BLASTX nr result
ID: Sinomenium21_contig00030303
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00030303
(409 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006381765.1| hypothetical protein POPTR_0006s17780g [Popu... 195 5e-48
ref|XP_006380470.1| hypothetical protein POPTR_0007s06560g [Popu... 195 5e-48
ref|XP_006380469.1| hypothetical protein POPTR_0007s06560g [Popu... 195 5e-48
emb|CBI28010.3| unnamed protein product [Vitis vinifera] 190 2e-46
ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polyme... 190 2e-46
ref|XP_004135802.1| PREDICTED: probable RNA-dependent RNA polyme... 188 8e-46
ref|XP_006451272.1| hypothetical protein CICLE_v10007331mg [Citr... 183 2e-44
ref|XP_006451271.1| hypothetical protein CICLE_v10007331mg [Citr... 183 2e-44
ref|NP_179583.3| probable RNA-dependent RNA polymerase 5 [Arabid... 178 6e-43
emb|CAN71520.1| hypothetical protein VITISV_042316 [Vitis vinifera] 177 1e-42
ref|XP_002883963.1| RNA-dependent RNA polymerase family protein ... 177 2e-42
gb|EYU30717.1| hypothetical protein MIMGU_mgv1a001145mg [Mimulus... 175 5e-42
gb|EXB59780.1| putative RNA-dependent RNA polymerase 3 [Morus no... 173 2e-41
ref|XP_006853665.1| hypothetical protein AMTR_s00056p00110240 [A... 173 3e-41
ref|XP_006408908.1| hypothetical protein EUTSA_v10001897mg [Eutr... 171 1e-40
ref|XP_007152979.1| hypothetical protein PHAVU_004G1764001g, par... 170 2e-40
ref|XP_006296906.1| hypothetical protein CARUB_v10012898mg [Caps... 169 4e-40
gb|AHL27588.1| RNA-dependent RNA polymerase 5 [Salvia miltiorrhiza] 168 8e-40
ref|XP_006408907.1| hypothetical protein EUTSA_v10001896mg [Eutr... 167 1e-39
ref|XP_006338861.1| PREDICTED: probable RNA-dependent RNA polyme... 167 2e-39
>ref|XP_006381765.1| hypothetical protein POPTR_0006s17780g [Populus trichocarpa]
gi|550336519|gb|ERP59562.1| hypothetical protein
POPTR_0006s17780g [Populus trichocarpa]
Length = 866
Score = 195 bits (496), Expect = 5e-48
Identities = 92/134 (68%), Positives = 117/134 (87%)
Frame = -3
Query: 404 LSKYLIALLNYGGVPNQYFMDLLSNALKDAQNVRCNKRTALKVSLRYGEMDDFLVSRMLL 225
LSK LIALL+YGGVP ++FM +L+NAL+DA + NK+ AL+V+L YG+MDD +V+ M+
Sbjct: 402 LSKNLIALLSYGGVPEEFFMGILNNALEDAHGILSNKKAALRVALNYGDMDDNIVATMIG 461
Query: 224 CGIPLDEPYLQYRLSVLIREERKALKGGKIPISESYYLMGTADPTGLLKTDEVCIILADG 45
CGIPL+EPYLQ+ LS+L +EE+K+LKGGKIP+ ESYYLMGTADPTGLL++DEVCIIL G
Sbjct: 462 CGIPLEEPYLQHHLSILKKEEKKSLKGGKIPVPESYYLMGTADPTGLLESDEVCIILDCG 521
Query: 44 QISGKVLVYRNPGL 3
