BLASTX nr result
ID: Sinomenium21_contig00030138
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00030138
(1183 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004305427.1| PREDICTED: double-stranded RNA-binding prote... 196 2e-47
ref|XP_007030026.1| Double-stranded-RNA-binding protein 4, putat... 195 3e-47
ref|XP_007151497.1| hypothetical protein PHAVU_004G051700g [Phas... 187 8e-45
ref|XP_002319708.2| hypothetical protein POPTR_0013s05820g [Popu... 187 8e-45
ref|XP_004489681.1| PREDICTED: double-stranded RNA-binding prote... 187 8e-45
ref|XP_006443467.1| hypothetical protein CICLE_v10020214mg [Citr... 184 8e-44
ref|XP_006371174.1| hypothetical protein POPTR_0019s05380g [Popu... 181 5e-43
ref|XP_007198871.1| hypothetical protein PRUPE_ppa021309mg [Prun... 181 5e-43
ref|XP_004288491.1| PREDICTED: double-stranded RNA-binding prote... 180 1e-42
ref|XP_004229058.1| PREDICTED: double-stranded RNA-binding prote... 172 3e-40
ref|XP_006346553.1| PREDICTED: double-stranded RNA-binding prote... 170 1e-39
gb|EXB31234.1| Double-stranded RNA-binding protein 4 [Morus nota... 169 3e-39
ref|XP_002325855.2| hypothetical protein POPTR_0019s05420g [Popu... 164 7e-38
sp|Q5N8Z0.1|DRB1_ORYSJ RecName: Full=Double-stranded RNA-binding... 160 1e-36
emb|CBI31232.3| unnamed protein product [Vitis vinifera] 157 1e-35
ref|XP_006291418.1| hypothetical protein CARUB_v10017556mg [Caps... 156 2e-35
ref|XP_004141127.1| PREDICTED: uncharacterized protein LOC101222... 154 7e-35
ref|XP_004170549.1| PREDICTED: double-stranded RNA-binding prote... 153 1e-34
ref|XP_002313634.2| hypothetical protein POPTR_0009s15500g [Popu... 147 7e-33
ref|XP_006446420.1| hypothetical protein CICLE_v10018273mg [Citr... 146 2e-32
>ref|XP_004305427.1| PREDICTED: double-stranded RNA-binding protein 1-like [Fragaria vesca
subsp. vesca]
Length = 446
Score = 196 bits (497), Expect = 2e-47
Identities = 125/333 (37%), Positives = 168/333 (50%), Gaps = 13/333 (3%)
Frame = -3
Query: 980 YKNELQNYAMKRNLNSPVYSCKREGPPHAIRFKASVTIDGKTFESPELFRTXXXXXXXXX 801
+KN+LQ YA KRNLN PVYSC+REGPPHA RFK +VTIDG+T++ E T
Sbjct: 126 HKNQLQYYAQKRNLNLPVYSCEREGPPHAARFKCTVTIDGQTYQGQEFLPTVKDAEHAAA 185
Query: 800 XXXXXXXXEDGIQEEDSSFYKNLLQDLAQKEGFPLPNYVTVSSGPSHIPTFACTVEIQGD 621
+G+QE+D+ YKNLLQ+L QKEG +P Y T +SG H+P F TVEI G+
Sbjct: 186 KVALISLLPNGVQEDDTGLYKNLLQELLQKEGQHVPLYSTTTSGEPHMPRFVSTVEIGGE 245
Query: 620 SFQGTAAKSKKQAEINAAKVAYYSLEER------------SHAKEAHERVSSSSPQIVII 477
F G A+SKK AE++AAKVAY +L +R + + E +SS +P +V
Sbjct: 246 YFTGEVARSKKLAEVSAAKVAYNTLRDRKLSHIPLFPTPATEGQVCSELLSSKAPSVVAA 305
Query: 476 DFEKDLDPRDTMNSTRSLGSLELSEVNEVIDQELQSAEMITASANSSSQSHLKPGTNSTP 297
D ++ + P NS + +E +S + A S + G S
Sbjct: 306 DLQQQMRPNTIPNS---------------VKREPESEMSVAAVGTSRQGTTPSLGVISVT 350
Query: 296 RNGDSSDEVYAKLRDPFPSIPTSPEDGKSSPST-GSECSDDAVTNLNNNLSSETRSSLLC 120
G S+ R P S SPE ST S+ + D + L E +
Sbjct: 351 VGGGSTLSGTVHARQPETSRSASPEPQNDLFSTLASDYNSDVDSTL------EPAAKRFF 404
