BLASTX nr result
ID: Sinomenium21_contig00030838
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00030838
(403 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002303926.2| hypothetical protein POPTR_0003s19630g [Popu... 148 7e-34
gb|EMT23234.1| DNA-directed RNA polymerase II subunit RPB1-B [Ae... 146 3e-33
ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E sub... 146 3e-33
ref|XP_006420718.1| hypothetical protein CICLE_v10004129mg [Citr... 146 3e-33
emb|CBI40152.3| unnamed protein product [Vitis vinifera] 145 4e-33
ref|XP_006470866.1| PREDICTED: DNA-directed RNA polymerase V sub... 144 1e-32
ref|XP_007218881.1| hypothetical protein PRUPE_ppa000088mg [Prun... 144 2e-32
ref|XP_004951807.1| PREDICTED: DNA-directed RNA polymerase E sub... 143 2e-32
ref|XP_004308588.1| PREDICTED: DNA-directed RNA polymerase E sub... 143 3e-32
ref|XP_003577164.1| PREDICTED: DNA-directed RNA polymerase E sub... 142 4e-32
ref|XP_002513060.1| DNA-directed RNA polymerase, putative [Ricin... 142 5e-32
gb|EEE56320.1| hypothetical protein OsJ_05410 [Oryza sativa Japo... 140 1e-31
gb|EEC72510.1| hypothetical protein OsI_05888 [Oryza sativa Indi... 140 1e-31
ref|NP_001045921.1| Os02g0152800 [Oryza sativa Japonica Group] g... 140 1e-31
ref|XP_004230024.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 140 2e-31
ref|XP_006646896.1| PREDICTED: DNA-directed RNA polymerase V sub... 140 2e-31
ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E sub... 139 4e-31
gb|EXB62675.1| DNA-directed RNA polymerase E subunit 1 [Morus no... 138 9e-31
ref|XP_006411250.1| hypothetical protein EUTSA_v10016128mg [Eutr... 137 1e-30
ref|XP_004511031.1| PREDICTED: DNA-directed RNA polymerase E sub... 137 2e-30
>ref|XP_002303926.2| hypothetical protein POPTR_0003s19630g [Populus trichocarpa]
gi|550343552|gb|EEE78905.2| hypothetical protein
POPTR_0003s19630g [Populus trichocarpa]
Length = 1920
Score = 148 bits (374), Expect = 7e-34
Identities = 66/110 (60%), Positives = 83/110 (75%)
Frame = +1
Query: 67 EDTRTDTADGRITSIRFSLVTDHEICRXXXXXXXXXXXXQLTNPFLGLPLESGKCESCGT 246
E++++ DG IT IRF L T EIC QLTNPFLGLPLE GKCESCGT
Sbjct: 3 ENSQSSIFDGEITGIRFGLATQKEICTASISDCPISHSSQLTNPFLGLPLEFGKCESCGT 62
Query: 247 AEPGKCDGHFGYIELPIPIFHPCHLSELRKLLSLVCLKCLRMKKGKIRDK 396
+EPGKC+GHFG+I LPIPI+HP H+SEL+++LSL+CLKCL++K+ KI+ K
