BLASTX nr result
ID: Sinomenium21_contig00032997
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00032997
(1492 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002285868.1| PREDICTED: replication factor C subunit 5 [V... 602 e-169
ref|XP_006472809.1| PREDICTED: replication factor C subunit 3-li... 596 e-167
ref|XP_006434237.1| hypothetical protein CICLE_v10001597mg [Citr... 594 e-167
ref|XP_003526636.1| PREDICTED: replication factor C subunit 3-li... 592 e-166
ref|XP_002520343.1| replication factor C / DNA polymerase III ga... 587 e-165
gb|EXB60106.1| Replication factor C subunit 5 [Morus notabilis] ... 585 e-164
ref|XP_003523440.1| PREDICTED: replication factor C subunit 3-li... 584 e-164
ref|XP_002302226.1| replication factor C 36 kDA family protein [... 584 e-164
ref|XP_004502480.1| PREDICTED: replication factor C subunit 5-li... 581 e-163
ref|XP_003602039.1| Replication factor C subunit [Medicago trunc... 580 e-163
ref|XP_004502481.1| PREDICTED: replication factor C subunit 5-li... 576 e-162
ref|NP_001048280.1| Os02g0775200 [Oryza sativa Japonica Group] g... 575 e-161
ref|XP_003570529.1| PREDICTED: replication factor C subunit 5-li... 571 e-160
dbj|BAB16439.1| replication factor C 36kDa subunit [Oryza sativa... 571 e-160
ref|XP_007137424.1| hypothetical protein PHAVU_009G126000g [Phas... 569 e-159
ref|XP_004242038.1| PREDICTED: replication factor C subunit 5-li... 569 e-159
dbj|BAK01840.1| predicted protein [Hordeum vulgare subsp. vulgar... 569 e-159
ref|XP_006365532.1| PREDICTED: replication factor C subunit 3-li... 568 e-159
gb|ACG35868.1| replication factor C subunit 3 [Zea mays] 568 e-159
ref|XP_006856708.1| hypothetical protein AMTR_s00054p00174840 [A... 567 e-159
>ref|XP_002285868.1| PREDICTED: replication factor C subunit 5 [Vitis vinifera]
gi|302141794|emb|CBI18997.3| unnamed protein product
[Vitis vinifera]
Length = 360
Score = 602 bits (1553), Expect = e-169
Identities = 309/360 (85%), Positives = 331/360 (91%), Gaps = 2/360 (0%)
Frame = -3
Query: 1373 MAESTAPMEIDSSVEPSMP-NKGKSVIVAAS-EAKATPWVEKYRPQSLADVAAHRDIVDT 1200
MAE+ M+ID + NKGKSV+V + KATPWVEKYRPQSLADVAAHRDIVDT
Sbjct: 1 MAEAVTVMDIDEEDNHLLKANKGKSVVVGGPPDRKATPWVEKYRPQSLADVAAHRDIVDT 60
Query: 1199 IDRLTSENKLPHLLLYGPPGTGKTSTILAVARKLYGAQFHNMILELNASDDRGIDVVRQQ 1020
IDRLTSEN+LPHLLLYGPPGTGKTSTILAVARKLYG QFHNMILELNASDDRGIDVVRQQ
Sbjct: 61 IDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGEQFHNMILELNASDDRGIDVVRQQ 120
Query: 1019 IQNFASTQSFSFGVKSPVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHVNKI 840
IQ+FASTQSFSFG KS VKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHVNKI
Sbjct: 121 IQDFASTQSFSFGAKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHVNKI 180
Query: 839 IPALQSRCTRFRFAPLDATHVTERLKHVIDAEGLNVDDSGLTALVRLSNGDMRKALNILQ 660
IPALQSRCTRFRFAPLDA HVTERLKHVI+AE L+V +SGL ALVRLS+GDMRKALNILQ
Sbjct: 181 IPALQSRCTRFRFAPLDAVHVTERLKHVINAEKLDVSESGLAALVRLSSGDMRKALNILQ 240
Query: 659 STHMASQHITEEAVYLCTGNPMPKDIEQISYWLLNESFATSFRSISDMKMRKGLALVDIV 480
STHMASQ ITEEAVYLCTGNP+PKDIEQISYWLLNESFA SF IS++KMRKGLALVD+V
Sbjct: 241 STHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNESFAASFDRISEVKMRKGLALVDVV 300
Query: 479 REVTMFIFRIKMPSDARVHLINDLADIEYRLSFGCNDKLQLGSLLSAFTRARSAIVAAAK 300
REVTMF+F+IKMPSD RV LINDLADIEYRLSFGCNDKLQLGSL+++FTRAR+A+VAAAK
Sbjct: 301 REVTMFVFKIKMPSDVRVQLINDLADIEYRLSFGCNDKLQLGSLIASFTRARAALVAAAK 360
>ref|XP_006472809.1| PREDICTED: replication factor C subunit 3-like [Citrus sinensis]
Length = 364
Score = 596 bits (1536), Expect = e-167
Identities = 305/361 (84%), Positives = 332/361 (91%), Gaps = 4/361 (1%)
Frame = -3
Query: 1370 AESTAPMEIDSSVEPSMPNK--GKSVIVAAS--EAKATPWVEKYRPQSLADVAAHRDIVD 1203
AE+ + M+ID ++ K GK+VIV+ + + KA+PWVEKYRPQSLADVAAHRDIVD
Sbjct: 4 AETVSLMDIDEDENKNLKPKDNGKNVIVSGTPPDIKASPWVEKYRPQSLADVAAHRDIVD 63
Query: 1202 TIDRLTSENKLPHLLLYGPPGTGKTSTILAVARKLYGAQFHNMILELNASDDRGIDVVRQ 1023
TIDRLTSEN+LPHLLLYGPPGTGKTSTILAVARKLYGAQ+HNMILELNASDDRGIDVVRQ
Sbjct: 64 TIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVVRQ 123
Query: 1022 QIQNFASTQSFSFGVKSPVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHVNK 843
QIQ+FASTQSFSFGVK+ VKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICN VNK
