BLASTX nr result
ID: Sinomenium21_contig00032499
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00032499
(579 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAA30522.1| ORF 143 [Glycine max] 160 1e-61
gb|AFK49064.1| unknown [Lotus japonicus] 195 8e-48
ref|NP_862801.1| hypothetical protein CafeCp090 [Calycanthus flo... 140 2e-31
ref|YP_358631.1| hypothetical protein PhapfoPp085 [Phalaenopsis ... 128 1e-27
ref|YP_001109550.1| hypothetical protein Poptr_cp072 [Populus tr... 121 2e-25
tpg|DAA60526.1| TPA: hypothetical protein ZEAMMB73_222606 [Zea m... 103 3e-20
ref|XP_002519781.1| conserved hypothetical protein [Ricinus comm... 102 7e-20
gb|AFW69302.1| hypothetical protein ZEAMMB73_079346 [Zea mays] 97 2e-18
ref|YP_001312254.1| hypothetical protein CYtaCp089 [Cycas taitun... 75 3e-15
ref|YP_007474607.1| hypothetical_protein (chloroplast) [Cycas re... 70 9e-14
ref|XP_002894684.1| hypothetical protein ARALYDRAFT_892903 [Arab... 82 1e-13
gb|AFW59336.1| hypothetical protein ZEAMMB73_738558 [Zea mays] 81 2e-13
gb|AFS35523.1| ribosomal protein S12, partial [Fragaria moschata] 80 5e-13
ref|XP_002449659.1| hypothetical protein SORBIDRAFT_05g021128 [S... 66 7e-12
ref|YP_009002279.1| ribosomal protein S12 (chloroplast) [Pinguic... 73 5e-11
ref|YP_001152253.1| ORF40x [Pinus koraiensis] gi|145048878|gb|AB... 71 2e-10
>emb|CAA30522.1| ORF 143 [Glycine max]
Length = 143
Score = 160 bits (405), Expect(2) = 1e-61
Identities = 77/83 (92%), Positives = 79/83 (95%)
Frame = +3
Query: 330 LHYFGNPRTQSYGYVKYRISNPSRKRRETDTQFKVSKQNSILDLIDTYGILWKAVFDESR 509
LHYFGNPRTQSYGYVKYRISNPSRKR TDTQF+VSKQNSILD+IDTY ILWKAVFDESR
Sbjct: 60 LHYFGNPRTQSYGYVKYRISNPSRKRGGTDTQFQVSKQNSILDIIDTYRILWKAVFDESR 119
Query: 510 MYGLEGDLSYLSRSTLQYGVKKP 578
MYGLEGDLSYLSRSTLQYG KKP
Sbjct: 120 MYGLEGDLSYLSRSTLQYGAKKP 142
Score = 102 bits (255), Expect(2) = 1e-61
Identities = 53/62 (85%), Positives = 54/62 (87%)
Frame = +1
Query: 148 MRQKIFFLKRFDSELLCVQGPILKSFQRFSLTLSVSTNNSKYLDFFRTGPSQIAMIRSTS 327
MRQKIFFLK+FDSEL VQGPI K FQRFSLTLSVSTNNSK LDFFR GPSQIAMIRST
Sbjct: 1 MRQKIFFLKKFDSELRYVQGPIWKEFQRFSLTLSVSTNNSKCLDFFRIGPSQIAMIRSTL 60
Query: 328 FY 333
Y
Sbjct: 61 HY 62
>gb|AFK49064.1| unknown [Lotus japonicus]
Length = 128
Score = 195 bits (495), Expect = 8e-48
Identities = 103/129 (79%), Positives = 109/129 (84%)
Frame = +3
Query: 192 IMCPRSNIEIISEVFPDFVRVNKQFEIPRLF*NRSESNSNDSKHFFLHYFGNPRTQSYGY 371
++CPRSNIE ISEVF DFVRVNKQFE+PRLF R + LHYF N RTQSYGY
Sbjct: 1 MICPRSNIERISEVFLDFVRVNKQFEMPRLF--RLGPSQIAMIRSTLHYFENLRTQSYGY 58
Query: 372 VKYRISNPSRKRRETDTQFKVSKQNSILDLIDTYGILWKAVFDESRMYGLEGDLSYLSRS 551