Q+SG+VLVYRNPGL
Sbjct: 522 QVSGEVLVYRNPGL 535
>ref|XP_006380470.1| hypothetical protein POPTR_0007s06560g [Populus trichocarpa]
gi|550334280|gb|ERP58267.1| hypothetical protein
POPTR_0007s06560g [Populus trichocarpa]
Length = 877
Score = 195 bits (496), Expect = 5e-48
Identities = 92/134 (68%), Positives = 117/134 (87%)
Frame = -3
Query: 404 LSKYLIALLNYGGVPNQYFMDLLSNALKDAQNVRCNKRTALKVSLRYGEMDDFLVSRMLL 225
LSK LIALL+YGGVP ++FM +++NAL+DA + NK AL+V+L YG+MDD +V+ M+
Sbjct: 402 LSKNLIALLSYGGVPEEFFMGIVNNALEDAHGILSNKNAALRVALNYGDMDDNIVATMIG 461
Query: 224 CGIPLDEPYLQYRLSVLIREERKALKGGKIPISESYYLMGTADPTGLLKTDEVCIILADG 45
CGIPL+EPYLQ RLS+L++EE+K+LKGGKIP+ ESYYLMGTADPTGLL++DEVCIIL G
Sbjct: 462 CGIPLEEPYLQCRLSILMKEEKKSLKGGKIPVPESYYLMGTADPTGLLESDEVCIILDCG 521
Query: 44 QISGKVLVYRNPGL 3
QISG+VL+YRNPGL
Sbjct: 522 QISGEVLIYRNPGL 535
>ref|XP_006380469.1| hypothetical protein POPTR_0007s06560g [Populus trichocarpa]
gi|550334279|gb|ERP58266.1| hypothetical protein
POPTR_0007s06560g [Populus trichocarpa]
Length = 899
Score = 195 bits (496), Expect = 5e-48
Identities = 92/134 (68%), Positives = 117/134 (87%)
Frame = -3
Query: 404 LSKYLIALLNYGGVPNQYFMDLLSNALKDAQNVRCNKRTALKVSLRYGEMDDFLVSRMLL 225
LSK LIALL+YGGVP ++FM +++NAL+DA + NK AL+V+L YG+MDD +V+ M+
Sbjct: 424 LSKNLIALLSYGGVPEEFFMGIVNNALEDAHGILSNKNAALRVALNYGDMDDNIVATMIG 483
Query: 224 CGIPLDEPYLQYRLSVLIREERKALKGGKIPISESYYLMGTADPTGLLKTDEVCIILADG 45
CGIPL+EPYLQ RLS+L++EE+K+LKGGKIP+ ESYYLMGTADPTGLL++DEVCIIL G
Sbjct: 484 CGIPLEEPYLQCRLSILMKEEKKSLKGGKIPVPESYYLMGTADPTGLLESDEVCIILDCG 543
Query: 44 QISGKVLVYRNPGL 3
QISG+VL+YRNPGL
Sbjct: 544 QISGEVLIYRNPGL 557
>emb|CBI28010.3| unnamed protein product [Vitis vinifera]
Length = 929
Score = 190 bits (483), Expect = 2e-46
Identities = 88/134 (65%), Positives = 117/134 (87%)
Frame = -3
Query: 404 LSKYLIALLNYGGVPNQYFMDLLSNALKDAQNVRCNKRTALKVSLRYGEMDDFLVSRMLL 225
LSKYLIALL+YGGVPN+YFM+LL +AL+DA +V+ +KR AL+VSLR+GEMDD +V+RM+L
Sbjct: 455 LSKYLIALLSYGGVPNEYFMNLLKDALEDAPSVQSSKRAALRVSLRFGEMDDSIVTRMIL 514
Query: 224 CGIPLDEPYLQYRLSVLIREERKALKGGKIPISESYYLMGTADPTGLLKTDEVCIILADG 45
GIP+DEP+L + LS ++ EERK L+ GK+P+++ +YLMGTADPTG LK+DEVCIIL G
Sbjct: 515 SGIPIDEPFLHHCLSFMVNEERKGLRVGKLPVNDCFYLMGTADPTGTLKSDEVCIILDHG 574
Query: 44 QISGKVLVYRNPGL 3
Q+ G+VLVY++PGL
Sbjct: 575 QVQGRVLVYKHPGL 588
>ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Vitis
vinifera]
Length = 943
Score = 190 bits (483), Expect = 2e-46
Identities = 88/134 (65%), Positives = 117/134 (87%)
