BLASTX nr result
ID: Sinomenium21_contig00032681
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00032681
(568 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007207453.1| hypothetical protein PRUPE_ppa005530mg [Prun... 74 7e-18
ref|XP_006443354.1| hypothetical protein CICLE_v10020067mg [Citr... 75 6e-17
ref|XP_006479054.1| PREDICTED: RNA-binding protein 40-like isofo... 75 6e-17
ref|XP_002319145.2| hypothetical protein POPTR_0013s05120g [Popu... 72 8e-17
ref|XP_004493139.1| PREDICTED: RNA-binding protein 40-like isofo... 76 1e-16
ref|XP_004493140.1| PREDICTED: RNA-binding protein 40-like isofo... 76 1e-16
ref|XP_002270244.2| PREDICTED: RNA-binding protein 40-like [Viti... 75 1e-16
ref|XP_007030218.1| RNA-binding family protein isoform 1 [Theobr... 76 2e-16
ref|XP_007030222.1| RNA-binding family protein isoform 5 [Theobr... 76 2e-16
gb|EXB36255.1| RNA-binding protein 40 [Morus notabilis] 74 3e-16
ref|XP_003632078.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding ... 74 3e-16
emb|CBI36672.3| unnamed protein product [Vitis vinifera] 74 3e-16
ref|XP_002525464.1| RNA binding protein, putative [Ricinus commu... 72 4e-16
ref|XP_003548764.1| PREDICTED: RNA-binding protein 40-like [Glyc... 74 5e-16
ref|XP_002892494.1| RNA recognition motif-containing protein [Ar... 73 5e-16
ref|XP_006417594.1| hypothetical protein EUTSA_v10007645mg [Eutr... 70 4e-15
ref|XP_006650019.1| PREDICTED: RNA-binding protein 40-like [Oryz... 69 5e-15
ref|XP_007161816.1| hypothetical protein PHAVU_001G100700g [Phas... 71 5e-15
ref|XP_003565980.1| PREDICTED: RNA-binding protein 40-like [Brac... 69 1e-14
ref|NP_172394.1| RNA-binding (RRM/RBD/RNP motifs) family protein... 70 1e-14
>ref|XP_007207453.1| hypothetical protein PRUPE_ppa005530mg [Prunus persica]
gi|462403095|gb|EMJ08652.1| hypothetical protein
PRUPE_ppa005530mg [Prunus persica]
Length = 456
Score = 73.6 bits (179), Expect(2) = 7e-18
Identities = 36/49 (73%), Positives = 43/49 (87%)
Frame = -3
Query: 467 GSFFNSVNAAKSCLNVKLMQVGRMRGRAFVTFPSIDIAHRALNLVNGCV 321
GS F SV+AAKS L++KLMQ GRMRG+AFVTFPS+++AH ALNLVNG V
Sbjct: 388 GSLFGSVDAAKSGLSLKLMQEGRMRGQAFVTFPSVELAHYALNLVNGYV 436
Score = 42.7 bits (99), Expect(2) = 7e-18
Identities = 19/21 (90%), Positives = 19/21 (90%)
Frame = -1
Query: 325 VFKDKPMIIQFGRNPVAGKAN 263
VFK KPMIIQFGRNP AGKAN
Sbjct: 436 VFKGKPMIIQFGRNPAAGKAN 456
>ref|XP_006443354.1| hypothetical protein CICLE_v10020067mg [Citrus clementina]
gi|567901734|ref|XP_006443355.1| hypothetical protein
