BLASTX nr result
ID: Sinomenium21_contig00031209
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00031209
(702 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN66750.1| hypothetical protein VITISV_034413 [Vitis vinifera] 140 5e-31
ref|XP_004161095.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudour... 139 7e-31
ref|XP_004143077.1| PREDICTED: RNA pseudourine synthase 2, chlor... 139 7e-31
ref|XP_003634352.1| PREDICTED: RNA pseudourine synthase 2, chlor... 139 1e-30
ref|XP_006342081.1| PREDICTED: RNA pseudouridine synthase 2, chl... 137 3e-30
ref|XP_004238386.1| PREDICTED: RNA pseudourine synthase 2, chlor... 137 3e-30
ref|XP_006473714.1| PREDICTED: RNA pseudouridine synthase 2, chl... 136 6e-30
ref|XP_003523282.1| PREDICTED: RNA pseudouridine synthase 2, chl... 136 6e-30
ref|XP_007136120.1| hypothetical protein PHAVU_009G019500g [Phas... 135 1e-29
ref|XP_007136119.1| hypothetical protein PHAVU_009G019500g [Phas... 135 1e-29
ref|XP_007017901.1| Pseudouridine synthase family protein isofor... 132 1e-28
ref|XP_007017900.1| Pseudouridine synthase family protein isofor... 132 1e-28
ref|XP_002439034.1| hypothetical protein SORBIDRAFT_10g030300 [S... 132 1e-28
ref|XP_004966473.1| PREDICTED: RNA pseudouridine synthase 2, chl... 131 2e-28
ref|XP_002301949.1| pseudouridine synthase family protein [Popul... 130 4e-28
ref|XP_003563280.1| PREDICTED: RNA pseudourine synthase 2, chlor... 130 6e-28
ref|NP_001058594.1| Os06g0717400 [Oryza sativa Japonica Group] g... 129 9e-28
gb|EEC81320.1| hypothetical protein OsI_24484 [Oryza sativa Indi... 129 9e-28
ref|XP_002887624.1| T4O12.25 [Arabidopsis lyrata subsp. lyrata] ... 129 1e-27
ref|XP_006828851.1| hypothetical protein AMTR_s00001p00157430 [A... 128 2e-27
>emb|CAN66750.1| hypothetical protein VITISV_034413 [Vitis vinifera]
Length = 611
Score = 140 bits (352), Expect = 5e-31
Identities = 66/94 (70%), Positives = 76/94 (80%)
Frame = +3
Query: 3 IRAHAKYLGVPLLGDEVYGGTKSMAMSLLQPKTPASCRANLCQLVSKLQRPCLHALTLGF 182
IRAHAKYLG+PLLGDEVYGGTK+MA+SLL+P+ P+S L QLVS+L RPCLHA+ LGF
Sbjct: 481 IRAHAKYLGIPLLGDEVYGGTKNMALSLLRPRIPSSHHGQLAQLVSRLDRPCLHAVALGF 540
Query: 183 KHPSTGEFLQFSCPPPMDFAEILCLLRSIKTEKR 284
HP TG+ + FSC PP DFAEIL LR I TEKR
Sbjct: 541 NHPKTGKNVHFSCQPPEDFAEILSWLRKISTEKR 574
>ref|XP_004161095.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudourine synthase 2,
