BLASTX nr result
ID: Sinomenium21_contig00031140
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00031140
(313 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002282635.1| PREDICTED: putative exosome complex componen... 89 6e-16
ref|XP_006476772.1| PREDICTED: putative exosome complex componen... 88 1e-15
ref|XP_006439811.1| hypothetical protein CICLE_v10021986mg [Citr... 88 1e-15
ref|XP_006827742.1| hypothetical protein AMTR_s00009p00262150 [A... 87 2e-15
ref|XP_002321594.1| hypothetical protein POPTR_0015s08670g, part... 86 4e-15
ref|XP_004491574.1| PREDICTED: putative exosome complex componen... 85 1e-14
ref|XP_004969374.1| PREDICTED: putative exosome complex componen... 84 3e-14
ref|XP_002318044.1| exonuclease-related family protein [Populus ... 84 3e-14
ref|XP_002869291.1| hypothetical protein ARALYDRAFT_491516 [Arab... 83 3e-14
ref|XP_006572879.1| PREDICTED: uncharacterized protein LOC100809... 83 4e-14
ref|XP_003613959.1| Exosome complex exonuclease RRP40 [Medicago ... 82 8e-14
ref|NP_680755.2| PNAS-3 related protein [Arabidopsis thaliana] g... 82 1e-13
dbj|BAD93872.1| hypothetical protein [Arabidopsis thaliana] 82 1e-13
ref|XP_007157704.1| hypothetical protein PHAVU_002G091200g [Phas... 81 1e-13
ref|XP_006412506.1| hypothetical protein EUTSA_v10026115mg [Eutr... 81 1e-13
ref|XP_004138110.1| PREDICTED: putative exosome complex componen... 81 1e-13
tpg|DAA58257.1| TPA: exosome complex exonuclease RRP40 [Zea mays] 80 3e-13
tpg|DAA58255.1| TPA: hypothetical protein ZEAMMB73_922165 [Zea m... 80 3e-13
ref|XP_003518749.1| PREDICTED: putative exosome complex componen... 80 3e-13
ref|XP_002456088.1| hypothetical protein SORBIDRAFT_03g030230 [S... 80 3e-13
>ref|XP_002282635.1| PREDICTED: putative exosome complex component rrp40 [Vitis
vinifera] gi|297733775|emb|CBI15022.3| unnamed protein
product [Vitis vinifera]
Length = 237
Score = 89.0 bits (219), Expect = 6e-16
Identities = 45/55 (81%), Positives = 49/55 (89%)
Frame = -1
Query: 313 KKLSFEIAVGLNGRVWVNADAPSTVILVTNAIKASESLSATQQRIMVEKLIQRIQ 149
KKLSFEIAVGLNGRVWVNA +PSTVILV NAI SESLS QQ+IMV+KL+QRIQ
Sbjct: 183 KKLSFEIAVGLNGRVWVNASSPSTVILVANAIMNSESLSVVQQKIMVDKLLQRIQ 237
>ref|XP_006476772.1| PREDICTED: putative exosome complex component rrp40-like isoform X1
[Citrus sinensis] gi|568845839|ref|XP_006476773.1|
PREDICTED: putative exosome complex component rrp40-like
isoform X2 [Citrus sinensis]
Length = 238
Score = 88.2 bits (217), Expect = 1e-15
Identities = 43/55 (78%), Positives = 52/55 (94%)
Frame = -1
Query: 313 KKLSFEIAVGLNGRVWVNADAPSTVILVTNAIKASESLSATQQRIMVEKLIQRIQ 149
K+LSFEIAVGLNGRVWVNA++PSTV+LV+NAI SESLSA QQ+IMV+KL+QRI+
Sbjct: 184 KQLSFEIAVGLNGRVWVNAESPSTVVLVSNAIMNSESLSAVQQKIMVDKLLQRIK 238
>ref|XP_006439811.1| hypothetical protein CICLE_v10021986mg [Citrus clementina]
gi|567894648|ref|XP_006439812.1| hypothetical protein
CICLE_v10021986mg [Citrus clementina]
