BLASTX nr result

ID: Sinomenium21_contig00031643 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00031643
         (426 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77892.1| hypothetical protein VITISV_016272 [Vitis vinifera]    85   9e-15
ref|XP_006849119.1| hypothetical protein AMTR_s00027p00044330 [A...    74   2e-11
ref|XP_006350496.1| PREDICTED: uncharacterized protein LOC102587...    60   2e-07

>emb|CAN77892.1| hypothetical protein VITISV_016272 [Vitis vinifera]
          Length = 206

 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 61/141 (43%), Positives = 71/141 (50%), Gaps = 2/141 (1%)
 Frame = -3

Query: 424 RFLGLLKHPDSVSSPFELEESDVIWSADLSDSSPTVDSGGPNSPAFS--TVXXXXXXXXX 251
           RFL  LK P+S S+P EL+ESDV+WS D         S GPNSP+ S  T          
Sbjct: 11  RFLRQLKQPNSDSNPLELDESDVVWSPD---------SAGPNSPSPSPSTDSSPPSSLXL 61

Query: 250 XXXPDKFGLSAALSQDNRPLLQRKVXXXXXXXXXXXARTITPVPAPRXXXXXXXXXXXXX 71
              P + GLS+ LS D   LL+R+            ARTI PVP PR             
Sbjct: 62  KFQPARLGLSSVLSDDRPTLLRRQSGLDPSFSATSAARTIPPVPIPRSGSSSGDSTGSGS 121

Query: 70  GKLLQSAPVNVPVWPRANGAR 8
           GK L SAPVNVP WP +NG R
Sbjct: 122 GKFLMSAPVNVPAWP-SNGVR 141


>ref|XP_006849119.1| hypothetical protein AMTR_s00027p00044330 [Amborella trichopoda]
           gi|548852606|gb|ERN10700.1| hypothetical protein
           AMTR_s00027p00044330 [Amborella trichopoda]
          Length = 209

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 57/140 (40%), Positives = 70/140 (50%)
 Frame = -3

Query: 424 RFLGLLKHPDSVSSPFELEESDVIWSADLSDSSPTVDSGGPNSPAFSTVXXXXXXXXXXX 245
           RFLG L+ P S S P EL+ES+VIWS D S S  + ++  P S                 
Sbjct: 13  RFLGPLRVPSS-SPPLELDESEVIWSTDYS-SGKSPENSPPTSKPSPETPPSNYHRRHGF 70

Query: 244 XPDKFGLSAALSQDNRPLLQRKVXXXXXXXXXXXARTITPVPAPRXXXXXXXXXXXXXGK 65
            P +FGLSAALS+D+R L+QR+            AR I PVP  +             GK
Sbjct: 71  KPARFGLSAALSEDHRTLVQRQA----GLNPSFAARAIPPVPIRQGSSGSDDLSSAGSGK 126

Query: 64  LLQSAPVNVPVWPRANGARG 5
             QSAPVNVPVW   +G RG
Sbjct: 127 FHQSAPVNVPVW---SGKRG 143


>ref|XP_006350496.1| PREDICTED: uncharacterized protein LOC102587607 [Solanum tuberosum]
          Length = 207

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 51/143 (35%), Positives = 63/143 (44%), Gaps = 3/143 (2%)
 Frame = -3

Query: 424 RFLGLLKHPDSVSSPF---ELEESDVIWSADLSDSSPTVDSGGPNSPAFSTVXXXXXXXX 254
           RF+GLLK PDS  +     E +ESDV WS   S  S  V+S  P +P             
Sbjct: 16  RFMGLLKQPDSNPNNNILDEFDESDVFWSE--SPDSTVVNSFSPPTPT----RHLPQRPP 69

Query: 253 XXXXPDKFGLSAALSQDNRPLLQRKVXXXXXXXXXXXARTITPVPAPRXXXXXXXXXXXX 74
               P   GLSAAL+ D+ PL++RK            A+ I PV                
Sbjct: 70  TLYKPSNSGLSAALTDDHHPLVRRKSTLNPSVSATSAAKMIPPV------FRSENSNPNS 123

Query: 73  XGKLLQSAPVNVPVWPRANGARG 5
             K  QSAPVNVPVW + +G  G
Sbjct: 124 YPKFHQSAPVNVPVWQKKDGPVG 146


Top