BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00031121
         (1615 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004304947.1| PREDICTED: pentatricopeptide repeat-containi...   394   e-107
ref|XP_007216409.1| hypothetical protein PRUPE_ppa022709mg, part...   389   e-105
emb|CBI35029.3| unnamed protein product [Vitis vinifera]              389   e-105
ref|XP_002276684.1| PREDICTED: putative pentatricopeptide repeat...   389   e-105
ref|XP_002517451.1| pentatricopeptide repeat-containing protein,...   371   e-100
ref|XP_006290938.1| hypothetical protein CARUB_v10017051mg [Caps...   360   1e-96
ref|NP_189505.2| putative pentatricopeptide repeat-containing pr...   360   1e-96
gb|EXB36666.1| hypothetical protein L484_002079 [Morus notabilis]     359   2e-96
ref|XP_002877120.1| pentatricopeptide repeat-containing protein ...   358   3e-96
ref|NP_189507.2| pentatricopeptide repeat-containing protein [Ar...   356   2e-95
ref|XP_007032423.1| Tetratricopeptide repeat (TPR)-like superfam...   355   2e-95
ref|XP_006338488.1| PREDICTED: putative pentatricopeptide repeat...   344   7e-92
ref|XP_006395353.1| hypothetical protein EUTSA_v10005682mg [Eutr...   343   1e-91
ref|XP_004233685.1| PREDICTED: putative pentatricopeptide repeat...   338   5e-90
ref|NP_001168258.1| hypothetical protein [Zea mays] gi|223947079...   324   8e-86
ref|XP_003559455.1| PREDICTED: putative pentatricopeptide repeat...   316   2e-83
ref|XP_002439151.1| hypothetical protein SORBIDRAFT_09g001360 [S...   314   6e-83
gb|EMT01880.1| hypothetical protein F775_14784 [Aegilops tauschii]    312   3e-82
ref|XP_004981863.1| PREDICTED: putative pentatricopeptide repeat...   311   4e-82
gb|EMS68422.1| hypothetical protein TRIUR3_23855 [Triticum urartu]    309   2e-81

>ref|XP_004304947.1| PREDICTED: pentatricopeptide repeat-containing protein At3g28660-like
            [Fragaria vesca subsp. vesca]
          Length = 501

 Score =  394 bits (1012), Expect = e-107
 Identities = 200/326 (61%), Positives = 231/326 (70%)
 Frame = +3

Query: 6    KVFDEIPQRDAVQWNVMIDGCVQFGLPSEGLNVFRRMLVVSDVEPDEFCVATGLTACAHS 185
            KVFDEIP+RD VQWNV+++G V+ GL SE L VF+ MLV    EPD FCVATGL ACAH 
Sbjct: 170  KVFDEIPERDMVQWNVIMNGYVKRGLASEALRVFQDMLV-RGFEPDGFCVATGLAACAHL 228

Query: 186  GALQQGMWIHEYVKKRDGLRRDVFVGTALVDMYAKCGCIDNAVEVFEEMPKRNVFSWSAM 365
            GAL QG WIHEYV+KR+GL  DVF+GTALVDMYAKCGCID AVE FE M KRNV SWSAM
Sbjct: 229  GALWQGKWIHEYVRKREGLNSDVFIGTALVDMYAKCGCIDLAVEAFEGMGKRNVVSWSAM 288

Query: 366  IGAFALHGFARGAVCCLERMLREDGLRPDGVVILGVLTACTHXXXXXXXXXXXXNMEALY 545
            IGA+ +HG+A  A+ CLERM  +DG++PDGVV+LGVLTAC H            NM+A Y
Sbjct: 289  IGAYGVHGYATEAISCLERMQVDDGVKPDGVVLLGVLTACNHGGLLEKGKALLDNMKAKY 348

Query: 546  SVVPKHEHYSCVVDLLCRAGRLDDALALIQRMPMKPLASVWGALLSACRIHXXXXXXXXX 725
             +VPKHEHYSCV+DLLC+AGRL DA  LI+RMPMKPLASVWGALLS CRIH         
Sbjct: 349  GIVPKHEHYSCVIDLLCKAGRLSDAFELIRRMPMKPLASVWGALLSGCRIHNNVDLAEIA 408

Query: 726  XXXXXXXDHDNGSEEDGAYVQLSNIYLDANRVEDARTVRKMMGERGIKKTPGCXXXXXXX 905
                    +D+  EE GAYVQLSNIYL A R EDA  +RKM+GE+GIKKTPGC       
Sbjct: 409  VEQLLQVANDDRGEEVGAYVQLSNIYLGAQRSEDALRIRKMIGEKGIKKTPGCSMLEVDG 468

Query: 906  XXXXXXXXDVVHLCRFEMGAVLDLLS 983
                    DV H    ++  +LDL+S
Sbjct: 469  KVNEFVSGDVSHSHCVQICTMLDLIS 494



 Score = 92.4 bits (228), Expect = 5e-16
 Identities = 61/237 (25%), Positives = 108/237 (45%), Gaps = 7/237 (2%)
 Frame = +3

Query: 9   VFDEIPQRDAVQWNVMIDGCVQFGLPSEGLNVFRRMLVVSDVEPDEFCVATGLTACAHSG 188
           +F ++P  +A  +N +I        P   +  F+ M    D+EPD F     +  C + G
Sbjct: 68  IFHQVPAPNAYMYNTLIRAHSASSDPHLAMYYFQLMSKQIDLEPDNFTFHFAILGCVNCG 127

Query: 189 ALQQGMWIHEYVKKRDGLRRDVFVGTALVDMYAKCGCIDNAVEVFEEMPKRNVFSWSAMI 368
            +  G  +H  V K   +  D  V TA+V +Y +CG + +A +VF+E+P+R++  W+ ++
Sbjct: 128 WIGPGRQMHCLVVKNGLVAADAHVQTAVVRLYVECGVLGDAHKVFDEIPERDMVQWNVIM 187

Query: 369 GAFALHGFARGAVCCLERMLREDGLRPDGVVILGVLTACTHXXXXXXXXXXXXNMEALYS 548
             +   G A  A+   + ML   G  PDG  +   L AC H              + ++ 
Sbjct: 188 NGYVKRGLASEALRVFQDMLVR-GFEPDGFCVATGLAACAHLGALWQG-------KWIHE 239

Query: 549 VVPKHEHY-------SCVVDLLCRAGRLDDALALIQRMPMKPLASVWGALLSACRIH 698
            V K E         + +VD+  + G +D A+   + M  + + S W A++ A  +H
Sbjct: 240 YVRKREGLNSDVFIGTALVDMYAKCGCIDLAVEAFEGMGKRNVVS-WSAMIGAYGVH 295


>ref|XP_007216409.1| hypothetical protein PRUPE_ppa022709mg, partial [Prunus persica]
            gi|462412559|gb|EMJ17608.1| hypothetical protein
            PRUPE_ppa022709mg, partial [Prunus persica]
          Length = 541

 Score =  389 bits (1000), Expect = e-105
 Identities = 201/334 (60%), Positives = 232/334 (69%)
 Frame = +3

Query: 3    RKVFDEIPQRDAVQWNVMIDGCVQFGLPSEGLNVFRRMLVVSDVEPDEFCVATGLTACAH 182
            +KVFDEIP+RD +QWNV+++G V+ GL SE L VFR MLV    EPD FCVATGL ACAH
Sbjct: 154  KKVFDEIPERDVIQWNVLMNGYVRCGLASEALKVFRDMLVTG-FEPDNFCVATGLAACAH 212

Query: 183  SGALQQGMWIHEYVKKRDGLRRDVFVGTALVDMYAKCGCIDNAVEVFEEMPKRNVFSWSA 362
             GAL+QG WI EYVKKR GL+ DVF+GTALVDMYAKCGCID AVE FE MPKRNV SW+A
Sbjct: 213  LGALRQGKWIDEYVKKRTGLKSDVFIGTALVDMYAKCGCIDLAVEAFEGMPKRNVVSWAA 272

Query: 363  MIGAFALHGFARGAVCCLERMLREDGLRPDGVVILGVLTACTHXXXXXXXXXXXXNMEAL 542
            MIG FA HG A  A+  LERM  +DGLRPDGVV+L VL ACTH            NM+  
Sbjct: 273  MIGGFAAHGCATNAIHSLERMQVDDGLRPDGVVLLVVLMACTHAGLLEKGKLLLDNMKTQ 332

Query: 543  YSVVPKHEHYSCVVDLLCRAGRLDDALALIQRMPMKPLASVWGALLSACRIHXXXXXXXX 722
            Y +VPKHEHYSCV+DLLC+AGRL++AL LI++MPMKPLASVWGALLS CRIH        
Sbjct: 333  YGIVPKHEHYSCVIDLLCKAGRLNEALKLIRKMPMKPLASVWGALLSGCRIHNNVDLAEL 392

Query: 723  XXXXXXXXDHDNGSEEDGAYVQLSNIYLDANRVEDARTVRKMMGERGIKKTPGCXXXXXX 902
                    ++D   EE GAYVQLSNIYL A R EDA  +RKM+GE GIKKTPGC      
Sbjct: 393  AVKELLQLENDVRGEEVGAYVQLSNIYLGARRGEDAIRIRKMIGESGIKKTPGCSMIEVD 452

Query: 903  XXXXXXXXXDVVHLCRFEMGAVLDLLSLQMIDYN 1004
                     DV H  +  + A+LDL+     +YN
Sbjct: 453  GKVNEFVSGDVSHSHQAWICAMLDLILFLEDNYN 486



 Score = 91.3 bits (225), Expect = 1e-15
 Identities = 60/230 (26%), Positives = 105/230 (45%)
 Frame = +3

Query: 9   VFDEIPQRDAVQWNVMIDGCVQFGLPSEGLNVFRRMLVVSDVEPDEFCVATGLTACAHSG 188
           +F++I   ++  +N +I    +   P   ++ F  ML  S + PD +     + ACA+  
Sbjct: 53  LFNQIQTPNSYLYNTLIRAYSRSSQPHLAVHYFLLMLKQSSLGPDNYTFNFVILACANCS 112

Query: 189 ALQQGMWIHEYVKKRDGLRRDVFVGTALVDMYAKCGCIDNAVEVFEEMPKRNVFSWSAMI 368
            L  G  IH +V K      D  V TALV +YA+C  +D++ +VF+E+P+R+V  W+ ++
Sbjct: 113 WLVSGRQIHNWVVKNGLFLVDAHVQTALVRLYAECKVLDDSKKVFDEIPERDVIQWNVLM 172