Query: 119 NNNIQVFPRVPGIKLPEDTTVLPISDDKWVAVS 21
+N + V PR+ LPED VLP SD+ WVAVS
Sbjct: 405 SNKVSVHPRM-AAALPEDCIVLPFSDENWVAVS 436
>ref|XP_007030026.1| Double-stranded-RNA-binding protein 4, putative [Theobroma cacao]
gi|508718631|gb|EOY10528.1| Double-stranded-RNA-binding
protein 4, putative [Theobroma cacao]
Length = 448
Score = 195 bits (496), Expect = 3e-47
Identities = 134/397 (33%), Positives = 193/397 (48%), Gaps = 29/397 (7%)
Frame = -3
Query: 1130 SSSTNAVLNSDPSEKGVMLQKNPEISKSSTMHVDGPAVKGHKEHGELLHIYKNELQNYAM 951
SS+ A +S+ + + E ++ S ++ G K + ++ H+YKN+LQ +A
Sbjct: 78 SSNVTANFDSNIENRRTVQPGRQETNRLSQVNETGSVCKDNHRVKDIQHLYKNQLQVFAR 137
Query: 950 KRNLNSPVYSCKREGPPHAIRFKASVTIDGKTFESPELFRTXXXXXXXXXXXXXXXXXED 771
KRN++ PVYSC+ EGPPHA RF+ VT + +T+ES E F T D
Sbjct: 138 KRNVDLPVYSCECEGPPHASRFRCKVTFNEQTYESLEFFPTIKEAEHAAAKIALSSLSPD 197
Query: 770 GIQEEDSSFYKNLLQDLAQKEGFPLPNYVTVSSGPSHIPTFACTVEIQGDSFQGTAAKSK 591
QEED SFYKNLLQ+L QKEG PLP Y T SG +H TF VE++G+ F G AK+K
Sbjct: 198 AFQEEDFSFYKNLLQELTQKEGCPLPVYTTTRSGEAHASTFVSIVEVKGNVFTGQEAKTK 257
Query: 590 KQAEINAAKVAYYSLEERSHAKEAHERVSSSSPQIVIIDFEKDLDPRDTMNSTRSLGSLE 411
K AE+ AAKVAY L+ER S+ ++ +++ P +++ +RS
Sbjct: 258 KHAEVLAAKVAYMKLKERK---------SNRGSMVINPAYQERQVPVLSLSHSRS----- 303
Query: 410 LSEVNEVIDQELQSAEMITASANSSSQSHLKP------GTNSTPRNGDSSDEVYAKLRD- 252
+ N+ +Q + P +ST R D VY R+
Sbjct: 304 --------------------NVNADTQQNFGPKACTLFNPSSTTREDQHEDIVYGTFRNH 343
Query: 251 ----PFPSIPTSPEDGKSSPSTGS------ECSDDAVTNLNNNLSSETRS---------- 132
PFP P D +SS ST S D +++NL +N S+ T S
Sbjct: 344 LLSIPFPQ-PEMTTDWQSSSSTSSLYDPLLPEDDLSMSNLPSNHSATTNSVTNSITMEPV 402
Query: 131 --SLLCNNNIQVFPRVPGIKLPEDTTVLPISDDKWVA 27
S + N + V PRVP + P +T+LP+SD+ WVA
Sbjct: 403 AMSTVPCNKVIVHPRVPNLNFPAGSTLLPMSDENWVA 439
>ref|XP_007151497.1| hypothetical protein PHAVU_004G051700g [Phaseolus vulgaris]
gi|561024806|gb|ESW23491.1| hypothetical protein
PHAVU_004G051700g [Phaseolus vulgaris]
Length = 480
Score = 187 bits (475), Expect = 8e-45
Identities = 115/329 (34%), Positives = 171/329 (51%)
Frame = -3
Query: 1007 KEHGELLHIYKNELQNYAMKRNLNSPVYSCKREGPPHAIRFKASVTIDGKTFESPELFRT 828
K+ +LH+YKN+LQ++A K+NL PVYS + EGPPHA+ FK VTIDG T+ES +L+ T
Sbjct: 174 KDQKNMLHLYKNQLQSFAQKKNLGLPVYSSEWEGPPHAMCFKCKVTIDGHTYESDKLYST 233
Query: 827 XXXXXXXXXXXXXXXXXEDGIQEEDSSFYKNLLQDLAQKEGFPLPNYVTVSSGPSHIPTF 648
G QE + YKNLLQ+LAQKEGF LP Y T G +H+P F
Sbjct: 234 LKDAEHAAAEAALMSLSPGGDQEAHAGLYKNLLQELAQKEGFQLPIYSTNKKGEAHMPIF 293
Query: 647 ACTVEIQGDSFQGTAAKSKKQAEINAAKVAYYSLEERSHAKEAHERVSSSSPQIVIIDFE 468
V+++G F G AKSKKQAE++AAKVAY +L+E + S+ + I++F
Sbjct: 294 VSHVKVEGGLFTGQEAKSKKQAEMSAAKVAYMALKEHGGKSDKSSSFPFSNYEGQILEFS 353
Query: 467 KDLDPRDTMNSTRSLGSLELSEVNEVIDQELQSAEMITASANSSSQSHLKPGTNSTPRNG 288
D + ++ + + S ++ + +S + + + SS S NG
Sbjct: 354 PDHSESNGVSGLKRNANPNSSVGLGLVTWKERSKDTLKNVSTSSGNS-----------NG 402
Query: 287 DSSDEVYAKLRDPFPSIPTSPEDGKSSPSTGSECSDDAVTNLNNNLSSETRSSLLCNNNI 108
