BLASTX nr result
ID: Sinomenium21_contig00030974
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00030974
(440 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002277716.2| PREDICTED: zinc finger CCCH domain-containin... 87 2e-15
emb|CBI33870.3| unnamed protein product [Vitis vinifera] 75 7e-12
ref|XP_004241444.1| PREDICTED: zinc finger CCCH domain-containin... 69 5e-10
ref|XP_006347340.1| PREDICTED: zinc finger CCCH domain-containin... 69 7e-10
ref|XP_006837406.1| hypothetical protein AMTR_s00111p00144160 [A... 67 2e-09
ref|XP_006347596.1| PREDICTED: zinc finger CCCH domain-containin... 65 1e-08
gb|EYU35090.1| hypothetical protein MIMGU_mgv1a008557mg [Mimulus... 63 4e-08
ref|XP_004167357.1| PREDICTED: zinc finger CCCH domain-containin... 62 8e-08
ref|XP_004136190.1| PREDICTED: zinc finger CCCH domain-containin... 62 8e-08
ref|XP_004300410.1| PREDICTED: zinc finger CCCH domain-containin... 59 5e-07
ref|XP_007209313.1| hypothetical protein PRUPE_ppa008182mg [Prun... 59 5e-07
gb|EXB64915.1| Zinc finger CCCH domain-containing protein 56 [Mo... 59 9e-07
ref|XP_003516789.1| PREDICTED: zinc finger CCCH domain-containin... 58 1e-06
ref|XP_002527651.1| nucleic acid binding protein, putative [Rici... 57 3e-06
>ref|XP_002277716.2| PREDICTED: zinc finger CCCH domain-containing protein 12-like
[Vitis vinifera]
Length = 372
Score = 87.4 bits (215), Expect = 2e-15
Identities = 41/59 (69%), Positives = 45/59 (76%), Gaps = 7/59 (11%)
Frame = +2
Query: 284 GYSDNWIPGLNDQAIWATEDDYGAWNGDGSADTP-NSSYDGRQ------SEPPNKKSRN 439
G DNWIPG +DQ +WATEDDY WNGDGS DTP NS+Y+GRQ SEPPNKKSRN
Sbjct: 15 GGVDNWIPGSSDQLVWATEDDYAVWNGDGSGDTPSNSNYEGRQSQSRSGSEPPNKKSRN 73
>emb|CBI33870.3| unnamed protein product [Vitis vinifera]
Length = 285
Score = 75.5 bits (184), Expect = 7e-12
Identities = 32/45 (71%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Frame = +2
Query: 284 GYSDNWIPGLNDQAIWATEDDYGAWNGDGSADTP-NSSYDGRQSE 415
G DNWIPG +DQ +WATEDDY WNGDGS DTP NS+Y+GRQS+
Sbjct: 15 GGVDNWIPGSSDQLVWATEDDYAVWNGDGSGDTPSNSNYEGRQSQ 59
>ref|XP_004241444.1| PREDICTED: zinc finger CCCH domain-containing protein 56-like
[Solanum lycopersicum]
Length = 357
Score = 69.3 bits (168), Expect = 5e-10
Identities = 36/59 (61%), Positives = 40/59 (67%), Gaps = 7/59 (11%)
Frame = +2
Query: 284 GYSDNWIPGLNDQAIWATEDDYGAWNGDGSADTP-NSSYDGRQ------SEPPNKKSRN 439
GY D+W P +DQA+WATEDDY AWN +TP NSS DGR SEPPNKKSRN
Sbjct: 24 GY-DSWGPNFSDQAVWATEDDYKAWNSGPYCETPSNSSQDGRHSQNRSGSEPPNKKSRN 81
