BLASTX nr result

ID: Sinomenium21_contig00031185 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00031185
         (351 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007042354.1| RNA-binding protein, putative isoform 1 [The...    57   2e-06
ref|XP_007042355.1| RNA-binding protein, putative isoform 2 [The...    57   3e-06
ref|XP_007200048.1| hypothetical protein PRUPE_ppa024894mg [Prun...    57   3e-06
ref|XP_006480245.1| PREDICTED: la-related protein 7-like [Citrus...    56   4e-06
ref|XP_006423072.1| hypothetical protein CICLE_v10028506mg [Citr...    56   4e-06
ref|XP_002521842.1| lupus la ribonucleoprotein, putative [Ricinu...    56   6e-06
ref|XP_002281817.1| PREDICTED: uncharacterized protein LOC100241...    55   8e-06
emb|CAN81423.1| hypothetical protein VITISV_035943 [Vitis vinifera]    55   8e-06
ref|XP_004292453.1| PREDICTED: uncharacterized protein LOC101311...    55   1e-05

>ref|XP_007042354.1| RNA-binding protein, putative isoform 1 [Theobroma cacao]
           gi|508706289|gb|EOX98185.1| RNA-binding protein,
           putative isoform 1 [Theobroma cacao]
          Length = 440

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 29/53 (54%), Positives = 36/53 (67%)
 Frame = -2

Query: 254 IQLEAVAKQTPRGPRMPDGTRGFTMGRGKPLTV*SYYPGPSGNLVLSCLLLRN 96
           +Q EA  KQT +GPRMPDGTRGFTMGRGKP++    +    G +  S L LR+
Sbjct: 386 VQCEASVKQTSKGPRMPDGTRGFTMGRGKPISSALEHTSFLGYVEYSVLNLRS 438


>ref|XP_007042355.1| RNA-binding protein, putative isoform 2 [Theobroma cacao]
           gi|508706290|gb|EOX98186.1| RNA-binding protein,
           putative isoform 2 [Theobroma cacao]
          Length = 422

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 24/32 (75%), Positives = 28/32 (87%)
 Frame = -2

Query: 254 IQLEAVAKQTPRGPRMPDGTRGFTMGRGKPLT 159
           +Q EA  KQT +GPRMPDGTRGFTMGRGKP++
Sbjct: 387 VQCEASVKQTSKGPRMPDGTRGFTMGRGKPIS 418


>ref|XP_007200048.1| hypothetical protein PRUPE_ppa024894mg [Prunus persica]
           gi|462395448|gb|EMJ01247.1| hypothetical protein
           PRUPE_ppa024894mg [Prunus persica]
          Length = 401

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 25/32 (78%), Positives = 28/32 (87%)
 Frame = -2

Query: 254 IQLEAVAKQTPRGPRMPDGTRGFTMGRGKPLT 159
           IQ EA AKQ  +GPRMPDGTRGFTMGRGKP++
Sbjct: 365 IQCEAPAKQNAKGPRMPDGTRGFTMGRGKPVS 396


>ref|XP_006480245.1| PREDICTED: la-related protein 7-like [Citrus sinensis]
          Length = 424

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 26/31 (83%), Positives = 28/31 (90%)
 Frame = -2

Query: 251 QLEAVAKQTPRGPRMPDGTRGFTMGRGKPLT 159
           Q EA AKQT +GPRMPDGTRGFTMGRGKPL+
Sbjct: 386 QNEASAKQTFKGPRMPDGTRGFTMGRGKPLS 416


>ref|XP_006423072.1| hypothetical protein CICLE_v10028506mg [Citrus clementina]
           gi|557525006|gb|ESR36312.1| hypothetical protein
           CICLE_v10028506mg [Citrus clementina]
          Length = 424

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 26/31 (83%), Positives = 28/31 (90%)
 Frame = -2

Query: 251 QLEAVAKQTPRGPRMPDGTRGFTMGRGKPLT 159
           Q EA AKQT +GPRMPDGTRGFTMGRGKPL+
Sbjct: 386 QNEASAKQTFKGPRMPDGTRGFTMGRGKPLS 416


>ref|XP_002521842.1| lupus la ribonucleoprotein, putative [Ricinus communis]
           gi|223538880|gb|EEF40478.1| lupus la ribonucleoprotein,
           putative [Ricinus communis]
          Length = 440

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 25/30 (83%), Positives = 26/30 (86%)
 Frame = -2

Query: 251 QLEAVAKQTPRGPRMPDGTRGFTMGRGKPL 162
           Q EA AK T +GPRMPDGTRGFTMGRGKPL
Sbjct: 400 QCEASAKHTSKGPRMPDGTRGFTMGRGKPL 429


>ref|XP_002281817.1| PREDICTED: uncharacterized protein LOC100241743 [Vitis vinifera]
           gi|297741333|emb|CBI32464.3| unnamed protein product
           [Vitis vinifera]
          Length = 412

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 24/31 (77%), Positives = 27/31 (87%)
 Frame = -2

Query: 251 QLEAVAKQTPRGPRMPDGTRGFTMGRGKPLT 159
           Q EA AKQ  +GPRMPDGTRGFTMGRGKP++
Sbjct: 372 QFEASAKQITKGPRMPDGTRGFTMGRGKPIS 402


>emb|CAN81423.1| hypothetical protein VITISV_035943 [Vitis vinifera]
          Length = 941

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 24/31 (77%), Positives = 27/31 (87%)
 Frame = -2

Query: 251 QLEAVAKQTPRGPRMPDGTRGFTMGRGKPLT 159
           Q EA AKQ  +GPRMPDGTRGFTMGRGKP++
Sbjct: 356 QFEASAKQITKGPRMPDGTRGFTMGRGKPIS 386


>ref|XP_004292453.1| PREDICTED: uncharacterized protein LOC101311941 [Fragaria vesca
           subsp. vesca]
          Length = 401

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 25/31 (80%), Positives = 26/31 (83%)
 Frame = -2

Query: 254 IQLEAVAKQTPRGPRMPDGTRGFTMGRGKPL 162
           IQ EA AK   +GPRMPDGTRGFTMGRGKPL
Sbjct: 365 IQCEASAKPNTKGPRMPDGTRGFTMGRGKPL 395


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