+ D + +G+SSPS S V++ ++ S+ ++ C I
Sbjct: 403 CTEDSTLS--------------NGRSSPSLSG--STKMVSDTSDKSSTAVNTTSSCTKKI 446
Query: 107 QVFPRVPGIKLPEDTTVLPISDDKWVAVS 21
V+ R +K+ + T+LPISDDKWVA S
Sbjct: 447 IVYSRKTNVKIEDGGTLLPISDDKWVAYS 475
>ref|XP_002319708.2| hypothetical protein POPTR_0013s05820g [Populus trichocarpa]
gi|550325051|gb|EEE95631.2| hypothetical protein
POPTR_0013s05820g [Populus trichocarpa]
Length = 353
Score = 187 bits (475), Expect = 8e-45
Identities = 122/346 (35%), Positives = 183/346 (52%), Gaps = 26/346 (7%)
Frame = -3
Query: 983 IYKNELQNYAMKRNLNSPVYSCKREGPPHAIRFKASVTIDGKTFESPELFRTXXXXXXXX 804
++K++LQ YA KRN PVYSC+R GPPH+ RFK VT++G+TFES E F T
Sbjct: 10 LFKSQLQTYAQKRNFALPVYSCERVGPPHSSRFKCKVTVNGQTFESLEYFSTLNKAEHAA 69
Query: 803 XXXXXXXXXEDGIQEEDSSFYKNLLQDLAQKEGFPLPNYVTVSSGPSHIPTFACTVEIQG 624
+G+ EED S YKNLLQ+LAQ+EG LP Y T SG +H+PTF TVEI+G
Sbjct: 70 AKAALMSLLPNGV-EEDESGYKNLLQELAQREGCGLPTYSTNKSGEAHVPTFISTVEIEG 128
Query: 623 DSFQGTAAKSKKQAEINAAKVAYYSLEERSHAKEAHERVSSSSPQIVIIDFEKDLDPRDT 444
+ F G AK+KKQAE++AAK AY +L++R+ SS SP ++ + P+ +
Sbjct: 129 EIFTGQGAKTKKQAEMSAAKTAYTALKQRN---------SSPSPAVLSPACQFQEAPQSS 179
Query: 443 MNSTRSL---GSLELSEVNEVIDQELQSAEMITASANSSSQSHLKPGTN---STPRNGDS 282
T + +++ + + + Q ++ + T S + ++L+ P D
Sbjct: 180 TLLTPACQVQEAVQSTTCHSLAHQGHEALQFSTPSLLADLTAYLQQNIQPKLPVPSEQDE 239
Query: 281 SDEVYAKLRDPFPSIPTSPEDGKSSPSTGSECSDDAVTNL------------NNNLSSET 138
D +++R P I +S +D S+ ++ + S A+++L +++ SS
Sbjct: 240 EDRACSEVRSRHPFIASSGQDSVSAVTSITSLSGVAISSLPKHDLSSSSLPSDSSTSSAA 299
Query: 137 RSSL--------LCNNNIQVFPRVPGIKLPEDTTVLPISDDKWVAV 24
SS+ C + I V PR + P TTVLPISD WVAV
Sbjct: 300 NSSIEHLVGRSTTCQSRIIVHPRGATVTYPSGTTVLPISDGNWVAV 345
>ref|XP_004489681.1| PREDICTED: double-stranded RNA-binding protein 1-like [Cicer
arietinum]
Length = 455
Score = 187 bits (475), Expect = 8e-45
Identities = 128/375 (34%), Positives = 179/375 (47%), Gaps = 13/375 (3%)
Frame = -3
Query: 1106 NSDPSEKGVMLQKNPEISKSSTMHVDGPAVKGHKEHGELLHIYKNELQNYAMKRNLNSPV 927
N D K + +IS + T DG + K ++H+YKN+LQNYA KRNLN P
Sbjct: 127 NRDLQPKSEVACPTSQISSTVT---DGVKAQDTKS---IIHLYKNQLQNYAQKRNLNLPE 180
Query: 926 YSCKREGPPHAIRFKASVTIDGKTFESPELFRTXXXXXXXXXXXXXXXXXEDGIQEEDSS 747
YS + EGPPHA+RF+ VTIDG+TFE P+ + T G+QE+D
Sbjct: 181 YSSEWEGPPHAMRFRCKVTIDGQTFECPKFYSTLKDAEHAAAEFAFMSLSPSGVQEDDIV 240
Query: 746 FYKNLLQDLAQKEGFPLPNYVTVSSGPSHIPTFACTVEIQGDSFQGTAAKSKKQAEINAA 567
YKNLLQ+L QKEGF LP Y T SG +H PTF VE++G+ F G AKSKKQAE++AA
Sbjct: 241 VYKNLLQELVQKEGFHLPVYSTNKSGEAHKPTFTSQVEVEGEVFTGQEAKSKKQAEMSAA 300
Query: 566 KVAYYSLEERSHAKEAHERV-------------SSSSPQIVIIDFEKDLDPRDTMNSTRS 426
KVAY L+ER E V S S VI D + D DP +S
Sbjct: 301 KVAYTILKERKGESEPSSSVPLSARQGQASYFPSDHSESNVITDLQHDADP-------KS 353
Query: 425 LGSLELSEVNEVIDQELQSAEMITASANSSSQSHLKPGTNSTPRNGDSSDEVYAKLRDPF 246
L L L N+ +L+ +M+++S +S S+ + P DS++ +
Sbjct: 354 LVRLGLVTCNQPNKDKLE--KMLSSSGSSRSRDSSSLKCKAIPSFSDSNNVDFEV----- 406
