BLASTX nr result
ID: Sinomenium21_contig00030461
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00030461
(761 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI17913.3| unnamed protein product [Vitis vinifera] 89 2e-15
ref|XP_002263967.1| PREDICTED: DNA ligase 4-like [Vitis vinifera] 89 2e-15
ref|XP_002534602.1| conserved hypothetical protein [Ricinus comm... 87 6e-15
ref|XP_007014429.1| DNA ligase IV [Theobroma cacao] gi|508784792... 79 2e-12
gb|EXC31206.1| DNA ligase 4 [Morus notabilis] 78 3e-12
ref|XP_007225204.1| hypothetical protein PRUPE_ppa002057mg [Prun... 76 1e-11
ref|XP_004487997.1| PREDICTED: DNA ligase 4-like [Cicer arietinum] 73 1e-10
ref|XP_006474277.1| PREDICTED: DNA ligase 4-like isoform X1 [Cit... 70 8e-10
ref|XP_006453240.1| hypothetical protein CICLE_v10007283mg [Citr... 70 8e-10
ref|XP_006453239.1| hypothetical protein CICLE_v10007283mg [Citr... 70 8e-10
ref|XP_006597804.1| PREDICTED: DNA ligase 4-like isoform X5 [Gly... 69 1e-09
ref|XP_006597803.1| PREDICTED: DNA ligase 4-like isoform X4 [Gly... 69 1e-09
ref|XP_006597802.1| PREDICTED: DNA ligase 4-like isoform X3 [Gly... 69 1e-09
ref|XP_006597801.1| PREDICTED: DNA ligase 4-like isoform X2 [Gly... 69 1e-09
ref|XP_003546435.1| PREDICTED: DNA ligase 4-like isoform X1 [Gly... 69 1e-09
ref|XP_006344528.1| PREDICTED: DNA ligase 4-like isoform X3 [Sol... 64 4e-08
ref|XP_006344527.1| PREDICTED: DNA ligase 4-like isoform X2 [Sol... 64 4e-08
ref|XP_006344526.1| PREDICTED: DNA ligase 4-like isoform X1 [Sol... 64 4e-08
ref|XP_004242917.1| PREDICTED: DNA ligase 4-like [Solanum lycope... 64 6e-08
ref|XP_004165348.1| PREDICTED: LOW QUALITY PROTEIN: DNA ligase 4... 63 1e-07
>emb|CBI17913.3| unnamed protein product [Vitis vinifera]
Length = 1163
Score = 89.0 bits (219), Expect = 2e-15
Identities = 51/101 (50%), Positives = 66/101 (65%)
Frame = +3
Query: 381 DKVHLIEMDHENDTKESIQAEGFGDKNDDEKKDTSQKPEVMVNPLRAMLFDMIPTLGVNK 560
D+ IE+D EN K D+ KK ++K EVMV+P++AML DMIP+LGV K
Sbjct: 1079 DRAQDIELDSEN-------------KVDNSKK--TEKLEVMVDPVQAMLLDMIPSLGVKK 1123
Query: 561 ANEISKYVTQSEEPQLDPGAEPVKKKKVSYKDIAGELLNDW 683
A E + + E+P ++ GAEPVKKKKVSYKD+AG LL DW
Sbjct: 1124 A-ESTNPIIDDEKPPVEQGAEPVKKKKVSYKDVAGALLKDW 1163
>ref|XP_002263967.1| PREDICTED: DNA ligase 4-like [Vitis vinifera]
Length = 1162
Score = 89.0 bits (219), Expect = 2e-15
Identities = 51/101 (50%), Positives = 66/101 (65%)
Frame = +3
Query: 381 DKVHLIEMDHENDTKESIQAEGFGDKNDDEKKDTSQKPEVMVNPLRAMLFDMIPTLGVNK 560
D+ IE+D EN K D+ KK ++K EVMV+P++AML DMIP+LGV K
Sbjct: 1078 DRAQDIELDSEN-------------KVDNSKK--TEKLEVMVDPVQAMLLDMIPSLGVKK 1122