chloroplastic-like [Cucumis sativus]
Length = 452
Score = 139 bits (351), Expect = 7e-31
Identities = 65/93 (69%), Positives = 76/93 (81%)
Frame = +3
Query: 3 IRAHAKYLGVPLLGDEVYGGTKSMAMSLLQPKTPASCRANLCQLVSKLQRPCLHALTLGF 182
IRAHAKY+G+PLLGDEVYGGTKSMAMSLL+ + ++C L QLVS L+RPCLHALTLGF
Sbjct: 333 IRAHAKYMGIPLLGDEVYGGTKSMAMSLLRTRASSNCHGQLMQLVSSLERPCLHALTLGF 392
Query: 183 KHPSTGEFLQFSCPPPMDFAEILCLLRSIKTEK 281
HP TG+ ++FSCPPP DF EIL LR I T+K
Sbjct: 393 VHPHTGKNIRFSCPPPTDFTEILSQLREIGTQK 425
>ref|XP_004143077.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like [Cucumis
sativus]
Length = 453
Score = 139 bits (351), Expect = 7e-31
Identities = 65/93 (69%), Positives = 76/93 (81%)
Frame = +3
Query: 3 IRAHAKYLGVPLLGDEVYGGTKSMAMSLLQPKTPASCRANLCQLVSKLQRPCLHALTLGF 182
IRAHAKY+G+PLLGDEVYGGTKSMAMSLL+ + ++C L QLVS L+RPCLHALTLGF
Sbjct: 334 IRAHAKYMGIPLLGDEVYGGTKSMAMSLLRTRASSNCHGQLMQLVSSLERPCLHALTLGF 393
Query: 183 KHPSTGEFLQFSCPPPMDFAEILCLLRSIKTEK 281
HP TG+ ++FSCPPP DF EIL LR I T+K
Sbjct: 394 VHPHTGKNIRFSCPPPTDFTEILSQLREIGTQK 426
>ref|XP_003634352.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like [Vitis
vinifera] gi|302141717|emb|CBI18920.3| unnamed protein
product [Vitis vinifera]
Length = 433
Score = 139 bits (349), Expect = 1e-30
Identities = 65/94 (69%), Positives = 76/94 (80%)
Frame = +3
Query: 3 IRAHAKYLGVPLLGDEVYGGTKSMAMSLLQPKTPASCRANLCQLVSKLQRPCLHALTLGF 182
IRAHAKYLG+PLLGDEVYGGTK+MA+SLL+P+ P+S L QLVS+L RPCLHA+ LGF
Sbjct: 335 IRAHAKYLGIPLLGDEVYGGTKNMALSLLRPRIPSSHHGQLAQLVSRLDRPCLHAVALGF 394
Query: 183 KHPSTGEFLQFSCPPPMDFAEILCLLRSIKTEKR 284
HP TG+ + FSC PP DFAEIL LR I TEK+
Sbjct: 395 NHPKTGKNVHFSCQPPEDFAEILSWLRKISTEKK 428
>ref|XP_006342081.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic-like
[Solanum tuberosum]
Length = 431
Score = 137 bits (346), Expect = 3e-30
Identities = 66/93 (70%), Positives = 76/93 (81%)
Frame = +3
Query: 3 IRAHAKYLGVPLLGDEVYGGTKSMAMSLLQPKTPASCRANLCQLVSKLQRPCLHALTLGF 182
IRAHAKYLG+PL+GDEVYGGTK+MA+SLLQPKTP L QLVS++ RPCLHALTLGF
Sbjct: 337 IRAHAKYLGIPLMGDEVYGGTKNMALSLLQPKTPPMFHGKLSQLVSQIDRPCLHALTLGF 396
Query: 183 KHPSTGEFLQFSCPPPMDFAEILCLLRSIKTEK 281
+HP TGE + F+ PP DFAEIL LR+I TEK
Sbjct: 397 RHPFTGENIHFTRLPPPDFAEILSYLRAINTEK 429
>ref|XP_004238386.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like [Solanum
lycopersicum]
Length = 436
Score = 137 bits (345), Expect = 3e-30
Identities = 67/98 (68%), Positives = 79/98 (80%)