VKYRISNPS+KRRETDTQF+VSKQNSILDLIDTY IL KAVFDESRMYGLEGDLSYLSRS
Sbjct: 59 VKYRISNPSKKRRETDTQFQVSKQNSILDLIDTYRILRKAVFDESRMYGLEGDLSYLSRS 118
Query: 552 TLQYGVKKP 578
TLQYG KKP
Sbjct: 119 TLQYGAKKP 127
>ref|NP_862801.1| hypothetical protein CafeCp090 [Calycanthus floridus var. glaucus]
gi|32480905|ref|NP_862814.1| hypothetical protein
CafeCp092 [Calycanthus floridus var. glaucus]
gi|75146241|sp|Q7Y618.1|YCX1_CALFG RecName:
Full=Uncharacterized 8.8 kDa protein in rps12-tRNA-Val
intergenic region gi|32399427|emb|CAD28768.1|
hypothetical protein [Calycanthus floridus var. glaucus]
gi|32399441|emb|CAD28782.1| hypothetical protein
[Calycanthus floridus var. glaucus]
Length = 75
Score = 140 bits (353), Expect = 2e-31
Identities = 72/75 (96%), Positives = 72/75 (96%)
Frame = +1
Query: 148 MRQKIFFLKRFDSELLCVQGPILKSFQRFSLTLSVSTNNSKYLDFFRTGPSQIAMIRSTS 327
MRQKIFFLKRFDSELL VQG ILKSFQRFSLTLSVSTNNSKYLDFFRTGPSQIA IRSTS
Sbjct: 1 MRQKIFFLKRFDSELLYVQGSILKSFQRFSLTLSVSTNNSKYLDFFRTGPSQIATIRSTS 60
Query: 328 FYTISETQGLNRMDM 372
FYTISETQGLNRMDM
Sbjct: 61 FYTISETQGLNRMDM 75
>ref|YP_358631.1| hypothetical protein PhapfoPp085 [Phalaenopsis aphrodite subsp.
formosana] gi|58802847|gb|AAW82567.1| hypothetical
protein [Phalaenopsis aphrodite subsp. formosana]
Length = 77
Score = 128 bits (321), Expect = 1e-27
Identities = 66/75 (88%), Positives = 68/75 (90%)
Frame = -2
Query: 329 KEVLRIIAI*LGPVLKKSRYFELFVDTDKVRENL*NDFNIGPWTHNSSESNLFRKKIFCL 150
KEVLRIIAI LGPVLKKSRYFELFVDTDK RENL N NIGPWT++SSESNLFRKK FCL
Sbjct: 3 KEVLRIIAIGLGPVLKKSRYFELFVDTDKGRENLLNYSNIGPWTYSSSESNLFRKKSFCL 62
Query: 149 MVACSSPLTKLSLLG 105
MVACSSPL KLSLLG
Sbjct: 63 MVACSSPLPKLSLLG 77
>ref|YP_001109550.1| hypothetical protein Poptr_cp072 [Populus trichocarpa]
gi|134093268|ref|YP_001109569.1| hypothetical protein
Poptr_cp092 [Populus trichocarpa]
gi|133712111|gb|ABO36754.1| conserved hypothetical
protein [Populus trichocarpa]
gi|133712130|gb|ABO36773.1| conserved hypothetical
protein [Populus trichocarpa]
Length = 65
Score = 121 bits (303), Expect = 2e-25
Identities = 61/65 (93%), Positives = 62/65 (95%)
Frame = +1
Query: 238 LTLSVSTNNSKYLDFFRTGPSQIAMIRSTSFYTISETQGLNRMDM*NTGFPILAGKGGKR 417
+TLSVSTNNSK LDFFR GPSQIAMIRSTSFYTISETQGLNRMDM NTGFPILAGKGGKR
Sbjct: 1 MTLSVSTNNSKCLDFFRAGPSQIAMIRSTSFYTISETQGLNRMDMENTGFPILAGKGGKR 60
Query: 418 ILNLK 432
ILNLK
Sbjct: 61 ILNLK 65
>tpg|DAA60526.1| TPA: hypothetical protein ZEAMMB73_222606 [Zea mays]
Length = 57
Score = 103 bits (258), Expect = 3e-20
Identities = 50/54 (92%), Positives = 51/54 (94%)
Frame = +3