CICLE_v10020067mg [Citrus clementina]
gi|568850729|ref|XP_006479053.1| PREDICTED: RNA-binding
protein 40-like isoform X1 [Citrus sinensis]
gi|557545616|gb|ESR56594.1| hypothetical protein
CICLE_v10020067mg [Citrus clementina]
gi|557545617|gb|ESR56595.1| hypothetical protein
CICLE_v10020067mg [Citrus clementina]
Length = 461
Score = 74.7 bits (182), Expect(2) = 6e-17
Identities = 36/49 (73%), Positives = 42/49 (85%)
Frame = -3
Query: 467 GSFFNSVNAAKSCLNVKLMQVGRMRGRAFVTFPSIDIAHRALNLVNGCV 321
GS F S++AAK L VKLMQ GRMRG+AFVTFPS+++AHRALNLVNG V
Sbjct: 393 GSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLVNGYV 441
Score = 38.5 bits (88), Expect(2) = 6e-17
Identities = 17/21 (80%), Positives = 17/21 (80%)
Frame = -1
Query: 325 VFKDKPMIIQFGRNPVAGKAN 263
VFK KPMIIQFGRNP A K N
Sbjct: 441 VFKGKPMIIQFGRNPAAAKPN 461
>ref|XP_006479054.1| PREDICTED: RNA-binding protein 40-like isoform X2 [Citrus sinensis]
Length = 389
Score = 74.7 bits (182), Expect(2) = 6e-17
Identities = 36/49 (73%), Positives = 42/49 (85%)
Frame = -3
Query: 467 GSFFNSVNAAKSCLNVKLMQVGRMRGRAFVTFPSIDIAHRALNLVNGCV 321
GS F S++AAK L VKLMQ GRMRG+AFVTFPS+++AHRALNLVNG V
Sbjct: 321 GSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLVNGYV 369
Score = 38.5 bits (88), Expect(2) = 6e-17
Identities = 17/21 (80%), Positives = 17/21 (80%)
Frame = -1
Query: 325 VFKDKPMIIQFGRNPVAGKAN 263
VFK KPMIIQFGRNP A K N
Sbjct: 369 VFKGKPMIIQFGRNPAAAKPN 389
>ref|XP_002319145.2| hypothetical protein POPTR_0013s05120g [Populus trichocarpa]
gi|550325000|gb|EEE95068.2| hypothetical protein
POPTR_0013s05120g [Populus trichocarpa]
Length = 479
Score = 72.4 bits (176), Expect(2) = 8e-17
Identities = 35/49 (71%), Positives = 43/49 (87%)
Frame = -3
Query: 467 GSFFNSVNAAKSCLNVKLMQVGRMRGRAFVTFPSIDIAHRALNLVNGCV 321
GS F S++AAKS L+VKLMQ GRMRG+AFVTF S+++AH+ALNLVNG V
Sbjct: 411 GSLFGSIDAAKSGLSVKLMQEGRMRGQAFVTFSSVELAHQALNLVNGYV 459
Score = 40.4 bits (93), Expect(2) = 8e-17
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = -1
Query: 325 VFKDKPMIIQFGRNPVAGKAN 263
VFKDKPMIIQFGRNP A K N
Sbjct: 459 VFKDKPMIIQFGRNPSAAKPN 479
>ref|XP_004493139.1| PREDICTED: RNA-binding protein 40-like isoform X1 [Cicer arietinum]
Length = 459
Score = 75.9 bits (185), Expect(2) = 1e-16
Identities = 38/49 (77%), Positives = 41/49 (83%)
Frame = -3
Query: 467 GSFFNSVNAAKSCLNVKLMQVGRMRGRAFVTFPSIDIAHRALNLVNGCV 321
GSFF S AAKS L VKLMQ GRMRG+AFVTFPS ++AHRALNLVNG V
Sbjct: 391 GSFFGSTEAAKSGLQVKLMQEGRMRGQAFVTFPSTELAHRALNLVNGYV 439