Sbjct: 63 SEPGKCEGHFGFIHLPIPIYHPSHISELKRMLSLICLKCLKLKRNKIQIK 112
>gb|EMT23234.1| DNA-directed RNA polymerase II subunit RPB1-B [Aegilops tauschii]
Length = 2017
Score = 146 bits (369), Expect = 3e-33
Identities = 66/116 (56%), Positives = 84/116 (72%)
Frame = +1
Query: 52 ATPEMEDTRTDTADGRITSIRFSLVTDHEICRXXXXXXXXXXXXQLTNPFLGLPLESGKC 231
A E + + A+G I SI+ SL T+ EIC QL NPFLGLPLE+GKC
Sbjct: 44 AMEEEDQSAVLVAEGAIKSIKLSLSTEEEICTYSINDCPVTHPSQLGNPFLGLPLETGKC 103
Query: 232 ESCGTAEPGKCDGHFGYIELPIPIFHPCHLSELRKLLSLVCLKCLRMKKGKIRDKD 399
ESCG E GKC+GHFG+IELP+P++HPCH+SELR+LLS+VCL CLR+KKGK++ K+
Sbjct: 104 ESCGATENGKCEGHFGFIELPVPVYHPCHVSELRQLLSMVCLMCLRIKKGKVKQKN 159
>ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E subunit 1 [Vitis vinifera]
Length = 1830
Score = 146 bits (369), Expect = 3e-33
Identities = 66/113 (58%), Positives = 83/113 (73%)
Frame = +1
Query: 64 MEDTRTDTADGRITSIRFSLVTDHEICRXXXXXXXXXXXXQLTNPFLGLPLESGKCESCG 243
ME+ + DG I+ IRF L T EIC QLTNPFLGLPLE GKCESCG
Sbjct: 1 MEEDSSTILDGEISGIRFGLATRQEICIASVSDCPISHASQLTNPFLGLPLEFGKCESCG 60
Query: 244 TAEPGKCDGHFGYIELPIPIFHPCHLSELRKLLSLVCLKCLRMKKGKIRDKDV 402
TAEPG+C+GHFGYIELPIPI+HP H+SEL+++LSL+CLKCL+++K K+ + +
Sbjct: 61 TAEPGQCEGHFGYIELPIPIYHPGHVSELKRMLSLLCLKCLKIRKSKVTNNGI 113
>ref|XP_006420718.1| hypothetical protein CICLE_v10004129mg [Citrus clementina]
gi|557522591|gb|ESR33958.1| hypothetical protein
CICLE_v10004129mg [Citrus clementina]
Length = 1867
Score = 146 bits (368), Expect = 3e-33
Identities = 66/111 (59%), Positives = 82/111 (73%)
Frame = +1
Query: 67 EDTRTDTADGRITSIRFSLVTDHEICRXXXXXXXXXXXXQLTNPFLGLPLESGKCESCGT 246
E+T + +G+I IRF L T EIC QL NPFLGLPLE GKCESCGT
Sbjct: 3 ENTSSTILEGQIVGIRFGLATQKEICTASISDCSISHASQLANPFLGLPLEFGKCESCGT 62
Query: 247 AEPGKCDGHFGYIELPIPIFHPCHLSELRKLLSLVCLKCLRMKKGKIRDKD 399
+EPGKC+GHFGYIELPIPI+HP H+SEL+++LSL+CLKCL+MK K++ K+
Sbjct: 63 SEPGKCEGHFGYIELPIPIYHPSHISELKRMLSLLCLKCLKMKSTKLQIKN 113
>emb|CBI40152.3| unnamed protein product [Vitis vinifera]
Length = 1890
Score = 145 bits (367), Expect = 4e-33
Identities = 66/108 (61%), Positives = 81/108 (75%)
Frame = +1
Query: 64 MEDTRTDTADGRITSIRFSLVTDHEICRXXXXXXXXXXXXQLTNPFLGLPLESGKCESCG 243
ME+ + DG I+ IRF L T EIC QLTNPFLGLPLE GKCESCG
Sbjct: 1 MEEDSSTILDGEISGIRFGLATRQEICIASVSDCPISHASQLTNPFLGLPLEFGKCESCG 60