Sbjct: 124 QIQDFASTQSFSFGVKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNQVNK 183
Query: 842 IIPALQSRCTRFRFAPLDATHVTERLKHVIDAEGLNVDDSGLTALVRLSNGDMRKALNIL 663
IIPALQSRCTRFRFAPL+ HVTERLKHVI+AEGL+V + GL ALVRL NGDMRKALNIL
Sbjct: 184 IIPALQSRCTRFRFAPLEPVHVTERLKHVIEAEGLDVTEGGLAALVRLCNGDMRKALNIL 243
Query: 662 QSTHMASQHITEEAVYLCTGNPMPKDIEQISYWLLNESFATSFRSISDMKMRKGLALVDI 483
QSTHMASQ ITEEAVYLCTGNP+PKDIEQISYWLLNESFA SF+ IS+MKMRKGLALVDI
Sbjct: 244 QSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNESFADSFKRISEMKMRKGLALVDI 303
Query: 482 VREVTMFIFRIKMPSDARVHLINDLADIEYRLSFGCNDKLQLGSLLSAFTRARSAIVAAA 303
VREVTMF+F+IKMPSD RV L+NDLADIEYRLSFGCNDKLQLGS++S FT+ARSAIVAAA
Sbjct: 304 VREVTMFVFKIKMPSDVRVRLMNDLADIEYRLSFGCNDKLQLGSIISTFTQARSAIVAAA 363
Query: 302 K 300
K
Sbjct: 364 K 364
>ref|XP_006434237.1| hypothetical protein CICLE_v10001597mg [Citrus clementina]
gi|557536359|gb|ESR47477.1| hypothetical protein
CICLE_v10001597mg [Citrus clementina]
Length = 364
Score = 594 bits (1532), Expect = e-167
Identities = 304/361 (84%), Positives = 331/361 (91%), Gaps = 4/361 (1%)
Frame = -3
Query: 1370 AESTAPMEIDSSVEPSMPNK--GKSVIVAAS--EAKATPWVEKYRPQSLADVAAHRDIVD 1203
AE+ + M+ D ++ K GK+VIV+ + + KA+PWVEKYRPQSLADVAAHRDIVD
Sbjct: 4 AETVSLMDFDEDENQNLKPKDNGKNVIVSGTPPDIKASPWVEKYRPQSLADVAAHRDIVD 63
Query: 1202 TIDRLTSENKLPHLLLYGPPGTGKTSTILAVARKLYGAQFHNMILELNASDDRGIDVVRQ 1023
TIDRLTSEN+LPHLLLYGPPGTGKTSTILAVARKLYGAQ+HNMILELNASDDRGIDVVRQ
Sbjct: 64 TIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVVRQ 123
Query: 1022 QIQNFASTQSFSFGVKSPVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHVNK 843
QIQ+FASTQSFSFGVK+ VKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICN VNK
Sbjct: 124 QIQDFASTQSFSFGVKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNQVNK 183
Query: 842 IIPALQSRCTRFRFAPLDATHVTERLKHVIDAEGLNVDDSGLTALVRLSNGDMRKALNIL 663
IIPALQSRCTRFRFAPL+ HVTERLKHVI+AEGL+V + GL ALVRL NGDMRKALNIL
Sbjct: 184 IIPALQSRCTRFRFAPLEPVHVTERLKHVIEAEGLDVTEGGLAALVRLCNGDMRKALNIL 243
Query: 662 QSTHMASQHITEEAVYLCTGNPMPKDIEQISYWLLNESFATSFRSISDMKMRKGLALVDI 483
QSTHMASQ ITEEAVYLCTGNP+PKDIEQISYWLLNESFA SF+ IS+MKMRKGLALVDI
Sbjct: 244 QSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNESFADSFKRISEMKMRKGLALVDI 303
Query: 482 VREVTMFIFRIKMPSDARVHLINDLADIEYRLSFGCNDKLQLGSLLSAFTRARSAIVAAA 303
VREVTMF+F+IKMPSD RV L+NDLADIEYRLSFGCNDKLQLGS++S FT+ARSAIVAAA
Sbjct: 304 VREVTMFVFKIKMPSDVRVRLMNDLADIEYRLSFGCNDKLQLGSIISTFTQARSAIVAAA 363
Query: 302 K 300
K
Sbjct: 364 K 364
>ref|XP_003526636.1| PREDICTED: replication factor C subunit 3-like [Glycine max]
Length = 361
Score = 592 bits (1527), Expect = e-166
Identities = 300/360 (83%), Positives = 327/360 (90%), Gaps = 3/360 (0%)
Frame = -3
Query: 1373 MAESTAPMEIDSSVEPSMPNKGKSVIVAASE---AKATPWVEKYRPQSLADVAAHRDIVD 1203
MA++T PM+ID + P+KGKSV+ A + KA PWVEKYRPQSL DVAAHRDIVD
Sbjct: 1 MAQTTHPMDIDDHTYTASPDKGKSVVFAGNPPAAGKAIPWVEKYRPQSLDDVAAHRDIVD 60
Query: 1202 TIDRLTSENKLPHLLLYGPPGTGKTSTILAVARKLYGAQFHNMILELNASDDRGIDVVRQ 1023
TIDRLT+EN+LPHLLLYGPPGTGKTSTILAVARKLYG+Q+ NMILELNASDDRGIDVVRQ
Sbjct: 61 TIDRLTTENRLPHLLLYGPPGTGKTSTILAVARKLYGSQYQNMILELNASDDRGIDVVRQ 120
Query: 1022 QIQNFASTQSFSFGVKSPVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHVNK 843
QIQ+FASTQS SFGVKS VKLVLLDEADAMTKDAQFALRRVIEKYTK+TRFALICNHVNK
Sbjct: 121 QIQDFASTQSLSFGVKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNK 180
Query: 842 IIPALQSRCTRFRFAPLDATHVTERLKHVIDAEGLNVDDSGLTALVRLSNGDMRKALNIL 663
IIPALQSRCTRFRFAPLDA HVTERLKHVI AEGL+V+DSGL A VRLSNGDMRKALNIL
Sbjct: 181 IIPALQSRCTRFRFAPLDAVHVTERLKHVIKAEGLDVEDSGLAAFVRLSNGDMRKALNIL 240
Query: 662 QSTHMASQHITEEAVYLCTGNPMPKDIEQISYWLLNESFATSFRSISDMKMRKGLALVDI 483
QSTHMASQ ITEEAVYLCTGNP+PKDIE ISYWLLNE FA SF+ I +MK RKGLAL+DI
Sbjct: 241 QSTHMASQQITEEAVYLCTGNPLPKDIELISYWLLNEQFADSFKRIDEMKTRKGLALIDI 300
Query: 482 VREVTMFIFRIKMPSDARVHLINDLADIEYRLSFGCNDKLQLGSLLSAFTRARSAIVAAA 303
VREVTMF+F+IKMPS RV L+NDLADIEYRLSFGCNDKLQLGS++++FTRARSA+VAAA
Sbjct: 301 VREVTMFVFKIKMPSAVRVQLMNDLADIEYRLSFGCNDKLQLGSVIASFTRARSALVAAA 360
>ref|XP_002520343.1| replication factor C / DNA polymerase III gamma-tau subunit, putative
[Ricinus communis] gi|223540562|gb|EEF42129.1|
replication factor C / DNA polymerase III gamma-tau
subunit, putative [Ricinus communis]
Length = 360
Score = 587 bits (1514), Expect = e-165
