BLASTX nr result
ID: Sinomenium21_contig00032981
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00032981
(424 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002301008.1| pentatricopeptide repeat-containing family p... 83 3e-14
ref|XP_006472722.1| PREDICTED: pentatricopeptide repeat-containi... 82 8e-14
ref|XP_006434131.1| hypothetical protein CICLE_v10000478mg [Citr... 82 8e-14
ref|NP_192561.1| pentatricopeptide repeat-containing protein [Ar... 80 2e-13
ref|XP_002874524.1| pentatricopeptide repeat-containing protein ... 80 4e-13
emb|CBI19066.3| unnamed protein product [Vitis vinifera] 79 8e-13
ref|XP_002284396.1| PREDICTED: pentatricopeptide repeat-containi... 79 8e-13
gb|EXB44339.1| hypothetical protein L484_020151 [Morus notabilis] 78 1e-12
emb|CAN65641.1| hypothetical protein VITISV_018600 [Vitis vinifera] 78 1e-12
ref|XP_004292678.1| PREDICTED: pentatricopeptide repeat-containi... 77 3e-12
ref|XP_006287191.1| hypothetical protein CARUB_v10000366mg [Caps... 75 7e-12
ref|XP_007224379.1| hypothetical protein PRUPE_ppa021566mg [Prun... 72 8e-11
ref|XP_003527928.1| PREDICTED: pentatricopeptide repeat-containi... 70 3e-10
ref|XP_006397331.1| hypothetical protein EUTSA_v10028488mg [Eutr... 69 7e-10
ref|XP_004172772.1| PREDICTED: pentatricopeptide repeat-containi... 67 2e-09
ref|XP_004140384.1| PREDICTED: pentatricopeptide repeat-containi... 67 2e-09
ref|XP_007137372.1| hypothetical protein PHAVU_009G121800g [Phas... 66 4e-09
ref|XP_006847060.1| hypothetical protein AMTR_s00017p00201310 [A... 65 1e-08
ref|XP_003601089.1| Pentatricopeptide repeat-containing protein ... 62 8e-08
ref|XP_004165491.1| PREDICTED: LOW QUALITY PROTEIN: putative pen... 62 1e-07
>ref|XP_002301008.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222842734|gb|EEE80281.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 691
Score = 83.2 bits (204), Expect = 3e-14
Identities = 39/65 (60%), Positives = 49/65 (75%)
Frame = -2
Query: 201 MNLERIVAASRHCGQIRAFKPGKSIHALLIKLGYSEEVFVANNLLSMYGDFSLTGDAQTL 22
M+L+ IVAA RHCG+++A K GKS H+ LIK GYS V++A NL+SMY DF+ DA L
Sbjct: 1 MDLKHIVAAIRHCGRVKALKQGKSFHSHLIKTGYSHNVYIACNLVSMYADFTFLIDAYKL 60
Query: 21 FDEMP 7
FDEMP
Sbjct: 61 FDEMP 65
>ref|XP_006472722.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g08210-like [Citrus sinensis]
Length = 692
Score = 82.0 bits (201), Expect = 8e-14
Identities = 38/67 (56%), Positives = 47/67 (70%)
Frame = -2
Query: 201 MNLERIVAASRHCGQIRAFKPGKSIHALLIKLGYSEEVFVANNLLSMYGDFSLTGDAQTL 22
M+L RIV A RHCGQ R+ K GKS+H +IK G S+++F NNLLSMY DF+ DA L
Sbjct: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
Query: 21 FDEMPER 1
FDEM +
Sbjct: 61 FDEMARK 67
>ref|XP_006434131.1| hypothetical protein CICLE_v10000478mg [Citrus clementina]
gi|557536253|gb|ESR47371.1| hypothetical protein
CICLE_v10000478mg [Citrus clementina]
Length = 692
Score = 82.0 bits (201), Expect = 8e-14
Identities = 38/67 (56%), Positives = 47/67 (70%)