Query: 245 PSIPTSPEDGKSSPSTGSECSDDAVTNLNNNLSSETRSSLLCNNNIQVFPRVPGIKLPED 66
+N SS S+ + ++ R +++
Sbjct: 407 -----------------------------SNTSSTAVSTPSRRKKVVIYSRKTNVEIENG 437
Query: 65 TTVLPISDDKWVAVS 21
++PI+DDKW+A S
Sbjct: 438 GAMMPINDDKWIAYS 452
>ref|XP_006443467.1| hypothetical protein CICLE_v10020214mg [Citrus clementina]
gi|568850926|ref|XP_006479147.1| PREDICTED:
double-stranded RNA-binding protein 1-like [Citrus
sinensis] gi|557545729|gb|ESR56707.1| hypothetical
protein CICLE_v10020214mg [Citrus clementina]
Length = 434
Score = 184 bits (466), Expect = 8e-44
Identities = 133/377 (35%), Positives = 190/377 (50%), Gaps = 10/377 (2%)
Frame = -3
Query: 1127 SSTNAVLNSDPSEKGVMLQKNP-EISKSSTMHVDGPAVKGHKEHGELLHIYKNELQNYAM 951
SST A +S+ S +Q N E +++ ++ V + ++ H+YKN+LQ+Y
Sbjct: 75 SSTPAASSSNGSSSESAVQVNARETDRTTQVNATISTVNDVHKSRDMQHLYKNQLQSYTQ 134
Query: 950 KRNLNSPVYSCKREGPPHAIRFKASVTIDGKTFESPELFRTXXXXXXXXXXXXXXXXXED 771
K+NL P+YSC+REGPPHA RFK VTIDG+T+ES + F T D
Sbjct: 135 KKNLPLPMYSCEREGPPHASRFKCKVTIDGQTYESHQFFPTLKDAEHEAAKVALMSLSLD 194
Query: 770 GIQEEDSSFYKNLLQDLAQKEGFPLPNYVTVSSGPSHIPTFACTVEIQGDSFQGTAAKSK 591
Q++DS YKNLLQ+LAQKE + LP Y T SG SH PTF TVE+ G F G AKSK
Sbjct: 195 KFQQDDSVLYKNLLQELAQKEAYALPVYNTKQSGESHAPTFVSTVEVGGQVFSGQEAKSK 254
Query: 590 KQAEINAAKVAYYSLEERSHAKEAHERVSSSSPQIVIIDFEKDLDPRDTMNSTRSLGSLE 411
KQAE++AAKVAY L+E + S P +V P + S SL+
Sbjct: 255 KQAEMSAAKVAYMRLKEPN---------PSQGPALV--------SPAIQAQADYSSSSLQ 297
Query: 410 LSEVNEVIDQELQSAEMITASANSSSQSHLKPGTNSTPRNGDSSDEVYAKLRDPFPSIPT 231
S V + +Q+A + + NS + + T N + + Y + P P +
Sbjct: 298 -SNVTADLHHNVQTAGRMVFNPNSMPKVQAEEIRELTTVNTEVAG--YDLSQFPQPEFSS 354
Query: 230 SP--------EDGKSSPSTGSECS-DDAVTNLNNNLSSETRSSLLCNNNIQVFPRVPGIK 78
S E G S S EC+ D V + ++ ++ R+ + I+V P P +K
Sbjct: 355 SSDLSASSGVEKGMPSSSLPLECTVDPRVDPIAQSVRADGRTCKI----IRVRPNRPNMK 410
Query: 77 LPEDTTVLPISDDKWVA 27
PE ++VL D++WVA
Sbjct: 411 FPEGSSVLH-RDNQWVA 426
>ref|XP_006371174.1| hypothetical protein POPTR_0019s05380g [Populus trichocarpa]
gi|566232405|ref|XP_006371175.1| hypothetical protein
POPTR_0019s05380g [Populus trichocarpa]
gi|550316844|gb|ERP48971.1| hypothetical protein
POPTR_0019s05380g [Populus trichocarpa]
gi|550316845|gb|ERP48972.1| hypothetical protein
POPTR_0019s05380g [Populus trichocarpa]
Length = 480
Score = 181 bits (459), Expect = 5e-43
Identities = 135/381 (35%), Positives = 187/381 (49%), Gaps = 27/381 (7%)
Frame = -3
Query: 1085 GVMLQKNPEISKSSTMHVDGPA-VKGHKEHGELLHIYKNELQNYAMKRNLNSPVYSCKRE 909
G LQ N + + + + + A K + G + H++KN+LQ YA KRN PVYSC+R
Sbjct: 119 GGKLQLNLQDANPTPLSNEAVANAKNDEIFGGMQHLFKNQLQTYAQKRNFTLPVYSCERV 178
Query: 908 GPPHAIRFKASVTIDGKTFESPELFRTXXXXXXXXXXXXXXXXXEDGIQEEDSSFYKNLL 729
GPPHA RFK VT++G+T+ES E F T +G+ EED YK+LL
Sbjct: 179 GPPHASRFKCKVTVNGQTYESQEYFPTLNKAELAAAKAALMSLLSNGV-EEDGFGYKSLL 237
Query: 728 QDLAQKEGFPLPNYVTVSSGPSHIPTFACTVEIQGDSFQGTAAKSKKQAEINAAKVAYYS 549