>ref|XP_006347340.1| PREDICTED: zinc finger CCCH domain-containing protein 56-like
[Solanum tuberosum]
Length = 357
Score = 68.9 bits (167), Expect = 7e-10
Identities = 37/63 (58%), Positives = 41/63 (65%), Gaps = 7/63 (11%)
Frame = +2
Query: 272 AQDSGYSDNWIPGLNDQAIWATEDDYGAWNGDGSADTP-NSSYDGRQ------SEPPNKK 430
A GY D+W P +DQA+WATEDDY AWN +TP NSS DGR SEPPNKK
Sbjct: 20 AGGGGY-DSWGPNFSDQAVWATEDDYKAWNTGPFCETPSNSSQDGRHSQNRSGSEPPNKK 78
Query: 431 SRN 439
SRN
Sbjct: 79 SRN 81
>ref|XP_006837406.1| hypothetical protein AMTR_s00111p00144160 [Amborella trichopoda]
gi|548840024|gb|ERN00260.1| hypothetical protein
AMTR_s00111p00144160 [Amborella trichopoda]
Length = 372
Score = 67.4 bits (163), Expect = 2e-09
Identities = 32/51 (62%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Frame = +2
Query: 290 SDNWIPGLNDQAIWATEDDYGAWNGD-GSADTPNSSYDGRQSEPPNKKSRN 439
SD WIPG+NDQ IWAT+DDYGAWNGD + PN SEPP K+SRN
Sbjct: 24 SDCWIPGVNDQGIWATDDDYGAWNGDQDTISNPNF------SEPPQKRSRN 68
>ref|XP_006347596.1| PREDICTED: zinc finger CCCH domain-containing protein 56-like
[Solanum tuberosum]
Length = 349
Score = 64.7 bits (156), Expect = 1e-08
Identities = 34/60 (56%), Positives = 41/60 (68%), Gaps = 7/60 (11%)
Frame = +2
Query: 281 SGYSDNWIPGLNDQAIWATEDDYGAWNGDGSADTP-NSSYDGR------QSEPPNKKSRN 439
SG+ DNW G DQ +WATEDDY AWN S++TP NS+ DGR +SEPP+KK RN
Sbjct: 16 SGF-DNWGSGFPDQEVWATEDDYRAWNAGLSSETPSNSNQDGRHSLDRSESEPPHKKLRN 74
>gb|EYU35090.1| hypothetical protein MIMGU_mgv1a008557mg [Mimulus guttatus]
Length = 369
Score = 63.2 bits (152), Expect = 4e-08
Identities = 29/55 (52%), Positives = 37/55 (67%), Gaps = 6/55 (10%)
Frame = +2
Query: 293 DNWIPGLNDQAIWATEDDYGAWNGDGSADTPNSSYDGR------QSEPPNKKSRN 439
+NW NDQA+WATEDDYG WN + S D +++Y+ R SEPPNK+SRN
Sbjct: 28 ENWGSASNDQAVWATEDDYGMWNNEISMDLDSNNYEIRVSQSRSGSEPPNKRSRN 82
>ref|XP_004167357.1| PREDICTED: zinc finger CCCH domain-containing protein 12-like
[Cucumis sativus]
Length = 350
Score = 62.0 bits (149), Expect = 8e-08
Identities = 36/59 (61%), Positives = 41/59 (69%), Gaps = 9/59 (15%)
Frame = +2
Query: 290 SDNWIPGLNDQAIWATEDDYGAWN--GDGSADTP-NSSYDGRQ------SEPPNKKSRN 439
++NW PG +WATED+Y AWN GDGS DTP NSSYD RQ SEPPNKKSR+
Sbjct: 17 NENW-PG----EVWATEDEYRAWNNGGDGSVDTPSNSSYDQRQSQSRSGSEPPNKKSRS 70
>ref|XP_004136190.1| PREDICTED: zinc finger CCCH domain-containing protein 12-like
[Cucumis sativus]
Length = 339
Score = 62.0 bits (149), Expect = 8e-08
Identities = 36/59 (61%), Positives = 41/59 (69%), Gaps = 9/59 (15%)
Frame = +2
Query: 290 SDNWIPGLNDQAIWATEDDYGAWN--GDGSADTP-NSSYDGRQ------SEPPNKKSRN 439