Query: 417 DTQFKVSKQNSILDLIDTYGILWKAVFDESRMYGLEGDLSYLSRSTLQYGVKKP 578
DTQFKVSKQNSILDLID Y ILWKAVFDESRMYGLEGDLSY+SRSTLQYG KKP
Sbjct: 2 DTQFKVSKQNSILDLIDPYRILWKAVFDESRMYGLEGDLSYISRSTLQYGAKKP 55
>ref|XP_002519781.1| conserved hypothetical protein [Ricinus communis]
gi|223541020|gb|EEF42577.1| conserved hypothetical
protein [Ricinus communis]
Length = 286
Score = 102 bits (254), Expect = 7e-20
Identities = 50/55 (90%), Positives = 51/55 (92%)
Frame = -2
Query: 497 EYGFPQNSICIYEIEYGILFTHFKLSIRFPPFPARIGNPVFYISIRLSPWVSEIV 333
EYGF QNSICIYEIEYGILFTHFKLSI PPFPARIGNPVFYISIRLSP VS+IV
Sbjct: 232 EYGFLQNSICIYEIEYGILFTHFKLSICSPPFPARIGNPVFYISIRLSPRVSKIV 286
>gb|AFW69302.1| hypothetical protein ZEAMMB73_079346 [Zea mays]
Length = 53
Score = 97.4 bits (241), Expect = 2e-18
Identities = 47/52 (90%), Positives = 47/52 (90%)
Frame = -2
Query: 506 TFIEYGFPQNSICIYEIEYGILFTHFKLSIRFPPFPARIGNPVFYISIRLSP 351
TFIEYGFPQNSI IYEIEYGILFTHFKLSI FPPFPAR GNPVF ISIR SP
Sbjct: 2 TFIEYGFPQNSIGIYEIEYGILFTHFKLSICFPPFPARTGNPVFSISIRSSP 53
>ref|YP_001312254.1| hypothetical protein CYtaCp089 [Cycas taitungensis]
gi|150251552|ref|YP_001312284.1| hypothetical protein
CYtaCp120 [Cycas taitungensis]
gi|149941571|dbj|BAF64995.1| hypothetical protein
(chloroplast) [Cycas taitungensis]
gi|149941602|dbj|BAF65026.1| hypothetical protein
(chloroplast) [Cycas taitungensis]
Length = 64
Score = 74.7 bits (182), Expect(2) = 3e-15
Identities = 38/50 (76%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
Frame = -1
Query: 414 FPSFSC*DWKSCILHIHTIESLGFRNSVKR-SASNHCYLTRTCSKKVEVF 268
F FSC DWKS ILHI TI+SLG + SVK+ S SNHCYLTRTCSKKVEVF
Sbjct: 15 FLPFSCYDWKSRILHICTIKSLGSQKSVKKKSVSNHCYLTRTCSKKVEVF 64
Score = 33.1 bits (74), Expect(2) = 3e-15
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -2
Query: 452 YGILFTHFKLSIRFPPF 402
Y ILFTHFKLSIRF PF
Sbjct: 2 YIILFTHFKLSIRFLPF 18
>ref|YP_007474607.1| hypothetical_protein (chloroplast) [Cycas revoluta]
gi|372863084|gb|AEX99157.1| hypothetical_protein
(chloroplast) [Cycas revoluta]
Length = 60
Score = 69.7 bits (169), Expect(2) = 9e-14
Identities = 36/49 (73%), Positives = 38/49 (77%)
Frame = -1
Query: 414 FPSFSC*DWKSCILHIHTIESLGFRNSVKRSASNHCYLTRTCSKKVEVF 268
F FSC DWKS ILHI TI+SLG + SV SNHCYLTRTCSKKVEVF
Sbjct: 15 FLPFSCYDWKSRILHICTIKSLGSQKSV---VSNHCYLTRTCSKKVEVF 60
Score = 33.1 bits (74), Expect(2) = 9e-14
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -2
Query: 452 YGILFTHFKLSIRFPPF 402
Y ILFTHFKLSIRF PF
Sbjct: 2 YIILFTHFKLSIRFLPF 18
>ref|XP_002894684.1| hypothetical protein ARALYDRAFT_892903 [Arabidopsis lyrata subsp.