Identities = 300/363 (82%), Positives = 329/363 (90%), Gaps = 5/363 (1%)
Frame = -3
Query: 1373 MAESTAPMEIDSSVEP-----SMPNKGKSVIVAASEAKATPWVEKYRPQSLADVAAHRDI 1209
MA+ M+ID V+ S PNKGK+V V + KATPWVEKYRPQSLADVAAHRDI
Sbjct: 1 MADVVTIMDIDEDVKEKQNQLSKPNKGKNVFV---DTKATPWVEKYRPQSLADVAAHRDI 57
Query: 1208 VDTIDRLTSENKLPHLLLYGPPGTGKTSTILAVARKLYGAQFHNMILELNASDDRGIDVV 1029
VDTIDRLT+EN+LPHLLLYGPPGTGKTSTILAVARKLYG Q+HNMILELNASDDRGIDVV
Sbjct: 58 VDTIDRLTNENRLPHLLLYGPPGTGKTSTILAVARKLYGVQYHNMILELNASDDRGIDVV 117
Query: 1028 RQQIQNFASTQSFSFGVKSPVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHV 849
RQQIQ+FASTQSFSF KS VKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHV
Sbjct: 118 RQQIQDFASTQSFSFDAKSAVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHV 177
Query: 848 NKIIPALQSRCTRFRFAPLDATHVTERLKHVIDAEGLNVDDSGLTALVRLSNGDMRKALN 669
NKIIPALQSRCTRFRFAPLD HVT+RLKHVI+AEGL+V + GL A+VRLSNGDMRKALN
Sbjct: 178 NKIIPALQSRCTRFRFAPLDPIHVTDRLKHVIEAEGLDVPEPGLAAVVRLSNGDMRKALN 237
Query: 668 ILQSTHMASQHITEEAVYLCTGNPMPKDIEQISYWLLNESFATSFRSISDMKMRKGLALV 489
ILQSTHMASQ ITEEAV+LCTGNP+PKDI+QISYWLLNESFA SF+ IS++K +KGLALV
Sbjct: 238 ILQSTHMASQQITEEAVHLCTGNPLPKDIQQISYWLLNESFAESFKRISEIKTKKGLALV 297
Query: 488 DIVREVTMFIFRIKMPSDARVHLINDLADIEYRLSFGCNDKLQLGSLLSAFTRARSAIVA 309
DIVREVTMF+F+IKMPSD RV LIND+ADIEYRLSFGC+DKLQLGSL+++FT ARSA+VA
Sbjct: 298 DIVREVTMFVFKIKMPSDVRVQLINDMADIEYRLSFGCSDKLQLGSLVASFTWARSALVA 357
Query: 308 AAK 300
AAK
Sbjct: 358 AAK 360
>gb|EXB60106.1| Replication factor C subunit 5 [Morus notabilis]
gi|587990838|gb|EXC75062.1| Replication factor C subunit
5 [Morus notabilis]
Length = 365
Score = 585 bits (1509), Expect = e-164
Identities = 301/351 (85%), Positives = 326/351 (92%), Gaps = 3/351 (0%)
Frame = -3
Query: 1343 DSSVEPSMPNKGKSVIVAASEAKATPWVEKYRPQSLADVAAHRDIVDTIDRLTSENKLPH 1164
D S +P NKGKS A S+ KATPWVEKYRPQSLADVAAHRDI+DTIDRLTSEN+LPH
Sbjct: 18 DRSAKPI--NKGKSG-AAPSDGKATPWVEKYRPQSLADVAAHRDIIDTIDRLTSENRLPH 74
Query: 1163 LLLYGPPGTGKTSTILAVARKLYGAQFHNMILELNASDDRGIDVVRQQIQNFASTQSFSF 984
LLLYGPPGTGKTSTILAVARKLYGAQ+HNMILELNASDDRGIDVVRQQIQ+FASTQSFSF
Sbjct: 75 LLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVVRQQIQDFASTQSFSF 134
Query: 983 GVKSPVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHVNKIIPALQSRCTRFR 804
GVK+ VKLVLLDEADAMTKDAQFALRRVIEKYTKNTRF+LICN+VNKIIPALQSRCTRFR
Sbjct: 135 GVKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFSLICNNVNKIIPALQSRCTRFR 194
Query: 803 FAPLDATHVTERLKHVIDAEG---LNVDDSGLTALVRLSNGDMRKALNILQSTHMASQHI 633
FAPLD HV ERLKHVI+AEG L+V +SGLTA VRLSNGDMRKALNILQSTHMAS+ I
Sbjct: 195 FAPLDPVHVNERLKHVIEAEGQVLLDVSESGLTAFVRLSNGDMRKALNILQSTHMASKKI 254
Query: 632 TEEAVYLCTGNPMPKDIEQISYWLLNESFATSFRSISDMKMRKGLALVDIVREVTMFIFR 453
TEE VYLCTGNP+PKDIEQISYWLLNESFA SF+ IS+MK RKGLALVDIVREVTMF+F+
Sbjct: 255 TEEEVYLCTGNPLPKDIEQISYWLLNESFAESFKQISNMKGRKGLALVDIVREVTMFVFK 314
Query: 452 IKMPSDARVHLINDLADIEYRLSFGCNDKLQLGSLLSAFTRARSAIVAAAK 300
IKMPSDARV LINDLADIEYRLSFGCNDKLQLGSL+++FT+AR+++VAAAK
Sbjct: 315 IKMPSDARVQLINDLADIEYRLSFGCNDKLQLGSLIASFTKARASLVAAAK 365
>ref|XP_003523440.1| PREDICTED: replication factor C subunit 3-like [Glycine max]
Length = 363
Score = 584 bits (1506), Expect = e-164
Identities = 300/362 (82%), Positives = 328/362 (90%), Gaps = 5/362 (1%)
Frame = -3
Query: 1373 MAESTAPMEIDSS--VEPSMPNKGKSVIVAASEA---KATPWVEKYRPQSLADVAAHRDI 1209
MAE+ M+IDS + P+K KSV+VA++ A KA PWVEKYRP SL DVAAHRDI
Sbjct: 1 MAETNHHMDIDSDDHTYTARPDKAKSVVVASNPAAAGKAIPWVEKYRPLSLDDVAAHRDI 60
Query: 1208 VDTIDRLTSENKLPHLLLYGPPGTGKTSTILAVARKLYGAQFHNMILELNASDDRGIDVV 1029
VDTIDRLT+EN+LPHLLLYGPPGTGKTSTILAVARKLYG+Q+ NMILELNASDDRGIDVV
Sbjct: 61 VDTIDRLTTENRLPHLLLYGPPGTGKTSTILAVARKLYGSQYQNMILELNASDDRGIDVV 120
Query: 1028 RQQIQNFASTQSFSFGVKSPVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHV 849
RQQIQ+FASTQS SFGVKS VKLVLLDEADAMTKDAQFALRRVIEKYTK+TRFALICNHV
Sbjct: 121 RQQIQDFASTQSLSFGVKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHV 180
Query: 848 NKIIPALQSRCTRFRFAPLDATHVTERLKHVIDAEGLNVDDSGLTALVRLSNGDMRKALN 669
NKIIPALQSRCTRFRFAPLDA HVTERLKHVI AEGL+V+DSGL ALVRLSNGDMRKALN
Sbjct: 181 NKIIPALQSRCTRFRFAPLDAVHVTERLKHVIKAEGLDVEDSGLAALVRLSNGDMRKALN 240
Query: 668 ILQSTHMASQHITEEAVYLCTGNPMPKDIEQISYWLLNESFATSFRSISDMKMRKGLALV 489