Q+LAQ+EG LP Y T SG +H+PTF VEI+G+ F G AK+KKQAE++AAK+AY +
Sbjct: 238 QELAQREGCGLPTYWTDKSGEAHVPTFVSKVEIEGEIFTGQGAKTKKQAEMSAAKIAYTA 297
Query: 548 LEER------------------------SHAKEAHERVSSSSPQIVIIDFEKDLDPRDTM 441
L++R S A+++ E V S +PQ + + L
Sbjct: 298 LQQRYSSQSPGFLSTSSQFQEAPRSSPLSPARQSQEAVQSETPQFSVSNLRAGLTAYLQQ 357
Query: 440 NSTRSLGSLELSEVNEVIDQELQSAEMITASANSSSQSHLKPGTNSTPRNGDSSDEVYAK 261
N +L NE E A + ++ N S S PG DS + +
Sbjct: 358 NI-----QPKLPVSNE--QAEEYRANSVVSNHNPSIAS---PGQ-------DSCSAMASI 400
Query: 260 LRDPFPSIPTSPEDGKSSPSTGSECSDDAVTNLNNNLSSETRSSLLCNNNIQVFPRVPGI 81
P +I +SP+ +S S S D+ TNL + S E I+V G
Sbjct: 401 TPSPAAAISSSPKHDLTSSSLPS----DSPTNLATSSSIE-----FMVRGIRVLMHPSGT 451
Query: 80 KL--PEDTTVLPISDDKWVAV 24
K+ P +TVLPISDDKW AV
Sbjct: 452 KMTYPAGSTVLPISDDKWAAV 472
>ref|XP_007198871.1| hypothetical protein PRUPE_ppa021309mg [Prunus persica]
gi|462394166|gb|EMJ00070.1| hypothetical protein
PRUPE_ppa021309mg [Prunus persica]
Length = 358
Score = 181 bits (459), Expect = 5e-43
Identities = 116/325 (35%), Positives = 163/325 (50%)
Frame = -3
Query: 995 ELLHIYKNELQNYAMKRNLNSPVYSCKREGPPHAIRFKASVTIDGKTFESPELFRTXXXX 816
++ H+YKN+LQ YA KRNL PVYSC+REG PHA RFK +VT+D T+E PE T
Sbjct: 95 DIQHLYKNQLQTYAQKRNLLLPVYSCEREGLPHANRFKCTVTVDEHTYEGPEFLPTMKEA 154
Query: 815 XXXXXXXXXXXXXEDGIQEEDSSFYKNLLQDLAQKEGFPLPNYVTVSSGPSHIPTFACTV 636
+G+QE+D YKN+LQ+L QKEGF +P Y T +SG H+P F TV
Sbjct: 155 EHAVAKVALMSLLPNGVQEDDIVLYKNVLQELIQKEGFSMPVYSTKNSGEVHMPIFVSTV 214
Query: 635 EIQGDSFQGTAAKSKKQAEINAAKVAYYSLEERSHAKEAHERVSSSSPQIVIIDFEKDLD 456
EI+G++F G+ A+SKKQAE++AAKVAY++L E + +H + SS
Sbjct: 215 EIEGETFTGSEARSKKQAEMSAAKVAYHTLRELTAEGNSHHPTTVSSRP----------- 263
Query: 455 PRDTMNSTRSLGSLELSEVNEVIDQELQSAEMITASANSSSQSHLKPGTNSTPRNGDSSD 276
D + ++ S ++ + S S++ S S +NG +S
Sbjct: 264 --DALTTSSGFSSFDI---------------LYGRSQESNNYS------LSLSQNGSTS- 299
Query: 275 EVYAKLRDPFPSIPTSPEDGKSSPSTGSECSDDAVTNLNNNLSSETRSSLLCNNNIQVFP 96
+ PS GS TNL + + E + N + V+P
Sbjct: 300 ---------------------TFPSVGS-------TNLAMDSTLEPPAKRSMYNKVSVYP 331
Query: 95 RVPGIKLPEDTTVLPISDDKWVAVS 21
+K PE TVLP+SD KWVA+S
Sbjct: 332 YKSDMKFPEGITVLPMSDGKWVALS 356
>ref|XP_004288491.1| PREDICTED: double-stranded RNA-binding protein 1-like [Fragaria vesca
subsp. vesca]
Length = 454
Score = 180 bits (456), Expect = 1e-42
Identities = 122/357 (34%), Positives = 177/357 (49%), Gaps = 20/357 (5%)
Frame = -3
Query: 1055 SKSSTMHVDGPAVKGHKEHGELLHIYKNELQNYAMKRNLNSPVYSCKREGPPHAIRFKAS 876
+ S++ VDG +H +KN+LQ YA KRNLN PVYSC+REGPPHA RFK +
Sbjct: 109 NSGSSLSVDGDNYSKDVQH------HKNQLQYYAQKRNLNLPVYSCEREGPPHATRFKCT 162
Query: 875 VTIDGKTFESPELFRTXXXXXXXXXXXXXXXXXEDGIQEEDSSFYKNLLQDLAQKEGFPL 696
VTIDG+T++ E T +G+Q++D+ YKNLLQ+L QKEG +
Sbjct: 163 VTIDGQTYQGQEFLPTVKDAEHAAAKVALISLLPNGVQQDDTGLYKNLLQELLQKEGQHV 222
Query: 695 PNYVTVSSGPSHIPTFACTVEIQGDSFQGTAAKSKKQAEINAAKVAYYSLEER--SH--- 531
P Y + +SG H+ F TVEI G+ F G A+SKK AE++AAKVAY +L +R SH