Query: 244 TAEPGKCDGHFGYIELPIPIFHPCHLSELRKLLSLVCLKCLRMKKGKI 387
TAEPG+C+GHFGYIELPIPI+HP H+SEL+++LSL+CLKCL+++K K+
Sbjct: 61 TAEPGQCEGHFGYIELPIPIYHPGHVSELKRMLSLLCLKCLKIRKSKV 108
>ref|XP_006470866.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Citrus
sinensis]
Length = 1865
Score = 144 bits (363), Expect = 1e-32
Identities = 66/111 (59%), Positives = 80/111 (72%)
Frame = +1
Query: 67 EDTRTDTADGRITSIRFSLVTDHEICRXXXXXXXXXXXXQLTNPFLGLPLESGKCESCGT 246
E+T + +G+I IRF L T EIC QL NPFLGLPLE GKCESCGT
Sbjct: 3 ENTSSTILEGQIVGIRFGLATQKEICTASISDCSISHASQLANPFLGLPLEFGKCESCGT 62
Query: 247 AEPGKCDGHFGYIELPIPIFHPCHLSELRKLLSLVCLKCLRMKKGKIRDKD 399
+EPGKC+GHFGYIELPIPI+HP H+SEL+ +LSL+CLKCL+MK K + K+
Sbjct: 63 SEPGKCEGHFGYIELPIPIYHPSHISELKHMLSLLCLKCLKMKSTKFQIKN 113
>ref|XP_007218881.1| hypothetical protein PRUPE_ppa000088mg [Prunus persica]
gi|462415343|gb|EMJ20080.1| hypothetical protein
PRUPE_ppa000088mg [Prunus persica]
Length = 1855
Score = 144 bits (362), Expect = 2e-32
Identities = 68/113 (60%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Frame = +1
Query: 64 MEDTRTDTA-DGRITSIRFSLVTDHEICRXXXXXXXXXXXXQLTNPFLGLPLESGKCESC 240
ME+ + T +G IT I+F L T EIC QL+NPFLGLPLE GKCESC
Sbjct: 1 MEEASSSTILEGEITGIKFGLATHQEICTASISNCAISHASQLSNPFLGLPLEFGKCESC 60
Query: 241 GTAEPGKCDGHFGYIELPIPIFHPCHLSELRKLLSLVCLKCLRMKKGKIRDKD 399
GT+E GKC+GHFGYIELPIPIFHP H+SEL+++LSL+CLKCL+MKK K K+
Sbjct: 61 GTSEAGKCEGHFGYIELPIPIFHPNHVSELKRMLSLLCLKCLKMKKNKFPTKN 113
>ref|XP_004951807.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Setaria
italica]
Length = 2038
Score = 143 bits (361), Expect = 2e-32
Identities = 63/104 (60%), Positives = 79/104 (75%)
Frame = +1
Query: 88 ADGRITSIRFSLVTDHEICRXXXXXXXXXXXXQLTNPFLGLPLESGKCESCGTAEPGKCD 267
A+G I SI+ SL T+ EIC QL NPFLGLPLE+GKCE+CG +E KC+
Sbjct: 11 AEGAIKSIKLSLSTEEEICTYSINDCPVNHPSQLANPFLGLPLEAGKCEACGASENDKCE 70
Query: 268 GHFGYIELPIPIFHPCHLSELRKLLSLVCLKCLRMKKGKIRDKD 399
GHFGYIELP+PI+HPCH+SELR+LLSL+C KCLR+KKGK+ ++
Sbjct: 71 GHFGYIELPVPIYHPCHISELRQLLSLICFKCLRIKKGKVNKQN 114
>ref|XP_004308588.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Fragaria
vesca subsp. vesca]
Length = 1991
Score = 143 bits (360), Expect = 3e-32
Identities = 64/98 (65%), Positives = 75/98 (76%)
Frame = +1
Query: 91 DGRITSIRFSLVTDHEICRXXXXXXXXXXXXQLTNPFLGLPLESGKCESCGTAEPGKCDG 270