ILQSTHMASQ ITEE VYLCTGNP+PKDIEQISYWLLNE FA SF+ I +MK RKGLALV
Sbjct: 241 ILQSTHMASQQITEETVYLCTGNPLPKDIEQISYWLLNEQFADSFKRIDEMKTRKGLALV 300
Query: 488 DIVREVTMFIFRIKMPSDARVHLINDLADIEYRLSFGCNDKLQLGSLLSAFTRARSAIVA 309
DIVREVT+F+F+IKMPS RV L+NDLADIEYRLSFGCNDKLQLGS++++F+RARSA+VA
Sbjct: 301 DIVREVTLFVFKIKMPSAVRVQLMNDLADIEYRLSFGCNDKLQLGSVIASFSRARSALVA 360
Query: 308 AA 303
AA
Sbjct: 361 AA 362
>ref|XP_002302226.1| replication factor C 36 kDA family protein [Populus trichocarpa]
gi|222843952|gb|EEE81499.1| replication factor C 36 kDA
family protein [Populus trichocarpa]
Length = 363
Score = 584 bits (1505), Expect = e-164
Identities = 299/362 (82%), Positives = 328/362 (90%), Gaps = 5/362 (1%)
Frame = -3
Query: 1373 MAESTAPMEIDSSVEP---SMPNKGKSVIVAASE--AKATPWVEKYRPQSLADVAAHRDI 1209
MAE+ A M+ID S PNKGK V+V A+ KATPWVEKYRPQSLADVAAHRDI
Sbjct: 1 MAEAIALMDIDEEENQNHLSKPNKGKKVVVPATPPGGKATPWVEKYRPQSLADVAAHRDI 60
Query: 1208 VDTIDRLTSENKLPHLLLYGPPGTGKTSTILAVARKLYGAQFHNMILELNASDDRGIDVV 1029
+DTIDRLTSEN+LPHLLLYGPPGTGKTSTILAVARKLYGAQ+HNMILELNASDDRGIDVV
Sbjct: 61 IDTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVV 120
Query: 1028 RQQIQNFASTQSFSFGVKSPVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHV 849
R+QIQ+FASTQSFSFG K+ VKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHV
Sbjct: 121 RKQIQDFASTQSFSFGAKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHV 180
Query: 848 NKIIPALQSRCTRFRFAPLDATHVTERLKHVIDAEGLNVDDSGLTALVRLSNGDMRKALN 669
NKIIPALQSRCTRFRFAPLD HV ERLKHVI+AEGL+V +SGL AL LSNGDMRKALN
Sbjct: 181 NKIIPALQSRCTRFRFAPLDPMHVGERLKHVIEAEGLDVPESGLEALKCLSNGDMRKALN 240
Query: 668 ILQSTHMASQHITEEAVYLCTGNPMPKDIEQISYWLLNESFATSFRSISDMKMRKGLALV 489
ILQSTHMASQ ITEE VYLCTGNP+P+D++QI++WLLNESFA S++ IS++K RKGLALV
Sbjct: 241 ILQSTHMASQQITEETVYLCTGNPLPQDVQQITHWLLNESFAESYKRISEIKTRKGLALV 300
Query: 488 DIVREVTMFIFRIKMPSDARVHLINDLADIEYRLSFGCNDKLQLGSLLSAFTRARSAIVA 309
DIVREVTMF+F+IKM SD RV LINDLADIEYRLSFGCNDKLQLGSL+++FTRARSA+VA
Sbjct: 301 DIVREVTMFVFKIKMQSDIRVPLINDLADIEYRLSFGCNDKLQLGSLIASFTRARSALVA 360
Query: 308 AA 303
AA
Sbjct: 361 AA 362
>ref|XP_004502480.1| PREDICTED: replication factor C subunit 5-like isoform X1 [Cicer
arietinum]
Length = 363
Score = 581 bits (1497), Expect = e-163
Identities = 296/359 (82%), Positives = 327/359 (91%), Gaps = 4/359 (1%)
Frame = -3
Query: 1367 ESTAPMEIDSSVE-PSMPNKGKSVIVAASEA---KATPWVEKYRPQSLADVAAHRDIVDT 1200
E T PM+ID + S P+KGK+VI A + + K+T WVEKYRPQSL DVAAHRDIVDT
Sbjct: 4 EGTYPMDIDQTNSFSSNPDKGKTVISAPNPSIGGKSTLWVEKYRPQSLDDVAAHRDIVDT 63
Query: 1199 IDRLTSENKLPHLLLYGPPGTGKTSTILAVARKLYGAQFHNMILELNASDDRGIDVVRQQ 1020
IDRLT+EN+LPHLLLYGPPGTGKTSTILAVARKLYGAQ+HNMILELNASDDRGIDVVRQQ
Sbjct: 64 IDRLTTENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVVRQQ 123
Query: 1019 IQNFASTQSFSFGVKSPVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHVNKI 840
IQ+FASTQS SFGVK VKL+LLDEADAMTKDAQFALRRVIEKYTK+TRFALICNHVNKI
Sbjct: 124 IQDFASTQSLSFGVKPSVKLILLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNKI 183
Query: 839 IPALQSRCTRFRFAPLDATHVTERLKHVIDAEGLNVDDSGLTALVRLSNGDMRKALNILQ 660
I ALQSRCTRFRFAPLDA HVTERLKHVI AEGL+V DSGL+ALVRLSNGDMRKALNILQ
Sbjct: 184 IQALQSRCTRFRFAPLDAVHVTERLKHVIKAEGLDVQDSGLSALVRLSNGDMRKALNILQ 243
Query: 659 STHMASQHITEEAVYLCTGNPMPKDIEQISYWLLNESFATSFRSISDMKMRKGLALVDIV 480
STHMASQ ITEEAVYLCTGNP+PKDIEQISYWLLNE ++ S++ I D+K RKGLAL+DIV
Sbjct: 244 STHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNEQYSDSYKRIHDIKTRKGLALIDIV 303
Query: 479 REVTMFIFRIKMPSDARVHLINDLADIEYRLSFGCNDKLQLGSLLSAFTRARSAIVAAA 303
REVTMF+F+IKMP+ RV L+NDLADIEYRLSFGCNDKLQLGS++++FTRARSA+VAAA
Sbjct: 304 REVTMFVFKIKMPAAVRVQLVNDLADIEYRLSFGCNDKLQLGSVIASFTRARSALVAAA 362
>ref|XP_003602039.1| Replication factor C subunit [Medicago truncatula]
gi|355491087|gb|AES72290.1| Replication factor C subunit
[Medicago truncatula]
Length = 355
Score = 580 bits (1494), Expect = e-163
Identities = 298/360 (82%), Positives = 326/360 (90%), Gaps = 3/360 (0%)
Frame = -3
Query: 1373 MAESTAPMEIDSSVEPSMPNKGKSVIVAASEA---KATPWVEKYRPQSLADVAAHRDIVD 1203
MAE T M+ID + +KGK+VI A + + KA+ WVEKYRPQSL DVAAHRDIVD
Sbjct: 1 MAEETYAMDID------VTDKGKTVIAAGNPSFGGKASLWVEKYRPQSLDDVAAHRDIVD 54
Query: 1202 TIDRLTSENKLPHLLLYGPPGTGKTSTILAVARKLYGAQFHNMILELNASDDRGIDVVRQ 1023
TIDRLT+EN+LPHLLLYGPPGTGKTSTILAVARKLYGAQ+HNMILELNASDDRGIDVVRQ