Score = 36.6 bits (83), Expect(2) = 1e-16
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = -1
Query: 325 VFKDKPMIIQFGRNPVAGK 269
VFK KPMIIQFGRNP A K
Sbjct: 439 VFKGKPMIIQFGRNPAAAK 457
>ref|XP_004493140.1| PREDICTED: RNA-binding protein 40-like isoform X2 [Cicer arietinum]
Length = 439
Score = 75.9 bits (185), Expect(2) = 1e-16
Identities = 38/49 (77%), Positives = 41/49 (83%)
Frame = -3
Query: 467 GSFFNSVNAAKSCLNVKLMQVGRMRGRAFVTFPSIDIAHRALNLVNGCV 321
GSFF S AAKS L VKLMQ GRMRG+AFVTFPS ++AHRALNLVNG V
Sbjct: 371 GSFFGSTEAAKSGLQVKLMQEGRMRGQAFVTFPSTELAHRALNLVNGYV 419
Score = 36.6 bits (83), Expect(2) = 1e-16
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = -1
Query: 325 VFKDKPMIIQFGRNPVAGK 269
VFK KPMIIQFGRNP A K
Sbjct: 419 VFKGKPMIIQFGRNPAAAK 437
>ref|XP_002270244.2| PREDICTED: RNA-binding protein 40-like [Vitis vinifera]
gi|298205172|emb|CBI17231.3| unnamed protein product
[Vitis vinifera]
Length = 463
Score = 75.5 bits (184), Expect(2) = 1e-16
Identities = 37/49 (75%), Positives = 43/49 (87%)
Frame = -3
Query: 467 GSFFNSVNAAKSCLNVKLMQVGRMRGRAFVTFPSIDIAHRALNLVNGCV 321
GS F SV+AAKS L+VKLMQ GRMRG+AFVTFPS+++AH ALNLVNG V
Sbjct: 395 GSLFGSVDAAKSGLSVKLMQEGRMRGQAFVTFPSVELAHHALNLVNGYV 443
Score = 36.6 bits (83), Expect(2) = 1e-16
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = -1
Query: 325 VFKDKPMIIQFGRNPVAGK 269
VFK KPMIIQFGRNP A K
Sbjct: 443 VFKGKPMIIQFGRNPAAAK 461
>ref|XP_007030218.1| RNA-binding family protein isoform 1 [Theobroma cacao]
gi|590641397|ref|XP_007030219.1| RNA-binding family
protein isoform 1 [Theobroma cacao]
gi|590641400|ref|XP_007030220.1| RNA-binding family
protein isoform 1 [Theobroma cacao]
gi|508718823|gb|EOY10720.1| RNA-binding family protein
isoform 1 [Theobroma cacao] gi|508718824|gb|EOY10721.1|
RNA-binding family protein isoform 1 [Theobroma cacao]
gi|508718825|gb|EOY10722.1| RNA-binding family protein
isoform 1 [Theobroma cacao]
Length = 479
Score = 75.9 bits (185), Expect(2) = 2e-16
Identities = 36/49 (73%), Positives = 43/49 (87%)
Frame = -3
Query: 467 GSFFNSVNAAKSCLNVKLMQVGRMRGRAFVTFPSIDIAHRALNLVNGCV 321
GS F S++AAKS LNVKLMQ GRMRG+AFVTFP++++AH ALNLVNG V
Sbjct: 411 GSLFGSIDAAKSGLNVKLMQEGRMRGQAFVTFPAVELAHHALNLVNGYV 459
Score = 35.8 bits (81), Expect(2) = 2e-16
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = -1
Query: 325 VFKDKPMIIQFGRNPVAGKAN 263
VFK KP+IIQFGRNP K N
Sbjct: 459 VFKGKPIIIQFGRNPATAKTN 479
>ref|XP_007030222.1| RNA-binding family protein isoform 5 [Theobroma cacao]
