BLASTX nr result
ID: Sinomenium21_contig00030889
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00030889
(463 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004301807.1| PREDICTED: pentatricopeptide repeat-containi... 116 3e-24
ref|XP_002515292.1| pentatricopeptide repeat-containing protein,... 115 5e-24
ref|XP_007148015.1| hypothetical protein PHAVU_006G173400g [Phas... 115 8e-24
emb|CBI20034.3| unnamed protein product [Vitis vinifera] 114 2e-23
ref|XP_002268129.1| PREDICTED: pentatricopeptide repeat-containi... 114 2e-23
emb|CAN78368.1| hypothetical protein VITISV_028672 [Vitis vinifera] 114 2e-23
ref|XP_006595405.1| PREDICTED: pentatricopeptide repeat-containi... 113 3e-23
ref|XP_006492325.1| PREDICTED: pentatricopeptide repeat-containi... 113 3e-23
ref|XP_002878464.1| pentatricopeptide repeat-containing protein ... 112 5e-23
ref|XP_006347731.1| PREDICTED: pentatricopeptide repeat-containi... 112 7e-23
ref|XP_006402372.1| hypothetical protein EUTSA_v10005842mg [Eutr... 112 7e-23
ref|XP_004230081.1| PREDICTED: pentatricopeptide repeat-containi... 112 7e-23
ref|NP_191806.1| pentatricopeptide repeat-containing protein [Ar... 111 9e-23
ref|NP_191813.1| pentatricopeptide repeat-containing protein [Ar... 111 9e-23
ref|NP_196986.1| pentatricopeptide repeat-containing protein [Ar... 111 9e-23
ref|XP_006444484.1| hypothetical protein CICLE_v10019225mg [Citr... 111 1e-22
ref|XP_002320305.2| hypothetical protein POPTR_0014s11650g, part... 110 2e-22
ref|XP_007014405.1| Pentatricopeptide repeat (PPR) superfamily p... 109 3e-22
ref|XP_004486276.1| PREDICTED: pentatricopeptide repeat-containi... 108 8e-22
gb|EXB53232.1| hypothetical protein L484_007175 [Morus notabilis] 105 7e-21
>ref|XP_004301807.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 646
Score = 116 bits (291), Expect = 3e-24
Identities = 53/71 (74%), Positives = 61/71 (85%)
Frame = -2
Query: 213 VGSAADPSEVERVCKVIDELFVSDRNMESVLDQCEIELSRDLVVAVLDRFRHARKPAFRF 34
V S+ADP EV+RVCKVIDELF DRNME+VLD+C +ELS DLVV VL RF HARKPAFRF
Sbjct: 150 VSSSADPEEVDRVCKVIDELFALDRNMEAVLDECGVELSHDLVVDVLKRFHHARKPAFRF 209
Query: 33 FCWAGQREGFE 1
FCWAG++ GF+
Sbjct: 210 FCWAGEKPGFQ 220
>ref|XP_002515292.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223545772|gb|EEF47276.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 533
Score = 115 bits (289), Expect = 5e-24
Identities = 52/71 (73%), Positives = 62/71 (87%)
Frame = -2
Query: 213 VGSAADPSEVERVCKVIDELFVSDRNMESVLDQCEIELSRDLVVAVLDRFRHARKPAFRF 34