Sbjct: 55 TIDRLTTENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVVRQ 114
Query: 1022 QIQNFASTQSFSFGVKSPVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHVNK 843
QIQ+FASTQS SFGVK VKLVLLDEADAMTKDAQFALRRVIEKYTK+TRFALICNHVNK
Sbjct: 115 QIQDFASTQSLSFGVKPSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNK 174
Query: 842 IIPALQSRCTRFRFAPLDATHVTERLKHVIDAEGLNVDDSGLTALVRLSNGDMRKALNIL 663
IIPALQSRCTRFRFAPLDA HVTERLKHVI+AE L+V DSGL+ALVRLSNGDMRKALNIL
Sbjct: 175 IIPALQSRCTRFRFAPLDAVHVTERLKHVINAERLDVQDSGLSALVRLSNGDMRKALNIL 234
Query: 662 QSTHMASQHITEEAVYLCTGNPMPKDIEQISYWLLNESFATSFRSISDMKMRKGLALVDI 483
QSTHMASQ ITEEAVYLCTGNP+PKDIEQISYWLLNE ++ SF+ I DMK RKGLAL+DI
Sbjct: 235 QSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNEQYSESFKRIYDMKTRKGLALIDI 294
Query: 482 VREVTMFIFRIKMPSDARVHLINDLADIEYRLSFGCNDKLQLGSLLSAFTRARSAIVAAA 303
VREVTMF+F+I MPS RV L+NDLADIEYRLSFGCNDKLQLGS++++FTRARSA+VAAA
Sbjct: 295 VREVTMFVFKINMPSAVRVQLVNDLADIEYRLSFGCNDKLQLGSVVASFTRARSAMVAAA 354
>ref|XP_004502481.1| PREDICTED: replication factor C subunit 5-like isoform X2 [Cicer
arietinum]
Length = 364
Score = 576 bits (1485), Expect = e-162
Identities = 296/360 (82%), Positives = 327/360 (90%), Gaps = 5/360 (1%)
Frame = -3
Query: 1367 ESTAPMEIDSSVE-PSMPNKGKSVIVAASEA---KATPWVEKYRPQSLADVAAHRDIVDT 1200
E T PM+ID + S P+KGK+VI A + + K+T WVEKYRPQSL DVAAHRDIVDT
Sbjct: 4 EGTYPMDIDQTNSFSSNPDKGKTVISAPNPSIGGKSTLWVEKYRPQSLDDVAAHRDIVDT 63
Query: 1199 IDRLTSENKLPHLLLYGPPGTGKTSTILAVARKLYGAQFHNMILELNASDDRGIDVVRQQ 1020
IDRLT+EN+LPHLLLYGPPGTGKTSTILAVARKLYGAQ+HNMILELNASDDRGIDVVRQQ
Sbjct: 64 IDRLTTENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVVRQQ 123
Query: 1019 IQNFASTQSFSFG-VKSPVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHVNK 843
IQ+FASTQS SFG VK VKL+LLDEADAMTKDAQFALRRVIEKYTK+TRFALICNHVNK
Sbjct: 124 IQDFASTQSLSFGFVKPSVKLILLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNK 183
Query: 842 IIPALQSRCTRFRFAPLDATHVTERLKHVIDAEGLNVDDSGLTALVRLSNGDMRKALNIL 663
II ALQSRCTRFRFAPLDA HVTERLKHVI AEGL+V DSGL+ALVRLSNGDMRKALNIL
Sbjct: 184 IIQALQSRCTRFRFAPLDAVHVTERLKHVIKAEGLDVQDSGLSALVRLSNGDMRKALNIL 243
Query: 662 QSTHMASQHITEEAVYLCTGNPMPKDIEQISYWLLNESFATSFRSISDMKMRKGLALVDI 483
QSTHMASQ ITEEAVYLCTGNP+PKDIEQISYWLLNE ++ S++ I D+K RKGLAL+DI
Sbjct: 244 QSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNEQYSDSYKRIHDIKTRKGLALIDI 303
Query: 482 VREVTMFIFRIKMPSDARVHLINDLADIEYRLSFGCNDKLQLGSLLSAFTRARSAIVAAA 303
VREVTMF+F+IKMP+ RV L+NDLADIEYRLSFGCNDKLQLGS++++FTRARSA+VAAA
Sbjct: 304 VREVTMFVFKIKMPAAVRVQLVNDLADIEYRLSFGCNDKLQLGSVIASFTRARSALVAAA 363
>ref|NP_001048280.1| Os02g0775200 [Oryza sativa Japonica Group]
gi|75132556|sp|Q6YZ54.1|RFC3_ORYSJ RecName:
Full=Replication factor C subunit 3; Short=OsRFC3;
AltName: Full=Activator 1 subunit 3
gi|46805779|dbj|BAD17147.1| putative replication factor C
36kDa subunit [Oryza sativa Japonica Group]
gi|46806135|dbj|BAD17365.1| putative replication factor C
36kDa subunit [Oryza sativa Japonica Group]
gi|113537811|dbj|BAF10194.1| Os02g0775200 [Oryza sativa
Japonica Group] gi|215697717|dbj|BAG91711.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|218191668|gb|EEC74095.1| hypothetical protein
OsI_09136 [Oryza sativa Indica Group]
Length = 361
Score = 575 bits (1483), Expect = e-161
Identities = 287/357 (80%), Positives = 322/357 (90%), Gaps = 1/357 (0%)
Frame = -3
Query: 1370 AESTAPMEIDSSVEP-SMPNKGKSVIVAASEAKATPWVEKYRPQSLADVAAHRDIVDTID 1194
A + PM+ID++ P KGK+ + + +A PWVEKYRPQSL DVAAHRDIVDTID
Sbjct: 4 ATAATPMDIDAAAPPPGAAAKGKAPLSSTPGGRAAPWVEKYRPQSLGDVAAHRDIVDTID 63
Query: 1193 RLTSENKLPHLLLYGPPGTGKTSTILAVARKLYGAQFHNMILELNASDDRGIDVVRQQIQ 1014
RLT+EN+LPHLLLYGPPGTGKTSTILAVARKLYG+Q+ NMILELNASD+RGIDVVRQQIQ
Sbjct: 64 RLTNENRLPHLLLYGPPGTGKTSTILAVARKLYGSQYGNMILELNASDERGIDVVRQQIQ 123
Query: 1013 NFASTQSFSFGVKSPVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHVNKIIP 834
+FAS +S SFG K VK+VLLDEADAMTKDAQFALRRVIEK+T++TRFALICNHVNKIIP
Sbjct: 124 DFASARSLSFGAKQSVKMVLLDEADAMTKDAQFALRRVIEKHTRSTRFALICNHVNKIIP 183
Query: 833 ALQSRCTRFRFAPLDATHVTERLKHVIDAEGLNVDDSGLTALVRLSNGDMRKALNILQST 654
ALQSRCTRFRFAPLD THV ERLKH+I +EGL+VDD GLTALVRLSNGDMRKALNILQST
Sbjct: 184 ALQSRCTRFRFAPLDGTHVRERLKHIIQSEGLDVDDGGLTALVRLSNGDMRKALNILQST 243
