWGALLGG 1314
            ++ G ++ A +V + M    + ++W A + G
Sbjct: 356  AKCGRMDRAWEVFRGMR-KKDRVVWNAAISG 385


>ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like
            [Cucumis sativus] gi|449529868|ref|XP_004171920.1|
            PREDICTED: pentatricopeptide repeat-containing protein
            At1g08070-like [Cucumis sativus]
          Length = 734

 Score =  354 bits (909), Expect = 5e-95
 Identities = 198/514 (38%), Positives = 299/514 (58%), Gaps = 30/514 (5%)
 Frame = +1

Query: 7    QPNIFPFNALIRVLSNNLLSFHAFSVFKTLKSRSLSPNDLTFSFFLKACFGFKDARNVQQ 186
            +PN+F +N++IR LS +L    A   F  +    + PN  TF F LK+C     A   +Q
Sbjct: 91   EPNLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQ 150

Query: 187  VHTHVVKSGFDGNSSVCNGLLSVYAKG--------------VRDFKS------------- 285
            +H HV+K GF  +  +   L+++YA+                RD  S             
Sbjct: 151  IHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGY 210

Query: 286  ---AHKVFDDMPQRGMAFCWTCMIAGYAQVGLSNEALNLFVRMIEENLVPRDDTMVSVLS 456
               A ++FD+MP + +   W  MIAGYAQ+G S EAL LF  M + N+ P + T+VSVLS
Sbjct: 211  MDRARQLFDEMPVKDVV-SWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLS 269

Query: 457  ACSSLQIGEIERWERVLIEFGGPPDCGVEGSSNEKIITVLIYLYGKLGKIEKSRELFDRI 636
            AC+     ++    R  IE     D G+   SN K++  LI +Y K G ++ +RELFD +
Sbjct: 270  ACAQSNALDLGNSMRSWIE-----DRGL--CSNLKLVNALIDMYSKCGDLQTARELFDDM 322

Query: 637  VANGGKSLLHWNAMIGGYVQNGLPIEALNVFQLMVAIQASRPNHVTMVSVLSACAQVGNL 816
            +    + ++ WN MIGGY       EAL +F+ M+A     P  +T +S+L +CA +G +
Sbjct: 323  LE---RDVISWNVMIGGYTHMCSYKEALALFREMLA-SGVEPTEITFLSILPSCAHLGAI 378

Query: 817  ELGRWVHGYLKSAGSEGVLESNTFLATAFIDMYSKCGSMDMAKEVFDQMVFKDVVSFNAM 996
            +LG+W+H Y+    ++     +T L+T+ ID+Y+KCG++  A++VFD M  K + S+NAM
Sbjct: 379  DLGKWIHAYI----NKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAM 434

Query: 997  IMGLAMNGEGEQALMVFSKMEELGVHPNGGTFLGVLSACNHSGMVGEGRRIFLSMFPSYS 1176
            I GLAM+G+ ++A  +FSKM   G+ PN  TF+G+LSAC H+G+V  G++ F SM   Y 
Sbjct: 435  ICGLAMHGQADKAFELFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYK 494

Query: 1177 IIPELEHYACYVDLLSRVGHIEEALKVVKSMPVAPNGLIWGALLGGCIAHSRVDIAQDVA 1356
            I P+ +HY C +DLL R G  EEA  ++++M V P+G IWG+LLG C  H RV++ + VA
Sbjct: 495  ISPKSQHYGCMIDLLGRAGLFEEAESLLQNMEVKPDGAIWGSLLGACRDHGRVELGELVA 554

Query: 1357 SELVEVDPSNPAGYVMLSNVYATDNRWREILELR 1458
              L E++P NP  YV+LSN+YA   +W ++  +R
Sbjct: 555  ERLFELEPDNPGAYVLLSNIYAGAGKWDDVARIR 588



 Score =  169 bits (428), Expect = 3e-39
 Identities = 130/433 (30%), Positives = 208/433 (48%), Gaps = 25/433 (5%)
 Frame = +1