Sbjct: 223 PLYSSTTSGEPHMLRFVSTVEIGGEYFTGEVARSKKLAEVSAAKVAYNTLRDRKLSHIPL 282
Query: 530 -------AKEAHERVSSSSPQIVIIDFEKDLDPRDTM-NSTRSLGSLELSE-------VN 396
+ E +SS +P +V D ++ + P + NS + +L + +
Sbjct: 283 FPTPAIEGQVCSELLSSKAPSVVAADLQQQMRPNTPIPNSVKREPESDLQQQMRPDTPIP 342
Query: 395 EVIDQELQSAEMITASANSSSQSHLKPGTNSTPRNGDSSDEVYAKLRDPFPSIPTSPEDG 216
+ +E +S + S + G S G S+ R P S SP
Sbjct: 343 NSVKREPESEMSVATVGTSCLGTTPSLGVISVTVGGGSTLSGTVHARQPETSRSASP--- 399
Query: 215 KSSPSTGSECSDDAVTNLNNNLSSETRSSLLCNNNIQVFPRVPGIKLPEDTTVLPIS 45
+P GS + + N N + + E + +N + V PR+ LPED VLP+S
Sbjct: 400 --APQNGSFLTLASDCNSNADSTLEPPAKRFFSNKVSVLPRM-AATLPEDCVVLPLS 453
>ref|XP_004229058.1| PREDICTED: double-stranded RNA-binding protein 1-like [Solanum
lycopersicum]
Length = 417
Score = 172 bits (436), Expect = 3e-40
Identities = 120/372 (32%), Positives = 180/372 (48%), Gaps = 2/372 (0%)
Frame = -3
Query: 1130 SSSTNAVLNSDPSEKGVMLQKNPEISKSSTMHVDGPAVKGHKEHGE--LLHIYKNELQNY 957
++++ + P + Q+ I + S HV+G A+ + +LH+YK+ LQ+Y
Sbjct: 84 AATSKCKVGDRPPNMDIFQQRQNNIGQLS--HVNGTALASVDTNTSKGMLHLYKSRLQHY 141
Query: 956 AMKRNLNSPVYSCKREGPPHAIRFKASVTIDGKTFESPELFRTXXXXXXXXXXXXXXXXX 777
A K+NL PVYS + +GPPHA RF++ VTIDG T+E+ E F T
Sbjct: 142 AQKQNLTLPVYSSELDGPPHARRFRSKVTIDGVTYETQEFFSTLKEAEHAAAKVAFESLA 201
Query: 776 EDGIQEEDSSFYKNLLQDLAQKEGFPLPNYVTVSSGPSHIPTFACTVEIQGDSFQGTAAK 597
+ QE D YK LLQ+LAQKE P Y T +GP H P F VE+ +FQG AK
Sbjct: 202 LNDTQE-DEGLYKTLLQELAQKEALLFPVYDTARTGPPHAPVFRSMVEVGDRTFQGQEAK 260
Query: 596 SKKQAEINAAKVAYYSLEERSHAKEAHERVSSSSPQIVIIDFEKDLDPRDTMNSTRSLGS 417
+KKQAE+NAAKVAY +L + E + + SS +V +
Sbjct: 261 TKKQAEMNAAKVAYNALVKGGQLDEPLQVLPVSSKCVV-----------------ADVSL 303
Query: 416 LELSEVNEVIDQELQSAEMITASANSSSQSHLKPGTNSTPRNGDSSDEVYAKLRDPFPSI 237
L + + ++I +EL S + + TN+ S+ Y+ +RD P
Sbjct: 304 LVVQQKTKLIIEEL-------------SLQNEEADTNAKRHRCSSAPNTYSLIRDHRP-- 348
Query: 236 PTSPEDGKSSPSTGSECSDDAVTNLNNNLSSETRSSLLCNNNIQVFPRVPGIKLPEDTTV 57
++P S+ SD + +++ + T S+L + I +FPR + LP +V
Sbjct: 349 --------AAPFVASDSSDAVAESADSDTYAGT--SILPSEKIFIFPRKANMNLPSGASV 398
Query: 56 LPISDDKWVAVS 21
LP SD+KWVA S
Sbjct: 399 LPCSDEKWVAAS 410
>ref|XP_006346553.1| PREDICTED: double-stranded RNA-binding protein 1-like [Solanum
tuberosum]
Length = 427
Score = 170 bits (431), Expect = 1e-39
Identities = 116/370 (31%), Positives = 178/370 (48%)
Frame = -3
Query: 1130 SSSTNAVLNSDPSEKGVMLQKNPEISKSSTMHVDGPAVKGHKEHGELLHIYKNELQNYAM 951
+S++ + + P V Q+ I + S ++ A+ +LH+YK+ LQ+YA
Sbjct: 94 ASTSKSKVGDRPPNMDVFQQRQNNIGQLSHVNGTALAIVDTNTSKGMLHLYKSRLQHYAQ 153
Query: 950 KRNLNSPVYSCKREGPPHAIRFKASVTIDGKTFESPELFRTXXXXXXXXXXXXXXXXXED 771
K+NL PVYS + +GPPHA F++ VT+DG T+E+ E F T +
Sbjct: 154 KQNLTLPVYSSELDGPPHARCFRSKVTVDGVTYETQEFFSTLKEAEHAAAKVAFESLALN 213
Query: 770 GIQEEDSSFYKNLLQDLAQKEGFPLPNYVTVSSGPSHIPTFACTVEIQGDSFQGTAAKSK 591
QE D YK LLQ+LAQKE P Y T +GP H P F VE+ +FQG AK+K
Sbjct: 214 DTQE-DEGLYKTLLQELAQKEALLFPVYDTARTGPPHAPVFRSMVEVGDGTFQGQEAKTK 272