Query: 369 GAFALHGFARGAVCCLERMLREDGLRPDGVVILGVLTACTHXXXXXXXXXXXXNMEALYS 548
             +   G A  A+     ML   G  PD   +   L AC H             ++    
Sbjct: 173 NGYVRCGLASEALKVFRDML-VTGFEPDNFCVATGLAACAHLGALRQGKWIDEYVKKRTG 231

Query: 549 VVPKHEHYSCVVDLLCRAGRLDDALALIQRMPMKPLASVWGALLSACRIH 698
           +       + +VD+  + G +D A+   + MP + + S W A++     H
Sbjct: 232 LKSDVFIGTALVDMYAKCGCIDLAVEAFEGMPKRNVVS-WAAMIGGFAAH 280


>emb|CBI35029.3| unnamed protein product [Vitis vinifera]
          Length = 1596

 Score =  389 bits (998), Expect = e-105
 Identities = 196/329 (59%), Positives = 228/329 (69%)
 Frame = +3

Query: 3    RKVFDEIPQRDAVQWNVMIDGCVQFGLPSEGLNVFRRMLVVSDVEPDEFCVATGLTACAH 182
            RK+FDEIP  D VQWNV+++G V+ GL  E LN FR MLV S VEPDEFC+ T L  CA 
Sbjct: 161  RKLFDEIPNLDVVQWNVLLNGYVRRGLAPEALNAFRNMLV-SGVEPDEFCLTTALKGCAQ 219

Query: 183  SGALQQGMWIHEYVKKRDGLRRDVFVGTALVDMYAKCGCIDNAVEVFEEMPKRNVFSWSA 362
             GALQQG WIHEYV KR  L  DVF+GTALVDMYAKCGCID +VEVFE M KRNVFSWSA
Sbjct: 220  LGALQQGKWIHEYVTKRKWLEADVFIGTALVDMYAKCGCIDRSVEVFEGMTKRNVFSWSA 279

Query: 363  MIGAFALHGFARGAVCCLERMLREDGLRPDGVVILGVLTACTHXXXXXXXXXXXXNMEAL 542
            MIG FALHG  R A+ CLERM  EDGLRPDGVV+LGV+ AC H            NMEA 
Sbjct: 280  MIGGFALHGHVRKAMQCLERMQVEDGLRPDGVVLLGVIMACAHAGLQEEGQFLLENMEAR 339

Query: 543  YSVVPKHEHYSCVVDLLCRAGRLDDALALIQRMPMKPLASVWGALLSACRIHXXXXXXXX 722
            Y ++PKHEHYSC+VDLLCRAG+LD+AL LI+RMPMKP A+VWGALLS CR H        
Sbjct: 340  YGILPKHEHYSCMVDLLCRAGQLDEALKLIRRMPMKPRAAVWGALLSGCRTHNNVDLAEL 399

Query: 723  XXXXXXXXDHDNGSEEDGAYVQLSNIYLDANRVEDARTVRKMMGERGIKKTPGCXXXXXX 902
                     + +G+EEDGAYVQLSNIYL A + EDA  +R+M+G++ IK  PGC      
Sbjct: 400  AARELLMVGNGDGTEEDGAYVQLSNIYLAAQKCEDACRIRRMIGDKRIKTKPGCSLIEVE 459

Query: 903  XXXXXXXXXDVVHLCRFEMGAVLDLLSLQ 989
                     D+ H C  ++  +LDL+SLQ
Sbjct: 460  GEVNQFVSGDISHPCLAQIHEMLDLVSLQ 488



 Score = 77.8 bits (190), Expect = 1e-11
 Identities = 56/237 (23%), Positives = 104/237 (43%), Gaps = 7/237 (2%)
 Frame = +3

Query: 9   VFDEIPQRDAVQWNVMIDGCVQFGLPSEGLNVFRRMLVVSDVEPDEFCVATGLTACAHSG 188
           +F +I   +   +N +I    +   P   L+ F+ ML   +V PD+      ++AC +S 
Sbjct: 60  IFSQIQNPNLFAYNTLIRAYSRSSTPQLALHYFQLMLDDENVGPDQHTFPFIISACTNSL 119

Query: 189 ALQQGMWIHEYVKKRDGLRRDVFVGTALVDMYAKCGCIDNAVEVFEEMPKRNVFSWSAMI 368
            +  G  IH +V K      D  V TALV  YA+C  + +A ++F+E+P  +V  W+ ++
Sbjct: 120 WMLLGKQIHNWVLKNGVASSDRHVQTALVRFYAECCAMGDARKLFDEIPNLDVVQWNVLL 179

Query: 369 GAFALHGFARGAVCCLERMLREDGLRPDGVVILGVLTACTHXXXXXXXXXXXXNMEALYS 548
             +   G A  A+     ML   G+ PD   +   L  C                + ++ 
Sbjct: 180 NGYVRRGLAPEALNAFRNML-VSGVEPDEFCLTTALKGCAQLGALQQG-------KWIHE 231

Query: 549 VVPKHEHY-------SCVVDLLCRAGRLDDALALIQRMPMKPLASVWGALLSACRIH 698
            V K +         + +VD+  + G +D ++ + + M  + + S W A++    +H
Sbjct: 232 YVTKRKWLEADVFIGTALVDMYAKCGCIDRSVEVFEGMTKRNVFS-WSAMIGGFALH 287


>ref|XP_002276684.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g28640-like [Vitis vinifera]
          Length = 511

 Score =  389 bits (998), Expect = e-105
 Identities = 196/329 (59%), Positives = 228/329 (69%)
 Frame = +3

Query: 3    RKVFDEIPQRDAVQWNVMIDGCVQFGLPSEGLNVFRRMLVVSDVEPDEFCVATGLTACAH 182
            RK+FDEIP  D VQWNV+++G V+ GL  E LN FR MLV S VEPDEFC+ T L  CA 
Sbjct: 161  RKLFDEIPNLDVVQWNVLLNGYVRRGLAPEALNAFRNMLV-SGVEPDEFCLTTALKGCAQ 219

Query: 183  SGALQQGMWIHEYVKKRDGLRRDVFVGTALVDMYAKCGCIDNAVEVFEEMPKRNVFSWSA 362
             GALQQG WIHEYV KR  L  DVF+GTALVDMYAKCGCID +VEVFE M KRNVFSWSA
Sbjct: 220  LGALQQGKWIHEYVTKRKWLEADVFIGTALVDMYAKCGCIDRSVEVFEGMTKRNVFSWSA 279

Query: 363  MIGAFALHGFARGAVCCLERMLREDGLRPDGVVILGVLTACTHXXXXXXXXXXXXNMEAL 542
            MIG FALHG  R A+ CLERM  EDGLRPDGVV+LGV+ AC H            NMEA 
Sbjct: 280  MIGGFALHGHVRKAMQCLERMQVEDGLRPDGVVLLGVIMACAHAGLQEEGQFLLENMEAR 339

Query: 543  YSVVPKHEHYSCVVDLLCRAGRLDDALALIQRMPMKPLASVWGALLSACRIHXXXXXXXX 722
            Y ++PKHEHYSC+VDLLCRAG+LD+AL LI+RMPMKP A+VWGALLS CR H        
Sbjct: 340  YGILPKHEHYSCMVDLLCRAGQLDEALKLIRRMPMKPRAAVWGALLSGCRTHNNVDLAEL 399

Query: 723  XXXXXXXXDHDNGSEEDGAYVQLSNIYLDANRVEDARTVRKMMGERGIKKTPGCXXXXXX 902
                     + +G+EEDGAYVQLSNIYL A + EDA  +R+M+G++ IK  PGC      
Sbjct: 400  AARELLMVGNGDGTEEDGAYVQLSNIYLAAQKCEDACRIRRMIGDKRIKTKPGCSLIEVE 459

Query: 903  XXXXXXXXXDVVHLCRFEMGAVLDLLSLQ 989
                     D+ H C  ++  +LDL+SLQ
Sbjct: 460  GEVNQFVSGDISHPCLAQIHEMLDLVSLQ 488



 Score = 77.8 bits (190), Expect = 1e-11
 Identities = 56/237 (23%), Positives = 104/237 (43%), Gaps = 7/237 (2%)
 Frame = +3

Query: 9   VFDEIPQRDAVQWNVMIDGCVQFGLPSEGLNVFRRMLVVSDVEPDEFCVATGLTACAHSG 188
           +F +I   +   +N +I    +   P   L+ F+ ML   +V PD+      ++AC +S 
Sbjct: 60  IFSQIQNPNLFAYNTLIRAYSRSSTPQLALHYFQLMLDDENVGPDQHTFPFIISACTNSL 119

Query: 189 ALQQGMWIHEYVKKRDGLRRDVFVGTALVDMYAKCGCIDNAVEVFEEMPKRNVFSWSAMI 368
            +  G  IH +V K      D  V TALV  YA+C  + +A ++F+E+P  +V  W+ ++
Sbjct: 120 WMLLGKQIHNWVLKNGVASSDRHVQTALVRFYAECCAMGDARKLFDEIPNLDVVQWNVLL 179

Query: 369 GAFALHGFARGAVCCLERMLREDGLRPDGVVILGVLTACTHXXXXXXXXXXXXNMEALYS 548
             +   G A  A+     ML   G+ PD   +   L  C                + ++ 
Sbjct: 180 NGYVRRGLAPEALNAFRNML-VSGVEPDEFCLTTALKGCAQLGALQQG-------KWIHE 231

Query: 549 VVPKHEHY-------SCVVDLLCRAGRLDDALALIQRMPMKPLASVWGALLSACRIH 698
            V K +         + +VD+  + G +D ++ + + M  + + S W A++    +H
Sbjct: 232 YVTKRKWLEADVFIGTALVDMYAKCGCIDRSVEVFEGMTKRNVFS-WSAMIGGFALH 287


>ref|XP_002517451.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223543462|gb|EEF44993.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 428

 Score =  371 bits (952), Expect = e-100
 Identities = 191/330 (57%), Positives = 230/330 (69%)
 Frame = +3

Query: 6    KVFDEIPQRDAVQWNVMIDGCVQFGLPSEGLNVFRRMLVVSDVEPDEFCVATGLTACAHS 185
            K+FDEI + D +QWNV+++G ++  L SE L VFR M V   VEPDEFCV T L ACA S
Sbjct: 85   KMFDEIHRPDVIQWNVLMNGYIESNLESEALRVFRFMFV-KGVEPDEFCVTTALAACAKS 143