+ S+ADP EV+RVCKVIDELF DRNME+VLD+C I LS DLV+ VL+RF HARKPAFRF
Sbjct: 56 INSSADPVEVDRVCKVIDELFALDRNMEAVLDECGINLSHDLVIDVLERFCHARKPAFRF 115
Query: 33 FCWAGQREGFE 1
FCWAG+++GFE
Sbjct: 116 FCWAGEKQGFE 126
>ref|XP_007148015.1| hypothetical protein PHAVU_006G173400g [Phaseolus vulgaris]
gi|561021238|gb|ESW20009.1| hypothetical protein
PHAVU_006G173400g [Phaseolus vulgaris]
Length = 638
Score = 115 bits (287), Expect = 8e-24
Identities = 52/68 (76%), Positives = 59/68 (86%)
Frame = -2
Query: 207 SAADPSEVERVCKVIDELFVSDRNMESVLDQCEIELSRDLVVAVLDRFRHARKPAFRFFC 28
S ADP EV+RVCKVIDELF DRNME+VLD+C ++LS DLVV VL RF+HARKPAFRFFC
Sbjct: 157 SCADPDEVDRVCKVIDELFALDRNMEAVLDECGVQLSHDLVVEVLQRFKHARKPAFRFFC 216
Query: 27 WAGQREGF 4
WAG+R GF
Sbjct: 217 WAGKRPGF 224
>emb|CBI20034.3| unnamed protein product [Vitis vinifera]
Length = 596
Score = 114 bits (284), Expect = 2e-23
Identities = 51/70 (72%), Positives = 59/70 (84%)
Frame = -2
Query: 213 VGSAADPSEVERVCKVIDELFVSDRNMESVLDQCEIELSRDLVVAVLDRFRHARKPAFRF 34
V S ADP EV RVC+VIDELF DRNME+VLD+C ++LS LVV VL+RF+HARKPAFRF
Sbjct: 151 VNSGADPEEVSRVCRVIDELFALDRNMEAVLDECNVDLSHALVVGVLERFKHARKPAFRF 210
Query: 33 FCWAGQREGF 4
FCWAGQ+ GF
Sbjct: 211 FCWAGQKAGF 220
>ref|XP_002268129.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Vitis vinifera]
Length = 679
Score = 114 bits (284), Expect = 2e-23
Identities = 51/70 (72%), Positives = 59/70 (84%)
Frame = -2
Query: 213 VGSAADPSEVERVCKVIDELFVSDRNMESVLDQCEIELSRDLVVAVLDRFRHARKPAFRF 34
V S ADP EV RVC+VIDELF DRNME+VLD+C ++LS LVV VL+RF+HARKPAFRF
Sbjct: 196 VNSGADPEEVSRVCRVIDELFALDRNMEAVLDECNVDLSHALVVGVLERFKHARKPAFRF 255
Query: 33 FCWAGQREGF 4
FCWAGQ+ GF
Sbjct: 256 FCWAGQKAGF 265
>emb|CAN78368.1| hypothetical protein VITISV_028672 [Vitis vinifera]
Length = 927
Score = 114 bits (284), Expect = 2e-23
Identities = 51/70 (72%), Positives = 59/70 (84%)
Frame = -2
Query: 213 VGSAADPSEVERVCKVIDELFVSDRNMESVLDQCEIELSRDLVVAVLDRFRHARKPAFRF 34
V S ADP EV RVC+VIDELF DRNME+VLD+C ++LS LVV VL+RF+HARKPAFRF
Sbjct: 196 VNSGADPEEVSRVCRVIDELFALDRNMEAVLDECNVDLSHALVVGVLERFKHARKPAFRF 255
Query: 33 FCWAGQREGF 4
FCWAGQ+ GF
Sbjct: 256 FCWAGQKAGF 265
>ref|XP_006595405.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14820,
mitochondrial-like [Glycine max]
Length = 593
Score = 113 bits (282), Expect = 3e-23
Identities = 53/68 (77%), Positives = 57/68 (83%)
Frame = -2
Query: 207 SAADPSEVERVCKVIDELFVSDRNMESVLDQCEIELSRDLVVAVLDRFRHARKPAFRFFC 28
S ADP EVERVCKVIDELF DRNME VLD+C + LS DLVV VL RF+HARKPAFRFFC
Sbjct: 112 SCADPVEVERVCKVIDELFALDRNMEVVLDECGVRLSHDLVVDVLQRFKHARKPAFRFFC 171