Frame = +3
Query: 3 IRAHAKYLGVPLLGDEVYGGTKSMAMSLLQPKTPASCRANLCQLVSKLQRPCLHALTLGF 182
IRAHAK+LG+PL+GDEVYGGTK+MA+SLLQPKTP L QLVS++ RPCLHALTLGF
Sbjct: 337 IRAHAKHLGIPLMGDEVYGGTKNMALSLLQPKTPPMFHGELSQLVSQIDRPCLHALTLGF 396
Query: 183 KHPSTGEFLQFSCPPPMDFAEILCLLRSIKTEKRSTKN 296
+HP TGE + F+ PP DFAEIL LR+IKTEK + N
Sbjct: 397 RHPFTGENIHFTRLPPPDFAEILSELRAIKTEKVTHPN 434
>ref|XP_006473714.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic-like [Citrus
sinensis]
Length = 421
Score = 136 bits (343), Expect = 6e-30
Identities = 66/96 (68%), Positives = 75/96 (78%)
Frame = +3
Query: 3 IRAHAKYLGVPLLGDEVYGGTKSMAMSLLQPKTPASCRANLCQLVSKLQRPCLHALTLGF 182
IRAHAKY+G+PLLGDEVYGGTK+MA SLLQP+T + +LVS LQRPCLHA+ LGF
Sbjct: 325 IRAHAKYMGIPLLGDEVYGGTKNMAKSLLQPRTAPGSHGKVLKLVSGLQRPCLHAVALGF 384
Query: 183 KHPSTGEFLQFSCPPPMDFAEILCLLRSIKTEKRST 290
HP T E +QFSCPPP DFAEIL LR I TEK S+
Sbjct: 385 THPHTREKIQFSCPPPADFAEILSQLREIGTEKLSS 420
>ref|XP_003523282.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic-like isoform
X1 [Glycine max] gi|571448797|ref|XP_006577958.1|
PREDICTED: RNA pseudouridine synthase 2,
chloroplastic-like isoform X2 [Glycine max]
Length = 450
Score = 136 bits (343), Expect = 6e-30
Identities = 66/102 (64%), Positives = 79/102 (77%)
Frame = +3
Query: 3 IRAHAKYLGVPLLGDEVYGGTKSMAMSLLQPKTPASCRANLCQLVSKLQRPCLHALTLGF 182
IRAHAKYLGVPLLGDE+YGGTKSM +SLL+P+TP S + + ++VS+L RPCLHA TLGF
Sbjct: 349 IRAHAKYLGVPLLGDELYGGTKSMVLSLLRPRTPISLHSKIVKMVSRLDRPCLHAWTLGF 408
Query: 183 KHPSTGEFLQFSCPPPMDFAEILCLLRSIKTEKRSTKNQSGS 308
+HP TGE + FSC PP DFAEIL LR I +E S +S S
Sbjct: 409 QHPHTGEQVHFSCEPPADFAEILSQLRRIGSETVSFTKRSNS 450
>ref|XP_007136120.1| hypothetical protein PHAVU_009G019500g [Phaseolus vulgaris]
gi|561009207|gb|ESW08114.1| hypothetical protein
PHAVU_009G019500g [Phaseolus vulgaris]
Length = 447
Score = 135 bits (341), Expect = 1e-29
Identities = 66/100 (66%), Positives = 76/100 (76%)
Frame = +3
Query: 3 IRAHAKYLGVPLLGDEVYGGTKSMAMSLLQPKTPASCRANLCQLVSKLQRPCLHALTLGF 182
IRAHAKYLGVPLLGDEVYGGTKSM +SLL+P++P S + Q+VS L RPCLHALTLGF
Sbjct: 346 IRAHAKYLGVPLLGDEVYGGTKSMVLSLLRPRSPISLHGKIVQMVSSLDRPCLHALTLGF 405
Query: 183 KHPSTGEFLQFSCPPPMDFAEILCLLRSIKTEKRSTKNQS 302
+HP TGE + FSC PP+DF EIL LR I +E S S
Sbjct: 406 QHPHTGEQVHFSCEPPVDFDEILSQLRRIGSESVSFSKPS 445
>ref|XP_007136119.1| hypothetical protein PHAVU_009G019500g [Phaseolus vulgaris]