gi|557542073|gb|ESR53051.1| hypothetical protein
CICLE_v10021986mg [Citrus clementina]
gi|557542074|gb|ESR53052.1| hypothetical protein
CICLE_v10021986mg [Citrus clementina]
Length = 238
Score = 88.2 bits (217), Expect = 1e-15
Identities = 43/55 (78%), Positives = 52/55 (94%)
Frame = -1
Query: 313 KKLSFEIAVGLNGRVWVNADAPSTVILVTNAIKASESLSATQQRIMVEKLIQRIQ 149
K+LSFEIAVGLNGRVWVNA++PSTV+LV+NAI SESLSA QQ+IMV+KL+QRI+
Sbjct: 184 KQLSFEIAVGLNGRVWVNAESPSTVVLVSNAIMNSESLSAVQQKIMVDKLLQRIK 238
>ref|XP_006827742.1| hypothetical protein AMTR_s00009p00262150 [Amborella trichopoda]
gi|548832362|gb|ERM95158.1| hypothetical protein
AMTR_s00009p00262150 [Amborella trichopoda]
Length = 240
Score = 87.4 bits (215), Expect = 2e-15
Identities = 43/55 (78%), Positives = 49/55 (89%)
Frame = -1
Query: 313 KKLSFEIAVGLNGRVWVNADAPSTVILVTNAIKASESLSATQQRIMVEKLIQRIQ 149
KKLSFEIAVGLNGRVWVNA +PSTVILV NAI ++E LS QQRI+VEKL+QR+Q
Sbjct: 186 KKLSFEIAVGLNGRVWVNASSPSTVILVANAIMSAEFLSGAQQRILVEKLLQRVQ 240
>ref|XP_002321594.1| hypothetical protein POPTR_0015s08670g, partial [Populus
trichocarpa] gi|222868590|gb|EEF05721.1| hypothetical
protein POPTR_0015s08670g, partial [Populus trichocarpa]
Length = 79
Score = 86.3 bits (212), Expect = 4e-15
Identities = 43/55 (78%), Positives = 48/55 (87%)
Frame = -1
Query: 313 KKLSFEIAVGLNGRVWVNADAPSTVILVTNAIKASESLSATQQRIMVEKLIQRIQ 149
KKLSFEIAVGLNGRVWV AD+PSTVI+V NAI SESLS QQ+IM EKL+Q+IQ
Sbjct: 25 KKLSFEIAVGLNGRVWVKADSPSTVIIVVNAIIKSESLSGAQQKIMAEKLLQKIQ 79
>ref|XP_004491574.1| PREDICTED: putative exosome complex component rrp40-like [Cicer
arietinum]
Length = 104
Score = 84.7 bits (208), Expect = 1e-14
Identities = 41/55 (74%), Positives = 47/55 (85%)
Frame = -1
Query: 313 KKLSFEIAVGLNGRVWVNADAPSTVILVTNAIKASESLSATQQRIMVEKLIQRIQ 149
KKLSFEIAVGLNGRVWVNA +PST I+V NAI SE+LS QQ+IM EKL+QR+Q
Sbjct: 50 KKLSFEIAVGLNGRVWVNASSPSTTIIVANAIMNSETLSGVQQKIMAEKLLQRVQ 104
>ref|XP_004969374.1| PREDICTED: putative exosome complex component rrp40-like [Setaria
italica]
Length = 239
Score = 83.6 bits (205), Expect = 3e-14
Identities = 42/54 (77%), Positives = 47/54 (87%)
Frame = -1
Query: 313 KKLSFEIAVGLNGRVWVNADAPSTVILVTNAIKASESLSATQQRIMVEKLIQRI 152
KKLSFEIAVGLNGRVWVNA AP+TVILV+NAI SESLS QQR MVE L++R+
Sbjct: 185 KKLSFEIAVGLNGRVWVNAPAPNTVILVSNAIMRSESLSGIQQRAMVENLLERL 238
>ref|XP_002318044.1| exonuclease-related family protein [Populus trichocarpa]
gi|118482713|gb|ABK93275.1| unknown [Populus
trichocarpa] gi|222858717|gb|EEE96264.1|
exonuclease-related family protein [Populus trichocarpa]
Length = 242
Score = 83.6 bits (205), Expect = 3e-14
Identities = 41/55 (74%), Positives = 48/55 (87%)
Frame = -1
Query: 313 KKLSFEIAVGLNGRVWVNADAPSTVILVTNAIKASESLSATQQRIMVEKLIQRIQ 149
KKLSFEIAVGLNGRVWVNA++PS VI+V NAI SE+LS QQ+IM EKL+Q+IQ
Sbjct: 186 KKLSFEIAVGLNGRVWVNANSPSIVIIVANAIMNSETLSGVQQKIMAEKLLQKIQ 240
>ref|XP_002869291.1| hypothetical protein ARALYDRAFT_491516 [Arabidopsis lyrata subsp.
