BLASTX nr result

ID: Sinomenium21_contig00032256 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00032256
         (283 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284178.1| PREDICTED: cyclin-H1-1 [Vitis vinifera] gi|2...    57   3e-06
ref|XP_007030955.1| Cyclin H,1 isoform 3 [Theobroma cacao] gi|50...    56   6e-06
ref|XP_007030954.1| Cyclin H,1 isoform 2 [Theobroma cacao] gi|50...    56   6e-06
ref|XP_007030953.1| Cyclin-H1-1 isoform 1 [Theobroma cacao] gi|5...    56   6e-06
ref|NP_001051203.1| Os03g0737600 [Oryza sativa Japonica Group] g...    55   8e-06
gb|AAR07076.1| cyclin H-1 [Oryza sativa Japonica Group]                55   8e-06

>ref|XP_002284178.1| PREDICTED: cyclin-H1-1 [Vitis vinifera]
           gi|296089659|emb|CBI39478.3| unnamed protein product
           [Vitis vinifera]
          Length = 335

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 24/35 (68%), Positives = 29/35 (82%)
 Frame = -1

Query: 283 NAIDTWVKKLKIPTAKDMRHIDRKLTSCLDPSSQD 179
           NAID+WV K ++PT +DM+HIDRKL  CLDPSS D
Sbjct: 274 NAIDSWVMKHQVPTTEDMKHIDRKLKFCLDPSSHD 308


>ref|XP_007030955.1| Cyclin H,1 isoform 3 [Theobroma cacao] gi|508719560|gb|EOY11457.1|
           Cyclin H,1 isoform 3 [Theobroma cacao]
          Length = 332

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 25/35 (71%), Positives = 28/35 (80%)
 Frame = -1

Query: 283 NAIDTWVKKLKIPTAKDMRHIDRKLTSCLDPSSQD 179
           NAIDTWV+K K PT KDM+HI+RKL SC   SSQD
Sbjct: 272 NAIDTWVRKYKFPTEKDMKHINRKLKSCWGHSSQD 306


>ref|XP_007030954.1| Cyclin H,1 isoform 2 [Theobroma cacao] gi|508719559|gb|EOY11456.1|
           Cyclin H,1 isoform 2 [Theobroma cacao]
          Length = 331

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 25/35 (71%), Positives = 28/35 (80%)
 Frame = -1

Query: 283 NAIDTWVKKLKIPTAKDMRHIDRKLTSCLDPSSQD 179
           NAIDTWV+K K PT KDM+HI+RKL SC   SSQD
Sbjct: 272 NAIDTWVRKYKFPTEKDMKHINRKLKSCWGHSSQD 306


>ref|XP_007030953.1| Cyclin-H1-1 isoform 1 [Theobroma cacao] gi|508719558|gb|EOY11455.1|
           Cyclin-H1-1 isoform 1 [Theobroma cacao]
          Length = 426

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 25/35 (71%), Positives = 28/35 (80%)
 Frame = -1

Query: 283 NAIDTWVKKLKIPTAKDMRHIDRKLTSCLDPSSQD 179
           NAIDTWV+K K PT KDM+HI+RKL SC   SSQD
Sbjct: 272 NAIDTWVRKYKFPTEKDMKHINRKLKSCWGHSSQD 306


>ref|NP_001051203.1| Os03g0737600 [Oryza sativa Japonica Group]
           gi|122246784|sp|Q10D80.1|CCH11_ORYSJ RecName:
           Full=Cyclin-H1-1; Short=CycH1;1; AltName:
           Full=Cyclin-H-1; Short=CycH-1 gi|9796396|dbj|BAB11694.1|
           cyclin H-1 [Oryza sativa] gi|108710969|gb|ABF98764.1|
           Cyclin, N-terminal domain containing protein, expressed
           [Oryza sativa Japonica Group]
           gi|113549674|dbj|BAF13117.1| Os03g0737600 [Oryza sativa
           Japonica Group] gi|215678822|dbj|BAG95259.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|215740606|dbj|BAG97262.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218193718|gb|EEC76145.1| hypothetical protein
           OsI_13435 [Oryza sativa Indica Group]
           gi|222625758|gb|EEE59890.1| hypothetical protein
           OsJ_12494 [Oryza sativa Japonica Group]
          Length = 330

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 26/35 (74%), Positives = 29/35 (82%)
 Frame = -1

Query: 283 NAIDTWVKKLKIPTAKDMRHIDRKLTSCLDPSSQD 179
           N I+  V++LKIPT KDMRHIDRKL  CLDPSSQD
Sbjct: 272 NMINYLVEQLKIPTPKDMRHIDRKLKHCLDPSSQD 306


>gb|AAR07076.1| cyclin H-1 [Oryza sativa Japonica Group]
          Length = 328

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 26/35 (74%), Positives = 29/35 (82%)
 Frame = -1

Query: 283 NAIDTWVKKLKIPTAKDMRHIDRKLTSCLDPSSQD 179
           N I+  V++LKIPT KDMRHIDRKL  CLDPSSQD
Sbjct: 272 NMINYLVEQLKIPTPKDMRHIDRKLKHCLDPSSQD 306


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