gi|561009206|gb|ESW08113.1| hypothetical protein
PHAVU_009G019500g [Phaseolus vulgaris]
Length = 458
Score = 135 bits (341), Expect = 1e-29
Identities = 66/100 (66%), Positives = 76/100 (76%)
Frame = +3
Query: 3 IRAHAKYLGVPLLGDEVYGGTKSMAMSLLQPKTPASCRANLCQLVSKLQRPCLHALTLGF 182
IRAHAKYLGVPLLGDEVYGGTKSM +SLL+P++P S + Q+VS L RPCLHALTLGF
Sbjct: 357 IRAHAKYLGVPLLGDEVYGGTKSMVLSLLRPRSPISLHGKIVQMVSSLDRPCLHALTLGF 416
Query: 183 KHPSTGEFLQFSCPPPMDFAEILCLLRSIKTEKRSTKNQS 302
+HP TGE + FSC PP+DF EIL LR I +E S S
Sbjct: 417 QHPHTGEQVHFSCEPPVDFDEILSQLRRIGSESVSFSKPS 456
>ref|XP_007017901.1| Pseudouridine synthase family protein isoform 2, partial [Theobroma
cacao] gi|508723229|gb|EOY15126.1| Pseudouridine
synthase family protein isoform 2, partial [Theobroma
cacao]
Length = 409
Score = 132 bits (331), Expect = 1e-28
Identities = 64/97 (65%), Positives = 77/97 (79%)
Frame = +3
Query: 3 IRAHAKYLGVPLLGDEVYGGTKSMAMSLLQPKTPASCRANLCQLVSKLQRPCLHALTLGF 182
IRAHAKY+G+PLLGDEVYGGTKSMA+SLL+P+TP + L +LVS+L+RP LHAL LGF
Sbjct: 312 IRAHAKYMGIPLLGDEVYGGTKSMALSLLRPRTPPNYNDQLSRLVSRLERPYLHALVLGF 371
Query: 183 KHPSTGEFLQFSCPPPMDFAEILCLLRSIKTEKRSTK 293
+HP + E + FSC PP DFAEIL LR I TEK + K
Sbjct: 372 EHPHSREMMHFSCQPPPDFAEILSDLRKIGTEKPTFK 408
>ref|XP_007017900.1| Pseudouridine synthase family protein isoform 1 [Theobroma cacao]
gi|508723228|gb|EOY15125.1| Pseudouridine synthase
family protein isoform 1 [Theobroma cacao]
Length = 433
Score = 132 bits (331), Expect = 1e-28
Identities = 64/97 (65%), Positives = 77/97 (79%)
Frame = +3
Query: 3 IRAHAKYLGVPLLGDEVYGGTKSMAMSLLQPKTPASCRANLCQLVSKLQRPCLHALTLGF 182
IRAHAKY+G+PLLGDEVYGGTKSMA+SLL+P+TP + L +LVS+L+RP LHAL LGF
Sbjct: 336 IRAHAKYMGIPLLGDEVYGGTKSMALSLLRPRTPPNYNDQLSRLVSRLERPYLHALVLGF 395
Query: 183 KHPSTGEFLQFSCPPPMDFAEILCLLRSIKTEKRSTK 293
+HP + E + FSC PP DFAEIL LR I TEK + K
Sbjct: 396 EHPHSREMMHFSCQPPPDFAEILSDLRKIGTEKPTFK 432
>ref|XP_002439034.1| hypothetical protein SORBIDRAFT_10g030300 [Sorghum bicolor]
gi|241917257|gb|EER90401.1| hypothetical protein
SORBIDRAFT_10g030300 [Sorghum bicolor]
Length = 441
Score = 132 bits (331), Expect = 1e-28
Identities = 58/89 (65%), Positives = 74/89 (83%)
Frame = +3
Query: 3 IRAHAKYLGVPLLGDEVYGGTKSMAMSLLQPKTPASCRANLCQLVSKLQRPCLHALTLGF 182
IRAHAKY+G+PLLGDE YGGTKSMA+SLL+P+TP+ ++L L+SK+ RPCLHA LGF
Sbjct: 341 IRAHAKYIGIPLLGDETYGGTKSMALSLLRPRTPSKYHSDLSNLISKVDRPCLHAALLGF 400
