BLASTX nr result

ID: Sinomenium21_contig00030759 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00030759
         (349 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71893.1| hypothetical protein VITISV_043764 [Vitis vinifera]    57   2e-06
ref|XP_006853637.1| hypothetical protein AMTR_s00056p00074670 [A...    57   3e-06
ref|XP_002284034.1| PREDICTED: nucleoporin NUP53 [Vitis vinifera...    56   6e-06

>emb|CAN71893.1| hypothetical protein VITISV_043764 [Vitis vinifera]
          Length = 410

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 27/41 (65%), Positives = 34/41 (82%)
 Frame = +1

Query: 1   SRAFTRPYYLQNSNPSQRAPGVIASPAKSVVSKIVDLMFGM 123
           SR   RPYYLQN + ++++ G IASPAKSVVSKI+DLMFG+
Sbjct: 370 SRVSPRPYYLQNGSNARQSSGAIASPAKSVVSKIMDLMFGV 410


>ref|XP_006853637.1| hypothetical protein AMTR_s00056p00074670 [Amborella trichopoda]
           gi|548857298|gb|ERN15104.1| hypothetical protein
           AMTR_s00056p00074670 [Amborella trichopoda]
          Length = 339

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 27/40 (67%), Positives = 34/40 (85%)
 Frame = +1

Query: 4   RAFTRPYYLQNSNPSQRAPGVIASPAKSVVSKIVDLMFGM 123
           RA +RPYYLQ+ + +QR  G IASP+KSVVSKI+DLMFG+
Sbjct: 300 RASSRPYYLQSQDGNQRNAGAIASPSKSVVSKIMDLMFGI 339


>ref|XP_002284034.1| PREDICTED: nucleoporin NUP53 [Vitis vinifera]
           gi|297743215|emb|CBI36082.3| unnamed protein product
           [Vitis vinifera]
          Length = 317

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 26/40 (65%), Positives = 33/40 (82%)
 Frame = +1

Query: 4   RAFTRPYYLQNSNPSQRAPGVIASPAKSVVSKIVDLMFGM 123
           R   RPYYLQN + ++++ G IASPAKSVVSKI+DLMFG+
Sbjct: 278 RVSPRPYYLQNGSNARQSSGAIASPAKSVVSKIMDLMFGV 317


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