Query: 561 ANEISKYVTQSEEPQLDPGAEPVKKKKVSYKDIAGELLNDW 683
A E + + E+P ++ GAEPVKKKKVSYKD+AG LL DW
Sbjct: 1123 A-ESTNPIIDDEKPPVEQGAEPVKKKKVSYKDVAGALLKDW 1162
>ref|XP_002534602.1| conserved hypothetical protein [Ricinus communis]
gi|223524943|gb|EEF27780.1| conserved hypothetical
protein [Ricinus communis]
Length = 251
Score = 87.0 bits (214), Expect = 6e-15
Identities = 47/96 (48%), Positives = 63/96 (65%), Gaps = 1/96 (1%)
Frame = +3
Query: 396 IEMDHENDTKESIQAEG-FGDKNDDEKKDTSQKPEVMVNPLRAMLFDMIPTLGVNKANEI 572
I H+N +S + G ++D E+K+ K E+MV+P+ AML DMIP+LGV EI
Sbjct: 157 IRKRHQNRDFQSDKTHSEIGGRHDVEEKENPDKLEIMVDPIHAMLLDMIPSLGVRNV-EI 215
Query: 573 SKYVTQSEEPQLDPGAEPVKKKKVSYKDIAGELLND 680
S V + E+P DP A+PVKKKKVSYKD+A E+L D
Sbjct: 216 SNQVFEREKPAGDPTAQPVKKKKVSYKDVASEMLKD 251
>ref|XP_007014429.1| DNA ligase IV [Theobroma cacao] gi|508784792|gb|EOY32048.1| DNA
ligase IV [Theobroma cacao]
Length = 1195
Score = 79.0 bits (193), Expect = 2e-12
Identities = 49/122 (40%), Positives = 68/122 (55%), Gaps = 18/122 (14%)
Frame = +3
Query: 372 ECPDKVHLIEMDHENDTKESIQAEGFGDKNDDEKK--DTSQKPEVMVNPLRAMLFDMIPT 545
E DK +EM N+ + +AE + D++ S+K EVMV+P++AML DMIP+
Sbjct: 1075 EWSDKAPEVEMCEPNNDQSCKKAEKYNLMELDQENCGAKSEKLEVMVDPVQAMLLDMIPS 1134
Query: 546 LGVNKANEISKYVTQSEEPQLDPGAE----------------PVKKKKVSYKDIAGELLN 677
LG+ + +V ++E+P D AE PVKKKKVSYKD+AGELL
Sbjct: 1135 LGIKHVEATNSFV-ENEKPPADNNAEIPVVEDYKLDADFIAPPVKKKKVSYKDVAGELLK 1193
Query: 678 DW 683
DW
Sbjct: 1194 DW 1195
>gb|EXC31206.1| DNA ligase 4 [Morus notabilis]
Length = 821
Score = 78.2 bits (191), Expect = 3e-12
Identities = 43/91 (47%), Positives = 55/91 (60%)
Frame = +3
Query: 411 ENDTKESIQAEGFGDKNDDEKKDTSQKPEVMVNPLRAMLFDMIPTLGVNKANEISKYVTQ 590
EN+T E +E N +K E+M +P+ AML DMIP LG K EI+ T+
Sbjct: 737 ENETSEKQNSE-----NSQPPPPPPEKLELMTDPVHAMLLDMIPRLGKEKV-EITNTSTE 790
Query: 591 SEEPQLDPGAEPVKKKKVSYKDIAGELLNDW 683
++P +DP A KKKKVSYKDIAG+LL DW
Sbjct: 791 DKKPAVDPNAPQPKKKKVSYKDIAGDLLKDW 821
>ref|XP_007225204.1| hypothetical protein PRUPE_ppa002057mg [Prunus persica]
gi|462422140|gb|EMJ26403.1| hypothetical protein
PRUPE_ppa002057mg [Prunus persica]
Length = 723
Score = 75.9 bits (185), Expect = 1e-11
Identities = 39/77 (50%), Positives = 52/77 (67%)
Frame = +3
Query: 453 DKNDDEKKDTSQKPEVMVNPLRAMLFDMIPTLGVNKANEISKYVTQSEEPQLDPGAEPVK 632
+K + E +K EVM +P++AMLFDMIP+L + K E + + E+P +D A P K
Sbjct: 648 EKCNIEDSGKPEKLEVMADPVQAMLFDMIPSLAMKKV-ETTNTSIEKEKPAVDLNAGPSK 706
Query: 633 KKKVSYKDIAGELLNDW 683
KKKVSYKD+AGELL DW
Sbjct: 707 KKKVSYKDVAGELLKDW 723
>ref|XP_004487997.1| PREDICTED: DNA ligase 4-like [Cicer arietinum]
