BLASTX nr result

ID: Sinomenium21_contig00031298 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00031298
         (348 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307405.1| glycine hydroxymethyltransferase family prot...    58   2e-06
gb|ABO61380.1| serine hydroxymethyltransferase [Populus tremuloi...    58   2e-06
ref|XP_006472687.1| PREDICTED: serine hydroxymethyltransferase 7...    57   2e-06
ref|XP_006434086.1| hypothetical protein CICLE_v10000656mg [Citr...    57   2e-06
ref|XP_006434084.1| hypothetical protein CICLE_v10000656mg [Citr...    57   2e-06

>ref|XP_002307405.1| glycine hydroxymethyltransferase family protein [Populus
           trichocarpa] gi|222856854|gb|EEE94401.1| glycine
           hydroxymethyltransferase family protein [Populus
           trichocarpa]
          Length = 552

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 38/105 (36%), Positives = 48/105 (45%), Gaps = 1/105 (0%)
 Frame = -3

Query: 313 SSWTPLQLLDEDQSATRSSVXXXXXXXXXXXXEGFSFLGHLMCXXXXXXXXXXXXXXXXX 134
           SS  PLQLLD+ Q     +               FS LGH MC                 
Sbjct: 17  SSPIPLQLLDQKQETRIDNEENQTEDEQ------FSILGHQMCIKRPRDNSSQSSASSST 70

Query: 133 XXXXXXR-IEPSVESRRGTVKAWGDQPLCLADPELCNLMEKEKQR 2
                   ++P +ESRR  V+AWG+ PL +ADPE+  +MEKEKQR
Sbjct: 71  TNSSKRVAMDPGLESRRAMVRAWGNHPLPIADPEIHEIMEKEKQR 115


>gb|ABO61380.1| serine hydroxymethyltransferase [Populus tremuloides]
          Length = 552

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 38/105 (36%), Positives = 48/105 (45%), Gaps = 1/105 (0%)
 Frame = -3

Query: 313 SSWTPLQLLDEDQSATRSSVXXXXXXXXXXXXEGFSFLGHLMCXXXXXXXXXXXXXXXXX 134
           SS  PLQLLD+ Q     +               FS LGH MC                 
Sbjct: 17  SSPIPLQLLDQKQETRIDNEENQTEDEQ------FSILGHQMCIKRPRDNSSQSSASSSS 70

Query: 133 XXXXXXR-IEPSVESRRGTVKAWGDQPLCLADPELCNLMEKEKQR 2
                   ++P +ESRR  V+AWG+ PL +ADPE+  +MEKEKQR
Sbjct: 71  TNSSKRVAMDPGLESRRAMVRAWGNHPLPIADPEIHEIMEKEKQR 115


>ref|XP_006472687.1| PREDICTED: serine hydroxymethyltransferase 7-like [Citrus sinensis]
          Length = 593

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 42/115 (36%), Positives = 52/115 (45%), Gaps = 1/115 (0%)
 Frame = -3

Query: 343 HATLPMGSGRSSWTPLQLLDEDQSATRS-SVXXXXXXXXXXXXEGFSFLGHLMCXXXXXX 167
           H+  PM S      PLQLL+E      S +               FS LGH MC      
Sbjct: 47  HSPNPMPS-----KPLQLLEERTEKLHSGNNDERVDKDDEQEEVEFSILGHPMCLKRQRD 101

Query: 166 XXXXXXXXXXXXXXXXXRIEPSVESRRGTVKAWGDQPLCLADPELCNLMEKEKQR 2
                             +EP +ESRR  V+AWG+Q L LADPE+ ++MEKEKQR
Sbjct: 102 CQSLPFTKRFA-------VEPGLESRRAGVRAWGNQSLPLADPEIFDIMEKEKQR 149


>ref|XP_006434086.1| hypothetical protein CICLE_v10000656mg [Citrus clementina]
           gi|557536208|gb|ESR47326.1| hypothetical protein
           CICLE_v10000656mg [Citrus clementina]
          Length = 494

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 42/115 (36%), Positives = 52/115 (45%), Gaps = 1/115 (0%)
 Frame = -3

Query: 343 HATLPMGSGRSSWTPLQLLDEDQSATRS-SVXXXXXXXXXXXXEGFSFLGHLMCXXXXXX 167
           H+  PM S      PLQLL+E      S +               FS LGH MC      
Sbjct: 47  HSPNPMPS-----KPLQLLEERTEKLHSGNNDERVDKDDEQEEVEFSILGHPMCLKRQRD 101

Query: 166 XXXXXXXXXXXXXXXXXRIEPSVESRRGTVKAWGDQPLCLADPELCNLMEKEKQR 2
                             +EP +ESRR  V+AWG+Q L LADPE+ ++MEKEKQR
Sbjct: 102 CQSLPFTKRFA-------VEPGLESRRAGVRAWGNQSLPLADPEIFDIMEKEKQR 149


>ref|XP_006434084.1| hypothetical protein CICLE_v10000656mg [Citrus clementina]
           gi|567883053|ref|XP_006434085.1| hypothetical protein
           CICLE_v10000656mg [Citrus clementina]
           gi|557536206|gb|ESR47324.1| hypothetical protein
           CICLE_v10000656mg [Citrus clementina]
           gi|557536207|gb|ESR47325.1| hypothetical protein
           CICLE_v10000656mg [Citrus clementina]
          Length = 593

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 42/115 (36%), Positives = 52/115 (45%), Gaps = 1/115 (0%)
 Frame = -3

Query: 343 HATLPMGSGRSSWTPLQLLDEDQSATRS-SVXXXXXXXXXXXXEGFSFLGHLMCXXXXXX 167
           H+  PM S      PLQLL+E      S +               FS LGH MC      
Sbjct: 47  HSPNPMPS-----KPLQLLEERTEKLHSGNNDERVDKDDEQEEVEFSILGHPMCLKRQRD 101

Query: 166 XXXXXXXXXXXXXXXXXRIEPSVESRRGTVKAWGDQPLCLADPELCNLMEKEKQR 2
                             +EP +ESRR  V+AWG+Q L LADPE+ ++MEKEKQR
Sbjct: 102 CQSLPFTKRFA-------VEPGLESRRAGVRAWGNQSLPLADPEIFDIMEKEKQR 149


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