Frame = -3
Query: 404 LSKYLIALLNYGGVPNQYFMDLLSNALKDAQNVRCNKRTALKVSLRYGEMDDFLVSRMLL 225
LSKYLIALL+YGGVPN+YFM+LL +AL+DA +V+ +KR AL+VSLR+GEMDD +V+RM+L
Sbjct: 469 LSKYLIALLSYGGVPNEYFMNLLKDALEDAPSVQSSKRAALRVSLRFGEMDDSIVTRMIL 528
Query: 224 CGIPLDEPYLQYRLSVLIREERKALKGGKIPISESYYLMGTADPTGLLKTDEVCIILADG 45
GIP+DEP+L + LS ++ EERK L+ GK+P+++ +YLMGTADPTG LK+DEVCIIL G
Sbjct: 529 SGIPIDEPFLHHCLSFMVNEERKGLRVGKLPVNDCFYLMGTADPTGTLKSDEVCIILDHG 588
Query: 44 QISGKVLVYRNPGL 3
Q+ G+VLVY++PGL
Sbjct: 589 QVQGRVLVYKHPGL 602
>ref|XP_004135802.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Cucumis
sativus]
Length = 1056
Score = 188 bits (477), Expect = 8e-46
Identities = 91/134 (67%), Positives = 113/134 (84%)
Frame = -3
Query: 404 LSKYLIALLNYGGVPNQYFMDLLSNALKDAQNVRCNKRTALKVSLRYGEMDDFLVSRMLL 225
LS+ LIALLNYGGVP +YFM++L +ALKD Q V +KR AL+VS+ GEMDDFLV+RM+L
Sbjct: 583 LSRNLIALLNYGGVPREYFMNILVDALKDVQGVFSSKRAALRVSINNGEMDDFLVARMIL 642
Query: 224 CGIPLDEPYLQYRLSVLIREERKALKGGKIPISESYYLMGTADPTGLLKTDEVCIILADG 45
GIPLDE YLQYRLSVL++EE+K+LK G++ + E YYLMGT DPT L++ EVC+IL +G
Sbjct: 643 AGIPLDESYLQYRLSVLLKEEKKSLKSGRLHVPECYYLMGTVDPTFTLESGEVCVILYNG 702
Query: 44 QISGKVLVYRNPGL 3
QI+GKVLVYRNPGL
Sbjct: 703 QINGKVLVYRNPGL 716
>ref|XP_006451272.1| hypothetical protein CICLE_v10007331mg [Citrus clementina]
gi|568843311|ref|XP_006475557.1| PREDICTED: probable
RNA-dependent RNA polymerase 3-like isoform X2 [Citrus
sinensis] gi|557554498|gb|ESR64512.1| hypothetical
protein CICLE_v10007331mg [Citrus clementina]
Length = 1013
Score = 183 bits (464), Expect = 2e-44
Identities = 92/136 (67%), Positives = 114/136 (83%), Gaps = 2/136 (1%)
Frame = -3
Query: 404 LSKYLIALLNYGGVPNQYFMDLLSNALKDAQNVRCNKRTALKVSLRYGEMD-DFLVSRML 228
LS+ LIALL+YGGVP +F+D+L NAL DA+ V NKR ALKVS YG MD DF +RM+
Sbjct: 536 LSRNLIALLSYGGVPEIFFLDILRNALDDARGVFSNKRNALKVSFNYGGMDYDFTSARMI 595
Query: 227 LCGIPLDEPYLQYRLSVLIREERKALKGGKIPISESYYLMGTADPTGLLKTDEVCIILAD 48
L GI LDEPYLQ+RLS+L++EE+K+L+ GK+P++ESYYLMGT DPTG+LK++EVCIIL D
Sbjct: 596 LSGISLDEPYLQHRLSILMKEEKKSLQAGKLPVTESYYLMGTVDPTGILKSNEVCIILKD 655
Query: 47 GQIS-GKVLVYRNPGL 3
GQ+S KVLVYRNPGL
Sbjct: 656 GQVSWEKVLVYRNPGL 671
>ref|XP_006451271.1| hypothetical protein CICLE_v10007331mg [Citrus clementina]
gi|568843309|ref|XP_006475556.1| PREDICTED: probable
RNA-dependent RNA polymerase 3-like isoform X1 [Citrus
sinensis] gi|557554497|gb|ESR64511.1| hypothetical
protein CICLE_v10007331mg [Citrus clementina]
Length = 1015