Query: 183 KHPSTGEFLQFSCPPPMDFAEILCLLRSI 269
KHP +G+ L+FSCPPP DF+E+L LR +
Sbjct: 401 KHPHSGKILEFSCPPPDDFSEVLDELRKV 429
>ref|XP_004966473.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic-like
[Setaria italica]
Length = 437
Score = 131 bits (330), Expect = 2e-28
Identities = 59/89 (66%), Positives = 72/89 (80%)
Frame = +3
Query: 3 IRAHAKYLGVPLLGDEVYGGTKSMAMSLLQPKTPASCRANLCQLVSKLQRPCLHALTLGF 182
IRAHAKYLG+PLLGDE YGGTKSMA+SLL+P+TP+ + L L+SK+ RPCLHA LGF
Sbjct: 336 IRAHAKYLGIPLLGDETYGGTKSMALSLLRPRTPSKYHSGLSDLISKVDRPCLHAALLGF 395
Query: 183 KHPSTGEFLQFSCPPPMDFAEILCLLRSI 269
KHP +G+ L+FSCPPP DF E+L LR +
Sbjct: 396 KHPHSGKILEFSCPPPDDFTEVLDELRRV 424
>ref|XP_002301949.1| pseudouridine synthase family protein [Populus trichocarpa]
gi|222843675|gb|EEE81222.1| pseudouridine synthase
family protein [Populus trichocarpa]
Length = 444
Score = 130 bits (327), Expect = 4e-28
Identities = 62/97 (63%), Positives = 74/97 (76%)
Frame = +3
Query: 3 IRAHAKYLGVPLLGDEVYGGTKSMAMSLLQPKTPASCRANLCQLVSKLQRPCLHALTLGF 182
IRAHAKY+G+PLLGDEVYGGT++MA+SLL+ +T SC L +S L+RPCLHAL LGF
Sbjct: 347 IRAHAKYIGIPLLGDEVYGGTQNMALSLLRSRTQPSCHRQLSLSLSGLERPCLHALALGF 406
Query: 183 KHPSTGEFLQFSCPPPMDFAEILCLLRSIKTEKRSTK 293
HP TG+ + FSCPPP DF EIL LR + TEK S K
Sbjct: 407 THPCTGKEIHFSCPPPPDFTEILSQLREMGTEKLSFK 443
>ref|XP_003563280.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like
[Brachypodium distachyon]
Length = 439
Score = 130 bits (326), Expect = 6e-28
Identities = 59/89 (66%), Positives = 72/89 (80%)
Frame = +3
Query: 3 IRAHAKYLGVPLLGDEVYGGTKSMAMSLLQPKTPASCRANLCQLVSKLQRPCLHALTLGF 182
IRAHAKYLG PLLGDE YGG+KSMA+SLL+P+TP+ +L L+SK+ RPCLHA LGF
Sbjct: 335 IRAHAKYLGYPLLGDETYGGSKSMALSLLRPRTPSRYHGDLSNLISKIDRPCLHAALLGF 394
Query: 183 KHPSTGEFLQFSCPPPMDFAEILCLLRSI 269
KHP +G+ L+FSCPPP DFAE+L LR +
Sbjct: 395 KHPHSGKMLEFSCPPPDDFAEVLDELRRV 423
>ref|NP_001058594.1| Os06g0717400 [Oryza sativa Japonica Group]
gi|75252835|sp|Q5Z8P2.1|PUS2_ORYSJ RecName: Full=RNA
pseudouridine synthase 2, chloroplastic; AltName:
Full=RNA pseudouridylate synthase 2; AltName:
Full=RNA-uridine isomerase 2; Flags: Precursor
gi|53791796|dbj|BAD53590.1| ribosomal large subunit
pseudouridine synthase-like [Oryza sativa Japonica
Group] gi|54291043|dbj|BAD61720.1| ribosomal large
subunit pseudouridine synthase-like [Oryza sativa
Japonica Group] gi|113596634|dbj|BAF20508.1|
Os06g0717400 [Oryza sativa Japonica Group]