Query: 653 HMASQHITEEAVYLCTGNPMPKDIEQISYWLLNESFATSFRSISDMKMRKGLALVDIVRE 474
HMAS+ ITEEAVYLCTGNPMPKDIEQI+YWLLNESF+TSF+ ISDMKMRKGLALVDI+RE
Sbjct: 244 HMASKQITEEAVYLCTGNPMPKDIEQIAYWLLNESFSTSFKCISDMKMRKGLALVDIIRE 303
Query: 473 VTMFIFRIKMPSDARVHLINDLADIEYRLSFGCNDKLQLGSLLSAFTRARSAIVAAA 303
VTMF+F+I+MPSD R+ LINDLADIEYRLSF CNDKLQLG+L+S FT AR+A+VAAA
Sbjct: 304 VTMFVFKIQMPSDVRIKLINDLADIEYRLSFACNDKLQLGALISTFTGARTAMVAAA 360
>ref|XP_003570529.1| PREDICTED: replication factor C subunit 5-like [Brachypodium
distachyon]
Length = 358
Score = 571 bits (1472), Expect = e-160
Identities = 284/356 (79%), Positives = 325/356 (91%)
Frame = -3
Query: 1370 AESTAPMEIDSSVEPSMPNKGKSVIVAASEAKATPWVEKYRPQSLADVAAHRDIVDTIDR 1191
A +TAPM+ID++ P +KGK+ + AA+ +++PWVEKYRPQSLADVAAHRDIVDTIDR
Sbjct: 4 AATTAPMDIDAAAPPH--SKGKAPLSAAAAVRSSPWVEKYRPQSLADVAAHRDIVDTIDR 61
Query: 1190 LTSENKLPHLLLYGPPGTGKTSTILAVARKLYGAQFHNMILELNASDDRGIDVVRQQIQN 1011
LT EN+LPHLLLYGPPGTGKTSTILAVARK+YG+Q+ NMILELNASD+RGI VVRQQIQ+
Sbjct: 62 LTDENRLPHLLLYGPPGTGKTSTILAVARKIYGSQYGNMILELNASDERGIGVVRQQIQD 121
Query: 1010 FASTQSFSFGVKSPVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHVNKIIPA 831
FAS S SFG K VKLVLLDEADAMTKDAQFALRRVIEKYT++TRFALICNHVNKIIPA
Sbjct: 122 FASAHSLSFGAKPAVKLVLLDEADAMTKDAQFALRRVIEKYTRSTRFALICNHVNKIIPA 181
Query: 830 LQSRCTRFRFAPLDATHVTERLKHVIDAEGLNVDDSGLTALVRLSNGDMRKALNILQSTH 651
LQSRCTRFRFAPLD +HV+ERL+H+I +EGL+VD+ GLTALVRLS+GDMRKALNILQSTH
Sbjct: 182 LQSRCTRFRFAPLDGSHVSERLQHIIKSEGLDVDEGGLTALVRLSSGDMRKALNILQSTH 241
Query: 650 MASQHITEEAVYLCTGNPMPKDIEQISYWLLNESFATSFRSISDMKMRKGLALVDIVREV 471
MASQ ITEEAVYLCTGNPMPKDIEQI++WLLNE F+TSF+ ISDMKMRKGLAL+DI+REV
Sbjct: 242 MASQQITEEAVYLCTGNPMPKDIEQIAFWLLNEPFSTSFKYISDMKMRKGLALIDIIREV 301
Query: 470 TMFIFRIKMPSDARVHLINDLADIEYRLSFGCNDKLQLGSLLSAFTRARSAIVAAA 303
TMF+F+IKMP + RV LINDLADIEYRL+F CNDKLQLG+L+S FT AR+A+VAAA
Sbjct: 302 TMFVFKIKMPCNVRVKLINDLADIEYRLTFACNDKLQLGALISTFTSARTAMVAAA 357
>dbj|BAB16439.1| replication factor C 36kDa subunit [Oryza sativa Japonica Group]
Length = 367
Score = 571 bits (1471), Expect = e-160
Identities = 288/363 (79%), Positives = 323/363 (88%), Gaps = 7/363 (1%)
Frame = -3
Query: 1370 AESTAPMEIDSSVEP-SMPNKGKSVIVAASEAKATPWVEKYRPQSLADVAAHRDIVDTID 1194
A + PM+ID++ P KGK+ + + +A PWVEKYRPQSL DVAAHRDIVDTID
Sbjct: 4 ATAATPMDIDAAAPPPGAAAKGKAPLSSTPGGRAAPWVEKYRPQSLGDVAAHRDIVDTID 63
Query: 1193 RLTSENKLPHLLLYGPPGTGKTSTILAVARKLYGAQFHNMILELNASDDRGIDVVRQQIQ 1014
RLT+EN+LPHLLLYGPPGTGKTSTILAVARKLYG+Q+ NMILELNASD+RGIDVVRQQIQ
Sbjct: 64 RLTNENRLPHLLLYGPPGTGKTSTILAVARKLYGSQYGNMILELNASDERGIDVVRQQIQ 123
Query: 1013 NFASTQSFSFGVKSPVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHVNKIIP 834
+FAS +S SFG K VK+VLLDEADAMTKDAQFALRRVIEK+T++TRFALICNHVNKIIP
Sbjct: 124 DFASARSLSFGAKQSVKMVLLDEADAMTKDAQFALRRVIEKHTRSTRFALICNHVNKIIP 183
Query: 833 ALQSRCTRFRFAPLDATHVTERLKHVIDAEGLNVDDSGLTALVRLSNGDMRKALNILQST 654
ALQSRCTRFRFAPLD THV ERLKH+I +EGL+VDD GLTALVRLSNGDMRKALNILQST
Sbjct: 184 ALQSRCTRFRFAPLDGTHVRERLKHIIQSEGLDVDDGGLTALVRLSNGDMRKALNILQST 243
Query: 653 HMASQHITEEAVYLCTGNPMPKDIEQISYWLLNESFATSFR------SISDMKMRKGLAL 492
HMAS+ ITEEAVYLCTGNPMPKDIEQI+YWLLNESF+TSF+ SISDMKMRKGLAL
Sbjct: 244 HMASKQITEEAVYLCTGNPMPKDIEQIAYWLLNESFSTSFKCILNYQSISDMKMRKGLAL 303
Query: 491 VDIVREVTMFIFRIKMPSDARVHLINDLADIEYRLSFGCNDKLQLGSLLSAFTRARSAIV 312
VDI+REVTMF+F+I+MPSD R+ LINDLADIEYRLSF CNDKLQLG+L+S FT AR+A+V
Sbjct: 304 VDIIREVTMFVFKIQMPSDVRIKLINDLADIEYRLSFACNDKLQLGALISTFTGARTAMV 363
Query: 311 AAA 303
AAA
Sbjct: 364 AAA 366
>ref|XP_007137424.1| hypothetical protein PHAVU_009G126000g [Phaseolus vulgaris]
gi|561010511|gb|ESW09418.1| hypothetical protein
PHAVU_009G126000g [Phaseolus vulgaris]
Length = 359
Score = 569 bits (1466), Expect = e-159
Identities = 289/357 (80%), Positives = 318/357 (89%), Gaps = 3/357 (0%)
Frame = -3
Query: 1364 STAPMEIDSSVEPSMPNKGKSVIVAASEA---KATPWVEKYRPQSLADVAAHRDIVDTID 1194
+T PMEIDS + + G+ VI + KA PWVEKYRPQSL DVAAHRDIVDTID
Sbjct: 2 TTHPMEIDSDGDDHTHSAGECVIGSEDLPAFDKAIPWVEKYRPQSLDDVAAHRDIVDTID 61
Query: 1193 RLTSENKLPHLLLYGPPGTGKTSTILAVARKLYGAQFHNMILELNASDDRGIDVVRQQIQ 1014
+LT+EN+LPHLLLYGPPGTGKTSTILAVARKLYG++F NMILELNASDDRGIDVVRQQIQ
Sbjct: 62 KLTTENRLPHLLLYGPPGTGKTSTILAVARKLYGSRFRNMILELNASDDRGIDVVRQQIQ 121