Query: 186  GALQQGMWIHEYVKKRDGLRRDVFVGTALVDMYAKCGCIDNAVEVFEEMPKRNVFSWSAM 365
            GAL QG WIHEYVKK   L  DVF+GTALVDMYAKCG I+ AV+VFEEMPKR+ FSW+AM
Sbjct: 144  GALWQGKWIHEYVKKTT-LGFDVFIGTALVDMYAKCGWINMAVQVFEEMPKRSAFSWAAM 202

Query: 366  IGAFALHGFARGAVCCLERMLREDGLRPDGVVILGVLTACTHXXXXXXXXXXXXNMEALY 545
            IG +A+HG+AR A+  LERM  EDGLRPDGVV+LGVLTACTH            NM+A Y
Sbjct: 203  IGGYAIHGYAREAIHYLERMHAEDGLRPDGVVLLGVLTACTHAGLQEEGRFLLDNMKARY 262

Query: 546  SVVPKHEHYSCVVDLLCRAGRLDDALALIQRMPMKPLASVWGALLSACRIHXXXXXXXXX 725
             +VP+HEHYSCVVDLLCRAGR D+ALALI+RMPMKPLASVWGA+LS+CR H         
Sbjct: 263  GIVPRHEHYSCVVDLLCRAGRWDEALALIKRMPMKPLASVWGAVLSSCRTHKNAELAEFA 322

Query: 726  XXXXXXXDHDNGSEEDGAYVQLSNIYLDANRVEDARTVRKMMGERGIKKTPGCXXXXXXX 905
                   ++ NG+EED A+VQL NIYL   R EDA  + +++GERG+KKTPGC       
Sbjct: 323  VQELLQLENGNGNEEDAAFVQLWNIYLSTGRGEDASKIHRLIGERGLKKTPGCSMIEVNG 382

Query: 906  XXXXXXXXDVVHLCRFEMGAVLDLLSLQMI 995
                    DV +    +M A+L+LL   +I
Sbjct: 383  MVNEFVSGDVSNKDVAQMHAILELLLPDLI 412


>ref|XP_006290938.1| hypothetical protein CARUB_v10017051mg [Capsella rubella]
            gi|482559645|gb|EOA23836.1| hypothetical protein
            CARUB_v10017051mg [Capsella rubella]
          Length = 507

 Score =  360 bits (924), Expect = 1e-96
 Identities = 178/333 (53%), Positives = 224/333 (67%)
 Frame = +3

Query: 3    RKVFDEIPQRDAVQWNVMIDGCVQFGLPSEGLNVFRRMLVVSDVEPDEFCVATGLTACAH 182
            RKVFDEIPQ D V+W+V+++G V+ GL SEGL VFR MLV   +EPDEF V T LTACA 
Sbjct: 175  RKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLV-RGIEPDEFSVTTALTACAQ 233

Query: 183  SGALQQGMWIHEYVKKRDGLRRDVFVGTALVDMYAKCGCIDNAVEVFEEMPKRNVFSWSA 362
             GAL QG WIHE+VKK+  ++ DVFVGTALVDMYAKCGCI+ AVEVFE++ +RNVFSW+A
Sbjct: 234  VGALAQGKWIHEFVKKKKWVKSDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAA 293

Query: 363  MIGAFALHGFARGAVCCLERMLREDGLRPDGVVILGVLTACTHXXXXXXXXXXXXNMEAL 542
            +IG +A +G+AR A+ CL+RM RED ++PD VV+LGVL AC H            NME+ 
Sbjct: 294  LIGGYAAYGYAREAIMCLDRMEREDAIKPDSVVLLGVLAACAHGGFLQEGRSMLDNMESR 353

Query: 543  YSVVPKHEHYSCVVDLLCRAGRLDDALALIQRMPMKPLASVWGALLSACRIHXXXXXXXX 722
            Y + PKHEHYSC+VDL+CRAGRLD AL LI++MPMKPLASVWGALL+ CR H        
Sbjct: 354  YGITPKHEHYSCIVDLMCRAGRLDGALDLIEKMPMKPLASVWGALLNGCRTHKNVELGEL 413

Query: 723  XXXXXXXXDHDNGSEEDGAYVQLSNIYLDANRVEDARTVRKMMGERGIKKTPGCXXXXXX 902
                    +  N  EE+ A VQLSNIY    R  +A  +R M+ ++GIKK PGC      
Sbjct: 414  AVKNLLELEKGNVDEEEAALVQLSNIYFSVQRNPEASKIRGMIDQKGIKKAPGCSVLEVD 473

Query: 903  XXXXXXXXXDVVHLCRFEMGAVLDLLSLQMIDY 1001
                     D+ H    ++  V+ LLS+  + +
Sbjct: 474  GDVTRFVSGDLSHPNLLQIHTVIHLLSVDALQF 506



 Score = 68.2 bits (165), Expect = 1e-08
 Identities = 56/231 (24%), Positives = 101/231 (43%), Gaps = 7/231 (3%)
 Frame = +3

Query: 9   VFDEIPQRDAVQWNVMIDGCVQFGLPSEGLNVFRRMLVVSDVEPDEFCVATG-------L 167
           +FD I  R+   ++ MI  C +  LP  GL  FR  L+VS+ E +E  +A         +
Sbjct: 69  IFDSIEIRNTFVYDTMIRICSRSSLPQLGLRYFR--LMVSEDEKEEEDIAPSYLTFHFLI 126

Query: 168 TACAHSGALQQGMWIHEYVKKRDGLRRDVFVGTALVDMYAKCGCIDNAVEVFEEMPKRNV 347
            AC  +     G  IH +V K      D  V T ++ +Y +   + +A +VF+E+P+ +V
Sbjct: 127 VACLKACLFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDRVLVDARKVFDEIPQPDV 186

Query: 348 FSWSAMIGAFALHGFARGAVCCLERMLREDGLRPDGVVILGVLTACTHXXXXXXXXXXXX 527
             W  ++  +   G     +     ML   G+ PD   +   LTAC              
Sbjct: 187 VKWDVLMNGYVRCGLGSEGLEVFREMLVR-GIEPDEFSVTTALTACAQVGALAQGKWIHE 245

Query: 528 NMEALYSVVPKHEHYSCVVDLLCRAGRLDDALALIQRMPMKPLASVWGALL 680
            ++    V       + +VD+  + G ++ A+ + +++  + + S W AL+
Sbjct: 246 FVKKKKWVKSDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFS-WAALI 295


>ref|NP_189505.2| putative pentatricopeptide repeat-containing protein [Arabidopsis
            thaliana] gi|75273576|sp|Q9LJJ1.1|PP259_ARATH RecName:
            Full=Putative pentatricopeptide repeat-containing protein
            At3g28640 gi|9294278|dbj|BAB02180.1| unnamed protein
            product [Arabidopsis thaliana]
            gi|332643948|gb|AEE77469.1| putative pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 504

 Score =  360 bits (923), Expect = 1e-96
 Identities = 180/331 (54%), Positives = 224/331 (67%)
 Frame = +3

Query: 3    RKVFDEIPQRDAVQWNVMIDGCVQFGLPSEGLNVFRRMLVVSDVEPDEFCVATGLTACAH 182
            RKVFDEIPQ D V+W+V+++G V+ GL SEGL VFR MLV   +EPDEF V T LTACA 
Sbjct: 172  RKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLV-KGLEPDEFSVTTALTACAQ 230

Query: 183  SGALQQGMWIHEYVKKRDGLRRDVFVGTALVDMYAKCGCIDNAVEVFEEMPKRNVFSWSA 362
             GAL QG WIHE+VKK+  +  DVFVGTALVDMYAKCGCI+ AVEVF+++ +RNVFSW+A
Sbjct: 231  VGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAA 290

Query: 363  MIGAFALHGFARGAVCCLERMLREDGLRPDGVVILGVLTACTHXXXXXXXXXXXXNMEAL 542
            +IG +A +G+A+ A+ CLER+ REDG++PD VV+LGVL AC H            NMEA 
Sbjct: 291  LIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEAR 350

Query: 543  YSVVPKHEHYSCVVDLLCRAGRLDDALALIQRMPMKPLASVWGALLSACRIHXXXXXXXX 722
            Y + PKHEHYSC+VDL+CRAGRLDDAL LI++MPMKPLASVWGALL+ CR H        
Sbjct: 351  YEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNVELGEL 410

Query: 723  XXXXXXXXDHDNGSEEDGAYVQLSNIYLDANRVEDARTVRKMMGERGIKKTPGCXXXXXX 902
                    +  N  EE+ A VQLSNIY    R  +A  VR M+ +RG++KTPG       
Sbjct: 411  AVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGVRKTPGWSVLEVD 470

Query: 903  XXXXXXXXXDVVHLCRFEMGAVLDLLSLQMI 995
                     DV H    ++  V+ LLS+  +
Sbjct: 471  GNVTKFVSGDVSHPNLLQIHTVIHLLSVDAL 501



 Score = 59.7 bits (143), Expect = 4e-06
 Identities = 50/226 (22%), Positives = 95/226 (42%), Gaps = 2/226 (0%)
 Frame = +3

Query: 9   VFDEIPQRDAVQWNVMIDGCVQFGLPSEGLNVFRRMLVVS--DVEPDEFCVATGLTACAH 182
           +FD I   ++  ++ MI  C +   P  GL  F  M+     D+ P        + AC  
Sbjct: 69  IFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLK 128

Query: 183 SGALQQGMWIHEYVKKRDGLRRDVFVGTALVDMYAKCGCIDNAVEVFEEMPKRNVFSWSA 362
           +     G  IH +V K      D  V T ++ +Y +   + +A +VF+E+P+ +V  W  
Sbjct: 129 ACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDV 188

Query: 363 MIGAFALHGFARGAVCCLERMLREDGLRPDGVVILGVLTACTHXXXXXXXXXXXXNMEAL 542
           ++  +   G     +     ML + GL PD   +   LTAC               ++  
Sbjct: 189 LMNGYVRCGLGSEGLEVFREMLVK-GLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKK 247

Query: 543 YSVVPKHEHYSCVVDLLCRAGRLDDALALIQRMPMKPLASVWGALL 680
             +       + +VD+  + G ++ A+ + +++  + + S W AL+
Sbjct: 248 SWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFS-WAALI 292


>gb|EXB36666.1| hypothetical protein L484_002079 [Morus notabilis]
          Length = 487