Query: 142  LKACFGFKDARNVQQVHTHVVKSGFDGNSSVCNGLLSVYA-KGVRDFKSAHKVFDDMPQR 318
            LK     +  R  +Q+H H++K+G        + L+   A     D   A  +F+ + + 
Sbjct: 33   LKLLSKCQSIRTFKQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSIEEP 92

Query: 319  GMAFCWTCMIAGYAQVGLSNEALNLFVRMIEENLVPRDDTMVSVLSACSSL-QIGEIERW 495
             + F W  MI G +       AL  FVRMI   + P   T   +L +C+ L    E ++ 
Sbjct: 93   NL-FIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQI 151

Query: 496  ERVLIEFGGPPDCGVEGS-----------SNEKII------------TVLIYLYGKLGKI 606
               +++ G   D  +  S           +N +++            T LI  Y   G +
Sbjct: 152  HAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYM 211

Query: 607  EKSRELFDRIVANGGKSLLHWNAMIGGYVQNGLPIEALNVFQLMVAIQASRPNHVTMVSV 786
            +++R+LFD +     K ++ WNAMI GY Q G   EAL +F+ M       PN  T+VSV
Sbjct: 212  DRARQLFDEMPV---KDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVP-PNESTIVSV 267

Query: 787  LSACAQVGNLELGRWVHGYLKSAGSEGVLESNTFLATAFIDMYSKCGSMDMAKEVFDQMV 966
            LSACAQ   L+LG  +  +++  G    L SN  L  A IDMYSKCG +  A+E+FD M+
Sbjct: 268  LSACAQSNALDLGNSMRSWIEDRG----LCSNLKLVNALIDMYSKCGDLQTARELFDDML 323

Query: 967  FKDVVSFNAMIMGLAMNGEGEQALMVFSKMEELGVHPNGGTFLGVLSACNHSGMVGEGRR 1146
             +DV+S+N MI G       ++AL +F +M   GV P   TFL +L +C H G +  G+ 
Sbjct: 324  ERDVISWNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKW 383

Query: 1147 IFLSMFPSYSIIPELEHYACYVDLLSRVGHIEEALKVVKSMPVAPNGLIWGALLGGCIAH 1326
            I   +  +++ +         +DL ++ G+I  A +V   M +  +   W A++ G   H
Sbjct: 384  IHAYINKNFNSV-STSLSTSLIDLYAKCGNIVAARQVFDGMKI-KSLASWNAMICGLAMH 441

Query: 1327 SRVDIAQDVASEL 1365
             + D A ++ S++
Sbjct: 442  GQADKAFELFSKM 454


>gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
          Length = 710

 Score =  353 bits (906), Expect = 1e-94
 Identities = 201/523 (38%), Positives = 304/523 (58%), Gaps = 36/523 (6%)
 Frame = +1

Query: 7    QPNIFPFNALIR--VLSNNLLSFHAFSVFKTLKSRSLSPNDLTFSFFLKACFGFKDARNV 180
            +PN+  +N + R   LS++ +S  A  ++  + S  L PN  TF F LK+C   K ++  
Sbjct: 65   EPNLLIWNTMFRGHALSSDPVS--AIKLYVCMISLGLLPNSYTFPFLLKSCAKLKVSKEG 122

Query: 181  QQVHTHVVKSGFDGNSSVCNGLLSVYAKGVRDFKSAHKVFDDMPQRGMA----------- 327
            QQ+H HV+K G++ +  V   L+S+Y K  R +K AHKVFD    R +            
Sbjct: 123  QQIHGHVLKLGYELDLYVHTSLISMYVKNGR-WKDAHKVFDGSSHRDVVSYTALITGYAS 181

Query: 328  -------------------FCWTCMIAGYAQVGLSNEALNLFVRMIEENLVPRDDTMVSV 450
                                 W  +I+GYA  G + EAL+LF  M++ N+ P + TMV+V
Sbjct: 182  RGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTV 241

Query: 451  LSACS---SLQIG-EIERWERVLIEFGGPPDCGVEGSSNEKIITVLIYLYGKLGKIEKSR 618
            +SAC+   S+Q+G ++  W           D G+   SN KI+  LI LY K G++E + 
Sbjct: 242  VSACAQSGSIQLGRQVHSWI---------DDHGL--GSNLKIVNALIDLYSKCGEVETAC 290