lyrata] gi|297340526|gb|EFH70943.1| hypothetical protein
ARALYDRAFT_892903 [Arabidopsis lyrata subsp. lyrata]
Length = 60
Score = 81.6 bits (200), Expect = 1e-13
Identities = 41/45 (91%), Positives = 42/45 (93%)
Frame = +1
Query: 238 LTLSVSTNNSKYLDFFRTGPSQIAMIRSTSFYTISETQGLNRMDM 372
+TLSVSTNNSK LDFFRT PSQIAMIRST FYTISETQGLNRMDM
Sbjct: 16 VTLSVSTNNSKCLDFFRTDPSQIAMIRSTYFYTISETQGLNRMDM 60
>gb|AFW59336.1| hypothetical protein ZEAMMB73_738558 [Zea mays]
Length = 52
Score = 81.3 bits (199), Expect = 2e-13
Identities = 38/43 (88%), Positives = 40/43 (93%)
Frame = +3
Query: 210 NIEIISEVFPDFVRVNKQFEIPRLF*NRSESNSNDSKHFFLHY 338
N+EI+SEVFP FVRVNKQFEIPRLF NRSESNSNDSKHFF HY
Sbjct: 5 NMEILSEVFPYFVRVNKQFEIPRLFQNRSESNSNDSKHFFFHY 47
>gb|AFS35523.1| ribosomal protein S12, partial [Fragaria moschata]
Length = 40
Score = 79.7 bits (195), Expect = 5e-13
Identities = 38/39 (97%), Positives = 38/39 (97%)
Frame = +3
Query: 462 IDTYGILWKAVFDESRMYGLEGDLSYLSRSTLQYGVKKP 578
IDTY ILWKAVFDESRMYGLEGDLSYLSRSTLQYGVKKP
Sbjct: 1 IDTYIILWKAVFDESRMYGLEGDLSYLSRSTLQYGVKKP 39
>ref|XP_002449659.1| hypothetical protein SORBIDRAFT_05g021128 [Sorghum bicolor]
gi|241935502|gb|EES08647.1| hypothetical protein
SORBIDRAFT_05g021128 [Sorghum bicolor]
Length = 67
Score = 66.2 bits (160), Expect(2) = 7e-12
Identities = 35/46 (76%), Positives = 39/46 (84%)
Frame = +1
Query: 190 LLCVQGPILKSFQRFSLTLSVSTNNSKYLDFFRTGPSQIAMIRSTS 327
L+C + I K F+RFSLTLSVSTN+SKYLDF R GPSQIAMIRSTS
Sbjct: 4 LICPRS-IWKLFERFSLTLSVSTNSSKYLDFLRIGPSQIAMIRSTS 48
Score = 30.0 bits (66), Expect(2) = 7e-12
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = +2
Query: 320 ALLFTLFRKPKDSIVWICKI 379
+L TLF+K KDSIVWI KI
Sbjct: 48 SLSITLFQKCKDSIVWIWKI 67
>ref|YP_009002279.1| ribosomal protein S12 (chloroplast) [Pinguicula ehlersiae]
gi|575882162|emb|CDL78835.1| ribosomal protein S12
(chloroplast) [Pinguicula ehlersiae]
Length = 156
Score = 73.2 bits (178), Expect = 5e-11
Identities = 36/40 (90%), Positives = 37/40 (92%)
Frame = +3
Query: 459 LIDTYGILWKAVFDESRMYGLEGDLSYLSRSTLQYGVKKP 578
+IDTY IL KAVFDESRMYGL GDLSYLSRSTLQYGVKKP
Sbjct: 116 IIDTYRILRKAVFDESRMYGLGGDLSYLSRSTLQYGVKKP 155
>ref|YP_001152253.1| ORF40x [Pinus koraiensis] gi|145048878|gb|ABP35493.1| ORF40x [Pinus
koraiensis]
Length = 40
Score = 70.9 bits (172), Expect = 2e-10
Identities = 30/38 (78%), Positives = 32/38 (84%)
Frame = +1
Query: 466 IHMEFCGKPYSMKVVCTAWREIFHIFRDPPYNMGSKSQ 579
+ +E CGKPYS KVVCT WREIFH FRDPPYNM SKSQ
Sbjct: 1 MQIESCGKPYSTKVVCTVWREIFHTFRDPPYNMESKSQ 38