 Score =  359 bits (921), Expect = 2e-96
 Identities = 180/322 (55%), Positives = 217/322 (67%)
 Frame = +3

Query: 30   RDAVQWNVMIDGCVQFGLPSEGLNVFRRMLVVSDVEPDEFCVATGLTACAHSGALQQGMW 209
            RD  QWN ++DG ++  L SE L VFR ML    VE DE C  T LTACA SGAL  G W
Sbjct: 148  RDLFQWNALMDGYIRCSLASEALGVFRDMLKFG-VELDECCAVTALTACAQSGALWWGKW 206

Query: 210  IHEYVKKRDGLRRDVFVGTALVDMYAKCGCIDNAVEVFEEMPKRNVFSWSAMIGAFALHG 389
            IHEY++KR+G   DVFVGTALVDMY KCGC+D AVEVFE+MP RN FSW+A+IG FA+HG
Sbjct: 207  IHEYIEKREGFESDVFVGTALVDMYTKCGCLDMAVEVFEKMPTRNAFSWAAIIGGFAVHG 266

Query: 390  FARGAVCCLERMLREDGLRPDGVVILGVLTACTHXXXXXXXXXXXXNMEALYSVVPKHEH 569
                A+ CLERM  +DGL+PDGVV+LGVLTACTH            NME+ Y ++PKHEH
Sbjct: 267  QVMEAIRCLERMQADDGLKPDGVVLLGVLTACTHAGLQKEGQLLLHNMESQYGILPKHEH 326

Query: 570  YSCVVDLLCRAGRLDDALALIQRMPMKPLASVWGALLSACRIHXXXXXXXXXXXXXXXXD 749
            YSCVVDLLCRAG+L +A  LI+RMPMKPLASVWGALLS CRI                 +
Sbjct: 327  YSCVVDLLCRAGKLREAYQLIRRMPMKPLASVWGALLSGCRIRNYVDLAELAVKELVLLE 386

Query: 750  HDNGSEEDGAYVQLSNIYLDANRVEDARTVRKMMGERGIKKTPGCXXXXXXXXXXXXXXX 929
            +++   +DG YVQLSNIYL A R EDA  +RKM+G++GI+KTPGC               
Sbjct: 387  NEDKRGQDGVYVQLSNIYLAAQRTEDAVLIRKMIGDKGIRKTPGCSTVEVDGRVNEFVSG 446

Query: 930  DVVHLCRFEMGAVLDLLSLQMI 995
            D+VH C+ ++  +L LLS   I
Sbjct: 447  DIVHSCQAKICVMLYLLSSNSI 468



 Score = 60.5 bits (145), Expect = 2e-06
 Identities = 40/157 (25%), Positives = 73/157 (46%), Gaps = 4/157 (2%)
 Frame = +3

Query: 6   KVFDEIPQRDAVQWNVMIDGCVQFGLPSEGLNVFRRMLVVSDVEPDEFCVATGLTACAHS 185
           +VF+++P R+A  W  +I G    G   E +    RM     ++PD   +   LTAC H+
Sbjct: 242 EVFEKMPTRNAFSWAAIIGGFAVHGQVMEAIRCLERMQADDGLKPDGVVLLGVLTACTHA 301

Query: 186 GALQQGMWIHEYVKKRDGLRRDVFVGTALVDMYAKCGCIDNAVEVFEEMPKRNVFS-WSA 362
           G  ++G  +   ++ + G+       + +VD+  + G +  A ++   MP + + S W A
Sbjct: 302 GLQKEGQLLLHNMESQYGILPKHEHYSCVVDLLCRAGKLREAYQLIRRMPMKPLASVWGA 361

Query: 363 MIGAFALHGF---ARGAVCCLERMLREDGLRPDGVVI 464
           ++    +  +   A  AV  L  +  ED    DGV +
Sbjct: 362 LLSGCRIRNYVDLAELAVKELVLLENEDKRGQDGVYV 398


>ref|XP_002877120.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297322958|gb|EFH53379.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 399

 Score =  358 bits (920), Expect = 3e-96
 Identities = 181/330 (54%), Positives = 223/330 (67%)
 Frame = +3

Query: 6    KVFDEIPQRDAVQWNVMIDGCVQFGLPSEGLNVFRRMLVVSDVEPDEFCVATGLTACAHS 185
            KVFDEIP+ D V+W+V+++G V+ GL SEGL VFR MLV   VEPDEF V T LTACA  
Sbjct: 68   KVFDEIPKPDVVKWDVLMNGYVRCGLGSEGLEVFREMLV-RGVEPDEFSVTTALTACAQV 126

Query: 186  GALQQGMWIHEYVKKRDGLRRDVFVGTALVDMYAKCGCIDNAVEVFEEMPKRNVFSWSAM 365
            GAL QG WIHE+VKK+  +  DVFVGTALVDMYAKCGCI+ AVEVFE++ +RNVFSW+A+
Sbjct: 127  GALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIEMAVEVFEKLSRRNVFSWAAL 186

Query: 366  IGAFALHGFARGAVCCLERMLREDGLRPDGVVILGVLTACTHXXXXXXXXXXXXNMEALY 545
            IG +A +G+A+ A+ CL+RM REDG++PD VV+LGVL AC H            NMEA Y
Sbjct: 187  IGGYAAYGYAKKAMTCLDRMEREDGIKPDSVVLLGVLAACAHGGFLQEGRAMLGNMEARY 246

Query: 546  SVVPKHEHYSCVVDLLCRAGRLDDALALIQRMPMKPLASVWGALLSACRIHXXXXXXXXX 725
             + PKHEHYSC+VDL+CRAGRLDDAL LI++MPMKPLASVWGALL+ CR H         
Sbjct: 247  GITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNVELGELA 306

Query: 726  XXXXXXXDHDNGSEEDGAYVQLSNIYLDANRVEDARTVRKMMGERGIKKTPGCXXXXXXX 905
                   +  N  EE+ A VQLSNIY    R  +A  VR M+ +RGI+KTPG        
Sbjct: 307  VKNLLDLEKGNAEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGIRKTPGWSVLEVDG 366

Query: 906  XXXXXXXXDVVHLCRFEMGAVLDLLSLQMI 995
                    DV H    ++  V+ LLS+  +
Sbjct: 367  NVTKFVSGDVSHPNLLQIHTVIHLLSVDAL 396


>ref|NP_189507.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75273574|sp|Q9LJI9.1|PP260_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At3g28660 gi|9294280|dbj|BAB02182.1| unnamed protein
            product [Arabidopsis thaliana] gi|20259531|gb|AAM13885.1|
            unknown protein [Arabidopsis thaliana]
            gi|24030460|gb|AAN41382.1| unknown protein [Arabidopsis
            thaliana] gi|332643950|gb|AEE77471.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 504

 Score =  356 bits (913), Expect = 2e-95
 Identities = 179/328 (54%), Positives = 222/328 (67%)
 Frame = +3

Query: 3    RKVFDEIPQRDAVQWNVMIDGCVQFGLPSEGLNVFRRMLVVSDVEPDEFCVATGLTACAH 182
            RKVFDEIPQ D V+W+V+++G V+ GL SEGL VF+ MLV   +EPDEF V T LTACA 
Sbjct: 172  RKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLV-RGIEPDEFSVTTALTACAQ 230

Query: 183  SGALQQGMWIHEYVKKRDGLRRDVFVGTALVDMYAKCGCIDNAVEVFEEMPKRNVFSWSA 362
             GAL QG WIHE+VKK+  +  DVFVGTALVDMYAKCGCI+ AVEVFE++ +RNVFSW+A
Sbjct: 231  VGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAA 290

Query: 363  MIGAFALHGFARGAVCCLERMLREDGLRPDGVVILGVLTACTHXXXXXXXXXXXXNMEAL 542
            +IG +A +G+A+ A  CL+R+ REDG++PD VV+LGVL AC H            NMEA 
Sbjct: 291  LIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEAR 350

Query: 543  YSVVPKHEHYSCVVDLLCRAGRLDDALALIQRMPMKPLASVWGALLSACRIHXXXXXXXX 722
            Y + PKHEHYSC+VDL+CRAGRLDDAL LI++MPMKPLASVWGALL+ CR H        
Sbjct: 351  YGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNVELGEL 410

Query: 723  XXXXXXXXDHDNGSEEDGAYVQLSNIYLDANRVEDARTVRKMMGERGIKKTPGCXXXXXX 902
                    +  N  EE+ A VQLSNIY    R  +A  VR M+ +RGI+KTPG       
Sbjct: 411  AVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEAFKVRGMIEQRGIRKTPGWSLLEVD 470

Query: 903  XXXXXXXXXDVVHLCRFEMGAVLDLLSL 986
                     DV H    ++  ++ LLS+
Sbjct: 471  GIVTKFVSGDVSHPNLLQIHTLIHLLSV 498



 Score = 59.3 bits (142), Expect = 5e-06
 Identities = 49/226 (21%), Positives = 95/226 (42%), Gaps = 2/226 (0%)
 Frame = +3

Query: 9   VFDEIPQRDAVQWNVMIDGCVQFGLPSEGLNVFRRMLVVS--DVEPDEFCVATGLTACAH 182
           +FD I   ++  ++ MI  C +   P  GL  F  M+     D+ P        + AC  
Sbjct: 69  IFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLK 128

Query: 183 SGALQQGMWIHEYVKKRDGLRRDVFVGTALVDMYAKCGCIDNAVEVFEEMPKRNVFSWSA 362
           +     G  IH +V K      D  V T ++ +Y +   + +A +VF+E+P+ +V  W  
Sbjct: 129 ACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDV 188

Query: 363 MIGAFALHGFARGAVCCLERMLREDGLRPDGVVILGVLTACTHXXXXXXXXXXXXNMEAL 542
           ++  +   G     +   + ML   G+ PD   +   LTAC               ++  
Sbjct: 189 LMNGYVRCGLGSEGLEVFKEMLVR-GIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKK 247

Query: 543 YSVVPKHEHYSCVVDLLCRAGRLDDALALIQRMPMKPLASVWGALL 680
             +       + +VD+  + G ++ A+ + +++  + + S W AL+
Sbjct: 248 RWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFS-WAALI 292


>ref|XP_007032423.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
            [Theobroma cacao] gi|508711452|gb|EOY03349.1|
            Tetratricopeptide repeat (TPR)-like superfamily protein,
            putative [Theobroma cacao]
          Length = 499