Query: 27 WAGQREGF 4
WAG+R GF
Sbjct: 172 WAGKRPGF 179
>ref|XP_006492325.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Citrus sinensis]
Length = 651
Score = 113 bits (282), Expect = 3e-23
Identities = 52/68 (76%), Positives = 58/68 (85%)
Frame = -2
Query: 207 SAADPSEVERVCKVIDELFVSDRNMESVLDQCEIELSRDLVVAVLDRFRHARKPAFRFFC 28
S ADP E+ERVCKVIDELF DRNME+VLD+C I LS DLVV VL+RFRHAR+PAFRFFC
Sbjct: 174 STADPREIERVCKVIDELFSLDRNMEAVLDECGINLSHDLVVYVLERFRHARRPAFRFFC 233
Query: 27 WAGQREGF 4
WAG + GF
Sbjct: 234 WAGDKPGF 241
>ref|XP_002878464.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297324302|gb|EFH54723.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 628
Score = 112 bits (280), Expect = 5e-23
Identities = 50/70 (71%), Positives = 61/70 (87%)
Frame = -2
Query: 213 VGSAADPSEVERVCKVIDELFVSDRNMESVLDQCEIELSRDLVVAVLDRFRHARKPAFRF 34
V S+ +P EVERVCKVIDELF DRNME+VLD+ ++ELS DL+V VL+RFRHARKPAFRF
Sbjct: 131 VDSSTNPEEVERVCKVIDELFALDRNMEAVLDEMKVELSHDLIVKVLERFRHARKPAFRF 190
Query: 33 FCWAGQREGF 4
FCWA +++GF
Sbjct: 191 FCWAAEKQGF 200
>ref|XP_006347731.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Solanum tuberosum]
Length = 687
Score = 112 bits (279), Expect = 7e-23
Identities = 52/68 (76%), Positives = 58/68 (85%)
Frame = -2
Query: 207 SAADPSEVERVCKVIDELFVSDRNMESVLDQCEIELSRDLVVAVLDRFRHARKPAFRFFC 28
S ADP EV+RVCKVIDELF DRNME+VLD+C I LS DLVV VL+RF+HARKPAFRFFC
Sbjct: 213 SKADPKEVDRVCKVIDELFSLDRNMEAVLDECGINLSHDLVVDVLERFKHARKPAFRFFC 272
Query: 27 WAGQREGF 4
WA QR G+
Sbjct: 273 WAAQRPGY 280
>ref|XP_006402372.1| hypothetical protein EUTSA_v10005842mg [Eutrema salsugineum]
gi|557103471|gb|ESQ43825.1| hypothetical protein
EUTSA_v10005842mg [Eutrema salsugineum]
Length = 611
Score = 112 bits (279), Expect = 7e-23
Identities = 50/70 (71%), Positives = 61/70 (87%)
Frame = -2
Query: 213 VGSAADPSEVERVCKVIDELFVSDRNMESVLDQCEIELSRDLVVAVLDRFRHARKPAFRF 34
VGS+ +P EVERVCKVIDELF DRNME+VLD+ +++LS DL+V VL+RFRHARKPAFRF
Sbjct: 134 VGSSTNPEEVERVCKVIDELFALDRNMEAVLDEMKVDLSHDLMVEVLERFRHARKPAFRF 193
Query: 33 FCWAGQREGF 4
FCWA ++ GF
Sbjct: 194 FCWAAEKPGF 203
>ref|XP_004230081.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Solanum lycopersicum]
Length = 691
Score = 112 bits (279), Expect = 7e-23
Identities = 53/70 (75%), Positives = 58/70 (82%)
Frame = -2
Query: 213 VGSAADPSEVERVCKVIDELFVSDRNMESVLDQCEIELSRDLVVAVLDRFRHARKPAFRF 34
V S ADP EVERVCKVIDELF DRNME+VLD+C I LS DLVV VL+RF+HARKPAFRF
Sbjct: 215 VESKADPKEVERVCKVIDELFSLDRNMEAVLDECGINLSHDLVVDVLERFKHARKPAFRF 274
Query: 33 FCWAGQREGF 4
FCWA R G+