gi|508718827|gb|EOY10724.1| RNA-binding family protein
isoform 5 [Theobroma cacao]
Length = 345
Score = 75.9 bits (185), Expect(2) = 2e-16
Identities = 36/49 (73%), Positives = 43/49 (87%)
Frame = -3
Query: 467 GSFFNSVNAAKSCLNVKLMQVGRMRGRAFVTFPSIDIAHRALNLVNGCV 321
GS F S++AAKS LNVKLMQ GRMRG+AFVTFP++++AH ALNLVNG V
Sbjct: 277 GSLFGSIDAAKSGLNVKLMQEGRMRGQAFVTFPAVELAHHALNLVNGYV 325
Score = 35.8 bits (81), Expect(2) = 2e-16
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = -1
Query: 325 VFKDKPMIIQFGRNPVAGKAN 263
VFK KP+IIQFGRNP K N
Sbjct: 325 VFKGKPIIIQFGRNPATAKTN 345
>gb|EXB36255.1| RNA-binding protein 40 [Morus notabilis]
Length = 486
Score = 74.3 bits (181), Expect(2) = 3e-16
Identities = 35/47 (74%), Positives = 40/47 (85%)
Frame = -3
Query: 467 GSFFNSVNAAKSCLNVKLMQVGRMRGRAFVTFPSIDIAHRALNLVNG 327
GS F S + AKS LNVKLMQ GRMRG+AFVTFPS+++AH ALNLVNG
Sbjct: 416 GSLFGSTDVAKSSLNVKLMQEGRMRGQAFVTFPSVELAHHALNLVNG 462
Score = 36.6 bits (83), Expect(2) = 3e-16
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = -1
Query: 322 FKDKPMIIQFGRNPVAGKAN 263
FK KPM+IQFGRNP A K N
Sbjct: 465 FKGKPMVIQFGRNPAAAKEN 484
>ref|XP_003632078.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 40-like [Vitis
vinifera]
Length = 463
Score = 74.3 bits (181), Expect(2) = 3e-16
Identities = 36/49 (73%), Positives = 43/49 (87%)
Frame = -3
Query: 467 GSFFNSVNAAKSCLNVKLMQVGRMRGRAFVTFPSIDIAHRALNLVNGCV 321
GS F SV+AAKS L+VKLMQ GRMRG+AFVTFPS+++AH ALN+VNG V
Sbjct: 395 GSLFGSVDAAKSGLSVKLMQEGRMRGQAFVTFPSVELAHHALNVVNGYV 443
Score = 36.6 bits (83), Expect(2) = 3e-16
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = -1
Query: 325 VFKDKPMIIQFGRNPVAGK 269
VFK KPMIIQFGRNP A K
Sbjct: 443 VFKGKPMIIQFGRNPAAAK 461
>emb|CBI36672.3| unnamed protein product [Vitis vinifera]
Length = 263
Score = 74.3 bits (181), Expect(2) = 3e-16
Identities = 36/49 (73%), Positives = 43/49 (87%)
Frame = -3
Query: 467 GSFFNSVNAAKSCLNVKLMQVGRMRGRAFVTFPSIDIAHRALNLVNGCV 321
GS F SV+AAKS L+VKLMQ GRMRG+AFVTFPS+++AH ALN+VNG V
Sbjct: 195 GSLFGSVDAAKSGLSVKLMQEGRMRGQAFVTFPSVELAHHALNVVNGYV 243
Score = 36.6 bits (83), Expect(2) = 3e-16
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = -1
Query: 325 VFKDKPMIIQFGRNPVAGK 269
VFK KPMIIQFGRNP A K
Sbjct: 243 VFKGKPMIIQFGRNPAAAK 261
>ref|XP_002525464.1| RNA binding protein, putative [Ricinus communis]
gi|223535277|gb|EEF36954.1| RNA binding protein,
putative [Ricinus communis]
Length = 450
Score = 72.4 bits (176), Expect(2) = 4e-16