DG + IRF L T EIC QL+NPFLGLPLE GKCESCGT+EPGKC+G
Sbjct: 11 DGELIGIRFGLATHQEICTASMMGCSISHASQLSNPFLGLPLEFGKCESCGTSEPGKCEG 70
Query: 271 HFGYIELPIPIFHPCHLSELRKLLSLVCLKCLRMKKGK 384
HFGYI+LP+PI+HP H+SEL+KLLSL+CLKCL+MKK K
Sbjct: 71 HFGYIDLPVPIYHPNHVSELKKLLSLLCLKCLKMKKNK 108
>ref|XP_003577164.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like
[Brachypodium distachyon]
Length = 1935
Score = 142 bits (359), Expect = 4e-32
Identities = 67/108 (62%), Positives = 80/108 (74%)
Frame = +1
Query: 61 EMEDTRTDTADGRITSIRFSLVTDHEICRXXXXXXXXXXXXQLTNPFLGLPLESGKCESC 240
E + + A+G I SI+ SL T+ EI QL NPFLGLPLE+GKCESC
Sbjct: 2 EEDQSAVLVAEGAIKSIKLSLSTEDEILTYSINDCPVTHPSQLGNPFLGLPLETGKCESC 61
Query: 241 GTAEPGKCDGHFGYIELPIPIFHPCHLSELRKLLSLVCLKCLRMKKGK 384
G +E GKC+GHFGYIELP+PI+HPCH+SELR+LLSLVCLKCLR+KKGK
Sbjct: 62 GASENGKCEGHFGYIELPVPIYHPCHVSELRQLLSLVCLKCLRIKKGK 109
>ref|XP_002513060.1| DNA-directed RNA polymerase, putative [Ricinus communis]
gi|223548071|gb|EEF49563.1| DNA-directed RNA polymerase,
putative [Ricinus communis]
Length = 991
Score = 142 bits (358), Expect = 5e-32
Identities = 64/114 (56%), Positives = 82/114 (71%)
Frame = +1
Query: 61 EMEDTRTDTADGRITSIRFSLVTDHEICRXXXXXXXXXXXXQLTNPFLGLPLESGKCESC 240
+ E+T++ +G + I+F L T EI QLTNPFLGLPLE GKCESC
Sbjct: 3 DKENTQSSFLEGEVVGIKFGLATYKEISAASVSDCPISHSSQLTNPFLGLPLEFGKCESC 62
Query: 241 GTAEPGKCDGHFGYIELPIPIFHPCHLSELRKLLSLVCLKCLRMKKGKIRDKDV 402
GT+EPGKC+GHFGYIELPIPI+HP H+SEL+++LSL+CLKCL++K KI+ V
Sbjct: 63 GTSEPGKCEGHFGYIELPIPIYHPSHVSELKRMLSLLCLKCLKLKTNKIKSSGV 116
>gb|EEE56320.1| hypothetical protein OsJ_05410 [Oryza sativa Japonica Group]
Length = 2017
Score = 140 bits (354), Expect = 1e-31
Identities = 63/113 (55%), Positives = 83/113 (73%)
Frame = +1
Query: 61 EMEDTRTDTADGRITSIRFSLVTDHEICRXXXXXXXXXXXXQLTNPFLGLPLESGKCESC 240
E + + A+G I SI+ SL T+ EI QL NPFLGLPLE+GKCESC
Sbjct: 2 EEDQSAIPVAEGAIKSIKLSLSTEDEIRTYSINDCPVTHPSQLGNPFLGLPLETGKCESC 61
Query: 241 GTAEPGKCDGHFGYIELPIPIFHPCHLSELRKLLSLVCLKCLRMKKGKIRDKD 399
G +E GKC+GHFGYIELP+PI+HPCH++ELR++L++VCLKCLR+KKGK++ +
Sbjct: 62 GASENGKCEGHFGYIELPVPIYHPCHVTELRQILNVVCLKCLRVKKGKVKQTE 114
>gb|EEC72510.1| hypothetical protein OsI_05888 [Oryza sativa Indica Group]
Length = 1867
Score = 140 bits (354), Expect = 1e-31
Identities = 63/113 (55%), Positives = 83/113 (73%)
Frame = +1