Sbjct: 275 FCWAAMRPGY 284
>ref|NP_191806.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181319|sp|Q9LZP3.1|PP293_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g62470, mitochondrial; Flags: Precursor
gi|7340718|emb|CAB82961.1| putative protein [Arabidopsis
thaliana] gi|34365579|gb|AAQ65101.1| At3g62470
[Arabidopsis thaliana] gi|332646835|gb|AEE80356.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 599
Score = 111 bits (278), Expect = 9e-23
Identities = 50/70 (71%), Positives = 61/70 (87%)
Frame = -2
Query: 213 VGSAADPSEVERVCKVIDELFVSDRNMESVLDQCEIELSRDLVVAVLDRFRHARKPAFRF 34
V S+ +P EVERVCKVIDELF DRNME+VLD+ +++LS DL+V VL+RFRHARKPAFRF
Sbjct: 122 VESSTNPEEVERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRF 181
Query: 33 FCWAGQREGF 4
FCWA +R+GF
Sbjct: 182 FCWAAERQGF 191
>ref|NP_191813.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122214682|sp|Q3EAF8.1|PP294_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g62540, mitochondrial; Flags: Precursor
gi|332646841|gb|AEE80362.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 599
Score = 111 bits (278), Expect = 9e-23
Identities = 50/70 (71%), Positives = 61/70 (87%)
Frame = -2
Query: 213 VGSAADPSEVERVCKVIDELFVSDRNMESVLDQCEIELSRDLVVAVLDRFRHARKPAFRF 34
V S+ +P EVERVCKVIDELF DRNME+VLD+ +++LS DL+V VL+RFRHARKPAFRF
Sbjct: 122 VESSTNPEEVERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRF 181
Query: 33 FCWAGQREGF 4
FCWA +R+GF
Sbjct: 182 FCWAAERQGF 191
>ref|NP_196986.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75173968|sp|Q9LEQ7.1|PP382_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g14820, mitochondrial; Flags: Precursor
gi|9755750|emb|CAC01881.1| putative protein [Arabidopsis
thaliana] gi|332004697|gb|AED92080.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 598
Score = 111 bits (278), Expect = 9e-23
Identities = 50/70 (71%), Positives = 61/70 (87%)
Frame = -2
Query: 213 VGSAADPSEVERVCKVIDELFVSDRNMESVLDQCEIELSRDLVVAVLDRFRHARKPAFRF 34
V S+ +P EVERVCKVIDELF DRNME+VLD+ +++LS DL+V VL+RFRHARKPAFRF
Sbjct: 121 VESSTNPEEVERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRF 180
Query: 33 FCWAGQREGF 4
FCWA +R+GF
Sbjct: 181 FCWAAERQGF 190
>ref|XP_006444484.1| hypothetical protein CICLE_v10019225mg [Citrus clementina]
gi|557546746|gb|ESR57724.1| hypothetical protein
CICLE_v10019225mg [Citrus clementina]
Length = 653
Score = 111 bits (277), Expect = 1e-22
Identities = 51/68 (75%), Positives = 58/68 (85%)
Frame = -2
Query: 207 SAADPSEVERVCKVIDELFVSDRNMESVLDQCEIELSRDLVVAVLDRFRHARKPAFRFFC 28
