BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00032106
         (731 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003561800.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin-60...    60   8e-07
sp|P0CG73.1|UBI1P_CANAL RecName: Full=Polyubiquitin; Contains: R...    57   7e-06
ref|XP_004341200.1| polyubiquitin, putative [Acanthamoeba castel...    57   9e-06
emb|CAE00783.1| polyubiquitin homolog [Sordaria macrospora]            57   9e-06
ref|XP_003350608.1| hypothetical protein SMAC_07925 [Sordaria ma...    57   9e-06
emb|CAA11269.1| polyubiquitin [Nicotiana tabacum]                      57   9e-06
emb|CAA60629.1| unnamed protein product [Acanthamoeba sp. 4b3]         57   9e-06
ref|XP_958803.1| polyubiquitin [Neurospora crassa OR74A] gi|3025...    57   9e-06

>ref|XP_003561800.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin-60S ribosomal protein
           L40-like [Brachypodium distachyon]
          Length = 260

 Score = 60.1 bits (144), Expect = 8e-07
 Identities = 41/98 (41%), Positives = 55/98 (56%)
 Frame = -3

Query: 462 QIDAKTLTGRTITIEIGSSETGADIKQKVCDKAGRDSSS*AVINLFDGKQLEDG*VFYQN 283
           QI  KTLTG+TIT+E+ +S+T A++K K+ DK G       +I  F GKQLE+G      
Sbjct: 2   QIFVKTLTGKTITLEVETSDTVANVKAKIQDKEGIPPEQQRLI--FTGKQLEEGDTLADY 59

Query: 282 YVIHSRQYWLARSG*SRLTIWLVLRYR*GGNEIFHRSV 169
            +IH              T+ LVLR R GG +IF RS+
Sbjct: 60  GIIHKES-----------TLHLVLRLR-GGMQIFVRSI 85


>sp|P0CG73.1|UBI1P_CANAL RecName: Full=Polyubiquitin; Contains: RecName:
           Full=Ubiquitin-related; Contains: RecName:
           Full=Ubiquitin; Flags: Precursor
           gi|1143188|gb|AAA84868.1| ubiquitin precursor [Candida
           albicans]
          Length = 229

 Score = 57.0 bits (136), Expect = 7e-06
 Identities = 43/105 (40%), Positives = 58/105 (55%)
 Frame = -3

Query: 483 LQSSGETQIDAKTLTGRTITIEIGSSETGADIKQKVCDKAGRDSSS*AVINLFDGKQLED 304
           L+S G  QI  KTLTG+TIT+E+ SS+T  ++K K+ DK G       +I  F GKQLED
Sbjct: 71  LRSRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI--FAGKQLED 128

Query: 303 G*VFYQNYVIHSRQYWLARSG*SRLTIWLVLRYR*GGNEIFHRSV 169
           G     +Y I               T+ LVLR R GG +IF +++
Sbjct: 129 GRTL-SDYNIQKES-----------TLHLVLRLR-GGMQIFVKTL 160


>ref|XP_004341200.1| polyubiquitin, putative [Acanthamoeba castellanii str. Neff]
           gi|440798058|gb|ELR19129.1| polyubiquitin, putative
           [Acanthamoeba castellanii str. Neff]
          Length = 229

 Score = 56.6 bits (135), Expect = 9e-06
 Identities = 43/105 (40%), Positives = 58/105 (55%)
 Frame = -3

Query: 483 LQSSGETQIDAKTLTGRTITIEIGSSETGADIKQKVCDKAGRDSSS*AVINLFDGKQLED 304
           L+  G  QI  KTLTG+TIT+E+ SS+T  ++KQK+ DK G       +I  F GKQLED
Sbjct: 71  LRLRGGMQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLI--FAGKQLED 128

Query: 303 G*VFYQNYVIHSRQYWLARSG*SRLTIWLVLRYR*GGNEIFHRSV 169
           G     +Y I               T+ LVLR R GG +IF +++
Sbjct: 129 GRTL-ADYNIQKES-----------TLHLVLRLR-GGMQIFVKTL 160