Query: 61 EMEDTRTDTADGRITSIRFSLVTDHEICRXXXXXXXXXXXXQLTNPFLGLPLESGKCESC 240
E + + A+G I SI+ SL T+ EI QL NPFLGLPLE+GKCESC
Sbjct: 2 EEDQSAIPVAEGAIKSIKLSLSTEDEIRTYSINDCPVTHPSQLGNPFLGLPLETGKCESC 61
Query: 241 GTAEPGKCDGHFGYIELPIPIFHPCHLSELRKLLSLVCLKCLRMKKGKIRDKD 399
G +E GKC+GHFGYIELP+PI+HPCH++ELR++L++VCLKCLR+KKGK++ +
Sbjct: 62 GASENGKCEGHFGYIELPVPIYHPCHVTELRQILNVVCLKCLRVKKGKVKQTE 114
>ref|NP_001045921.1| Os02g0152800 [Oryza sativa Japonica Group]
gi|113535452|dbj|BAF07835.1| Os02g0152800, partial
[Oryza sativa Japonica Group]
Length = 488
Score = 140 bits (354), Expect = 1e-31
Identities = 63/113 (55%), Positives = 83/113 (73%)
Frame = +1
Query: 61 EMEDTRTDTADGRITSIRFSLVTDHEICRXXXXXXXXXXXXQLTNPFLGLPLESGKCESC 240
E + + A+G I SI+ SL T+ EI QL NPFLGLPLE+GKCESC
Sbjct: 2 EEDQSAIPVAEGAIKSIKLSLSTEDEIRTYSINDCPVTHPSQLGNPFLGLPLETGKCESC 61
Query: 241 GTAEPGKCDGHFGYIELPIPIFHPCHLSELRKLLSLVCLKCLRMKKGKIRDKD 399
G +E GKC+GHFGYIELP+PI+HPCH++ELR++L++VCLKCLR+KKGK++ +
Sbjct: 62 GASENGKCEGHFGYIELPVPIYHPCHVTELRQILNVVCLKCLRVKKGKVKQTE 114
>ref|XP_004230024.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase E
subunit 1 [Solanum lycopersicum]
Length = 1632
Score = 140 bits (353), Expect = 2e-31
Identities = 63/114 (55%), Positives = 82/114 (71%)
Frame = +1
Query: 61 EMEDTRTDTADGRITSIRFSLVTDHEICRXXXXXXXXXXXXQLTNPFLGLPLESGKCESC 240
E + + +DG + I+F L T EIC+ L NPFLGLPLE+G+CESC
Sbjct: 2 EEKSLSSKVSDGIVKRIKFGLATPQEICKSSISDCPITHPSLLLNPFLGLPLEAGRCESC 61
Query: 241 GTAEPGKCDGHFGYIELPIPIFHPCHLSELRKLLSLVCLKCLRMKKGKIRDKDV 402
GTAEPG+C+GHFGYIELPIPI+HP H+SEL+K+LSL+CLKCL+MK K+++ V
Sbjct: 62 GTAEPGQCEGHFGYIELPIPIYHPDHVSELKKMLSLLCLKCLKMKNRKVKNAGV 115
>ref|XP_006646896.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Oryza
brachyantha]
Length = 1993
Score = 140 bits (352), Expect = 2e-31
Identities = 63/110 (57%), Positives = 81/110 (73%)
Frame = +1
Query: 61 EMEDTRTDTADGRITSIRFSLVTDHEICRXXXXXXXXXXXXQLTNPFLGLPLESGKCESC 240
E + + A+G I SI+ SL T+ EI QL NPFLGLPLE+GKCESC
Sbjct: 2 EEDQSAIPVAEGAIKSIKLSLATEDEIRIYSINDCPVTHPSQLGNPFLGLPLETGKCESC 61
Query: 241 GTAEPGKCDGHFGYIELPIPIFHPCHLSELRKLLSLVCLKCLRMKKGKIR 390
G +E GKC+GHFGYIELP+PI+HPCH++ELR++L+LVC KCLR+KKGK++
Sbjct: 62 GASENGKCEGHFGYIELPVPIYHPCHVTELRQILNLVCFKCLRVKKGKVK 111
>ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Cucumis
sativus]
Length = 1959