Length = 1168
Score = 73.2 bits (178), Expect = 1e-10
Identities = 44/116 (37%), Positives = 69/116 (59%), Gaps = 9/116 (7%)
Frame = +3
Query: 363 EAVECPDKVHLIEM------DHENDTKESIQAEGFGDKNDDEKKDTSQKPEVMVNPLRAM 524
+AVEC ++ IE+ HEN + I+ D ++DE ++K E++ +P++AM
Sbjct: 1057 KAVECSEQNKGIELVDFRDKQHENMSVPEIE---MNDVHNDENSHVTEKLEILTDPVQAM 1113
Query: 525 LFDMIPTLGVNKANE-ISKYVTQSEEPQLDPGAEP--VKKKKVSYKDIAGELLNDW 683
L DMIP+L K + ++ YV + + P++ EP KKKKVS+K IAG+LL DW
Sbjct: 1114 LLDMIPSLATEKVEQPLNSYVEEEKPPEIS-NEEPSTSKKKKVSFKAIAGDLLKDW 1168
>ref|XP_006474277.1| PREDICTED: DNA ligase 4-like isoform X1 [Citrus sinensis]
gi|568840649|ref|XP_006474278.1| PREDICTED: DNA ligase
4-like isoform X2 [Citrus sinensis]
Length = 1174
Score = 70.1 bits (170), Expect = 8e-10
Identities = 44/113 (38%), Positives = 61/113 (53%)
Frame = +3
Query: 345 DFSNRKEAVECPDKVHLIEMDHENDTKESIQAEGFGDKNDDEKKDTSQKPEVMVNPLRAM 524
DF K+ V PD IEM +K+S +T+ K +V + ++AM
Sbjct: 1084 DFGKEKQTVRAPD----IEMRERYHSKDS---------------ETTDKQQV--DAVQAM 1122
Query: 525 LFDMIPTLGVNKANEISKYVTQSEEPQLDPGAEPVKKKKVSYKDIAGELLNDW 683
L DMIP+LG+ K + + + + E +P AEP KKKKVSYKDIA +LL DW
Sbjct: 1123 LLDMIPSLGM-KNEKTTNPIPKEESSSAEPSAEPTKKKKVSYKDIASKLLKDW 1174
>ref|XP_006453240.1| hypothetical protein CICLE_v10007283mg [Citrus clementina]
gi|568840651|ref|XP_006474279.1| PREDICTED: DNA ligase
4-like isoform X3 [Citrus sinensis]
gi|557556466|gb|ESR66480.1| hypothetical protein
CICLE_v10007283mg [Citrus clementina]
Length = 1159
Score = 70.1 bits (170), Expect = 8e-10
Identities = 44/113 (38%), Positives = 61/113 (53%)
Frame = +3
Query: 345 DFSNRKEAVECPDKVHLIEMDHENDTKESIQAEGFGDKNDDEKKDTSQKPEVMVNPLRAM 524
DF K+ V PD IEM +K+S +T+ K +V + ++AM
Sbjct: 1069 DFGKEKQTVRAPD----IEMRERYHSKDS---------------ETTDKQQV--DAVQAM 1107
Query: 525 LFDMIPTLGVNKANEISKYVTQSEEPQLDPGAEPVKKKKVSYKDIAGELLNDW 683
L DMIP+LG+ K + + + + E +P AEP KKKKVSYKDIA +LL DW
Sbjct: 1108 LLDMIPSLGM-KNEKTTNPIPKEESSSAEPSAEPTKKKKVSYKDIASKLLKDW 1159
>ref|XP_006453239.1| hypothetical protein CICLE_v10007283mg [Citrus clementina]
gi|557556465|gb|ESR66479.1| hypothetical protein
CICLE_v10007283mg [Citrus clementina]
Length = 824
Score = 70.1 bits (170), Expect = 8e-10
Identities = 44/113 (38%), Positives = 61/113 (53%)
Frame = +3
Query: 345 DFSNRKEAVECPDKVHLIEMDHENDTKESIQAEGFGDKNDDEKKDTSQKPEVMVNPLRAM 524
DF K+ V PD IEM +K+S +T+ K +V + ++AM
Sbjct: 734 DFGKEKQTVRAPD----IEMRERYHSKDS---------------ETTDKQQV--DAVQAM 772
Query: 525 LFDMIPTLGVNKANEISKYVTQSEEPQLDPGAEPVKKKKVSYKDIAGELLNDW 683
L DMIP+LG+ K + + + + E +P AEP KKKKVSYKDIA +LL DW