gi|215706335|dbj|BAG93191.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|222636236|gb|EEE66368.1| hypothetical protein
OsJ_22675 [Oryza sativa Japonica Group]
Length = 445
Score = 129 bits (324), Expect = 9e-28
Identities = 57/89 (64%), Positives = 71/89 (79%)
Frame = +3
Query: 3 IRAHAKYLGVPLLGDEVYGGTKSMAMSLLQPKTPASCRANLCQLVSKLQRPCLHALTLGF 182
IRAHAKYLG+PLLGDE YGGTKSMA+SLL+P+TP+ +L ++SK+ RPCLHA LGF
Sbjct: 340 IRAHAKYLGIPLLGDETYGGTKSMALSLLRPRTPSRYHCDLSNMISKIDRPCLHAALLGF 399
Query: 183 KHPSTGEFLQFSCPPPMDFAEILCLLRSI 269
KHP +G+ L+FSCPPP DF E+L L +
Sbjct: 400 KHPHSGKILEFSCPPPDDFTEVLNELHQV 428
>gb|EEC81320.1| hypothetical protein OsI_24484 [Oryza sativa Indica Group]
Length = 445
Score = 129 bits (324), Expect = 9e-28
Identities = 57/89 (64%), Positives = 71/89 (79%)
Frame = +3
Query: 3 IRAHAKYLGVPLLGDEVYGGTKSMAMSLLQPKTPASCRANLCQLVSKLQRPCLHALTLGF 182
IRAHAKYLG+PLLGDE YGGTKSMA+SLL+P+TP+ +L ++SK+ RPCLHA LGF
Sbjct: 340 IRAHAKYLGIPLLGDETYGGTKSMALSLLRPRTPSRYHCDLSNMISKIDRPCLHAALLGF 399
Query: 183 KHPSTGEFLQFSCPPPMDFAEILCLLRSI 269
KHP +G+ L+FSCPPP DF E+L L +
Sbjct: 400 KHPHSGKILEFSCPPPDDFTEVLNELHQV 428
>ref|XP_002887624.1| T4O12.25 [Arabidopsis lyrata subsp. lyrata]
gi|297333465|gb|EFH63883.1| T4O12.25 [Arabidopsis lyrata
subsp. lyrata]
Length = 930
Score = 129 bits (323), Expect = 1e-27
Identities = 60/93 (64%), Positives = 73/93 (78%)
Frame = +3
Query: 3 IRAHAKYLGVPLLGDEVYGGTKSMAMSLLQPKTPASCRANLCQLVSKLQRPCLHALTLGF 182
IRAHAKY+GVPLLGDEVYGGTKSMA+SLLQ + S + + +L+S++ RPCLHA+ LGF
Sbjct: 829 IRAHAKYMGVPLLGDEVYGGTKSMALSLLQKRVSRSDQEEIVELISRMDRPCLHAIVLGF 888
Query: 183 KHPSTGEFLQFSCPPPMDFAEILCLLRSIKTEK 281
HP TGE ++FSCPPP D AEI+ LLR EK
Sbjct: 889 THPCTGEIVKFSCPPPSDLAEIVGLLRRSGLEK 921
>ref|XP_006828851.1| hypothetical protein AMTR_s00001p00157430 [Amborella trichopoda]
gi|548833830|gb|ERM96267.1| hypothetical protein
AMTR_s00001p00157430 [Amborella trichopoda]
Length = 452
Score = 128 bits (322), Expect = 2e-27
Identities = 64/101 (63%), Positives = 76/101 (75%)
Frame = +3
Query: 3 IRAHAKYLGVPLLGDEVYGGTKSMAMSLLQPKTPASCRANLCQLVSKLQRPCLHALTLGF 182
IR HAKY+G PLLGDEVYGGTKSMA+S L+P+TP+ L QLVS LQRPCLHA +LGF
Sbjct: 343 IRVHAKYIGNPLLGDEVYGGTKSMALSRLRPRTPSHYHGPLSQLVSNLQRPCLHAFSLGF 402
Query: 183 KHPSTGEFLQFSCPPPMDFAEILCLLRSIKTEKRSTKNQSG 305
KHP + E + F+CPPP DFAE+L L+SI RS+ N G
Sbjct: 403 KHPHSKENVLFTCPPPPDFAEVLRQLQSI----RSSNNHGG 439