Score = 139 bits (350), Expect = 4e-31
Identities = 63/98 (64%), Positives = 74/98 (75%)
Frame = +1
Query: 91 DGRITSIRFSLVTDHEICRXXXXXXXXXXXXQLTNPFLGLPLESGKCESCGTAEPGKCDG 270
D I IRFSL EIC QL+NPFLGLP+E GKCESCGT+EPGKC+G
Sbjct: 12 DAEIVGIRFSLANGQEICIAAISDCPITHASQLSNPFLGLPIEFGKCESCGTSEPGKCEG 71
Query: 271 HFGYIELPIPIFHPCHLSELRKLLSLVCLKCLRMKKGK 384
HFGYIELPIPI+HP H++EL+K+LSL+CLKCL+MKK K
Sbjct: 72 HFGYIELPIPIYHPNHITELKKMLSLLCLKCLKMKKTK 109
>gb|EXB62675.1| DNA-directed RNA polymerase E subunit 1 [Morus notabilis]
Length = 2054
Score = 138 bits (347), Expect = 9e-31
Identities = 64/113 (56%), Positives = 81/113 (71%), Gaps = 1/113 (0%)
Frame = +1
Query: 64 MEDTR-TDTADGRITSIRFSLVTDHEICRXXXXXXXXXXXXQLTNPFLGLPLESGKCESC 240
ME+T +D +G I IRF L + EIC QL+NPFLGLPLE GKCESC
Sbjct: 1 MEETNFSDIYEGEIVGIRFGLASHREICTASVSGSSISHATQLSNPFLGLPLEFGKCESC 60
Query: 241 GTAEPGKCDGHFGYIELPIPIFHPCHLSELRKLLSLVCLKCLRMKKGKIRDKD 399
GT++ G C+GHFGYIELP+PI+HP H+SEL+++LSL+CLKCL+MKK K K+
Sbjct: 61 GTSDLGNCEGHFGYIELPVPIYHPSHVSELKRMLSLLCLKCLKMKKNKFPVKN 113
>ref|XP_006411250.1| hypothetical protein EUTSA_v10016128mg [Eutrema salsugineum]
gi|557112419|gb|ESQ52703.1| hypothetical protein
EUTSA_v10016128mg [Eutrema salsugineum]
Length = 1874
Score = 137 bits (346), Expect = 1e-30
Identities = 63/108 (58%), Positives = 77/108 (71%), Gaps = 1/108 (0%)
Frame = +1
Query: 64 MEDTRT-DTADGRITSIRFSLVTDHEICRXXXXXXXXXXXXQLTNPFLGLPLESGKCESC 240
MED + D +G I IRF+L T HEIC QL+N FLGLPLE G+CESC
Sbjct: 1 MEDAASSDILEGEIVGIRFALATPHEICTASISDSAINHSSQLSNSFLGLPLEFGRCESC 60
Query: 241 GTAEPGKCDGHFGYIELPIPIFHPCHLSELRKLLSLVCLKCLRMKKGK 384
G EP KC+GHFGYIELP+PI+HP H+SEL+++LSL+CLKCL +KK K
Sbjct: 61 GATEPDKCEGHFGYIELPVPIYHPAHVSELKQMLSLLCLKCLNIKKAK 108
>ref|XP_004511031.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Cicer
arietinum]
Length = 2263
Score = 137 bits (345), Expect = 2e-30
Identities = 63/108 (58%), Positives = 78/108 (72%), Gaps = 1/108 (0%)
Frame = +1
Query: 64 MEDTRTDTA-DGRITSIRFSLVTDHEICRXXXXXXXXXXXXQLTNPFLGLPLESGKCESC 240
MED T + D ++ IRFS+ T HEI QL NPFLGLPLE G+CESC
Sbjct: 1 MEDNPTSSVLDAKVIGIRFSMATRHEISTASISDSTISHASQLANPFLGLPLEFGRCESC 60
Query: 241 GTAEPGKCDGHFGYIELPIPIFHPCHLSELRKLLSLVCLKCLRMKKGK 384
GT+E GKC+GHFGYIELP+PI+HP H++EL+K+LSLVCL CL++KK K
Sbjct: 61 GTSEAGKCEGHFGYIELPVPIYHPSHVTELKKILSLVCLNCLKLKKTK 108