Query: 1013 NFASTQSFSFGVKSPVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHVNKIIP 834
+FASTQS SFGVK VKLVLLDEADAMTKDAQFALRRVIEKYTK+TRFALICNHVNKIIP
Sbjct: 122 DFASTQSLSFGVKYSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNKIIP 181
Query: 833 ALQSRCTRFRFAPLDATHVTERLKHVIDAEGLNVDDSGLTALVRLSNGDMRKALNILQST 654
ALQSRCTRFRFAPLDA HVTER+KHVI AEGL+V D GL ALVRLSNGDMRKALNILQST
Sbjct: 182 ALQSRCTRFRFAPLDAVHVTERMKHVIKAEGLDVQDDGLVALVRLSNGDMRKALNILQST 241
Query: 653 HMASQHITEEAVYLCTGNPMPKDIEQISYWLLNESFATSFRSISDMKMRKGLALVDIVRE 474
HMA+Q ITEEA+YLCTGNP+PKDIEQISYWLLNE + SF+ I +MK RKGLALVDI+RE
Sbjct: 242 HMATQQITEEAIYLCTGNPLPKDIEQISYWLLNEQYTDSFKRIEEMKTRKGLALVDIIRE 301
Query: 473 VTMFIFRIKMPSDARVHLINDLADIEYRLSFGCNDKLQLGSLLSAFTRARSAIVAAA 303
V MF+F+IKMPS RV L+NDLADIEYRLSFGCNDKLQLGS++++FTRARSA+VAAA
Sbjct: 302 VIMFVFKIKMPSAVRVQLMNDLADIEYRLSFGCNDKLQLGSVIASFTRARSALVAAA 358
>ref|XP_004242038.1| PREDICTED: replication factor C subunit 5-like [Solanum lycopersicum]
Length = 357
Score = 569 bits (1466), Expect = e-159
Identities = 285/358 (79%), Positives = 326/358 (91%)
Frame = -3
Query: 1373 MAESTAPMEIDSSVEPSMPNKGKSVIVAASEAKATPWVEKYRPQSLADVAAHRDIVDTID 1194
MAE+ + M+ID + P+KGK+ IV+ +E K+ PWVEK+RPQSL+DVAAHRDIV+TID
Sbjct: 1 MAETISSMDIDDDKIDTKPSKGKN-IVSNTEPKSVPWVEKFRPQSLSDVAAHRDIVETID 59
Query: 1193 RLTSENKLPHLLLYGPPGTGKTSTILAVARKLYGAQFHNMILELNASDDRGIDVVRQQIQ 1014
RL S N+LPHLLLYGPPGTGKTSTILA+ARKLYG+Q NM+LELNASDDRGIDVVRQQIQ
Sbjct: 60 RLASSNRLPHLLLYGPPGTGKTSTILALARKLYGSQMQNMVLELNASDDRGIDVVRQQIQ 119
Query: 1013 NFASTQSFSFGVKSPVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHVNKIIP 834
+FASTQS SFG KS VKLVLLDEADAMTKDAQFALRRVIE+YT+NTRFALICN+VNK+IP
Sbjct: 120 DFASTQSISFGAKSAVKLVLLDEADAMTKDAQFALRRVIERYTRNTRFALICNNVNKVIP 179
Query: 833 ALQSRCTRFRFAPLDATHVTERLKHVIDAEGLNVDDSGLTALVRLSNGDMRKALNILQST 654
ALQSRCTRFRFAPLDA HV+ERLKHV++AE L+V + GL ALVRLSNGDMRKALNILQST
Sbjct: 180 ALQSRCTRFRFAPLDAVHVSERLKHVVEAEQLDVPEGGLKALVRLSNGDMRKALNILQST 239
Query: 653 HMASQHITEEAVYLCTGNPMPKDIEQISYWLLNESFATSFRSISDMKMRKGLALVDIVRE 474
HMASQ I+E+AVYLCTGNP+PKDIEQISYWLLNE FA S + IS++K RKGLALVDIVRE
Sbjct: 240 HMASQQISEDAVYLCTGNPLPKDIEQISYWLLNEPFAISCKRISEIKTRKGLALVDIVRE 299
Query: 473 VTMFIFRIKMPSDARVHLINDLADIEYRLSFGCNDKLQLGSLLSAFTRARSAIVAAAK 300
VTMF+F+IKMP++ RV LIN++ADIEYRL+FGCNDKLQLGSL+SAFTRARSA+VAAAK
Sbjct: 300 VTMFVFKIKMPANVRVQLINEMADIEYRLTFGCNDKLQLGSLISAFTRARSALVAAAK 357
>dbj|BAK01840.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326531584|dbj|BAJ97796.1| predicted protein [Hordeum
vulgare subsp. vulgare]
Length = 359
Score = 569 bits (1466), Expect = e-159
Identities = 283/356 (79%), Positives = 322/356 (90%)
Frame = -3
Query: 1370 AESTAPMEIDSSVEPSMPNKGKSVIVAASEAKATPWVEKYRPQSLADVAAHRDIVDTIDR 1191
A + APM+ID + P KGK+ + AA+ K++PWVEKYRPQSLADVAAHRDIVDTIDR
Sbjct: 4 ATAAAPMDIDGAAAPPA-FKGKAPLSAAAAVKSSPWVEKYRPQSLADVAAHRDIVDTIDR 62
Query: 1190 LTSENKLPHLLLYGPPGTGKTSTILAVARKLYGAQFHNMILELNASDDRGIDVVRQQIQN 1011
LT EN+LPHLLLYGPPGTGKTSTILAVARK+YG+Q+ NMILELNASD+RGI VVRQQIQ+
Sbjct: 63 LTDENRLPHLLLYGPPGTGKTSTILAVARKIYGSQYGNMILELNASDERGIGVVRQQIQD 122
Query: 1010 FASTQSFSFGVKSPVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHVNKIIPA 831
FAS S SFG K VKLVLLDEADAMTKDAQFALRRVIEKYT++TRFALICNHVNKIIPA
Sbjct: 123 FASAHSLSFGAKPAVKLVLLDEADAMTKDAQFALRRVIEKYTRSTRFALICNHVNKIIPA 182
Query: 830 LQSRCTRFRFAPLDATHVTERLKHVIDAEGLNVDDSGLTALVRLSNGDMRKALNILQSTH 651
LQSRCTRFRFAPLD +HV+ERL+H+I +EGL+VD+ GL+ALVRLSNGDMRK+LNILQSTH
Sbjct: 183 LQSRCTRFRFAPLDGSHVSERLRHIIKSEGLDVDEGGLSALVRLSNGDMRKSLNILQSTH 242
Query: 650 MASQHITEEAVYLCTGNPMPKDIEQISYWLLNESFATSFRSISDMKMRKGLALVDIVREV 471
MASQ ITEEAVYLCTGNPMPKDIEQI++WLLNE F+TSF+ I+DMKMRKGLAL+DI+REV
Sbjct: 243 MASQQITEEAVYLCTGNPMPKDIEQIAFWLLNEPFSTSFKHIADMKMRKGLALIDIIREV 302
Query: 470 TMFIFRIKMPSDARVHLINDLADIEYRLSFGCNDKLQLGSLLSAFTRARSAIVAAA 303
TMF+F+IKMPS RV LINDLADIEYRL+F CNDKLQLG+L+S FT AR+A+VAAA
Sbjct: 303 TMFVFKIKMPSSVRVKLINDLADIEYRLTFACNDKLQLGALISTFTTARTAMVAAA 358
>ref|XP_006365532.1| PREDICTED: replication factor C subunit 3-like [Solanum tuberosum]
Length = 357
Score = 568 bits (1465), Expect = e-159
Identities = 284/358 (79%), Positives = 324/358 (90%)
Frame = -3
Query: 1373 MAESTAPMEIDSSVEPSMPNKGKSVIVAASEAKATPWVEKYRPQSLADVAAHRDIVDTID 1194
MAE+ + M+ID + PN GK+ IV+ +E ++ PWVEK+RPQSL+DVAAHRDIV+TID