Score = 183 bits (464), Expect = 2e-44
Identities = 92/136 (67%), Positives = 114/136 (83%), Gaps = 2/136 (1%)
Frame = -3
Query: 404 LSKYLIALLNYGGVPNQYFMDLLSNALKDAQNVRCNKRTALKVSLRYGEMD-DFLVSRML 228
LS+ LIALL+YGGVP +F+D+L NAL DA+ V NKR ALKVS YG MD DF +RM+
Sbjct: 538 LSRNLIALLSYGGVPEIFFLDILRNALDDARGVFSNKRNALKVSFNYGGMDYDFTSARMI 597
Query: 227 LCGIPLDEPYLQYRLSVLIREERKALKGGKIPISESYYLMGTADPTGLLKTDEVCIILAD 48
L GI LDEPYLQ+RLS+L++EE+K+L+ GK+P++ESYYLMGT DPTG+LK++EVCIIL D
Sbjct: 598 LSGISLDEPYLQHRLSILMKEEKKSLQAGKLPVTESYYLMGTVDPTGILKSNEVCIILKD 657
Query: 47 GQIS-GKVLVYRNPGL 3
GQ+S KVLVYRNPGL
Sbjct: 658 GQVSWEKVLVYRNPGL 673
>ref|NP_179583.3| probable RNA-dependent RNA polymerase 5 [Arabidopsis thaliana]
gi|322967572|sp|O82188.2|RDR5_ARATH RecName:
Full=Probable RNA-dependent RNA polymerase 5;
Short=AtRDRP5; AltName: Full=RNA-directed RNA polymerase
5 gi|330251850|gb|AEC06944.1| probable RNA-dependent RNA
polymerase 5 [Arabidopsis thaliana]
Length = 977
Score = 178 bits (452), Expect = 6e-43
Identities = 82/134 (61%), Positives = 110/134 (82%)
Frame = -3
Query: 404 LSKYLIALLNYGGVPNQYFMDLLSNALKDAQNVRCNKRTALKVSLRYGEMDDFLVSRMLL 225
LSK L+ALL+YGG+PN++F+D+L N L++++++ NKR AL +L YGEMDD ++M+L
Sbjct: 504 LSKNLVALLSYGGIPNEFFLDILLNTLEESKSIFYNKRAALNAALNYGEMDDQNAAQMIL 563
Query: 224 CGIPLDEPYLQYRLSVLIREERKALKGGKIPISESYYLMGTADPTGLLKTDEVCIILADG 45
GIPLDEP+L+ LS+L++ E+ LK GK+P++ESYYLMGT DPTG LK DEVC+IL G
Sbjct: 564 VGIPLDEPHLKNYLSILLKTEKNDLKAGKLPVTESYYLMGTVDPTGALKEDEVCVILESG 623
Query: 44 QISGKVLVYRNPGL 3
QISG+VLVYRNPGL
Sbjct: 624 QISGEVLVYRNPGL 637
>emb|CAN71520.1| hypothetical protein VITISV_042316 [Vitis vinifera]
Length = 1202
Score = 177 bits (449), Expect = 1e-42
Identities = 84/134 (62%), Positives = 112/134 (83%)
Frame = -3
Query: 404 LSKYLIALLNYGGVPNQYFMDLLSNALKDAQNVRCNKRTALKVSLRYGEMDDFLVSRMLL 225
LSKYLIALL+YGGVPN+YFM+LL +AL+DA +V+ +SLR+ EMDD +V+RM+L
Sbjct: 791 LSKYLIALLSYGGVPNEYFMNLLKDALEDAPSVQ-------SISLRFDEMDDSIVTRMIL 843
Query: 224 CGIPLDEPYLQYRLSVLIREERKALKGGKIPISESYYLMGTADPTGLLKTDEVCIILADG 45
GIP+DEP+LQ+RLS ++ EERK L+ GK+P+++ +YLMGTADPTG LK+DEVCIIL G
Sbjct: 844 SGIPIDEPFLQHRLSFMVNEERKGLRVGKLPVNDCFYLMGTADPTGKLKSDEVCIILDHG 903
Query: 44 QISGKVLVYRNPGL 3
Q+ G+VLVY++PGL
Sbjct: 904 QVQGRVLVYKHPGL 917
>ref|XP_002883963.1| RNA-dependent RNA polymerase family protein [Arabidopsis lyrata
subsp. lyrata] gi|297329803|gb|EFH60222.1| RNA-dependent
RNA polymerase family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 981