Frame = -2
Query: 201 MNLERIVAASRHCGQIRAFKPGKSIHALLIKLGYSEEVFVANNLLSMYGDFSLTGDAQTL 22
M+L RIV A RHCGQ R+ K GKS+H +IK G S+++F NNLLSMY DF+ DA L
Sbjct: 1 MDLRRIVEALRHCGQRRSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKL 60
Query: 21 FDEMPER 1
FDEM +
Sbjct: 61 FDEMARK 67
>ref|NP_192561.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208454|sp|Q9SUF9.1|PP305_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At4g08210 gi|5262194|emb|CAB45791.1| putative protein
[Arabidopsis thaliana] gi|7267461|emb|CAB81157.1|
putative protein [Arabidopsis thaliana]
gi|332657209|gb|AEE82609.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 686
Score = 80.5 bits (197), Expect = 2e-13
Identities = 38/69 (55%), Positives = 51/69 (73%)
Frame = -2
Query: 207 LFMNLERIVAASRHCGQIRAFKPGKSIHALLIKLGYSEEVFVANNLLSMYGDFSLTGDAQ 28
+ M+L+ I A RHCG+++AFK G+SI A +IK G S+ VF+ANN++SMY DF L DA
Sbjct: 1 MVMDLKLIAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAH 60
Query: 27 TLFDEMPER 1
+FDEM ER
Sbjct: 61 KVFDEMSER 69
>ref|XP_002874524.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297320361|gb|EFH50783.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 688
Score = 79.7 bits (195), Expect = 4e-13
Identities = 38/67 (56%), Positives = 50/67 (74%)
Frame = -2
Query: 201 MNLERIVAASRHCGQIRAFKPGKSIHALLIKLGYSEEVFVANNLLSMYGDFSLTGDAQTL 22
M+L+ I A RHCG+I+AFK G+SI A ++K G S+ VF+ANN++SMY DF L DA +
Sbjct: 3 MDLKLIAAGLRHCGKIQAFKRGESIQAHIVKQGISQNVFLANNVISMYVDFRLLSDAHKV 62
Query: 21 FDEMPER 1
FDEM ER
Sbjct: 63 FDEMTER 69
>emb|CBI19066.3| unnamed protein product [Vitis vinifera]
Length = 521
Score = 78.6 bits (192), Expect = 8e-13
Identities = 39/67 (58%), Positives = 49/67 (73%)
Frame = -2
Query: 201 MNLERIVAASRHCGQIRAFKPGKSIHALLIKLGYSEEVFVANNLLSMYGDFSLTGDAQTL 22
M+L RIV+ R CG+ RAF+ G+S+HA +IKLG +VF ANNLL+MY D SL DA+ L
Sbjct: 1 MDLHRIVSVIRQCGRFRAFRHGRSLHAHIIKLGVFNDVFFANNLLAMYVDISLLKDARRL 60
Query: 21 FDEMPER 1
FDE ER
Sbjct: 61 FDETLER 67
>ref|XP_002284396.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g08210-like [Vitis vinifera]
Length = 690
Score = 78.6 bits (192), Expect = 8e-13
Identities = 39/67 (58%), Positives = 49/67 (73%)
Frame = -2
Query: 201 MNLERIVAASRHCGQIRAFKPGKSIHALLIKLGYSEEVFVANNLLSMYGDFSLTGDAQTL 22
M+L RIV+ R CG+ RAF+ G+S+HA +IKLG +VF ANNLL+MY D SL DA+ L
Sbjct: 1 MDLHRIVSVIRQCGRFRAFRHGRSLHAHIIKLGVFNDVFFANNLLAMYVDISLLKDARRL 60
Query: 21 FDEMPER 1
FDE ER
Sbjct: 61 FDETLER 67
>gb|EXB44339.1| hypothetical protein L484_020151 [Morus notabilis]
Length = 1270
Score = 78.2 bits (191), Expect = 1e-12
Identities = 38/67 (56%), Positives = 46/67 (68%)
Frame = -2
Query: 201 MNLERIVAASRHCGQIRAFKPGKSIHALLIKLGYSEEVFVANNLLSMYGDFSLTGDAQTL 22
M+L I RHCG+IRAF PGK+ H LIKLG S +VF ANNL+SMY F DA+ +
Sbjct: 581 MDLNHIAKGLRHCGRIRAFNPGKAFHCHLIKLGVSSDVFFANNLISMYAGFWDLKDARKM 640
Query: 21 FDEMPER 1
FDEM +R
Sbjct: 641 FDEMLDR 647