 Score =  355 bits (912), Expect = 2e-95
 Identities = 176/327 (53%), Positives = 224/327 (68%), Gaps = 1/327 (0%)
 Frame = +3

Query: 3    RKVFDEIPQRDAVQWNVMIDGCVQFGLPSEGLNVFRRMLVVSDVEPDEFCVATGLTACAH 182
            RKVFDEI   D V+WNV++ G  +  L ++ L+VF+ +LV   ++PDEFC+ T LTACA 
Sbjct: 168  RKVFDEIAYVDVVKWNVLMSGLARCRLGTQALSVFKELLVFG-IQPDEFCLTTALTACAQ 226

Query: 183  SGALQQGMWIHEYVKKRDG-LRRDVFVGTALVDMYAKCGCIDNAVEVFEEMPKRNVFSWS 359
            +G+L++G WIHEY++KR+  L  DVF+GTALVDMYAKCGC+D AVEVFE M KRNV+SW+
Sbjct: 227  NGSLREGKWIHEYLRKREKCLELDVFIGTALVDMYAKCGCLDLAVEVFEGMSKRNVYSWA 286

Query: 360  AMIGAFALHGFARGAVCCLERMLREDGLRPDGVVILGVLTACTHXXXXXXXXXXXXNMEA 539
            AMIG FA+HG AR A+ C ERM + DG+RPDGVV+LGVLTACTH            NME 
Sbjct: 287  AMIGGFAVHGHARKAIHCFERM-QNDGIRPDGVVLLGVLTACTHAGLAEEGLFLLNNMEG 345

Query: 540  LYSVVPKHEHYSCVVDLLCRAGRLDDALALIQRMPMKPLASVWGALLSACRIHXXXXXXX 719
             Y +VPKHEHYSCVVDLLCR G+ D+AL LI+RMPM+PLASVWGALL++CRI+       
Sbjct: 346  QYRIVPKHEHYSCVVDLLCRTGKFDEALKLIRRMPMRPLASVWGALLNSCRIYNNVQLAE 405

Query: 720  XXXXXXXXXDHDNGSEEDGAYVQLSNIYLDANRVEDARTVRKMMGERGIKKTPGCXXXXX 899
                     +  +G EED A VQLSNIY  A + ED   +R+M+G+RG+KK PGC     
Sbjct: 406  LAVKELLELEDCDGDEEDAALVQLSNIYFSAQKSEDGHRIRRMIGDRGLKKAPGCSMIEV 465

Query: 900  XXXXXXXXXXDVVHLCRFEMGAVLDLL 980
                      D+ H    ++  +L LL
Sbjct: 466  DGRMTEFVSGDISHPLHSQIHTILRLL 492


>ref|XP_006338488.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g28640-like [Solanum tuberosum]
          Length = 512

 Score =  344 bits (882), Expect = 7e-92
 Identities = 179/328 (54%), Positives = 213/328 (64%)
 Frame = +3

Query: 3    RKVFDEIPQRDAVQWNVMIDGCVQFGLPSEGLNVFRRMLVVSDVEPDEFCVATGLTACAH 182
            RKVFDEI   D +Q NV++ G +Q GL  E L++F+ ML    V PDE+CV T L ACA 
Sbjct: 178  RKVFDEITDIDVIQCNVLMSGHLQSGLAKEALSIFQDMLG-RGVGPDEYCVTTALGACAQ 236

Query: 183  SGALQQGMWIHEYVKKRDGLRRDVFVGTALVDMYAKCGCIDNAVEVFEEMPKRNVFSWSA 362
             GAL+QG WIHE+V K + L  DVF+G+ALVDMYAKCGCI+ A EVFE MPKRN  SW+ 
Sbjct: 237  LGALEQGKWIHEHVTKSEWLEYDVFIGSALVDMYAKCGCINMASEVFESMPKRNKHSWAT 296

Query: 363  MIGAFALHGFARGAVCCLERMLREDGLRPDGVVILGVLTACTHXXXXXXXXXXXXNMEAL 542
            MI  FA+HG    A+ CLERM   DGL+PDGVVIL VL AC H             ME+L
Sbjct: 297  MIRGFAVHGRPELAISCLERMQVADGLKPDGVVILAVLAACAHSGLQKEGQGLLDEMESL 356

Query: 543  YSVVPKHEHYSCVVDLLCRAGRLDDALALIQRMPMKPLASVWGALLSACRIHXXXXXXXX 722
            Y V P+HEH+SCVVDLLCRAGRLDDAL LI+RMPMKP ASVWGALLS CR H        
Sbjct: 357  YGVTPEHEHFSCVVDLLCRAGRLDDALKLIRRMPMKPRASVWGALLSGCRNHNNVNLAEL 416

Query: 723  XXXXXXXXDHDNGSEEDGAYVQLSNIYLDANRVEDARTVRKMMGERGIKKTPGCXXXXXX 902
                    +  N +EED AYVQLSNIYL A + +DAR +R+ +G+RG++KTPG       
Sbjct: 417  AVKEILLVEDGNEAEEDSAYVQLSNIYLAARQCDDARRIRRRIGDRGLRKTPGYSAIEID 476

Query: 903  XXXXXXXXXDVVHLCRFEMGAVLDLLSL 986
                     DV H C  ++  VLDL  L
Sbjct: 477  GMINEFISGDVSHTCLADIHKVLDLTYL 504



 Score = 70.5 bits (171), Expect = 2e-09
 Identities = 59/245 (24%), Positives = 99/245 (40%), Gaps = 14/245 (5%)
 Frame = +3

Query: 6   KVFDEIPQRDAVQWNVMIDGCVQFGLPSEGLNVFRRMLVVSDVE-PDEFCVATGLTACAH 182
           ++F ++   +   +N +I        P   LN F  ML  S+   PD F     + ACA+
Sbjct: 75  RIFAQVQTPNTFLYNALIRAYSSSSQPQFSLNYFNLMLQTSNAAAPDSFTFPFLIIACAN 134

Query: 183 SGALQQGMWIHEYVKKRDGLRRDVFVGTALVDMYAKCGCIDNAVEVFEEMPKRNVFSWSA 362
                +G  IH +V K      +  V TAL+  Y  C  +D+A +VF+E+   +V   + 
Sbjct: 135 GPLEVEGKQIHSWVIKNSFSASNAHVQTALIRFYTNCKALDDARKVFDEITDIDVIQCNV 194

Query: 363 MIGAFALHGFARGAVCCLERMLREDGLRPDGVVILGVLTACTHXXXXXXXXXXXXNMEAL 542
           ++      G A+ A+   + ML   G+ PD   +   L AC               + AL
Sbjct: 195 LMSGHLQSGLAKEALSIFQDMLGR-GVGPDEYCVTTALGACA-------------QLGAL 240

Query: 543 YSVVPKHEHY-------------SCVVDLLCRAGRLDDALALIQRMPMKPLASVWGALLS 683
                 HEH              S +VD+  + G ++ A  + + MP +   S W  ++ 
Sbjct: 241 EQGKWIHEHVTKSEWLEYDVFIGSALVDMYAKCGCINMASEVFESMPKRNKHS-WATMIR 299

Query: 684 ACRIH 698
              +H
Sbjct: 300 GFAVH 304


>ref|XP_006395353.1| hypothetical protein EUTSA_v10005682mg [Eutrema salsugineum]
            gi|557091992|gb|ESQ32639.1| hypothetical protein
            EUTSA_v10005682mg [Eutrema salsugineum]
          Length = 505

 Score =  343 bits (881), Expect = 1e-91
 Identities = 170/331 (51%), Positives = 220/331 (66%)
 Frame = +3

Query: 3    RKVFDEIPQRDAVQWNVMIDGCVQFGLPSEGLNVFRRMLVVSDVEPDEFCVATGLTACAH 182
            RKVFDEIP  D V+W+V+++G V+ GL SEGL+VFR ML     EPD+F V T LTACA 
Sbjct: 173  RKVFDEIPHPDVVKWDVLMNGYVRCGLGSEGLHVFREMLA-RGTEPDKFSVTTALTACAQ 231

Query: 183  SGALQQGMWIHEYVKKRDGLRRDVFVGTALVDMYAKCGCIDNAVEVFEEMPKRNVFSWSA 362
             GAL QG  IH+ +KK+  L  D++VGTALVDMYAKCGCI+ A+EVFE + +RNVFSW+ 
Sbjct: 232  VGALAQGKLIHKLLKKKKLLESDIYVGTALVDMYAKCGCIETALEVFENLSRRNVFSWAV 291

Query: 363  MIGAFALHGFARGAVCCLERMLREDGLRPDGVVILGVLTACTHXXXXXXXXXXXXNMEAL 542
            +IG +A +G+A+ A+ CL++M REDG++PD VV+L VL AC H            NMEA 
Sbjct: 292  LIGGYAAYGYAKKAIMCLDQMEREDGIKPDSVVLLTVLAACAHGGFLQEGRALLDNMEAR 351

Query: 543  YSVVPKHEHYSCVVDLLCRAGRLDDALALIQRMPMKPLASVWGALLSACRIHXXXXXXXX 722
            Y + PKHEHYSC+VDL+CRAGRLDDA+ LI+ MPMKPLASVWGALL+ CR H        
Sbjct: 352  YGITPKHEHYSCIVDLICRAGRLDDAVDLIEGMPMKPLASVWGALLNGCRTHKNVELGEL 411

Query: 723  XXXXXXXXDHDNGSEEDGAYVQLSNIYLDANRVEDARTVRKMMGERGIKKTPGCXXXXXX 902
                    +  N  EE+ A VQLSNIYL A R  +A  +R+M+G++GI+K PGC      
Sbjct: 412  AVKNLLDLEKGNADEEEAALVQLSNIYLIAQRNTEASNIRRMIGQKGIRKAPGCSVLEVD 471

Query: 903  XXXXXXXXXDVVHLCRFEMGAVLDLLSLQMI 995
                     DV H    ++  ++ LLS+  +
Sbjct: 472  GNVTKFVSGDVSHQNLLQIHTMIHLLSVDAL 502



 Score = 66.2 bits (160), Expect = 4e-08
 Identities = 53/227 (23%), Positives = 93/227 (40%), Gaps = 3/227 (1%)
 Frame = +3

Query: 9   VFDEIPQRDAVQWNVMIDGCVQFGLPSEGLNVFRRMLVVSDVE---PDEFCVATGLTACA 179
           +FD I  R++  ++ MI  C +   P  G+  FR ML   D E   P        L A  
Sbjct: 69  IFDSIELRNSFVYDTMIRICSRSSRPHLGVRYFRLMLTEDDEEDIAPSYLTFHFLLVAFL 128