lyrata] gi|297315127|gb|EFH45550.1| hypothetical protein
ARALYDRAFT_491516 [Arabidopsis lyrata subsp. lyrata]
Length = 241
Score = 83.2 bits (204), Expect = 3e-14
Identities = 42/54 (77%), Positives = 47/54 (87%)
Frame = -1
Query: 313 KKLSFEIAVGLNGRVWVNADAPSTVILVTNAIKASESLSATQQRIMVEKLIQRI 152
KKLSFEIAVGLNGRVWVN+ AP TVI+V NA+ SESLS TQQRIMVEKL+ +I
Sbjct: 186 KKLSFEIAVGLNGRVWVNSAAPRTVIIVANAMMNSESLSVTQQRIMVEKLLAKI 239
>ref|XP_006572879.1| PREDICTED: uncharacterized protein LOC100809941 isoform X1 [Glycine
max] gi|571433381|ref|XP_006572880.1| PREDICTED:
uncharacterized protein LOC100809941 isoform X2 [Glycine
max] gi|571433383|ref|XP_006572881.1| PREDICTED:
uncharacterized protein LOC100809941 isoform X3 [Glycine
max] gi|571433385|ref|XP_006572882.1| PREDICTED:
uncharacterized protein LOC100809941 isoform X4 [Glycine
max]
Length = 240
Score = 82.8 bits (203), Expect = 4e-14
Identities = 42/55 (76%), Positives = 47/55 (85%)
Frame = -1
Query: 313 KKLSFEIAVGLNGRVWVNADAPSTVILVTNAIKASESLSATQQRIMVEKLIQRIQ 149
KKLSFEIAVGLNGRVWV+A +P T I+V NAI SE+LS QQRIMVEKL+QRIQ
Sbjct: 186 KKLSFEIAVGLNGRVWVDAASPHTTIVVANAIMNSETLSGAQQRIMVEKLLQRIQ 240
>ref|XP_003613959.1| Exosome complex exonuclease RRP40 [Medicago truncatula]
gi|217074508|gb|ACJ85614.1| unknown [Medicago
truncatula] gi|355515294|gb|AES96917.1| Exosome complex
exonuclease RRP40 [Medicago truncatula]
gi|388510130|gb|AFK43131.1| unknown [Medicago
truncatula]
Length = 240
Score = 82.0 bits (201), Expect = 8e-14
Identities = 40/55 (72%), Positives = 46/55 (83%)
Frame = -1
Query: 313 KKLSFEIAVGLNGRVWVNADAPSTVILVTNAIKASESLSATQQRIMVEKLIQRIQ 149
KKLSFEIAVGLNGRVWVNA +PST I+V NA+ SE LS QQ+IM EKL+QR+Q
Sbjct: 186 KKLSFEIAVGLNGRVWVNASSPSTTIIVANALINSEVLSGVQQKIMAEKLLQRVQ 240
>ref|NP_680755.2| PNAS-3 related protein [Arabidopsis thaliana]
gi|63147368|gb|AAY34157.1| At4g32175 [Arabidopsis
thaliana] gi|111074296|gb|ABH04521.1| At4g32175
[Arabidopsis thaliana] gi|332660614|gb|AEE86014.1|
PNAS-3 related protein [Arabidopsis thaliana]
Length = 241
Score = 81.6 bits (200), Expect = 1e-13
Identities = 42/51 (82%), Positives = 44/51 (86%)
Frame = -1
Query: 313 KKLSFEIAVGLNGRVWVNADAPSTVILVTNAIKASESLSATQQRIMVEKLI 161
KKLSFEIAVGLNGRVWVNA AP VI+V NAI SESLS TQQRIMVEKL+
Sbjct: 186 KKLSFEIAVGLNGRVWVNATAPRIVIIVANAIMNSESLSGTQQRIMVEKLL 236
>dbj|BAD93872.1| hypothetical protein [Arabidopsis thaliana]
Length = 241
Score = 81.6 bits (200), Expect = 1e-13
Identities = 42/51 (82%), Positives = 44/51 (86%)
Frame = -1
Query: 313 KKLSFEIAVGLNGRVWVNADAPSTVILVTNAIKASESLSATQQRIMVEKLI 161
KKLSFEIAVGLNGRVWVNA AP VI+V NAI SESLS TQQRIMVEKL+
Sbjct: 186 KKLSFEIAVGLNGRVWVNATAPRIVIIVANAIMNSESLSGTQQRIMVEKLL 236
>ref|XP_007157704.1| hypothetical protein PHAVU_002G091200g [Phaseolus vulgaris]
gi|561031119|gb|ESW29698.1| hypothetical protein
PHAVU_002G091200g [Phaseolus vulgaris]
Length = 240
Score = 81.3 bits (199), Expect = 1e-13
Identities = 41/55 (74%), Positives = 46/55 (83%)
Frame = -1