>emb|CAN65641.1| hypothetical protein VITISV_018600 [Vitis vinifera]
Length = 869
Score = 78.2 bits (191), Expect = 1e-12
Identities = 39/67 (58%), Positives = 49/67 (73%)
Frame = -2
Query: 201 MNLERIVAASRHCGQIRAFKPGKSIHALLIKLGYSEEVFVANNLLSMYGDFSLTGDAQTL 22
M+L RIV+ R CG+ RAF+ G+S+HA +IKLG +VF ANNLL+MY D SL DA+ L
Sbjct: 1 MDLHRIVSVIRQCGRXRAFRHGRSLHAHIIKLGVFNDVFFANNLLAMYVDISLLKDARRL 60
Query: 21 FDEMPER 1
FDE ER
Sbjct: 61 FDETLER 67
>ref|XP_004292678.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g08210-like [Fragaria vesca subsp. vesca]
Length = 686
Score = 76.6 bits (187), Expect = 3e-12
Identities = 38/68 (55%), Positives = 49/68 (72%), Gaps = 1/68 (1%)
Frame = -2
Query: 201 MNLERIVAASRHCGQIRAFKPGKSIHALLIKLGYSEEVFVANNLLSMYGDF-SLTGDAQT 25
M L RI A RHCG+I+AF GK+ H+ LIKLG +VF++NNL+S+Y + L DAQ
Sbjct: 1 MYLNRIAIALRHCGRIQAFNHGKAFHSQLIKLGIMADVFLSNNLISLYAETPRLINDAQK 60
Query: 24 LFDEMPER 1
LFDEMP+R
Sbjct: 61 LFDEMPQR 68
>ref|XP_006287191.1| hypothetical protein CARUB_v10000366mg [Capsella rubella]
gi|482555897|gb|EOA20089.1| hypothetical protein
CARUB_v10000366mg [Capsella rubella]
Length = 689
Score = 75.5 bits (184), Expect = 7e-12
Identities = 35/69 (50%), Positives = 50/69 (72%)
Frame = -2
Query: 207 LFMNLERIVAASRHCGQIRAFKPGKSIHALLIKLGYSEEVFVANNLLSMYGDFSLTGDAQ 28
+ M+ + I A RHCG+++AF+ G+SI A ++K G S+ VF+ANN++SMY DF GDA
Sbjct: 1 MVMDFKLIAAGLRHCGKLQAFQRGESIQAHIMKQGISQNVFLANNVISMYIDFRYLGDAH 60
Query: 27 TLFDEMPER 1
+FDEM ER
Sbjct: 61 KVFDEMTER 69
>ref|XP_007224379.1| hypothetical protein PRUPE_ppa021566mg [Prunus persica]
gi|462421315|gb|EMJ25578.1| hypothetical protein
PRUPE_ppa021566mg [Prunus persica]
Length = 691
Score = 72.0 bits (175), Expect = 8e-11
Identities = 35/65 (53%), Positives = 44/65 (67%)
Frame = -2
Query: 195 LERIVAASRHCGQIRAFKPGKSIHALLIKLGYSEEVFVANNLLSMYGDFSLTGDAQTLFD 16
L RI A R CG++RA GKS H LIKLG +VF+ANNL+SMY F DA+ +FD
Sbjct: 6 LNRIALALRQCGRVRASNHGKSFHCQLIKLGVWNDVFLANNLISMYVGFPCLEDARKVFD 65
Query: 15 EMPER 1
EMP++
Sbjct: 66 EMPDK 70
>ref|XP_003527928.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g08210-like [Glycine max]
Length = 686
Score = 70.1 bits (170), Expect = 3e-10
Identities = 33/67 (49%), Positives = 47/67 (70%)
Frame = -2
Query: 201 MNLERIVAASRHCGQIRAFKPGKSIHALLIKLGYSEEVFVANNLLSMYGDFSLTGDAQTL 22
M+L +I A R CG+ +A K KS+H+L+IKLG S +F+ N+++S+Y S DA+TL
Sbjct: 1 MDLNQIQLALRCCGRFQAIKHAKSLHSLIIKLGLSNHIFLLNSIISVYAKCSRFDDARTL 60
Query: 21 FDEMPER 1
FDEMP R
Sbjct: 61 FDEMPHR 67
>ref|XP_006397331.1| hypothetical protein EUTSA_v10028488mg [Eutrema salsugineum]
gi|557098348|gb|ESQ38784.1| hypothetical protein
EUTSA_v10028488mg [Eutrema salsugineum]
Length = 686
Score = 68.9 bits (167), Expect = 7e-10
Identities = 33/67 (49%), Positives = 46/67 (68%)
Frame = -2
Query: 201 MNLERIVAASRHCGQIRAFKPGKSIHALLIKLGYSEEVFVANNLLSMYGDFSLTGDAQTL 22
M+ + + A RHCG+++AF G+SI A LIK G + VF+ANN++SM DF GDA +
Sbjct: 1 MDFKLLAAGLRHCGKLQAFNRGESIQAHLIKQGIYQNVFLANNVISMQIDFRSLGDAHKV 60