Score = 177 bits (448), Expect = 2e-42
Identities = 81/134 (60%), Positives = 110/134 (82%)
Frame = -3
Query: 404 LSKYLIALLNYGGVPNQYFMDLLSNALKDAQNVRCNKRTALKVSLRYGEMDDFLVSRMLL 225
LSK L+ALL+YGG+PN++F+D+L N L++++++ NK AL V+L YGEMDD ++M+L
Sbjct: 508 LSKNLVALLSYGGIPNEFFLDILLNTLEESKSIFYNKHAALNVALNYGEMDDQNAAQMIL 567
Query: 224 CGIPLDEPYLQYRLSVLIREERKALKGGKIPISESYYLMGTADPTGLLKTDEVCIILADG 45
GIPLDEP+L+ LS+L++ E+ LK G++P++ESYYLMGT DPTG LK DEVC+IL G
Sbjct: 568 VGIPLDEPHLKNHLSILLKTEKNDLKAGRLPVTESYYLMGTVDPTGELKEDEVCVILESG 627
Query: 44 QISGKVLVYRNPGL 3
QISG+VLVYRNPGL
Sbjct: 628 QISGEVLVYRNPGL 641
>gb|EYU30717.1| hypothetical protein MIMGU_mgv1a001145mg [Mimulus guttatus]
Length = 878
Score = 175 bits (444), Expect = 5e-42
Identities = 85/136 (62%), Positives = 109/136 (80%), Gaps = 1/136 (0%)
Frame = -3
Query: 407 CLSKYLIALLNYGGVPNQYFMDLLSNALKDAQNVRCNKRTALKVSLRYGEMD-DFLVSRM 231
CLSKYLIALL+YGGVP ++F++L++N L+DA+NV N+R AL+V+ + +D FL RM
Sbjct: 427 CLSKYLIALLSYGGVPQEFFLNLVANTLEDARNVYTNRRAALRVASNHAGLDYGFLAQRM 486
Query: 230 LLCGIPLDEPYLQYRLSVLIREERKALKGGKIPISESYYLMGTADPTGLLKTDEVCIILA 51
+ G+PLDEPYLQ LS L E+ LK GKIP++ES+YLMGTADPTG+L DEVC+IL
Sbjct: 487 ICSGVPLDEPYLQLCLSNLENGEKTKLKTGKIPLNESFYLMGTADPTGVLNNDEVCVILG 546
Query: 50 DGQISGKVLVYRNPGL 3
+GQISGKVLVYRNPG+
Sbjct: 547 NGQISGKVLVYRNPGM 562
>gb|EXB59780.1| putative RNA-dependent RNA polymerase 3 [Morus notabilis]
Length = 521
Score = 173 bits (439), Expect = 2e-41
Identities = 83/136 (61%), Positives = 113/136 (83%), Gaps = 1/136 (0%)
Frame = -3
Query: 407 CLSKYLIALLNYGGVPNQYFMDLLSNALKDAQNVRCNKRTALKVSLRYGEMDD-FLVSRM 231
CLS+ LIALL++GGVP+ YF LL NAL+++ +KRTA++V++ G +DD V+RM
Sbjct: 27 CLSRCLIALLSHGGVPDDYFKGLLWNALRESHGAFNDKRTAIRVAINRGSIDDDSTVARM 86
Query: 230 LLCGIPLDEPYLQYRLSVLIREERKALKGGKIPISESYYLMGTADPTGLLKTDEVCIILA 51
+L GIPL+EPYLQ+RL VL++EERK+L+GG++ + + +YLMGTADPTG L+ DEVCI+LA
Sbjct: 87 ILSGIPLEEPYLQHRLFVLVKEERKSLRGGRLHVDDCFYLMGTADPTGKLEHDEVCIVLA 146
Query: 50 DGQISGKVLVYRNPGL 3
+GQ+SGKVLVYRNPGL
Sbjct: 147 NGQVSGKVLVYRNPGL 162
>ref|XP_006853665.1| hypothetical protein AMTR_s00056p00110240 [Amborella trichopoda]
gi|548857326|gb|ERN15132.1| hypothetical protein
AMTR_s00056p00110240 [Amborella trichopoda]
Length = 988
Score = 173 bits (438), Expect = 3e-41
Identities = 86/135 (63%), Positives = 109/135 (80%), Gaps = 1/135 (0%)
Frame = -3
Query: 404 LSKYLIALLNYGGVPNQYFMDLLSNALKDAQNVRCNKRTALKVSLRYGEM-DDFLVSRML 228
LS+YLI LL++GGVP FM L+ AL D QNVR +K+ AL +++Y E+ D+ LV+RM+
