BLASTX nr result
ID: Sinomenium21_contig00032764
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00032764
(498 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004306550.1| PREDICTED: pentatricopeptide repeat-containi... 94 1e-17
ref|XP_004138818.1| PREDICTED: pentatricopeptide repeat-containi... 94 3e-17
ref|XP_002532083.1| pentatricopeptide repeat-containing protein,... 93 3e-17
ref|XP_006422261.1| hypothetical protein CICLE_v10004323mg [Citr... 91 1e-16
ref|XP_002316152.1| pentatricopeptide repeat-containing family p... 90 3e-16
ref|XP_006359236.1| PREDICTED: pentatricopeptide repeat-containi... 88 1e-15
ref|XP_004245808.1| PREDICTED: pentatricopeptide repeat-containi... 87 2e-15
ref|XP_007011289.1| Pentatricopeptide repeat (PPR) superfamily p... 85 9e-15
ref|XP_004504664.1| PREDICTED: pentatricopeptide repeat-containi... 85 1e-14
ref|XP_002887788.1| EMB2217 [Arabidopsis lyrata subsp. lyrata] g... 84 2e-14
ref|XP_006389884.1| hypothetical protein EUTSA_v10018121mg [Eutr... 83 3e-14
ref|XP_006300415.1| hypothetical protein CARUB_v10021690mg [Caps... 83 4e-14
ref|XP_003555011.2| PREDICTED: pentatricopeptide repeat-containi... 82 6e-14
ref|XP_007213281.1| hypothetical protein PRUPE_ppa027212mg, part... 82 6e-14
emb|CBI22115.3| unnamed protein product [Vitis vinifera] 82 1e-13
ref|XP_002279656.1| PREDICTED: pentatricopeptide repeat-containi... 82 1e-13
ref|NP_178067.1| pentatricopeptide repeat-containing protein [Ar... 80 3e-13
ref|XP_007151569.1| hypothetical protein PHAVU_004G057900g [Phas... 80 4e-13
gb|EXB51258.1| hypothetical protein L484_019251 [Morus notabilis] 79 5e-13
gb|EYU27583.1| hypothetical protein MIMGU_mgv1a027117mg, partial... 69 9e-10
>ref|XP_004306550.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79490,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 844
Score = 94.4 bits (233), Expect = 1e-17
Identities = 44/63 (69%), Positives = 52/63 (82%)
Frame = +2
Query: 308 GCNFFRTFSSGDNGGRAEEWTEDIVYLDETGDVIFSGKGIRSVEPGLDDHVMVGGLKKPF 487
GC+F R + SG N ++EWTE+I YLDE+G VI++GKGIRSVEPGLDDHVMVGGLKKP
Sbjct: 89 GCDFVRNYCSGKN---SDEWTEEIEYLDESGSVIYTGKGIRSVEPGLDDHVMVGGLKKPL 145
Query: 488 SNA 496
NA
Sbjct: 146 LNA 148
>ref|XP_004138818.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79490,
mitochondrial-like [Cucumis sativus]
gi|449490234|ref|XP_004158545.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g79490,
mitochondrial-like [Cucumis sativus]
Length = 823
Score = 93.6 bits (231), Expect = 3e-17
Identities = 47/64 (73%), Positives = 53/64 (82%), Gaps = 3/64 (4%)
Frame = +2
Query: 314 NFFRTFSSGD---NGGRAEEWTEDIVYLDETGDVIFSGKGIRSVEPGLDDHVMVGGLKKP 484
+F R++ SG NGGR EWTEDI YLDE+G VIFSGKG+RSVEPG+DDHVMVGGLKKP
Sbjct: 66 SFTRSYCSGKESGNGGR--EWTEDIEYLDESGSVIFSGKGVRSVEPGVDDHVMVGGLKKP 123
Query: 485 FSNA 496
F NA
Sbjct: 124 FLNA 127
>ref|XP_002532083.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223528243|gb|EEF30297.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 841