Query: 180 HSGALQQGMWIHEYVKKRDGLRRDVFVGTALVDMYAKCGCIDNAVEVFEEMPKRNVFSWS 359
           ++     G  IH +V K   L  D  V T ++ +Y +   + +A +VF+E+P  +V  W 
Sbjct: 129 NASLFSVGKQIHCWVIKNGVLSSDGHVQTGIIRLYIEGKVLPDARKVFDEIPHPDVVKWD 188

Query: 360 AMIGAFALHGFARGAVCCLERMLREDGLRPDGVVILGVLTACTHXXXXXXXXXXXXNMEA 539
            ++  +   G     +     ML   G  PD   +   LTAC               ++ 
Sbjct: 189 VLMNGYVRCGLGSEGLHVFREMLAR-GTEPDKFSVTTALTACAQVGALAQGKLIHKLLKK 247

Query: 540 LYSVVPKHEHYSCVVDLLCRAGRLDDALALIQRMPMKPLASVWGALL 680
              +       + +VD+  + G ++ AL + + +  + + S W  L+
Sbjct: 248 KKLLESDIYVGTALVDMYAKCGCIETALEVFENLSRRNVFS-WAVLI 293


>ref|XP_004233685.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g28640-like [Solanum lycopersicum]
          Length = 487

 Score =  338 bits (866), Expect = 5e-90
 Identities = 177/328 (53%), Positives = 212/328 (64%)
 Frame = +3

Query: 3    RKVFDEIPQRDAVQWNVMIDGCVQFGLPSEGLNVFRRMLVVSDVEPDEFCVATGLTACAH 182
            RKVFDEI   D +Q NV++ G +Q GL  E L++F+ ML    V PDE+CV T L ACA 
Sbjct: 153  RKVFDEITDIDVIQCNVLMSGHLQSGLAKEALSIFQDMLG-RGVGPDEYCVTTALGACAQ 211

Query: 183  SGALQQGMWIHEYVKKRDGLRRDVFVGTALVDMYAKCGCIDNAVEVFEEMPKRNVFSWSA 362
             GAL+QG WIHE+V K + L  DVF+G+ALVDMYAKCG I+ A EVFE MP RN  SW+ 
Sbjct: 212  LGALEQGKWIHEHVTKSEWLEYDVFIGSALVDMYAKCGSINLASEVFESMPTRNKHSWAT 271

Query: 363  MIGAFALHGFARGAVCCLERMLREDGLRPDGVVILGVLTACTHXXXXXXXXXXXXNMEAL 542
            MI  FA+HG    A+ CLERM   DGL+PDGVVIL VL AC H             ME+L
Sbjct: 272  MIRGFAVHGRPELALSCLERMQVADGLKPDGVVILAVLAACAHSGLQKEGQGLLDEMESL 331

Query: 543  YSVVPKHEHYSCVVDLLCRAGRLDDALALIQRMPMKPLASVWGALLSACRIHXXXXXXXX 722
            Y V P+HEH+SCVVDLLCRAGRLDDAL LI+RMPMKP ASVWGALLS CR H        
Sbjct: 332  YGVTPEHEHFSCVVDLLCRAGRLDDALKLIRRMPMKPRASVWGALLSGCRNHNNVNLAEL 391

Query: 723  XXXXXXXXDHDNGSEEDGAYVQLSNIYLDANRVEDARTVRKMMGERGIKKTPGCXXXXXX 902
                    +  N +EED AYVQLSNIYL A + +DAR +R+ +G+RG++KTPG       
Sbjct: 392  AVKEILLVEDGNEAEEDSAYVQLSNIYLAARQCDDARRIRRRIGDRGLRKTPGYSAIEID 451

Query: 903  XXXXXXXXXDVVHLCRFEMGAVLDLLSL 986
                     DV H+C  ++  VLDL  L
Sbjct: 452  GMVNEFISGDVSHICLADIHKVLDLTYL 479



 Score = 71.2 bits (173), Expect = 1e-09
 Identities = 59/245 (24%), Positives = 100/245 (40%), Gaps = 14/245 (5%)
 Frame = +3

Query: 6   KVFDEIPQRDAVQWNVMIDGCVQFGLPSEGLNVFRRMLVVSDVE-PDEFCVATGLTACAH 182
           ++F ++   +A  +N +I        P   LN F  M+  S+   PD F     L ACA+
Sbjct: 50  RIFAQVQTPNAFLYNALIRAYSSSPQPQVSLNYFNLMVQTSNAAAPDSFTFPFLLIACAN 109

Query: 183 SGALQQGMWIHEYVKKRDGLRRDVFVGTALVDMYAKCGCIDNAVEVFEEMPKRNVFSWSA 362
                +G  IH ++ K      +  V TAL+  Y  C  +D+A +VF+E+   +V   + 
Sbjct: 110 GPLEVEGKQIHSWIIKNSFSASNAHVQTALIRFYTNCKALDDARKVFDEITDIDVIQCNV 169

Query: 363 MIGAFALHGFARGAVCCLERMLREDGLRPDGVVILGVLTACTHXXXXXXXXXXXXNMEAL 542
           ++      G A+ A+   + ML   G+ PD   +   L AC               + AL
Sbjct: 170 LMSGHLQSGLAKEALSIFQDMLGR-GVGPDEYCVTTALGACA-------------QLGAL 215

Query: 543 YSVVPKHEHY-------------SCVVDLLCRAGRLDDALALIQRMPMKPLASVWGALLS 683
                 HEH              S +VD+  + G ++ A  + + MP +   S W  ++ 
Sbjct: 216 EQGKWIHEHVTKSEWLEYDVFIGSALVDMYAKCGSINLASEVFESMPTRNKHS-WATMIR 274

Query: 684 ACRIH 698
              +H
Sbjct: 275 GFAVH 279


>ref|NP_001168258.1| hypothetical protein [Zea mays] gi|223947079|gb|ACN27623.1| unknown
            [Zea mays] gi|413942312|gb|AFW74961.1| hypothetical
            protein ZEAMMB73_025514 [Zea mays]
          Length = 506

 Score =  324 bits (830), Expect = 8e-86
 Identities = 166/350 (47%), Positives = 217/350 (62%), Gaps = 2/350 (0%)
 Frame = +3

Query: 3    RKVFDEIPQRDAVQWNVMIDGCVQFGLPSEGLNVFRRMLVVSDVEPDEFCVATGLTACAH 182
            R+VFDE+P+R+A+ ++++I    + G P+EGL+VFR ML    V PD   + T + ACA 
Sbjct: 160  RRVFDELPRREAIHYDLLIGSYARAGAPAEGLSVFRTMLDDDGVTPDAVVLTTAVAACAQ 219

Query: 183  SGALQQGMWIHEYVKKR-DGLRRDVFVGTALVDMYAKCGCIDNAVEVFEEMPKRNVFSWS 359
            +GAL  G W+H YV++   GL  D F+G+AL+ MYAKCGC++ AV VF+ MP+RN + W+
Sbjct: 220  AGALDLGAWVHRYVERAAPGLLADAFLGSALIGMYAKCGCLEEAVRVFDGMPERNAYVWA 279

Query: 360  AMIGAFALHGFARGAVCCLERMLREDGLRPDGVVILGVLTACTHXXXXXXXXXXXXNMEA 539
             M+GA A+HG A  AV CLERM REDG+RPDGV +LG L+AC H             M  
Sbjct: 280  TMVGALAVHGMAAEAVACLERMAREDGVRPDGVAVLGALSACAHAGDVEEGLRLLGEMRP 339

Query: 540  LYSVVPKHEHYSCVVDLLCRAGRLDDALALIQRMPMKPLASVWGALLSACRIHXXXXXXX 719
             Y VVP HEHYSC VD+LCR GRL+DA+ L++ MPM PLASVWG++L+ CR H       
Sbjct: 340  RYGVVPGHEHYSCAVDMLCRVGRLEDAVGLVKIMPMAPLASVWGSVLAGCRSH---GNVE 396

Query: 720  XXXXXXXXXDHDNGSEEDGAYVQLSNIYLDANRVEDARTVRKMMGERGIKKTPGCXXXXX 899
                     +   GS ++G YVQLSNIYLDANR +DAR VRK++G RGIKK P       
Sbjct: 397  LAEVAARELERLGGSADEGVYVQLSNIYLDANRKDDARRVRKLIGGRGIKKLPAYSALEV 456

Query: 900  XXXXXXXXXXDVVHLCRFEMGAVLDLLSLQMIDY-NSRRSNDLLALTEDM 1046
                      D  H  RFE+  VL LL+ QM    N   S +L+ +   M
Sbjct: 457  DGEVSSFVADDQAHPRRFEIWEVLRLLADQMAQKPNEEESVELICVLAGM 506



 Score = 60.5 bits (145), Expect = 2e-06
 Identities = 42/167 (25%), Positives = 76/167 (45%), Gaps = 1/167 (0%)
 Frame = +3

Query: 201 GMWIHEYVKKRDGLRRDVFVGTALVDMYAKCGCIDNAVEVFEEMPKRNVFSWSAMIGAFA 380
           G  +H  + +      D +V TAL+ +Y+     D A  VF+E+P+R    +  +IG++A
Sbjct: 125 GPQLHALLVRNALFPADHYVTTALLQLYSPRP--DLARRVFDELPRREAIHYDLLIGSYA 182

Query: 381 LHGFARGAVCCLERMLREDGLRPDGVVILGVLTACTHXXXXXXXXXXXXNME-ALYSVVP 557
             G     +     ML +DG+ PD VV+   + AC               +E A   ++ 
Sbjct: 183 RAGAPAEGLSVFRTMLDDDGVTPDAVVLTTAVAACAQAGALDLGAWVHRYVERAAPGLLA 242

Query: 558 KHEHYSCVVDLLCRAGRLDDALALIQRMPMKPLASVWGALLSACRIH 698
                S ++ +  + G L++A+ +   MP +  A VW  ++ A  +H
Sbjct: 243 DAFLGSALIGMYAKCGCLEEAVRVFDGMPERN-AYVWATMVGALAVH 288


>ref|XP_003559455.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g28640-like [Brachypodium distachyon]
          Length = 493

 Score =  316 bits (809), Expect = 2e-83
 Identities = 160/331 (48%), Positives = 207/331 (62%), Gaps = 1/331 (0%)
 Frame = +3