Sbjct: 773 LLDMIPSLGM-KNEKTTNPIPKEESSSAEPSAEPTKKKKVSYKDIASKLLKDW 824
>ref|XP_006597804.1| PREDICTED: DNA ligase 4-like isoform X5 [Glycine max]
Length = 939
Score = 69.3 bits (168), Expect = 1e-09
Identities = 35/81 (43%), Positives = 57/81 (70%), Gaps = 4/81 (4%)
Frame = +3
Query: 453 DKNDDEKKDTSQKPEVMVNPLRAMLFDMIPTLGVNKANE-ISKYVTQSEEPQL-DPGAEP 626
D+++++ + ++K E+ +PL+AMLFDMIP+L K + +++ V + + P+ + AEP
Sbjct: 859 DRHNEQNNEVTEKLEISADPLQAMLFDMIPSLATQKVEQPMNRSVREEKLPETSNAEAEP 918
Query: 627 V--KKKKVSYKDIAGELLNDW 683
+ KKKKVSYKD+A ELL DW
Sbjct: 919 MTTKKKKVSYKDVASELLKDW 939
>ref|XP_006597803.1| PREDICTED: DNA ligase 4-like isoform X4 [Glycine max]
Length = 955
Score = 69.3 bits (168), Expect = 1e-09
Identities = 35/81 (43%), Positives = 57/81 (70%), Gaps = 4/81 (4%)
Frame = +3
Query: 453 DKNDDEKKDTSQKPEVMVNPLRAMLFDMIPTLGVNKANE-ISKYVTQSEEPQL-DPGAEP 626
D+++++ + ++K E+ +PL+AMLFDMIP+L K + +++ V + + P+ + AEP
Sbjct: 875 DRHNEQNNEVTEKLEISADPLQAMLFDMIPSLATQKVEQPMNRSVREEKLPETSNAEAEP 934
Query: 627 V--KKKKVSYKDIAGELLNDW 683
+ KKKKVSYKD+A ELL DW
Sbjct: 935 MTTKKKKVSYKDVASELLKDW 955
>ref|XP_006597802.1| PREDICTED: DNA ligase 4-like isoform X3 [Glycine max]
Length = 1011
Score = 69.3 bits (168), Expect = 1e-09
Identities = 35/81 (43%), Positives = 57/81 (70%), Gaps = 4/81 (4%)
Frame = +3
Query: 453 DKNDDEKKDTSQKPEVMVNPLRAMLFDMIPTLGVNKANE-ISKYVTQSEEPQL-DPGAEP 626
D+++++ + ++K E+ +PL+AMLFDMIP+L K + +++ V + + P+ + AEP
Sbjct: 931 DRHNEQNNEVTEKLEISADPLQAMLFDMIPSLATQKVEQPMNRSVREEKLPETSNAEAEP 990
Query: 627 V--KKKKVSYKDIAGELLNDW 683
+ KKKKVSYKD+A ELL DW
Sbjct: 991 MTTKKKKVSYKDVASELLKDW 1011
>ref|XP_006597801.1| PREDICTED: DNA ligase 4-like isoform X2 [Glycine max]
Length = 1104
Score = 69.3 bits (168), Expect = 1e-09
Identities = 35/81 (43%), Positives = 57/81 (70%), Gaps = 4/81 (4%)
Frame = +3
Query: 453 DKNDDEKKDTSQKPEVMVNPLRAMLFDMIPTLGVNKANE-ISKYVTQSEEPQL-DPGAEP 626
D+++++ + ++K E+ +PL+AMLFDMIP+L K + +++ V + + P+ + AEP
Sbjct: 1024 DRHNEQNNEVTEKLEISADPLQAMLFDMIPSLATQKVEQPMNRSVREEKLPETSNAEAEP 1083
Query: 627 V--KKKKVSYKDIAGELLNDW 683
+ KKKKVSYKD+A ELL DW
Sbjct: 1084 MTTKKKKVSYKDVASELLKDW 1104
>ref|XP_003546435.1| PREDICTED: DNA ligase 4-like isoform X1 [Glycine max]
Length = 1171
Score = 69.3 bits (168), Expect = 1e-09
Identities = 35/81 (43%), Positives = 57/81 (70%), Gaps = 4/81 (4%)
Frame = +3
Query: 453 DKNDDEKKDTSQKPEVMVNPLRAMLFDMIPTLGVNKANE-ISKYVTQSEEPQL-DPGAEP 626
D+++++ + ++K E+ +PL+AMLFDMIP+L K + +++ V + + P+ + AEP
Sbjct: 1091 DRHNEQNNEVTEKLEISADPLQAMLFDMIPSLATQKVEQPMNRSVREEKLPETSNAEAEP 1150
Query: 627 V--KKKKVSYKDIAGELLNDW 683