++NW PG +WATED+Y AWN GDGS DTP NSSYD RQ SEPPNKKSR+
Sbjct: 17 NENW-PG----EVWATEDEYRAWNNGGDGSVDTPSNSSYDQRQSQSRSGSEPPNKKSRS 70
>ref|XP_004300410.1| PREDICTED: zinc finger CCCH domain-containing protein 56-like
[Fragaria vesca subsp. vesca]
Length = 346
Score = 59.3 bits (142), Expect = 5e-07
Identities = 34/62 (54%), Positives = 38/62 (61%), Gaps = 8/62 (12%)
Frame = +2
Query: 278 DSGYSDNWIPGLNDQAIWATEDDYGAW-NGDGSADT-PNSSYDGRQ------SEPPNKKS 433
+ G D W DQA+WATED+Y W NGD DT NS+YD RQ SEPPNKKS
Sbjct: 17 NGGGGDMWS---GDQAVWATEDEYQVWNNGDAMGDTMSNSNYDQRQSQSRSGSEPPNKKS 73
Query: 434 RN 439
RN
Sbjct: 74 RN 75
>ref|XP_007209313.1| hypothetical protein PRUPE_ppa008182mg [Prunus persica]
gi|462405048|gb|EMJ10512.1| hypothetical protein
PRUPE_ppa008182mg [Prunus persica]
Length = 342
Score = 59.3 bits (142), Expect = 5e-07
Identities = 32/49 (65%), Positives = 35/49 (71%), Gaps = 8/49 (16%)
Frame = +2
Query: 317 DQAIWATEDDYGAW-NGDGSADT-PNSSYDGRQ------SEPPNKKSRN 439
DQA+WATED+Y W NGD ADT NS+YD RQ SEPPNKKSRN
Sbjct: 26 DQAVWATEDEYRVWNNGDALADTMSNSNYDQRQSQSRSGSEPPNKKSRN 74
>gb|EXB64915.1| Zinc finger CCCH domain-containing protein 56 [Morus notabilis]
Length = 361
Score = 58.5 bits (140), Expect = 9e-07
Identities = 33/58 (56%), Positives = 40/58 (68%), Gaps = 8/58 (13%)
Frame = +2
Query: 290 SDNWIPGLNDQAIWATEDDYGAW-NGDGSADT-PNSSYDGRQ------SEPPNKKSRN 439
S+NW +DQA+WATEDDY AW N + S DT NS++D RQ SEPPNKKS+N
Sbjct: 17 SENWS---SDQAVWATEDDYRAWNNSEFSGDTFTNSNFDQRQSQSRSGSEPPNKKSKN 71
>ref|XP_003516789.1| PREDICTED: zinc finger CCCH domain-containing protein 12-like
isoform X1 [Glycine max]
gi|571434461|ref|XP_006573203.1| PREDICTED: zinc finger
CCCH domain-containing protein 12-like isoform X2
[Glycine max]
Length = 368
Score = 58.2 bits (139), Expect = 1e-06
Identities = 29/57 (50%), Positives = 35/57 (61%), Gaps = 5/57 (8%)
Frame = +2
Query: 284 GYSDNWIPGLNDQAIWATEDDYGAWN-----GDGSADTPNSSYDGRQSEPPNKKSRN 439
G ++W DQA WATED+Y WN GD NS+Y+GR SEPP+KKSRN
Sbjct: 21 GGGESWS---GDQADWATEDEYRFWNNNNSGGDSETTPSNSNYEGRSSEPPSKKSRN 74
>ref|XP_002527651.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223532956|gb|EEF34722.1| nucleic acid binding
protein, putative [Ricinus communis]
Length = 349
Score = 56.6 bits (135), Expect = 3e-06
Identities = 32/54 (59%), Positives = 36/54 (66%), Gaps = 5/54 (9%)
Frame = +2
Query: 293 DNWIPGLNDQAI-WATEDDYGAW-NGDGSAD-TP-NSSYDGRQ-SEPPNKKSRN 439
DNW+P D + WATEDDY W N DG D TP NSS+ R SEPPNKKS+N
Sbjct: 18 DNWLPNSADSGVVWATEDDYQMWNNSDGPNDNTPSNSSFQSRSGSEPPNKKSKN 71