S ADP E+ERVCKVIDELF DRNME+VLD+C I LS +LVV VL+RFRHAR+PAFRFFC
Sbjct: 176 STADPREIERVCKVIDELFSLDRNMEAVLDECGINLSHNLVVDVLERFRHARRPAFRFFC 235
Query: 27 WAGQREGF 4
WAG + GF
Sbjct: 236 WAGDKPGF 243
>ref|XP_002320305.2| hypothetical protein POPTR_0014s11650g, partial [Populus
trichocarpa] gi|550324008|gb|EEE98620.2| hypothetical
protein POPTR_0014s11650g, partial [Populus trichocarpa]
Length = 614
Score = 110 bits (275), Expect = 2e-22
Identities = 50/70 (71%), Positives = 58/70 (82%)
Frame = -2
Query: 213 VGSAADPSEVERVCKVIDELFVSDRNMESVLDQCEIELSRDLVVAVLDRFRHARKPAFRF 34
V S ADP+EV +VCKVIDELF D NME+VLD+C I LS DLV+ VL+RFRHARKPAFRF
Sbjct: 139 VKSTADPAEVHKVCKVIDELFALDHNMEAVLDECGINLSHDLVIEVLERFRHARKPAFRF 198
Query: 33 FCWAGQREGF 4
FCWA ++ GF
Sbjct: 199 FCWAAEKPGF 208
>ref|XP_007014405.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
[Theobroma cacao] gi|508784768|gb|EOY32024.1|
Pentatricopeptide repeat (PPR) superfamily protein,
putative [Theobroma cacao]
Length = 627
Score = 109 bits (273), Expect = 3e-22
Identities = 68/150 (45%), Positives = 81/150 (54%), Gaps = 1/150 (0%)
Frame = -2
Query: 447 HSNPHRCLNRFNGEXXXXXXXXXXXXXXQEKLRQSLIPLNHHFLNKDLSLGFGSRAFSRV 268
HS+P+ L R N + QEKL + I L + L+ F R FS
Sbjct: 71 HSSPYYSLRRVNCQIPFLLPHSSSLHYLQEKLLANSISLARNVLD------FNHRNFSSF 124
Query: 267 XXXXXXXXXXXXXXXXXSVG-SAADPSEVERVCKVIDELFVSDRNMESVLDQCEIELSRD 91
S ADP EVER+CKVIDELF DRNME+VLD+C I + D
Sbjct: 125 TDGDTDSEADHESDSSGDSSKSRADPKEVERICKVIDELFGLDRNMEAVLDECGINPTHD 184
Query: 90 LVVAVLDRFRHARKPAFRFFCWAGQREGFE 1
LV+ VL+RFRHARKPAFRFF WAGQ+ GFE
Sbjct: 185 LVMDVLERFRHARKPAFRFFRWAGQKPGFE 214
>ref|XP_004486276.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Cicer arietinum]
Length = 685
Score = 108 bits (270), Expect = 8e-22
Identities = 50/69 (72%), Positives = 56/69 (81%)
Frame = -2
Query: 207 SAADPSEVERVCKVIDELFVSDRNMESVLDQCEIELSRDLVVAVLDRFRHARKPAFRFFC 28
S AD EV RVCKVIDELF DRNME+VLD+C + LS D VV VL RF+HARKPAFRFFC
Sbjct: 204 SCADSDEVNRVCKVIDELFALDRNMEAVLDECGVMLSHDFVVDVLQRFKHARKPAFRFFC 263
Query: 27 WAGQREGFE 1
WAG+R GF+
Sbjct: 264 WAGKRPGFD 272
>gb|EXB53232.1| hypothetical protein L484_007175 [Morus notabilis]
Length = 567
Score = 105 bits (262), Expect = 7e-21
Identities = 50/70 (71%), Positives = 58/70 (82%)
Frame = -2
Query: 213 VGSAADPSEVERVCKVIDELFVSDRNMESVLDQCEIELSRDLVVAVLDRFRHARKPAFRF 34
VGS+ADP EV+RVCKV+DE+ V DRNME+VLD+C I LS DLVV VL+RFRHA KPAFRF
Sbjct: 84 VGSSADPKEVDRVCKVLDEMLVLDRNMEAVLDECGIHLSHDLVVDVLERFRHAWKPAFRF 143
Query: 33 FCWAGQREGF 4
F WAG + F
Sbjct: 144 FYWAGGKPEF 153