Query: 3    RKVFDEIPQRDAVQWNVMIDGCVQFGLPSEGLNVFRRMLVVSDVEPDEFCVATGLTACAH 182
            R+VFDE+P+R+A+ ++++I    + G+ SEGL +FR M +   V PD   + T + ACA 
Sbjct: 150  RRVFDELPRREAIHYDLVIGAYARAGMASEGLALFRAMFL-DGVAPDAVVLTTAIAACAQ 208

Query: 183  SGALQQGMWIHEYVKKR-DGLRRDVFVGTALVDMYAKCGCIDNAVEVFEEMPKRNVFSWS 359
            SG L+ G W+H YV++   GL  D FVG+ALV MYAKCGC+  AV+VFE MP+RN + W 
Sbjct: 209  SGMLECGEWVHRYVERSAPGLLADAFVGSALVSMYAKCGCLQEAVKVFEGMPERNEYVWG 268

Query: 360  AMIGAFALHGFARGAVCCLERMLREDGLRPDGVVILGVLTACTHXXXXXXXXXXXXNMEA 539
             M+GAFA+HG AR AV CLERM +EDG+RPDGV +LG L+AC H             M  
Sbjct: 269  TMVGAFAVHGMAREAVACLERMAKEDGVRPDGVAVLGALSACAHAGKVEDGLSLLKGMRQ 328

Query: 540  LYSVVPKHEHYSCVVDLLCRAGRLDDALALIQRMPMKPLASVWGALLSACRIHXXXXXXX 719
             Y V P HEHYSC VD+LCR GRL+DA+ LI  MPM PLASVWG+LL+ CR++       
Sbjct: 329  TYGVPPGHEHYSCTVDMLCRVGRLEDAVRLISTMPMTPLASVWGSLLAGCRMYGNVELAE 388

Query: 720  XXXXXXXXXDHDNGSEEDGAYVQLSNIYLDANRVEDARTVRKMMGERGIKKTPGCXXXXX 899
                            ++G YVQLSNIYLDANR +DAR +RK++G RG+KK   C     
Sbjct: 389  VAATELGKL---GAGADEGVYVQLSNIYLDANRKDDARRIRKLIGSRGLKKVAACSAVEV 445

Query: 900  XXXXXXXXXXDVVHLCRFEMGAVLDLLSLQM 992
                      D VH  RFE+  VL LL+ Q+
Sbjct: 446  DGEVSSFVADDQVHPRRFEIWDVLGLLADQI 476



 Score = 60.1 bits (144), Expect = 3e-06
 Identities = 50/189 (26%), Positives = 84/189 (44%), Gaps = 2/189 (1%)
 Frame = +3

Query: 138 PDEFCVATGLTACAHSGALQQ-GMWIHEYVKKRDGLRRDVFVGTALVDMYAKCGCIDNAV 314
           PD       L+A A S      G  +H  + K      D +V TAL+ ++A     + A 
Sbjct: 93  PDHLSFPFALSAAAASAVSPPPGPQLHALLVKNALFPSDHYVTTALLQLHAPRP--EEAR 150

Query: 315 EVFEEMPKRNVFSWSAMIGAFALHGFARGAVCCLERMLREDGLRPDGVVILGVLTACTHX 494
            VF+E+P+R    +  +IGA+A  G A   +  L R +  DG+ PD VV+   + AC   
Sbjct: 151 RVFDELPRREAIHYDLVIGAYARAGMASEGL-ALFRAMFLDGVAPDAVVLTTAIAACAQS 209

Query: 495 XXXXXXXXXXXNME-ALYSVVPKHEHYSCVVDLLCRAGRLDDALALIQRMPMKPLASVWG 671
                       +E +   ++      S +V +  + G L +A+ + + MP +    VWG
Sbjct: 210 GMLECGEWVHRYVERSAPGLLADAFVGSALVSMYAKCGCLQEAVKVFEGMPERN-EYVWG 268

Query: 672 ALLSACRIH 698
            ++ A  +H
Sbjct: 269 TMVGAFAVH 277


>ref|XP_002439151.1| hypothetical protein SORBIDRAFT_09g001360 [Sorghum bicolor]
            gi|190688727|gb|ACE86390.1| pentatricopeptide (PPR)
            repeat-containing protein [Sorghum bicolor]
            gi|241944436|gb|EES17581.1| hypothetical protein
            SORBIDRAFT_09g001360 [Sorghum bicolor]
          Length = 517

 Score =  314 bits (805), Expect = 6e-83
 Identities = 160/333 (48%), Positives = 208/333 (62%), Gaps = 3/333 (0%)
 Frame = +3

Query: 3    RKVFDEIPQRDAVQWNVMIDGCVQFGLPSEGLNVFRRMLVVSD--VEPDEFCVATGLTAC 176
            R+VFDE+P+R+A+ ++++I    + G P+EGL VFR M    D  V PD   + T + AC
Sbjct: 160  RRVFDELPRREAIHYDLLIGSYARAGAPTEGLAVFRAMFDDDDGVVVPDAVVLTTAVAAC 219

Query: 177  AHSGALQQGMWIHEYVKKR-DGLRRDVFVGTALVDMYAKCGCIDNAVEVFEEMPKRNVFS 353
            A +GAL  G W+H YV++   GL  D F+G+ALV MYAKCGC+D+AV VF+ MP+RN + 
Sbjct: 220  AQAGALDHGAWVHRYVERTAPGLLADAFLGSALVGMYAKCGCLDDAVRVFDGMPERNAYV 279

Query: 354  WSAMIGAFALHGFARGAVCCLERMLREDGLRPDGVVILGVLTACTHXXXXXXXXXXXXNM 533
            W  M+GA A+HG A  AV CL+RM  EDG+RPDGV +LG L+AC H             M
Sbjct: 280  WGTMVGALAVHGMAAEAVACLDRMAVEDGVRPDGVAVLGALSACAHAGNVEEGLCLLREM 339

Query: 534  EALYSVVPKHEHYSCVVDLLCRAGRLDDALALIQRMPMKPLASVWGALLSACRIHXXXXX 713
               Y VVP HEHYSC VD+LCR GRL+DA+ L++ MPM PLASVWG++L+ CR +     
Sbjct: 340  RPRYGVVPGHEHYSCAVDMLCRVGRLEDAVGLVETMPMAPLASVWGSVLAGCRSY---GN 396

Query: 714  XXXXXXXXXXXDHDNGSEEDGAYVQLSNIYLDANRVEDARTVRKMMGERGIKKTPGCXXX 893
                       +   G+ ++G YVQLSNIYLDANR +DAR VRK++G RGIKK P     
Sbjct: 397  VELAEVAVRELEKLGGTADEGVYVQLSNIYLDANRKDDARRVRKLIGSRGIKKVPAYSAV 456

Query: 894  XXXXXXXXXXXXDVVHLCRFEMGAVLDLLSLQM 992
                        D  H  RFE+  VL LL+ QM
Sbjct: 457  EVDGEVSSFVADDQAHPRRFEIWEVLRLLADQM 489


>gb|EMT01880.1| hypothetical protein F775_14784 [Aegilops tauschii]
          Length = 426

 Score =  312 bits (799), Expect = 3e-82
 Identities = 161/331 (48%), Positives = 205/331 (61%), Gaps = 1/331 (0%)
 Frame = +3

Query: 3    RKVFDEIPQRDAVQWNVMIDGCVQFGLPSEGLNVFRRMLVVSDVEPDEFCVATGLTACAH 182
            R+VFDE+P+R+A+ ++++I    + G+ +EGL +FR M V   V PD   + T + ACA 
Sbjct: 68   RRVFDELPRREAIHYDLVIGAYARAGMAAEGLALFRAMFV-DGVAPDAVVLTTAVAACAQ 126

Query: 183  SGALQQGMWIHEYVKKR-DGLRRDVFVGTALVDMYAKCGCIDNAVEVFEEMPKRNVFSWS 359
            SGAL+ G W+H YV+    GL  D FVG+ALV MYAKCGC+  AV VFE MP+RN + W 
Sbjct: 127  SGALECGEWVHRYVESNAPGLLADAFVGSALVSMYAKCGCLQEAVRVFEGMPERNEYVWG 186

Query: 360  AMIGAFALHGFARGAVCCLERMLREDGLRPDGVVILGVLTACTHXXXXXXXXXXXXNMEA 539
             M+GAFA+HG AR AV CLERM  EDG+RPDGV +LG L+AC H             M  
Sbjct: 187  TMVGAFAVHGMAREAVACLERMAGEDGVRPDGVAVLGALSACAHAGKVEDGLRLLKEMRR 246

Query: 540  LYSVVPKHEHYSCVVDLLCRAGRLDDALALIQRMPMKPLASVWGALLSACRIHXXXXXXX 719
             Y V P HEHYSC VD+LCR GRL+DA+ LI  MPM PLASVWG+LL+ CR++       
Sbjct: 247  RYGVTPGHEHYSCTVDMLCRVGRLEDAVGLIGTMPMTPLASVWGSLLAGCRMY---GNVK 303

Query: 720  XXXXXXXXXDHDNGSEEDGAYVQLSNIYLDANRVEDARTVRKMMGERGIKKTPGCXXXXX 899
                     +      ++G YVQLSNIYLDANR +DAR VRK++G RG+KK P       
Sbjct: 304  LAEVAAKELEKLGVGADEGVYVQLSNIYLDANRKDDARRVRKLIGSRGLKKVPAYSAVEV 363

Query: 900  XXXXXXXXXXDVVHLCRFEMGAVLDLLSLQM 992
                      D  H  RFE+  +L LL+ QM
Sbjct: 364  DGELSSFVADDQAHPRRFEIWDLLGLLADQM 394



 Score = 63.2 bits (152), Expect = 3e-07
 Identities = 66/252 (26%), Positives = 108/252 (42%), Gaps = 4/252 (1%)
 Frame = +3

Query: 138 PDEFCVATGLTACAHSG-ALQQGMWIHEYVKKRDGLRRDVFVGTALVDMYAKCGCIDNAV 314
           PD       L+A A +  A   G  +H  + K      D +V TAL+ ++A     D+A 
Sbjct: 11  PDHLSFPFALSAAAAAPVAPPPGPQLHALLVKNALFPSDHYVTTALLQLHAPRP--DDAR 68