Query: 21 FDEMPER 1
FDEM +R
Sbjct: 61 FDEMTDR 67
>ref|XP_004172772.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g08210-like [Cucumis sativus]
Length = 680
Score = 67.4 bits (163), Expect = 2e-09
Identities = 31/57 (54%), Positives = 40/57 (70%)
Frame = -2
Query: 171 RHCGQIRAFKPGKSIHALLIKLGYSEEVFVANNLLSMYGDFSLTGDAQTLFDEMPER 1
RHC +RAFK G +IHA L K G +VF+ANNL+SMY +F DA+ +FDEM +R
Sbjct: 11 RHCATVRAFKRGNAIHAYLRKFGGLNDVFLANNLISMYAEFFNVRDAEKVFDEMTDR 67
>ref|XP_004140384.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g08210-like [Cucumis sativus]
Length = 688
Score = 67.4 bits (163), Expect = 2e-09
Identities = 31/57 (54%), Positives = 40/57 (70%)
Frame = -2
Query: 171 RHCGQIRAFKPGKSIHALLIKLGYSEEVFVANNLLSMYGDFSLTGDAQTLFDEMPER 1
RHC +RAFK G +IHA L K G +VF+ANNL+SMY +F DA+ +FDEM +R
Sbjct: 11 RHCATVRAFKRGNAIHAYLRKFGGLNDVFLANNLISMYAEFFNVRDAEKVFDEMTDR 67
>ref|XP_007137372.1| hypothetical protein PHAVU_009G121800g [Phaseolus vulgaris]
gi|561010459|gb|ESW09366.1| hypothetical protein
PHAVU_009G121800g [Phaseolus vulgaris]
Length = 686
Score = 66.2 bits (160), Expect = 4e-09
Identities = 32/67 (47%), Positives = 45/67 (67%)
Frame = -2
Query: 201 MNLERIVAASRHCGQIRAFKPGKSIHALLIKLGYSEEVFVANNLLSMYGDFSLTGDAQTL 22
M+L +I A R CG+ +A K KS+H+ +IKLG VF+ NN++S+Y S DA+TL
Sbjct: 1 MDLNQIQLALRCCGRFQAIKHAKSLHSHIIKLGLFSHVFLLNNIISVYAKCSQFDDARTL 60
Query: 21 FDEMPER 1
FD+MP R
Sbjct: 61 FDDMPHR 67
>ref|XP_006847060.1| hypothetical protein AMTR_s00017p00201310 [Amborella trichopoda]
gi|548850089|gb|ERN08641.1| hypothetical protein
AMTR_s00017p00201310 [Amborella trichopoda]
Length = 591
Score = 65.1 bits (157), Expect = 1e-08
Identities = 32/67 (47%), Positives = 42/67 (62%)
Frame = -2
Query: 201 MNLERIVAASRHCGQIRAFKPGKSIHALLIKLGYSEEVFVANNLLSMYGDFSLTGDAQTL 22
MNLE I A+ R G+ F GK++H +IK G+ + F+ NNL+SMY DF + A L
Sbjct: 1 MNLETIAASLRGYGRSGDFGLGKALHCHIIKCGFGSKTFICNNLISMYMDFCFSESAHKL 60
Query: 21 FDEMPER 1
FDEMP R
Sbjct: 61 FDEMPVR 67
>ref|XP_003601089.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355490137|gb|AES71340.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 745
Score = 62.0 bits (149), Expect = 8e-08
Identities = 28/67 (41%), Positives = 43/67 (64%)
Frame = -2
Query: 201 MNLERIVAASRHCGQIRAFKPGKSIHALLIKLGYSEEVFVANNLLSMYGDFSLTGDAQTL 22
M+L I A R+C + R+ K KS+H+ +IK G+ +F+ NN++S+Y S DA+ +
Sbjct: 1 MDLNHIQIAFRYCIRFRSIKNAKSLHSHIIKSGFCNHIFILNNMISVYSKCSSIIDARNM 60
Query: 21 FDEMPER 1
FDEMP R
Sbjct: 61 FDEMPHR 67
>ref|XP_004165491.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At5g52630-like [Cucumis
sativus]
Length = 598
Score = 61.6 bits (148), Expect = 1e-07
Identities = 29/60 (48%), Positives = 40/60 (66%)
Frame = -2
Query: 180 AASRHCGQIRAFKPGKSIHALLIKLGYSEEVFVANNLLSMYGDFSLTGDAQTLFDEMPER 1
+A++ CG +R GKS+H L +K GY +VFV ++L+ MY GDA+ LFDEMPER
Sbjct: 131 SATKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPER 190