>emb|CAE00783.1| polyubiquitin homolog [Sordaria macrospora]
          Length = 208

 Score = 56.6 bits (135), Expect = 9e-06
 Identities = 43/105 (40%), Positives = 58/105 (55%)
 Frame = -3

Query: 483 LQSSGETQIDAKTLTGRTITIEIGSSETGADIKQKVCDKAGRDSSS*AVINLFDGKQLED 304
           L+  G  QI  KTLTG+TIT+E+ SS+T  ++KQK+ DK G       +I  F GKQLED
Sbjct: 59  LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLI--FAGKQLED 116

Query: 303 G*VFYQNYVIHSRQYWLARSG*SRLTIWLVLRYR*GGNEIFHRSV 169
           G     +Y I               T+ LVLR R GG +IF +++
Sbjct: 117 GRTL-SDYNIQKES-----------TLHLVLRLR-GGMQIFVKTL 148


>ref|XP_003350608.1| hypothetical protein SMAC_07925 [Sordaria macrospora k-hell]
           gi|380089527|emb|CCC12626.1| unnamed protein product
           [Sordaria macrospora k-hell]
          Length = 229

 Score = 56.6 bits (135), Expect = 9e-06
 Identities = 43/105 (40%), Positives = 58/105 (55%)
 Frame = -3

Query: 483 LQSSGETQIDAKTLTGRTITIEIGSSETGADIKQKVCDKAGRDSSS*AVINLFDGKQLED 304
           L+  G  QI  KTLTG+TIT+E+ SS+T  ++KQK+ DK G       +I  F GKQLED
Sbjct: 71  LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLI--FAGKQLED 128

Query: 303 G*VFYQNYVIHSRQYWLARSG*SRLTIWLVLRYR*GGNEIFHRSV 169
           G     +Y I               T+ LVLR R GG +IF +++
Sbjct: 129 GRTL-SDYNIQKES-----------TLHLVLRLR-GGMQIFVKTL 160


>emb|CAA11269.1| polyubiquitin [Nicotiana tabacum]
          Length = 381

 Score = 56.6 bits (135), Expect = 9e-06
 Identities = 43/105 (40%), Positives = 58/105 (55%)
 Frame = -3

Query: 483 LQSSGETQIDAKTLTGRTITIEIGSSETGADIKQKVCDKAGRDSSS*AVINLFDGKQLED 304
           L+  G  QI  KTLTG+TIT+E+ SS+T  ++KQK+ DK G       +I  F GKQLED
Sbjct: 71  LRLRGGMQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLI--FAGKQLED 128

Query: 303 G*VFYQNYVIHSRQYWLARSG*SRLTIWLVLRYR*GGNEIFHRSV 169
           G     +Y I               T+ LVLR R GG +IF +++
Sbjct: 129 GRTL-ADYNIQKES-----------TLHLVLRLR-GGMQIFVKTL 160



 Score = 56.6 bits (135), Expect = 9e-06
 Identities = 43/105 (40%), Positives = 58/105 (55%)
 Frame = -3

Query: 483 LQSSGETQIDAKTLTGRTITIEIGSSETGADIKQKVCDKAGRDSSS*AVINLFDGKQLED 304
           L+  G  QI  KTLTG+TIT+E+ SS+T  ++KQK+ DK G       +I  F GKQLED
Sbjct: 147 LRLRGGMQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLI--FAGKQLED 204

Query: 303 G*VFYQNYVIHSRQYWLARSG*SRLTIWLVLRYR*GGNEIFHRSV 169
           G     +Y I               T+ LVLR R GG +IF +++
Sbjct: 205 GRTL-ADYNIQKES-----------TLHLVLRLR-GGMQIFVKTL 236



 Score = 56.6 bits (135), Expect = 9e-06
 Identities = 43/105 (40%), Positives = 58/105 (55%)
 Frame = -3