Identities = 35/49 (71%), Positives = 43/49 (87%)
Frame = -3
Query: 467 GSFFNSVNAAKSCLNVKLMQVGRMRGRAFVTFPSIDIAHRALNLVNGCV 321
GS F S++AAK L+VKLMQ GRMRG+AFVTFPS+++AH+ALNLVNG V
Sbjct: 382 GSLFGSLDAAKVGLSVKLMQEGRMRGQAFVTFPSVELAHQALNLVNGYV 430
Score = 38.1 bits (87), Expect(2) = 4e-16
Identities = 17/21 (80%), Positives = 17/21 (80%)
Frame = -1
Query: 325 VFKDKPMIIQFGRNPVAGKAN 263
VFK KPMIIQFGRNP A K N
Sbjct: 430 VFKGKPMIIQFGRNPSASKTN 450
>ref|XP_003548764.1| PREDICTED: RNA-binding protein 40-like [Glycine max]
Length = 456
Score = 74.3 bits (181), Expect(2) = 5e-16
Identities = 36/49 (73%), Positives = 41/49 (83%)
Frame = -3
Query: 467 GSFFNSVNAAKSCLNVKLMQVGRMRGRAFVTFPSIDIAHRALNLVNGCV 321
GS F S+ AAKS L VKLMQ GRMRG+AF+TFPSI++AH ALNLVNG V
Sbjct: 388 GSLFGSIEAAKSGLQVKLMQEGRMRGQAFITFPSIELAHHALNLVNGYV 436
Score = 35.8 bits (81), Expect(2) = 5e-16
Identities = 16/20 (80%), Positives = 16/20 (80%)
Frame = -1
Query: 325 VFKDKPMIIQFGRNPVAGKA 266
V K KPMIIQFGRNP A KA
Sbjct: 436 VLKGKPMIIQFGRNPAAAKA 455
>ref|XP_002892494.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata] gi|297338336|gb|EFH68753.1| RNA recognition
motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 438
Score = 72.8 bits (177), Expect(2) = 5e-16
Identities = 34/49 (69%), Positives = 42/49 (85%)
Frame = -3
Query: 467 GSFFNSVNAAKSCLNVKLMQVGRMRGRAFVTFPSIDIAHRALNLVNGCV 321
GS F S+ AAK+ L V+LMQ GRMRG+AF+TFPS+++AHRALNLVNG V
Sbjct: 369 GSQFESIEAAKTSLGVRLMQEGRMRGQAFLTFPSVEVAHRALNLVNGFV 417
Score = 37.4 bits (85), Expect(2) = 5e-16
Identities = 17/21 (80%), Positives = 17/21 (80%)
Frame = -1
Query: 325 VFKDKPMIIQFGRNPVAGKAN 263
VFK KPMIIQFGRNP A K N
Sbjct: 417 VFKGKPMIIQFGRNPGAAKPN 437
>ref|XP_006417594.1| hypothetical protein EUTSA_v10007645mg [Eutrema salsugineum]
gi|557095365|gb|ESQ35947.1| hypothetical protein
EUTSA_v10007645mg [Eutrema salsugineum]
Length = 443
Score = 69.7 bits (169), Expect(2) = 4e-15
Identities = 34/49 (69%), Positives = 40/49 (81%)
Frame = -3
Query: 467 GSFFNSVNAAKSCLNVKLMQVGRMRGRAFVTFPSIDIAHRALNLVNGCV 321
GS F S+ AAKS L V+LMQ GRMRG+AF+TFPS++ A RALNLVNG V
Sbjct: 374 GSQFGSIEAAKSSLGVRLMQEGRMRGQAFLTFPSVEFAQRALNLVNGFV 422
Score = 37.4 bits (85), Expect(2) = 4e-15
Identities = 17/21 (80%), Positives = 17/21 (80%)
Frame = -1
Query: 325 VFKDKPMIIQFGRNPVAGKAN 263
VFK KPMIIQFGRNP A K N
Sbjct: 422 VFKGKPMIIQFGRNPGAAKPN 442
>ref|XP_006650019.1| PREDICTED: RNA-binding protein 40-like [Oryza brachyantha]
Length = 460
Score = 69.3 bits (168), Expect(2) = 5e-15