Score = 93.2 bits (230), Expect = 3e-17
Identities = 46/73 (63%), Positives = 54/73 (73%), Gaps = 1/73 (1%)
Frame = +2
Query: 278 YPFGLEFYEKGCNFFRTFSSGD-NGGRAEEWTEDIVYLDETGDVIFSGKGIRSVEPGLDD 454
Y + + K F R + SG+ N G + +WTEDI YLDE+G VI+SGKGIRSVEPGLDD
Sbjct: 77 YATDIPYCSKDSYFARNYCSGNINEGGSAKWTEDIEYLDESGSVIYSGKGIRSVEPGLDD 136
Query: 455 HVMVGGLKKPFSN 493
HVMVGGLKKPF N
Sbjct: 137 HVMVGGLKKPFLN 149
>ref|XP_006422261.1| hypothetical protein CICLE_v10004323mg [Citrus clementina]
gi|568881878|ref|XP_006493776.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g79490,
mitochondrial-like [Citrus sinensis]
gi|557524134|gb|ESR35501.1| hypothetical protein
CICLE_v10004323mg [Citrus clementina]
Length = 827
Score = 91.3 bits (225), Expect = 1e-16
Identities = 55/131 (41%), Positives = 73/131 (55%), Gaps = 2/131 (1%)
Frame = +2
Query: 110 CSRNLKRASNKLNNFYLLERNPNSETFTYXXXXXXXXXXXXXGRRKIGFFSGEKKIYPFG 289
C RNL + K NF R P F + ++ + GE + +
Sbjct: 9 CPRNLYLSLTKNPNF----RYPFHSNFIHHLDFNHKFIKNTSFSSRLDY--GETQNFVKD 62
Query: 290 LEFYEKGCNFFRTFSSGDNGG--RAEEWTEDIVYLDETGDVIFSGKGIRSVEPGLDDHVM 463
F+ K N+ R++ SG +G + EWTE+I YLDE+G VI++GKGIRSVEPG DDHVM
Sbjct: 63 AIFFRKP-NYVRSYCSGKSGDGEKCNEWTEEIEYLDESGSVIYTGKGIRSVEPGFDDHVM 121
Query: 464 VGGLKKPFSNA 496
VGG+KKPF NA
Sbjct: 122 VGGIKKPFLNA 132
>ref|XP_002316152.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222865192|gb|EEF02323.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 785
Score = 90.1 bits (222), Expect = 3e-16
Identities = 43/65 (66%), Positives = 50/65 (76%), Gaps = 1/65 (1%)
Frame = +2
Query: 305 KGCNFFRTFSSGDNGGRAE-EWTEDIVYLDETGDVIFSGKGIRSVEPGLDDHVMVGGLKK 481
K +F R + +G NG EWTEDI YLDE+G VI+SGKGIRSVEPG+DDHVM+GGLKK
Sbjct: 26 KANSFVRNYCAGKNGEAGSGEWTEDIEYLDESGSVIYSGKGIRSVEPGVDDHVMIGGLKK 85
Query: 482 PFSNA 496
P NA
Sbjct: 86 PILNA 90
>ref|XP_006359236.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79490,
mitochondrial-like [Solanum tuberosum]
Length = 794
Score = 87.8 bits (216), Expect = 1e-15
Identities = 42/58 (72%), Positives = 48/58 (82%)
Frame = +2
Query: 323 RTFSSGDNGGRAEEWTEDIVYLDETGDVIFSGKGIRSVEPGLDDHVMVGGLKKPFSNA 496
R + SG N ++EWTED+ YLDE+G VI+SGKGIRSVEPGLDDHVMVGGLKKP NA
Sbjct: 43 RYYCSGKN---SDEWTEDVEYLDESGSVIYSGKGIRSVEPGLDDHVMVGGLKKPILNA 97
>ref|XP_004245808.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79490,
mitochondrial-like [Solanum lycopersicum]
Length = 794
Score = 87.0 bits (214), Expect = 2e-15
Identities = 39/51 (76%), Positives = 45/51 (88%)
Frame = +2
Query: 344 NGGRAEEWTEDIVYLDETGDVIFSGKGIRSVEPGLDDHVMVGGLKKPFSNA 496
+G ++EWTED+ YLDE+G VI+SGKGIRSVEPGLDDHVMVGGLKKP NA
Sbjct: 47 SGKSSDEWTEDVEYLDESGSVIYSGKGIRSVEPGLDDHVMVGGLKKPILNA 97
>ref|XP_007011289.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
cacao] gi|508728202|gb|EOY20099.1| Pentatricopeptide
repeat (PPR) superfamily protein [Theobroma cacao]
Length = 820
Score = 85.1 bits (209), Expect = 9e-15
Identities = 39/47 (82%), Positives = 42/47 (89%)
Frame = +2
Query: 356 AEEWTEDIVYLDETGDVIFSGKGIRSVEPGLDDHVMVGGLKKPFSNA 496