Query: 483 LQSSGETQIDAKTLTGRTITIEIGSSETGADIKQKVCDKAGRDSSS*AVINLFDGKQLED 304
           L+  G  QI  KTLTG+TIT+E+ SS+T  ++KQK+ DK G       +I  F GKQLED
Sbjct: 223 LRLRGGMQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLI--FAGKQLED 280

Query: 303 G*VFYQNYVIHSRQYWLARSG*SRLTIWLVLRYR*GGNEIFHRSV 169
           G     +Y I               T+ LVLR R GG +IF +++
Sbjct: 281 GRTL-ADYNIQKES-----------TLHLVLRLR-GGMQIFVKTL 312


>emb|CAA60629.1| unnamed protein product [Acanthamoeba sp. 4b3]
          Length = 172

 Score = 56.6 bits (135), Expect = 9e-06
 Identities = 43/105 (40%), Positives = 58/105 (55%)
 Frame = -3

Query: 483 LQSSGETQIDAKTLTGRTITIEIGSSETGADIKQKVCDKAGRDSSS*AVINLFDGKQLED 304
           L+  G  QI  KTLTG+TIT+E+ SS+T  ++KQK+ DK G       +I  F GKQLED
Sbjct: 71  LRLRGGMQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLI--FAGKQLED 128

Query: 303 G*VFYQNYVIHSRQYWLARSG*SRLTIWLVLRYR*GGNEIFHRSV 169
           G     +Y I               T+ LVLR R GG +IF +++
Sbjct: 129 GRTL-ADYNIQKES-----------TLHLVLRLR-GGMQIFVKTL 160


>ref|XP_958803.1| polyubiquitin [Neurospora crassa OR74A]
           gi|302595953|sp|P0CG70.1|UBI4P_NEUCR RecName:
           Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
           Flags: Precursor gi|295930|emb|CAA31530.1| ubiquitin
           [Neurospora crassa] gi|28920189|gb|EAA29567.1| ubiquitin
           [Neurospora crassa OR74A] gi|336466506|gb|EGO54671.1|
           polyubiquitin [Neurospora tetrasperma FGSC 2508]
           gi|350286609|gb|EGZ67856.1| polyubiquitin [Neurospora
           tetrasperma FGSC 2509]
          Length = 305

 Score = 56.6 bits (135), Expect = 9e-06
 Identities = 43/105 (40%), Positives = 58/105 (55%)
 Frame = -3

Query: 483 LQSSGETQIDAKTLTGRTITIEIGSSETGADIKQKVCDKAGRDSSS*AVINLFDGKQLED 304
           L+  G  QI  KTLTG+TIT+E+ SS+T  ++KQK+ DK G       +I  F GKQLED
Sbjct: 71  LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLI--FAGKQLED 128

Query: 303 G*VFYQNYVIHSRQYWLARSG*SRLTIWLVLRYR*GGNEIFHRSV 169
           G     +Y I               T+ LVLR R GG +IF +++
Sbjct: 129 GRTL-SDYNIQKES-----------TLHLVLRLR-GGMQIFVKTL 160



 Score = 56.6 bits (135), Expect = 9e-06
 Identities = 43/105 (40%), Positives = 58/105 (55%)
 Frame = -3

Query: 483 LQSSGETQIDAKTLTGRTITIEIGSSETGADIKQKVCDKAGRDSSS*AVINLFDGKQLED 304
           L+  G  QI  KTLTG+TIT+E+ SS+T  ++KQK+ DK G       +I  F GKQLED
Sbjct: 147 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLI--FAGKQLED 204

Query: 303 G*VFYQNYVIHSRQYWLARSG*SRLTIWLVLRYR*GGNEIFHRSV 169
           G     +Y I               T+ LVLR R GG +IF +++
Sbjct: 205 GRTL-SDYNIQKES-----------TLHLVLRLR-GGMQIFVKTL 236