Query: 313 KKLSFEIAVGLNGRVWVNADAPSTVILVTNAIKASESLSATQQRIMVEKLIQRIQ 149
KK+SFEIAVGLNGRVWVNA +P T I V NAI SE+LS QQRIMVEKL++RIQ
Sbjct: 186 KKISFEIAVGLNGRVWVNAASPQTTITVANAIMNSETLSDAQQRIMVEKLLKRIQ 240
>ref|XP_006412506.1| hypothetical protein EUTSA_v10026115mg [Eutrema salsugineum]
gi|557113676|gb|ESQ53959.1| hypothetical protein
EUTSA_v10026115mg [Eutrema salsugineum]
Length = 240
Score = 81.3 bits (199), Expect = 1e-13
Identities = 40/54 (74%), Positives = 46/54 (85%)
Frame = -1
Query: 313 KKLSFEIAVGLNGRVWVNADAPSTVILVTNAIKASESLSATQQRIMVEKLIQRI 152
KKL FEIA+G+NGRVWVNA AP +VI+V NAI SESLS TQQRIMVEKL+ +I
Sbjct: 185 KKLCFEIAIGINGRVWVNATAPRSVIIVANAIMNSESLSGTQQRIMVEKLLAKI 238
>ref|XP_004138110.1| PREDICTED: putative exosome complex component rrp40-like [Cucumis
sativus] gi|449477413|ref|XP_004155016.1| PREDICTED:
putative exosome complex component rrp40-like [Cucumis
sativus]
Length = 243
Score = 81.3 bits (199), Expect = 1e-13
Identities = 39/55 (70%), Positives = 48/55 (87%)
Frame = -1
Query: 313 KKLSFEIAVGLNGRVWVNADAPSTVILVTNAIKASESLSATQQRIMVEKLIQRIQ 149
KKLSFE AVGLNGRVWVNAD+PST+I+V+NAI SE+LS QQRIMV+KL+ ++
Sbjct: 186 KKLSFETAVGLNGRVWVNADSPSTIIVVSNAILNSETLSGVQQRIMVDKLLANLK 240
>tpg|DAA58257.1| TPA: exosome complex exonuclease RRP40 [Zea mays]
Length = 239
Score = 80.1 bits (196), Expect = 3e-13
Identities = 41/54 (75%), Positives = 46/54 (85%)
Frame = -1
Query: 313 KKLSFEIAVGLNGRVWVNADAPSTVILVTNAIKASESLSATQQRIMVEKLIQRI 152
KKLSFEIAVGLNGRVWVNA A STVILV+NAI SESLS +QR MVE L++R+
Sbjct: 185 KKLSFEIAVGLNGRVWVNAPAASTVILVSNAIMRSESLSGIKQRAMVENLLERL 238
>tpg|DAA58255.1| TPA: hypothetical protein ZEAMMB73_922165 [Zea mays]
Length = 80
Score = 80.1 bits (196), Expect = 3e-13
Identities = 41/54 (75%), Positives = 46/54 (85%)
Frame = -1
Query: 313 KKLSFEIAVGLNGRVWVNADAPSTVILVTNAIKASESLSATQQRIMVEKLIQRI 152
KKLSFEIAVGLNGRVWVNA A STVILV+NAI SESLS +QR MVE L++R+
Sbjct: 26 KKLSFEIAVGLNGRVWVNAPAASTVILVSNAIMRSESLSGIKQRAMVENLLERL 79
>ref|XP_003518749.1| PREDICTED: putative exosome complex component rrp40-like isoform X1
[Glycine max] gi|571439680|ref|XP_006574927.1|
PREDICTED: putative exosome complex component rrp40-like
isoform X2 [Glycine max]
Length = 240
Score = 80.1 bits (196), Expect = 3e-13
Identities = 40/54 (74%), Positives = 46/54 (85%)
Frame = -1
Query: 313 KKLSFEIAVGLNGRVWVNADAPSTVILVTNAIKASESLSATQQRIMVEKLIQRI 152
KKLSFEIAVGLNGRVWV+A +P T I+V NAI SE+LS QQRIMVEKL++RI
Sbjct: 186 KKLSFEIAVGLNGRVWVSAASPQTTIVVANAIMNSETLSGAQQRIMVEKLLERI 239
>ref|XP_002456088.1| hypothetical protein SORBIDRAFT_03g030230 [Sorghum bicolor]
gi|241928063|gb|EES01208.1| hypothetical protein
SORBIDRAFT_03g030230 [Sorghum bicolor]
Length = 239
Score = 80.1 bits (196), Expect = 3e-13
Identities = 41/54 (75%), Positives = 46/54 (85%)
Frame = -1
Query: 313 KKLSFEIAVGLNGRVWVNADAPSTVILVTNAIKASESLSATQQRIMVEKLIQRI 152
KKLSFEIAVGLNGRVWVNA A STVILV+NAI SESLS +QR MVE L++R+
Sbjct: 185 KKLSFEIAVGLNGRVWVNAPAASTVILVSNAIMRSESLSGIKQRAMVENLLERL 238