Query: 315 EVFEEMPKRNVFSWSAMIGAFALHGFARGAVCCLERMLREDGLRPDGVVILGVLTACTHX 494
            VF+E+P+R    +  +IGA+A  G A   +  L R +  DG+ PD VV+   + AC   
Sbjct: 69  RVFDELPRREAIHYDLVIGAYARAGMAAEGL-ALFRAMFVDGVAPDAVVLTTAVAACAQS 127

Query: 495 XXXXXXXXXXXNMEA-LYSVVPKHEHYSCVVDLLCRAGRLDDALALIQRMPMKPLASVWG 671
                       +E+    ++      S +V +  + G L +A+ + + MP +    VWG
Sbjct: 128 GALECGEWVHRYVESNAPGLLADAFVGSALVSMYAKCGCLQEAVRVFEGMPERN-EYVWG 186

Query: 672 ALLSACRIHXXXXXXXXXXXXXXXXDHDNGSEEDG-AYVQLSNIYLDANRVEDA-RTVRK 845
            ++ A  +H                D   G   DG A +   +    A +VED  R +++
Sbjct: 187 TMVGAFAVHGMAREAVACLERMAGED---GVRPDGVAVLGALSACAHAGKVEDGLRLLKE 243

Query: 846 MMGERGIKKTPG 881
           M    G+  TPG
Sbjct: 244 MRRRYGV--TPG 253


>ref|XP_004981863.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g28640-like [Setaria italica]
          Length = 495

 Score =  311 bits (798), Expect = 4e-82
 Identities = 161/331 (48%), Positives = 204/331 (61%), Gaps = 1/331 (0%)
 Frame = +3

Query: 3    RKVFDEIPQRDAVQWNVMIDGCVQFGLPSEGLNVFRRMLVVSDVEPDEFCVATGLTACAH 182
            R+VFDE+P+R+A+ ++++I    + G+P+EGL VFR M     V PD   + T + ACA 
Sbjct: 155  RRVFDELPRREAIHYDLVIGAYARAGMPAEGLAVFRAMFE-DGVAPDAVVLTTAVAACAQ 213

Query: 183  SGALQQGMWIHEYVKKR-DGLRRDVFVGTALVDMYAKCGCIDNAVEVFEEMPKRNVFSWS 359
            +GAL  G W+H YV++   GL  D FVG+ALV MYAKCGC+D AV VF+ MP+RN + W 
Sbjct: 214  AGALDCGAWVHRYVERAAPGLLGDAFVGSALVSMYAKCGCLDEAVRVFDGMPERNEYVWG 273

Query: 360  AMIGAFALHGFARGAVCCLERMLREDGLRPDGVVILGVLTACTHXXXXXXXXXXXXNMEA 539
             M+GAFA+HG A  AV CLERM REDG+RPDGV +LG L+AC H             M  
Sbjct: 274  TMVGAFAVHGMAAEAVACLERMAREDGVRPDGVAVLGALSACAHAGKVDDGLRLLREMRG 333

Query: 540  LYSVVPKHEHYSCVVDLLCRAGRLDDALALIQRMPMKPLASVWGALLSACRIHXXXXXXX 719
             Y V P HEHYSC VD+LCR GRL+DA+ LI  MPM PL SVWG++L+ CR +       
Sbjct: 334  RYGVAPGHEHYSCTVDMLCRVGRLEDAVGLIGTMPMAPLESVWGSVLAGCRSY---GNVE 390

Query: 720  XXXXXXXXXDHDNGSEEDGAYVQLSNIYLDANRVEDARTVRKMMGERGIKKTPGCXXXXX 899
                     +   G+ ++G YVQLSNIYLDANR +DAR VRK++G RGIKK P       
Sbjct: 391  LAEVAARELEKLGGTADEGVYVQLSNIYLDANRKDDARRVRKLIGSRGIKKAPAYSAVEV 450

Query: 900  XXXXXXXXXXDVVHLCRFEMGAVLDLLSLQM 992
                      D  H   FE+  VL LL  QM
Sbjct: 451  DGEVSSFVADDQAHPRCFEIWEVLRLLVDQM 481



 Score = 63.2 bits (152), Expect = 3e-07
 Identities = 62/246 (25%), Positives = 100/246 (40%), Gaps = 3/246 (1%)
 Frame = +3

Query: 138 PDEFCVATGLTACAHSGALQQGMWIHEYVKKRDGLRRDVFVGTALVDMYAKCGCIDNAVE 317
           P     A  + A   S     G  +H  + +      D +V TAL+ +YA     + A  
Sbjct: 99  PFALSAAAAVDAPDSSSDAGAGAQLHALLVRNALFPVDHYVTTALLQLYAPRP--ELARR 156

Query: 318 VFEEMPKRNVFSWSAMIGAFALHGFARGAVCCLERMLREDGLRPDGVVILGVLTACTHXX 497
           VF+E+P+R    +  +IGA+A  G     +     M  EDG+ PD VV+   + AC    
Sbjct: 157 VFDELPRREAIHYDLVIGAYARAGMPAEGLAVFRAMF-EDGVAPDAVVLTTAVAACAQAG 215

Query: 498 XXXXXXXXXXNME-ALYSVVPKHEHYSCVVDLLCRAGRLDDALALIQRMPMKPLASVWGA 674
                      +E A   ++      S +V +  + G LD+A+ +   MP +    VWG 
Sbjct: 216 ALDCGAWVHRYVERAAPGLLGDAFVGSALVSMYAKCGCLDEAVRVFDGMPERN-EYVWGT 274

Query: 675 LLSACRIHXXXXXXXXXXXXXXXXDHDNGSEEDG-AYVQLSNIYLDANRVEDA-RTVRKM 848
           ++ A  +H                D   G   DG A +   +    A +V+D  R +R+M
Sbjct: 275 MVGAFAVHGMAAEAVACLERMARED---GVRPDGVAVLGALSACAHAGKVDDGLRLLREM 331

Query: 849 MGERGI 866
            G  G+
Sbjct: 332 RGRYGV 337


>gb|EMS68422.1| hypothetical protein TRIUR3_23855 [Triticum urartu]
          Length = 425

 Score =  309 bits (792), Expect = 2e-81
 Identities = 159/331 (48%), Positives = 204/331 (61%), Gaps = 1/331 (0%)
 Frame = +3

Query: 3    RKVFDEIPQRDAVQWNVMIDGCVQFGLPSEGLNVFRRMLVVSDVEPDEFCVATGLTACAH 182
            R+VFDE+P+R+A+ ++++I    + G+ +EGL +FR M     V PD   + T + ACA 
Sbjct: 68   RRVFDELPRREAIHYDLVIGAYARAGMAAEGLALFRAMFA-DGVAPDAVVLTTAIAACAQ 126

Query: 183  SGALQQGMWIHEYVKKR-DGLRRDVFVGTALVDMYAKCGCIDNAVEVFEEMPKRNVFSWS 359
            SGAL+ G W+H YV+    GL  D FVG+ALV MYAKCGC+  AV VFE MP+RN + W 
Sbjct: 127  SGALECGEWVHRYVESNAPGLLADAFVGSALVSMYAKCGCLQEAVRVFEGMPERNEYVWG 186

Query: 360  AMIGAFALHGFARGAVCCLERMLREDGLRPDGVVILGVLTACTHXXXXXXXXXXXXNMEA 539
             M+GAFA+HG AR AV CLERM  EDG+RPDGV +LG L+AC H             M  
Sbjct: 187  TMVGAFAVHGMAREAVACLERMAGEDGVRPDGVAVLGALSACAHAGKVEDGLRLLKEMRR 246

Query: 540  LYSVVPKHEHYSCVVDLLCRAGRLDDALALIQRMPMKPLASVWGALLSACRIHXXXXXXX 719
             Y V P HEH+SC VD+LCR GRL+DA+ LI  MPM PLASVWG+LL+ CR++       
Sbjct: 247  RYGVTPGHEHFSCTVDMLCRVGRLEDAVGLIGTMPMTPLASVWGSLLAGCRMY---GNVE 303

Query: 720  XXXXXXXXXDHDNGSEEDGAYVQLSNIYLDANRVEDARTVRKMMGERGIKKTPGCXXXXX 899
                     +      ++G YVQLSNIYLDANR +DAR VRK++G RG+KK P       
Sbjct: 304  LAEVAAKELEKLGMGADEGVYVQLSNIYLDANRKDDARRVRKLIGNRGLKKVPAYSAVEI 363

Query: 900  XXXXXXXXXXDVVHLCRFEMGAVLDLLSLQM 992
                      D  H  RFE+  +L LL+ QM
Sbjct: 364  DGELSSFVADDQAHPRRFEIWDLLGLLADQM 394



 Score = 63.5 bits (153), Expect = 3e-07
 Identities = 66/252 (26%), Positives = 108/252 (42%), Gaps = 4/252 (1%)
 Frame = +3

Query: 138 PDEFCVATGLTACAHSG-ALQQGMWIHEYVKKRDGLRRDVFVGTALVDMYAKCGCIDNAV 314
           PD       L+A A +  A   G  +H  + K      D +V TAL+ ++A     D+A 
Sbjct: 11  PDHLSFPFALSAAAVAPVAPPPGPQLHALLLKNALFPSDHYVTTALLQLHAPRP--DDAR 68

Query: 315 EVFEEMPKRNVFSWSAMIGAFALHGFARGAVCCLERMLREDGLRPDGVVILGVLTACTHX 494
            VF+E+P+R    +  +IGA+A  G A   +  L R +  DG+ PD VV+   + AC   
Sbjct: 69  RVFDELPRREAIHYDLVIGAYARAGMAAEGL-ALFRAMFADGVAPDAVVLTTAIAACAQS 127

Query: 495 XXXXXXXXXXXNMEA-LYSVVPKHEHYSCVVDLLCRAGRLDDALALIQRMPMKPLASVWG 671
                       +E+    ++      S +V +  + G L +A+ + + MP +    VWG
Sbjct: 128 GALECGEWVHRYVESNAPGLLADAFVGSALVSMYAKCGCLQEAVRVFEGMPERN-EYVWG 186

Query: 672 ALLSACRIHXXXXXXXXXXXXXXXXDHDNGSEEDG-AYVQLSNIYLDANRVEDA-RTVRK 845
            ++ A  +H                D   G   DG A +   +    A +VED  R +++
Sbjct: 187 TMVGAFAVHGMAREAVACLERMAGED---GVRPDGVAVLGALSACAHAGKVEDGLRLLKE 243

Query: 846 MMGERGIKKTPG 881
           M    G+  TPG
Sbjct: 244 MRRRYGV--TPG 253