Query: 590 KQAEINAAKVAYYSLEERSHAKEAHERVSSSSPQIVIIDFEKDLDPRDTMNSTRSLGSLE 411
KQAE+NAAKVAY +L +R E +S SS +V + L
Sbjct: 273 KQAEMNAAKVAYNALVKRGQLDEPLHVLSVSSECVV-----------------ADVSQLV 315
Query: 410 LSEVNEVIDQELQSAEMITASANSSSQSHLKPGTNSTPRNGDSSDEVYAKLRDPFPSIPT 231
+ + ++I +EL S + + TN+ ++ Y+ +RD P
Sbjct: 316 VQQKTKLIIEEL-------------SLQNEEADTNAKRHRCSNAPNTYSLIRDHRP---- 358
Query: 230 SPEDGKSSPSTGSECSDDAVTNLNNNLSSETRSSLLCNNNIQVFPRVPGIKLPEDTTVLP 51
++P S+ +D V ++++ + T S+L + I + PR + LP +VLP
Sbjct: 359 ------AAPFVASDSTDAVVESVDSGTYAGT--SILPSEKIFILPRKANMDLPSGASVLP 410
Query: 50 ISDDKWVAVS 21
S++KWVA S
Sbjct: 411 CSNEKWVAAS 420
>gb|EXB31234.1| Double-stranded RNA-binding protein 4 [Morus notabilis]
Length = 303
Score = 169 bits (427), Expect = 3e-39
Identities = 85/157 (54%), Positives = 104/157 (66%)
Frame = -3
Query: 1007 KEHGELLHIYKNELQNYAMKRNLNSPVYSCKREGPPHAIRFKASVTIDGKTFESPELFRT 828
K ++ H+YK+ELQ YA KRNL PVYSC+REGPPHA RFK VTI+GKT+ES E F T
Sbjct: 93 KNFADIQHLYKSELQVYAQKRNLGFPVYSCEREGPPHASRFKCRVTIEGKTYESSEYFHT 152
Query: 827 XXXXXXXXXXXXXXXXXEDGIQEEDSSFYKNLLQDLAQKEGFPLPNYVTVSSGPSHIPTF 648
D +Q++DS+FYKNLL L QKEG LP Y SG +H P F
Sbjct: 153 LKEAEHAAAKVALISLSPDCVQKDDSAFYKNLLHQLVQKEGLQLPAYYPNRSGEAHSPVF 212
Query: 647 ACTVEIQGDSFQGTAAKSKKQAEINAAKVAYYSLEER 537
+VEI+G+ F G AK+KKQAE+NAAKVAY +L+ER
Sbjct: 213 VSSVEIEGEHFIGEEAKTKKQAEMNAAKVAYNALKER 249
>ref|XP_002325855.2| hypothetical protein POPTR_0019s05420g [Populus trichocarpa]
gi|550316849|gb|EEF00237.2| hypothetical protein
POPTR_0019s05420g [Populus trichocarpa]
Length = 281
Score = 164 bits (415), Expect = 7e-38
Identities = 87/191 (45%), Positives = 117/191 (61%)
Frame = -3
Query: 1127 SSTNAVLNSDPSEKGVMLQKNPEISKSSTMHVDGPAVKGHKEHGELLHIYKNELQNYAMK 948
S +A N+ PS G + + +++ + G K + G +LH++KN+LQ YA K
Sbjct: 87 SGGSAGENTRPSPGGNLELDLQDANRTPLSNEAGAVAKTDESFGGMLHLFKNQLQTYAQK 146
Query: 947 RNLNSPVYSCKREGPPHAIRFKASVTIDGKTFESPELFRTXXXXXXXXXXXXXXXXXEDG 768
RN PVYSC+R GPPHAI+FK VT++G+T+ES E F T +G
Sbjct: 147 RNFTRPVYSCERVGPPHAIQFKCKVTVNGQTYESREYFPTLSKAENAAAKVALMSLLPNG 206
Query: 767 IQEEDSSFYKNLLQDLAQKEGFPLPNYVTVSSGPSHIPTFACTVEIQGDSFQGTAAKSKK 588
+ EED S YKNLLQD+AQ+EG LP Y T SG +H PTF TVEI G +F G A++KK
Sbjct: 207 V-EEDESGYKNLLQDMAQREGCGLPTYFTEKSGEAHAPTFISTVEIDGVNFTGKEARNKK 265
Query: 587 QAEINAAKVAY 555
QAE++AAK+AY
Sbjct: 266 QAEMSAAKIAY 276
>sp|Q5N8Z0.1|DRB1_ORYSJ RecName: Full=Double-stranded RNA-binding protein 1; AltName:
Full=dsRNA-binding protein 1 gi|56785214|dbj|BAD82066.1|
putative dsRNA-binding protein ODB1 [Oryza sativa
Japonica Group]
Length = 441
Score = 160 bits (405), Expect = 1e-36
Identities = 128/359 (35%), Positives = 163/359 (45%), Gaps = 39/359 (10%)
Frame = -3
Query: 980 YKNELQNYAMKRNLNSPVYSCKREGPPHAIRFKASVTIDGKTFESPELFRTXXXXXXXXX 801
YK++LQ YA K+ P Y REGP HA RFK+ VT+DGK FESPE F T
Sbjct: 87 YKSQLQIYAQKKGKLLPSYQTIREGPGHASRFKSVVTVDGKAFESPEYFHTVKEAESAAA 146
Query: 800 XXXXXXXXEDGIQEEDSSF----YKNLLQDLAQKEGFPLPNYVTVSSGPSHIPTFACTVE 633