Sbjct: 1 MAETISLMDIDDDKIDTKPNNGKN-IVSNTEPRSVPWVEKFRPQSLSDVAAHRDIVETID 59
Query: 1193 RLTSENKLPHLLLYGPPGTGKTSTILAVARKLYGAQFHNMILELNASDDRGIDVVRQQIQ 1014
RL S N+LPHLLLYGPPGTGKTSTILA+ARKLYG+Q HNM+LELNASDDRGIDVVRQQIQ
Sbjct: 60 RLASSNRLPHLLLYGPPGTGKTSTILALARKLYGSQMHNMVLELNASDDRGIDVVRQQIQ 119
Query: 1013 NFASTQSFSFGVKSPVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHVNKIIP 834
+FASTQS SFG KS VKLVLLDEADAMTKDAQFALRRVIEKYT+NTRFAL+CN+VNK+IP
Sbjct: 120 DFASTQSISFGAKSAVKLVLLDEADAMTKDAQFALRRVIEKYTRNTRFALVCNNVNKVIP 179
Query: 833 ALQSRCTRFRFAPLDATHVTERLKHVIDAEGLNVDDSGLTALVRLSNGDMRKALNILQST 654
ALQSRCTRFRFAPLDA HV+ERLKHV++AE L+V + GL ALVRLSNGDMRKALNILQST
Sbjct: 180 ALQSRCTRFRFAPLDAVHVSERLKHVVEAEQLDVPEGGLKALVRLSNGDMRKALNILQST 239
Query: 653 HMASQHITEEAVYLCTGNPMPKDIEQISYWLLNESFATSFRSISDMKMRKGLALVDIVRE 474
HMASQ I+E+AVYLCTGNP+PKDIEQISYWLLNE F S + IS++K RKGLALVDIVRE
Sbjct: 240 HMASQQISEDAVYLCTGNPLPKDIEQISYWLLNEPFTISCKRISEIKTRKGLALVDIVRE 299
Query: 473 VTMFIFRIKMPSDARVHLINDLADIEYRLSFGCNDKLQLGSLLSAFTRARSAIVAAAK 300
VTMF+F+IKMP+ RV LIN++ADIEYRL+FGCNDKLQLGSL+SAFTRARSA+VAAAK
Sbjct: 300 VTMFVFKIKMPATVRVQLINEMADIEYRLTFGCNDKLQLGSLISAFTRARSALVAAAK 357
>gb|ACG35868.1| replication factor C subunit 3 [Zea mays]
Length = 362
Score = 568 bits (1464), Expect = e-159
Identities = 286/358 (79%), Positives = 322/358 (89%), Gaps = 4/358 (1%)
Frame = -3
Query: 1364 STAPMEIDSSVEPSMPN----KGKSVIVAASEAKATPWVEKYRPQSLADVAAHRDIVDTI 1197
+ APM+ID++ P P KGK+++ A +A PWVEKYRPQSLADVAAHRDIVDTI
Sbjct: 6 AAAPMDIDAAAPPPPPPGAAAKGKALLSAGG--RAAPWVEKYRPQSLADVAAHRDIVDTI 63
Query: 1196 DRLTSENKLPHLLLYGPPGTGKTSTILAVARKLYGAQFHNMILELNASDDRGIDVVRQQI 1017
DRLT+EN+LPHLLLYGPPGTGKTSTILAVARKLYG+Q+ NMILELNASD+RGIDVVRQQI
Sbjct: 64 DRLTNENRLPHLLLYGPPGTGKTSTILAVARKLYGSQYSNMILELNASDERGIDVVRQQI 123
Query: 1016 QNFASTQSFSFGVKSPVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHVNKII 837
Q+FA +S SFG + VKLVLLDEADAMTKDAQFALRRVIEKYT++TRFALICNHVNKII
Sbjct: 124 QDFAGARSLSFGARPSVKLVLLDEADAMTKDAQFALRRVIEKYTRSTRFALICNHVNKII 183
Query: 836 PALQSRCTRFRFAPLDATHVTERLKHVIDAEGLNVDDSGLTALVRLSNGDMRKALNILQS 657
PALQSRCTRFRFAPLD +HV ERL+H+I +EGL+VDD GLTALVRLSNGDMRKALNILQS
Sbjct: 184 PALQSRCTRFRFAPLDGSHVRERLQHIIKSEGLSVDDGGLTALVRLSNGDMRKALNILQS 243
Query: 656 THMASQHITEEAVYLCTGNPMPKDIEQISYWLLNESFATSFRSISDMKMRKGLALVDIVR 477
THMASQ ITEEAVYLCTGNPMPKDIEQI++WLLNE F+TSF+ ISDMKMRKGLALVDI+R
Sbjct: 244 THMASQQITEEAVYLCTGNPMPKDIEQIAFWLLNEPFSTSFKYISDMKMRKGLALVDIIR 303
Query: 476 EVTMFIFRIKMPSDARVHLINDLADIEYRLSFGCNDKLQLGSLLSAFTRARSAIVAAA 303
EVTMF+F+I+MPSD RV LIN+LADIEYRLSF CNDKLQLG+L+S FT R+A+VAAA
Sbjct: 304 EVTMFVFKIQMPSDVRVKLINNLADIEYRLSFACNDKLQLGALISTFTDTRTAMVAAA 361
>ref|XP_006856708.1| hypothetical protein AMTR_s00054p00174840 [Amborella trichopoda]
gi|548860608|gb|ERN18175.1| hypothetical protein
AMTR_s00054p00174840 [Amborella trichopoda]
Length = 359
Score = 567 bits (1462), Expect = e-159
Identities = 289/358 (80%), Positives = 316/358 (88%), Gaps = 4/358 (1%)
Frame = -3
Query: 1361 TAPMEIDSSVEPSM----PNKGKSVIVAASEAKATPWVEKYRPQSLADVAAHRDIVDTID 1194
++PM++D E M KGK V KATPWVEKYRPQSLADVAAH+DI+DT+D
Sbjct: 2 SSPMDVDVEREQDMRYLQTGKGKVVEREQLLPKATPWVEKYRPQSLADVAAHKDIIDTVD 61
Query: 1193 RLTSENKLPHLLLYGPPGTGKTSTILAVARKLYGAQFHNMILELNASDDRGIDVVRQQIQ 1014
RLT+EN+LPHLLLYGPPGTGKTST+LAVARKLYG NMILELNASDDRGIDVVRQQIQ
Sbjct: 62 RLTNENRLPHLLLYGPPGTGKTSTVLAVARKLYGGNLRNMILELNASDDRGIDVVRQQIQ 121
Query: 1013 NFASTQSFSFGVKSPVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHVNKIIP 834
+FASTQSFSFG KS VKLVLLDEADAMTKDAQFALRRVIEKYTK+TRFALICNHVNKIIP
Sbjct: 122 DFASTQSFSFGAKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNKIIP 181
Query: 833 ALQSRCTRFRFAPLDATHVTERLKHVIDAEGLNVDDSGLTALVRLSNGDMRKALNILQST 654
ALQSRCTRFRFAPLDA HV ERL++VI AEGL+VD+SGL+A+VRLSNGDMRKALNILQST
Sbjct: 182 ALQSRCTRFRFAPLDAAHVRERLQYVIKAEGLDVDESGLSAVVRLSNGDMRKALNILQST 241
Query: 653 HMASQHITEEAVYLCTGNPMPKDIEQISYWLLNESFATSFRSISDMKMRKGLALVDIVRE 474
HMASQH++E+AVYLCTGNPMPKD+EQIS WLLNE FATS++ ISDMK KGLALVDIVRE
Sbjct: 242 HMASQHVSEKAVYLCTGNPMPKDVEQISNWLLNEDFATSYKYISDMKTTKGLALVDIVRE 301
Query: 473 VTMFIFRIKMPSDARVHLINDLADIEYRLSFGCNDKLQLGSLLSAFTRARSAIVAAAK 300
VTMFIF IKMPS RV LINDLADIEYRLSFGCNDKLQLGSL+ +FT R A+ AAAK
Sbjct: 302 VTMFIFMIKMPSTVRVQLINDLADIEYRLSFGCNDKLQLGSLIGSFTHVRCAMEAAAK 359