+ KKKKVSYKD+A ELL DW
Sbjct: 1151 MTTKKKKVSYKDVASELLKDW 1171
>ref|XP_006344528.1| PREDICTED: DNA ligase 4-like isoform X3 [Solanum tuberosum]
Length = 1119
Score = 64.3 bits (155), Expect = 4e-08
Identities = 34/79 (43%), Positives = 45/79 (56%)
Frame = +3
Query: 447 FGDKNDDEKKDTSQKPEVMVNPLRAMLFDMIPTLGVNKANEISKYVTQSEEPQLDPGAEP 626
+G N KD + E V+P++AML MIP L + V + ++P+ D P
Sbjct: 1042 YGSGNIARGKDKVDELEDPVDPVQAMLLHMIPHLDSKPTRSVDTLV-KDDKPEADTNPSP 1100
Query: 627 VKKKKVSYKDIAGELLNDW 683
KKKKVSYKD+AGELL DW
Sbjct: 1101 KKKKKVSYKDVAGELLKDW 1119
>ref|XP_006344527.1| PREDICTED: DNA ligase 4-like isoform X2 [Solanum tuberosum]
Length = 1171
Score = 64.3 bits (155), Expect = 4e-08
Identities = 34/79 (43%), Positives = 45/79 (56%)
Frame = +3
Query: 447 FGDKNDDEKKDTSQKPEVMVNPLRAMLFDMIPTLGVNKANEISKYVTQSEEPQLDPGAEP 626
+G N KD + E V+P++AML MIP L + V + ++P+ D P
Sbjct: 1094 YGSGNIARGKDKVDELEDPVDPVQAMLLHMIPHLDSKPTRSVDTLV-KDDKPEADTNPSP 1152
Query: 627 VKKKKVSYKDIAGELLNDW 683
KKKKVSYKD+AGELL DW
Sbjct: 1153 KKKKKVSYKDVAGELLKDW 1171
>ref|XP_006344526.1| PREDICTED: DNA ligase 4-like isoform X1 [Solanum tuberosum]
Length = 1172
Score = 64.3 bits (155), Expect = 4e-08
Identities = 34/79 (43%), Positives = 45/79 (56%)
Frame = +3
Query: 447 FGDKNDDEKKDTSQKPEVMVNPLRAMLFDMIPTLGVNKANEISKYVTQSEEPQLDPGAEP 626
+G N KD + E V+P++AML MIP L + V + ++P+ D P
Sbjct: 1095 YGSGNIARGKDKVDELEDPVDPVQAMLLHMIPHLDSKPTRSVDTLV-KDDKPEADTNPSP 1153
Query: 627 VKKKKVSYKDIAGELLNDW 683
KKKKVSYKD+AGELL DW
Sbjct: 1154 KKKKKVSYKDVAGELLKDW 1172
>ref|XP_004242917.1| PREDICTED: DNA ligase 4-like [Solanum lycopersicum]
Length = 1172
Score = 63.9 bits (154), Expect = 6e-08
Identities = 36/91 (39%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Frame = +3
Query: 414 NDTKESIQAEGFGDKNDDEKKD-TSQKPEVMVNPLRAMLFDMIPTLGVNKANEISKYVTQ 590
N+ + +G N KD +K E V+P++AML MIP L I V +
Sbjct: 1083 NERLDKAHETSYGSGNIARGKDKVDEKLEDPVDPVQAMLLHMIPHLDSKPTRSIDTLV-K 1141
Query: 591 SEEPQLDPGAEPVKKKKVSYKDIAGELLNDW 683
++P D P KKKK+SYKD+AGELL DW
Sbjct: 1142 DDKPDADTNPSPKKKKKISYKDVAGELLKDW 1172
>ref|XP_004165348.1| PREDICTED: LOW QUALITY PROTEIN: DNA ligase 4-like, partial [Cucumis
sativus]
Length = 918
Score = 62.8 bits (151), Expect = 1e-07
Identities = 34/80 (42%), Positives = 51/80 (63%), Gaps = 6/80 (7%)
Frame = +3
Query: 462 DDEKKDTSQKPEVMVNPLRAMLFDMIPTLGVN------KANEISKYVTQSEEPQLDPGAE 623
D + + +K EVM +PL AML DM+P+LG++ ++ S V + ++P ++ +E
Sbjct: 840 DSKSVEKPEKLEVMKDPLEAMLLDMVPSLGMSGTKSSISSSSSSSTVVEEKKPFVENKSE 899
Query: 624 PVKKKKVSYKDIAGELLNDW 683
V KKKVSYKD+A ELL DW
Sbjct: 900 AV-KKKVSYKDVASELLKDW 918