Sbjct: 516 LSRYLITLLSHGGVPKSCFMFLIQAALDDVQNVRYSKKLALTAAVKYQEISDNLLVARMI 575
Query: 227 LCGIPLDEPYLQYRLSVLIREERKALKGGKIPISESYYLMGTADPTGLLKTDEVCIILAD 48
CG+PL+EPYLQ+RLS+L++EERK LK GK+ + SYYLMGTADPTG LK +EVCIIL
Sbjct: 576 FCGLPLEEPYLQHRLSILMKEERKGLKEGKVLLPNSYYLMGTADPTGKLKGNEVCIILDH 635
Query: 47 GQISGKVLVYRNPGL 3
GQISGKVLVYR+PGL
Sbjct: 636 GQISGKVLVYRHPGL 650
>ref|XP_006408908.1| hypothetical protein EUTSA_v10001897mg [Eutrema salsugineum]
gi|557110064|gb|ESQ50361.1| hypothetical protein
EUTSA_v10001897mg [Eutrema salsugineum]
Length = 988
Score = 171 bits (432), Expect = 1e-40
Identities = 80/134 (59%), Positives = 107/134 (79%)
Frame = -3
Query: 404 LSKYLIALLNYGGVPNQYFMDLLSNALKDAQNVRCNKRTALKVSLRYGEMDDFLVSRMLL 225
LS+ L+ALL+YGGVPN++F+DLL N +++ + + NKR ALK +L +G+MDD ++M+L
Sbjct: 516 LSRNLVALLSYGGVPNEFFLDLLLNTMEETKTIFNNKRAALKAALNHGDMDDQNAAQMIL 575
Query: 224 CGIPLDEPYLQYRLSVLIREERKALKGGKIPISESYYLMGTADPTGLLKTDEVCIILADG 45
GIPLDEP+L+ RLS+L E+ LK G++P++ESYYLMGT DPTG LK DEVC+IL G
Sbjct: 576 VGIPLDEPHLKDRLSILSNIEKNDLKAGRLPVTESYYLMGTVDPTGELKEDEVCVILESG 635
Query: 44 QISGKVLVYRNPGL 3
QISG VLVYRNPG+
Sbjct: 636 QISGDVLVYRNPGV 649
>ref|XP_007152979.1| hypothetical protein PHAVU_004G1764001g, partial [Phaseolus
vulgaris] gi|561026288|gb|ESW24973.1| hypothetical
protein PHAVU_004G1764001g, partial [Phaseolus vulgaris]
Length = 689
Score = 170 bits (430), Expect = 2e-40
Identities = 81/134 (60%), Positives = 106/134 (79%)
Frame = -3
Query: 404 LSKYLIALLNYGGVPNQYFMDLLSNALKDAQNVRCNKRTALKVSLRYGEMDDFLVSRMLL 225
LSK LIALL+YGGVPN++F LL + L++A +V NKR AL+ S+ +G MD++ + M+L
Sbjct: 498 LSKNLIALLSYGGVPNEFFKSLLESNLEEANHVFSNKRVALRASVNHGNMDEYNAAGMIL 557
Query: 224 CGIPLDEPYLQYRLSVLIREERKALKGGKIPISESYYLMGTADPTGLLKTDEVCIILADG 45
CGIP DEP+LQYRLS+L REE+K L+GGK+ I + +YLMGT DPTG L+ +VCII +G
Sbjct: 558 CGIPQDEPFLQYRLSILAREEKKKLRGGKLYIPDCFYLMGTVDPTGCLEKGQVCIIHQNG 617
Query: 44 QISGKVLVYRNPGL 3
QI+G VLVYRNPGL
Sbjct: 618 QITGDVLVYRNPGL 631
>ref|XP_006296906.1| hypothetical protein CARUB_v10012898mg [Capsella rubella]
gi|482565615|gb|EOA29804.1| hypothetical protein
CARUB_v10012898mg [Capsella rubella]
Length = 982
Score = 169 bits (428), Expect = 4e-40
Identities = 78/134 (58%), Positives = 107/134 (79%)
Frame = -3
Query: 404 LSKYLIALLNYGGVPNQYFMDLLSNALKDAQNVRCNKRTALKVSLRYGEMDDFLVSRMLL 225
LS+ L+ALL+YGG+P+++F+D+L N L++++ + NKR AL +L YGEMDD ++M+L
Sbjct: 511 LSRNLVALLSYGGIPDEFFLDILHNTLEESKAIFYNKRAALNAALSYGEMDDQNAAQMIL 570