+ EWTEDI YLDE+G VI+SGKGIRSVEPGLDDHVMVGGLKKP NA
Sbjct: 78 SREWTEDIEYLDESGTVIYSGKGIRSVEPGLDDHVMVGGLKKPIMNA 124
>ref|XP_004504664.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79490,
mitochondrial-like [Cicer arietinum]
Length = 824
Score = 84.7 bits (208), Expect = 1e-14
Identities = 39/67 (58%), Positives = 51/67 (76%)
Frame = +2
Query: 296 FYEKGCNFFRTFSSGDNGGRAEEWTEDIVYLDETGDVIFSGKGIRSVEPGLDDHVMVGGL 475
F +K +F R + + N G ++EWTE+I YLDE+G VI+ GKG+RSV PG+DDHVMVG +
Sbjct: 64 FIDKNVSFIRCYCN--NSGGSKEWTEEIEYLDESGSVIYKGKGVRSVMPGVDDHVMVGEV 121
Query: 476 KKPFSNA 496
KKPF NA
Sbjct: 122 KKPFLNA 128
>ref|XP_002887788.1| EMB2217 [Arabidopsis lyrata subsp. lyrata]
gi|297333629|gb|EFH64047.1| EMB2217 [Arabidopsis lyrata
subsp. lyrata]
Length = 832
Score = 84.0 bits (206), Expect = 2e-14
Identities = 40/59 (67%), Positives = 47/59 (79%), Gaps = 1/59 (1%)
Frame = +2
Query: 323 RTFSSGDNGG-RAEEWTEDIVYLDETGDVIFSGKGIRSVEPGLDDHVMVGGLKKPFSNA 496
R F S +GG + WTE++ YLDE+G V+ SGKGIRSVEPGLDDHVMVGGLKKP+ NA
Sbjct: 78 RRFCSEKSGGSESSGWTEEVEYLDESGSVLHSGKGIRSVEPGLDDHVMVGGLKKPYMNA 136
>ref|XP_006389884.1| hypothetical protein EUTSA_v10018121mg [Eutrema salsugineum]
gi|557086318|gb|ESQ27170.1| hypothetical protein
EUTSA_v10018121mg [Eutrema salsugineum]
Length = 836
Score = 83.2 bits (204), Expect = 3e-14
Identities = 43/73 (58%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Frame = +2
Query: 281 PFGLEFYEKGCNFFRTFSSGDN-GGRAEEWTEDIVYLDETGDVIFSGKGIRSVEPGLDDH 457
P GL + R F S + + WTE++ YLDE+G VI SGKGIRSVEPGLDDH
Sbjct: 68 PVGLIKQSPSPSVVRRFCSDKSRSSESSGWTEEVEYLDESGSVIHSGKGIRSVEPGLDDH 127
Query: 458 VMVGGLKKPFSNA 496
VMVGGLKKPF NA
Sbjct: 128 VMVGGLKKPFMNA 140
>ref|XP_006300415.1| hypothetical protein CARUB_v10021690mg [Capsella rubella]
gi|482569125|gb|EOA33313.1| hypothetical protein
CARUB_v10021690mg [Capsella rubella]
Length = 836
Score = 82.8 bits (203), Expect = 4e-14
Identities = 41/60 (68%), Positives = 48/60 (80%), Gaps = 2/60 (3%)
Frame = +2
Query: 323 RTFSSGDNGGRAEE--WTEDIVYLDETGDVIFSGKGIRSVEPGLDDHVMVGGLKKPFSNA 496
R F S + GG +E WTE++ YLDE+G V+ SGKGIRSVEPGLDDHVMVGGLKKP+ NA
Sbjct: 82 RRFCS-EKGGSSESSGWTEEVEYLDESGSVLHSGKGIRSVEPGLDDHVMVGGLKKPYMNA 140
>ref|XP_003555011.2| PREDICTED: pentatricopeptide repeat-containing protein At1g79490,
mitochondrial-like [Glycine max]
Length = 818
Score = 82.4 bits (202), Expect = 6e-14
Identities = 38/52 (73%), Positives = 46/52 (88%)
Frame = +2
Query: 341 DNGGRAEEWTEDIVYLDETGDVIFSGKGIRSVEPGLDDHVMVGGLKKPFSNA 496
D+GG A+EWTE+I YLDE+G VI+ GKG+RSVEPG+DDHVMVG +KKPF NA
Sbjct: 73 DSGG-AKEWTEEIEYLDESGGVIYKGKGVRSVEPGVDDHVMVGEVKKPFVNA 123
>ref|XP_007213281.1| hypothetical protein PRUPE_ppa027212mg, partial [Prunus persica]
gi|462409146|gb|EMJ14480.1| hypothetical protein
PRUPE_ppa027212mg, partial [Prunus persica]
Length = 747
Score = 82.4 bits (202), Expect = 6e-14
Identities = 37/46 (80%), Positives = 42/46 (91%)
Frame = +2
Query: 359 EEWTEDIVYLDETGDVIFSGKGIRSVEPGLDDHVMVGGLKKPFSNA 496