Identities = 31/49 (63%), Positives = 42/49 (85%)
Frame = -3
Query: 467 GSFFNSVNAAKSCLNVKLMQVGRMRGRAFVTFPSIDIAHRALNLVNGCV 321
GS F ++ A+S L++KLMQ GRMRG+AFVTFPS+++A RAL+LV+GCV
Sbjct: 392 GSLFENMEIARSSLSIKLMQEGRMRGQAFVTFPSVELAQRALSLVHGCV 440
Score = 37.4 bits (85), Expect(2) = 5e-15
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = -1
Query: 325 VFKDKPMIIQFGRNPVAGKAN 263
VFK KPMIIQFGRNP A K++
Sbjct: 440 VFKGKPMIIQFGRNPAANKSS 460
>ref|XP_007161816.1| hypothetical protein PHAVU_001G100700g [Phaseolus vulgaris]
gi|561035280|gb|ESW33810.1| hypothetical protein
PHAVU_001G100700g [Phaseolus vulgaris]
Length = 459
Score = 70.9 bits (172), Expect(2) = 5e-15
Identities = 36/49 (73%), Positives = 40/49 (81%)
Frame = -3
Query: 467 GSFFNSVNAAKSCLNVKLMQVGRMRGRAFVTFPSIDIAHRALNLVNGCV 321
GS F SV AAKS L VKLMQ GRMRG+AF+TFPSI++AH ALN VNG V
Sbjct: 392 GSLFGSVEAAKSGLQVKLMQEGRMRGQAFLTFPSIELAHLALNRVNGYV 440
Score = 35.8 bits (81), Expect(2) = 5e-15
Identities = 16/20 (80%), Positives = 16/20 (80%)
Frame = -1
Query: 325 VFKDKPMIIQFGRNPVAGKA 266
V K KPMIIQFGRNP A KA
Sbjct: 440 VLKGKPMIIQFGRNPAAAKA 459
>ref|XP_003565980.1| PREDICTED: RNA-binding protein 40-like [Brachypodium distachyon]
Length = 455
Score = 68.9 bits (167), Expect(2) = 1e-14
Identities = 33/49 (67%), Positives = 42/49 (85%)
Frame = -3
Query: 467 GSFFNSVNAAKSCLNVKLMQVGRMRGRAFVTFPSIDIAHRALNLVNGCV 321
GS F S++AAKS L++KLMQ GRMRG+AFVTFPS+++A RALNL +G V
Sbjct: 387 GSVFESMDAAKSGLSIKLMQEGRMRGQAFVTFPSVELAQRALNLTHGYV 435
Score = 36.6 bits (83), Expect(2) = 1e-14
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = -1
Query: 325 VFKDKPMIIQFGRNPVAGKAN 263
VFK KPMIIQFGR+P A KA+
Sbjct: 435 VFKGKPMIIQFGRSPAASKAS 455
>ref|NP_172394.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana] gi|20258828|gb|AAM13896.1| unknown protein
[Arabidopsis thaliana] gi|21689717|gb|AAM67480.1|
unknown protein [Arabidopsis thaliana]
gi|332190295|gb|AEE28416.1| RNA-binding (RRM/RBD/RNP
motifs) family protein [Arabidopsis thaliana]
Length = 442
Score = 70.5 bits (171), Expect(2) = 1e-14
Identities = 34/49 (69%), Positives = 40/49 (81%)
Frame = -3
Query: 467 GSFFNSVNAAKSCLNVKLMQVGRMRGRAFVTFPSIDIAHRALNLVNGCV 321
GS F S AKS L V+LMQ GRMRG+AF+TFPS+++AHRALNLVNG V
Sbjct: 373 GSQFESSEVAKSSLGVRLMQEGRMRGQAFLTFPSVEVAHRALNLVNGFV 421
Score = 35.0 bits (79), Expect(2) = 1e-14
Identities = 16/21 (76%), Positives = 16/21 (76%)
Frame = -1
Query: 325 VFKDKPMIIQFGRNPVAGKAN 263
VFK KPMIIQFGR P A K N
Sbjct: 421 VFKGKPMIIQFGRTPGAAKPN 441