Query: 224 CGIPLDEPYLQYRLSVLIREERKALKGGKIPISESYYLMGTADPTGLLKTDEVCIILADG 45
GIPLDEP+L+ LS ++ E+ LK G++P++ESYYLMGT DPTG LK DEVC+IL G
Sbjct: 571 AGIPLDEPHLKTCLSSFLKREKNDLKAGRLPVTESYYLMGTVDPTGELKEDEVCVILESG 630
Query: 44 QISGKVLVYRNPGL 3
QISG+VLVYRNPGL
Sbjct: 631 QISGEVLVYRNPGL 644
>gb|AHL27588.1| RNA-dependent RNA polymerase 5 [Salvia miltiorrhiza]
Length = 898
Score = 168 bits (425), Expect = 8e-40
Identities = 82/135 (60%), Positives = 105/135 (77%), Gaps = 1/135 (0%)
Frame = -3
Query: 404 LSKYLIALLNYGGVPNQYFMDLLSNALKDAQNVRCNKRTALKVSLRYGEMD-DFLVSRML 228
LSKYLI+LL+YGGVP ++F++LL AL++ QNV N+R AL+V+ + + D + RM+
Sbjct: 520 LSKYLISLLSYGGVPQEFFLNLLFKALEETQNVYSNRRVALRVASHHDDWDLGLMAQRMI 579
Query: 227 LCGIPLDEPYLQYRLSVLIREERKALKGGKIPISESYYLMGTADPTGLLKTDEVCIILAD 48
CGIPLDEPYLQ+ LS L ++K LK G+IP+ ES YLMGTADPTG+L DEVC+IL
Sbjct: 580 CCGIPLDEPYLQHCLSKLESSQKKKLKEGRIPVDESCYLMGTADPTGVLHNDEVCVILDS 639
Query: 47 GQISGKVLVYRNPGL 3
GQISGKVLVYRNPG+
Sbjct: 640 GQISGKVLVYRNPGM 654
>ref|XP_006408907.1| hypothetical protein EUTSA_v10001896mg [Eutrema salsugineum]
gi|557110063|gb|ESQ50360.1| hypothetical protein
EUTSA_v10001896mg [Eutrema salsugineum]
Length = 988
Score = 167 bits (423), Expect = 1e-39
Identities = 78/134 (58%), Positives = 106/134 (79%)
Frame = -3
Query: 404 LSKYLIALLNYGGVPNQYFMDLLSNALKDAQNVRCNKRTALKVSLRYGEMDDFLVSRMLL 225
LS+ L+ALL+YGGVPN +F+D+L N L++++ + NKR+ALK +L YG+MDD ++M+L
Sbjct: 498 LSRNLVALLSYGGVPNDFFLDILRNTLENSKTIFQNKRSALKAALNYGDMDDQNAAQMIL 557
Query: 224 CGIPLDEPYLQYRLSVLIREERKALKGGKIPISESYYLMGTADPTGLLKTDEVCIILADG 45
GIPLDEP+L+ LS+L+ E+ LK G++P++ESYYLMGT DPT LK +EVC+IL G
Sbjct: 558 VGIPLDEPHLKDHLSILLHTEKNDLKAGRLPVTESYYLMGTVDPTRKLKENEVCVILESG 617
Query: 44 QISGKVLVYRNPGL 3
QISG VLVY NPGL
Sbjct: 618 QISGDVLVYMNPGL 631
>ref|XP_006338861.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Solanum
tuberosum]
Length = 911
Score = 167 bits (422), Expect = 2e-39
Identities = 84/135 (62%), Positives = 110/135 (81%), Gaps = 1/135 (0%)
Frame = -3
Query: 404 LSKYLIALLNYGGVPNQYFMDLLSNALKDAQNVRCNKRTALKVSLRYGEMDD-FLVSRML 228
LSK LI+LL+YGGV +YFM+LL +AL++ + V KR ALKV + Y EMDD L +RM+
Sbjct: 539 LSKNLISLLSYGGVQKEYFMELLGSALEETKQVYLRKRAALKVVINYREMDDDCLTARMI 598
Query: 227 LCGIPLDEPYLQYRLSVLIREERKALKGGKIPISESYYLMGTADPTGLLKTDEVCIILAD 48
GIPL+EP+L+ RLS L + ER L+GGK+PIS+S+YLMGTADPTG+L+++EVC+IL +
Sbjct: 599 SSGIPLNEPHLRARLSRLAKIERTKLRGGKLPISDSFYLMGTADPTGVLESNEVCVILDN 658
Query: 47 GQISGKVLVYRNPGL 3
GQISG+VLVYRNPGL
Sbjct: 659 GQISGRVLVYRNPGL 673