+EWTE+I YLDE+G VI++GKGIRSVEPGLDDHVMVG LKKPF NA
Sbjct: 7 DEWTEEIEYLDESGSVIYTGKGIRSVEPGLDDHVMVGDLKKPFLNA 52
>emb|CBI22115.3| unnamed protein product [Vitis vinifera]
Length = 765
Score = 81.6 bits (200), Expect = 1e-13
Identities = 42/67 (62%), Positives = 50/67 (74%), Gaps = 7/67 (10%)
Frame = +2
Query: 314 NFFRTFSSGD---NGGRA---EEWT-EDIVYLDETGDVIFSGKGIRSVEPGLDDHVMVGG 472
NF R F SG+ N R+ +W ED+ YLDE+G VIF+GKG+RSV+PGLDDHVMVGG
Sbjct: 35 NFSRAFCSGNHHQNSNRSTSSSDWNQEDVEYLDESGSVIFTGKGVRSVDPGLDDHVMVGG 94
Query: 473 LKKPFSN 493
LKKPF N
Sbjct: 95 LKKPFLN 101
>ref|XP_002279656.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79490,
mitochondrial-like [Vitis vinifera]
Length = 844
Score = 81.6 bits (200), Expect = 1e-13
Identities = 42/67 (62%), Positives = 50/67 (74%), Gaps = 7/67 (10%)
Frame = +2
Query: 314 NFFRTFSSGD---NGGRA---EEWT-EDIVYLDETGDVIFSGKGIRSVEPGLDDHVMVGG 472
NF R F SG+ N R+ +W ED+ YLDE+G VIF+GKG+RSV+PGLDDHVMVGG
Sbjct: 77 NFSRAFCSGNHHQNSNRSTSSSDWNQEDVEYLDESGSVIFTGKGVRSVDPGLDDHVMVGG 136
Query: 473 LKKPFSN 493
LKKPF N
Sbjct: 137 LKKPFLN 143
>ref|NP_178067.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75200795|sp|Q9SAK0.1|PP132_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g79490, mitochondrial; AltName: Full=Protein EMBRYO
DEFECTIVE 2217; Flags: Precursor
gi|4835759|gb|AAD30226.1|AC007202_8 T8K14.9 [Arabidopsis
thaliana] gi|332198129|gb|AEE36250.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 836
Score = 80.1 bits (196), Expect = 3e-13
Identities = 35/44 (79%), Positives = 40/44 (90%)
Frame = +2
Query: 365 WTEDIVYLDETGDVIFSGKGIRSVEPGLDDHVMVGGLKKPFSNA 496
WTE++ YLDE+G V+ SGKGIRSVEPGLDDHVMVGGLKKP+ NA
Sbjct: 97 WTEEVEYLDESGSVLHSGKGIRSVEPGLDDHVMVGGLKKPYMNA 140
>ref|XP_007151569.1| hypothetical protein PHAVU_004G057900g [Phaseolus vulgaris]
gi|561024878|gb|ESW23563.1| hypothetical protein
PHAVU_004G057900g [Phaseolus vulgaris]
Length = 755
Score = 79.7 bits (195), Expect = 4e-13
Identities = 37/52 (71%), Positives = 44/52 (84%)
Frame = +2
Query: 341 DNGGRAEEWTEDIVYLDETGDVIFSGKGIRSVEPGLDDHVMVGGLKKPFSNA 496
D+GG + WTE+I YLDE+G VI+ GKG+RSVEPGLDDHVMVG +KKPF NA
Sbjct: 10 DSGGSGK-WTEEIEYLDESGGVIYKGKGVRSVEPGLDDHVMVGEVKKPFVNA 60
>gb|EXB51258.1| hypothetical protein L484_019251 [Morus notabilis]
Length = 834
Score = 79.3 bits (194), Expect = 5e-13
Identities = 39/64 (60%), Positives = 47/64 (73%), Gaps = 4/64 (6%)
Frame = +2
Query: 314 NFFRTFSSGDNGG---RAEEWTE-DIVYLDETGDVIFSGKGIRSVEPGLDDHVMVGGLKK 481
NF R + S G ++ EWTE DI YLDE G VI++GKG+RSVEPG+DDH+MVGGLKK
Sbjct: 74 NFLRNYCSVVESGDVKKSREWTEEDIEYLDELGSVIYTGKGVRSVEPGVDDHIMVGGLKK 133
Query: 482 PFSN 493
P N
Sbjct: 134 PILN 137
>gb|EYU27583.1| hypothetical protein MIMGU_mgv1a027117mg, partial [Mimulus
guttatus]
Length = 736
Score = 68.6 bits (166), Expect = 9e-10
Identities = 31/39 (79%), Positives = 35/39 (89%)
Frame = +2
Query: 377 IVYLDETGDVIFSGKGIRSVEPGLDDHVMVGGLKKPFSN 493
I YLDE+G VI+SGKGIRSVEPG+DDHVMVGGL+KP N
Sbjct: 1 IDYLDESGSVIYSGKGIRSVEPGIDDHVMVGGLRKPILN 39