BLASTX nr result

ID: Sinomenium21_contig00033232 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00033232
         (477 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512513.1| hypothetical protein RCOM_1435290 [Ricinus c...    57   4e-06
ref|XP_004302236.1| PREDICTED: RNA polymerase II-associated prot...    56   5e-06

>ref|XP_002512513.1| hypothetical protein RCOM_1435290 [Ricinus communis]
           gi|223548474|gb|EEF49965.1| hypothetical protein
           RCOM_1435290 [Ricinus communis]
          Length = 237

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 27/38 (71%), Positives = 30/38 (78%)
 Frame = +1

Query: 1   LSAADKADLHKLWEEVFSNEAIPIECADTLSKLRAKYC 114
           LSAADKADL KLW+EVF +EA PIE A+ L  LR KYC
Sbjct: 198 LSAADKADLLKLWDEVFCSEATPIEHAEILDNLRTKYC 235


>ref|XP_004302236.1| PREDICTED: RNA polymerase II-associated protein 3-like [Fragaria
           vesca subsp. vesca]
          Length = 407

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 26/38 (68%), Positives = 30/38 (78%)
 Frame = +1

Query: 1   LSAADKADLHKLWEEVFSNEAIPIECADTLSKLRAKYC 114
           LS+ DKADL K+W+EVF NEA PIE A+ L  LRAKYC
Sbjct: 367 LSSNDKADLAKIWDEVFYNEATPIEFAEKLDNLRAKYC 404


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