Query: 619  ELFDRIVANGGKSLLHWNAMIGGYVQNGLPIEALNVFQLMVAIQASRPNHVTMVSVLSAC 798
             LF  +     K ++ WN MIGGY    L  EAL +FQ M+      PN VTM+S+L AC
Sbjct: 291  GLFQGL---SNKDVISWNTMIGGYTHLNLYKEALLLFQEMLR-SGENPNDVTMLSILPAC 346

Query: 799  AQVGNLELGRWVHGYLKSAGSEGVLESNTFLATAFIDMYSKCGSMDMAKEVFDQMVFKDV 978
            AQ+G ++ GRW+H Y+     +GV  +++ L T+ IDMY+KCG ++ A +VF+ M  + +
Sbjct: 347  AQLGAIDFGRWIHVYIDKR-IKGVTNASS-LRTSLIDMYAKCGDIEAAHQVFNSMHHRTL 404

Query: 979  VSFNAMIMGLAMNGEGEQALMVFSKMEELGVHPNGGTFLGVLSACNHSGMVGEGRRIFLS 1158
             + NAMI G AM+G    A  +FS+M + G+ P+  TF+G+LSAC+HSGM+  GRRIF S
Sbjct: 405  SACNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRRIFRS 464

Query: 1159 MFPSYSIIPELEHYACYVDLLSRVGHIEEALKVVKSMPVAPNGLIWGALLGGCIAHSRVD 1338
            M  +Y I P+LEHY C +DLL  +G  +EA +++ +M + P+G+IW +LL  C  H  V+
Sbjct: 465  MTQNYKITPKLEHYGCMIDLLGHLGLFKEAEEMINTMTMEPDGVIWCSLLKACKMHGNVE 524

Query: 1339 IAQDVASELVEVDPSNPAGYVMLSNVYATDNRWREILELRGLM 1467
            + +  A +L++++P NP  YV+LSN+YAT  RW E+  +R L+
Sbjct: 525  LGESFAQKLIKIEPENPGSYVLLSNIYATAGRWNEVANIRALL 567



 Score = 75.9 bits (185), Expect = 4e-11
 Identities = 73/279 (26%), Positives = 114/279 (40%), Gaps = 4/279 (1%)
 Frame = +1

Query: 1   LFQPNIFPFNALIRVLSNNLLSFHAFSVFKTLKSRSLSPNDLTFSFFLKACFGFKDARNV 180
           L   ++  +N +I   ++  L   A  +F+ +     +PND+T    L AC         
Sbjct: 296 LSNKDVISWNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFG 355

Query: 181 QQVHTHVVK--SGFDGNSSVCNGLLSVYAKGVRDFKSAHKVFDDMPQRGMAFCWTCMIAG 354
           + +H ++ K   G    SS+   L+ +YAK   D ++AH+VF+ M  R ++ C   MI G
Sbjct: 356 RWIHVYIDKRIKGVTNASSLRTSLIDMYAK-CGDIEAAHQVFNSMHHRTLSAC-NAMIFG 413

Query: 355 YAQVGLSNEALNLFVRMIEENLVPRDDTMVSVLSACSSLQIGEIERWERVLIEFGGPPDC 534
           +A  G +N A ++F RM +  + P D T V +LSACS                       
Sbjct: 414 FAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACS----------------------- 450

Query: 535 GVEGSSNEKIITVLIYLYGKLGKIEKSRELFDRIVANG--GKSLLHWNAMIGGYVQNGLP 708
                                G ++  R +F  +  N      L H+  MI      GL 
Sbjct: 451 -------------------HSGMLDLGRRIFRSMTQNYKITPKLEHYGCMIDLLGHLGLF 491

Query: 709 IEALNVFQLMVAIQASRPNHVTMVSVLSACAQVGNLELG 825
            EA    + M+      P+ V   S+L AC   GN+ELG
Sbjct: 492 KEA----EEMINTMTMEPDGVIWCSLLKACKMHGNVELG 526