++ E YKNLLQ+LAQK GF LP Y T S G +P F TV
Sbjct: 147 KLALMSLPQEASSSEQVPVQPLSYKNLLQELAQKHGFSLPVYSTTSDGSVQVPMFKSTVV 206
Query: 632 IQGDSFQGTAAKSKKQAEINAAKVAYYSLEER------------SHAKEAHERVSSSSPQ 489
Q SFQG A +KKQAE+NAA+VA+ E+R H + +S+ +
Sbjct: 207 FQDGSFQGEPANTKKQAEMNAARVAFQHFEDRRKNALSSTVLRGPHLGQGTVHISAGQVK 266
Query: 488 IVIIDFEKDLDPRDTMNST--------RSLGS---LELSEVNEVIDQELQSAEMITASAN 342
I F L T +S SLGS L +++ D +Q E
Sbjct: 267 IAEPVFSVPLASTATSHSATGATDRDYHSLGSTNPLPIAKSTNCADVHIQPCEF------ 320
Query: 341 SSSQSHLKPGTNSTPRNGDSSDEVYAKLRDPFPSIPTSPEDGKSSPSTGSECSDDAVTNL 162
+ P + DSS E+ L D + S P + SS GS+ A T +
Sbjct: 321 -KDEKPAFPEPKTVLEVMDSSPEL-TPLEDAY-SAPVASTSTVSSSGCGSDPLASAST-V 376
Query: 161 NNN-------LSSETRSSLLC-----NNNIQVFPRVPGIKLPEDTTVLPISDDKWVAVS 21
N+ S+ T SS C N +QV+PR P + LPE TVLP SDD WVAVS
Sbjct: 377 NSTGCGSVPLASASTVSSTGCGCSLLTNRVQVYPRRPDLVLPEGATVLPFSDDVWVAVS 435
Score = 70.9 bits (172), Expect = 1e-09
Identities = 50/165 (30%), Positives = 75/165 (45%), Gaps = 11/165 (6%)
Frame = -3
Query: 983 IYKNELQNYAMKRNLNSPVYSCKREGPPHAIRFKASVTIDGKTFESPELFRTXXXXXXXX 804
+YK+ LQ +R P Y+ + GP HA F A+V+++G F +PE
Sbjct: 1 MYKSRLQELCQQRRWAPPEYTHRCAGPAHAPLFGATVSVNGVEFRTPE----DAARSAKE 56
Query: 803 XXXXXXXXXEDGIQE----------EDSSFYKNLLQDLAQKEGFPLPNYVTVSSGPSHIP 654
D + E+ S YK+ LQ AQK+G LP+Y T+ GP H
Sbjct: 57 AHNIAAKAAFDHLSSLPLPPPPPPSENQSSYKSQLQIYAQKKGKLLPSYQTIREGPGHAS 116
Query: 653 TFACTVEIQGDSFQGTA-AKSKKQAEINAAKVAYYSLEERSHAKE 522
F V + G +F+ + K+AE AAK+A SL + + + E
Sbjct: 117 RFKSVVTVDGKAFESPEYFHTVKEAESAAAKLALMSLPQEASSSE 161
>emb|CBI31232.3| unnamed protein product [Vitis vinifera]
Length = 494
Score = 157 bits (396), Expect = 1e-35
Identities = 124/370 (33%), Positives = 180/370 (48%), Gaps = 17/370 (4%)
Frame = -3
Query: 1130 SSSTNAVLNSDPSEKGVMLQKNPEISKSSTMHVDGPAVKGHKEHGELLHIYKNELQNYAM 951
SSS + ++N+ P+ KG + + E ++ + H+YK +LQ YA
Sbjct: 124 SSSASNIVNNVPATKGTLQVQIQETCQTPE---------------GMQHLYKTQLQTYAQ 168
Query: 950 KRNLNSPVYSCKREGPPHAIRFKASVTIDGKTFESPELFRTXXXXXXXXXXXXXXXXXED 771
KRNL P+YS + GP H RFK+ VTI+ +T+ESP+ F T
Sbjct: 169 KRNLPLPMYSFESIGPSHNCRFKSKVTIEEQTYESPDFFPTLKDAEHAAAKLALMSLSPA 228
Query: 770 GIQEEDSSFYKNLLQDLAQKEGFPLPNYVTVSSGPSHIPTFACTVEIQGDSFQGTAAKSK 591
G QE+D YKNLLQ++A+KEG+ LP Y T SG SH+PTF TVEI+G++F G AK+K
Sbjct: 229 GFQEDDYGVYKNLLQEMARKEGYQLPVYSTEKSGVSHMPTFLSTVEIEGETFVGQKAKTK 288
Query: 590 KQAEINAAKVAYYSLEERSHAKEAHERVSSSSPQIVIIDFEK-DLDPRDTMNSTRSLGS- 417
K AE+NAAK AY L+ER + H+ +S S ++ ++ + + T + +++ S
Sbjct: 289 KLAEMNAAKAAYTHLKER-RSNLNHKSLSPSGQELRGVESSSFNSESSGTADLQQNIISK 347
Query: 416 ----LELSEVNEVID-----QELQSAEMITASANSSSQSH------LKPGTNSTPRNGDS 282
L+ S + +D Q+L+S +S S S K ST +
Sbjct: 348 LTLVLKPSAAEQTLDRGGSGQKLKSPSKAVEFPSSGSPSSGVTDLPQKVIPQSTLMLLNQ 407
Query: 281 SDEVYAKLRDPFPSIPTSPEDGKSSPSTGSECSDDAVTNLNNNLSSETRSSLLCNNNIQV 102
S + D I +SP+D SSP T SE D V N S+ C+ I V
Sbjct: 408 STIFAEQDEDREVQIVSSPQDDNSSPPTLSENYIDLVPPEGNEDSA-------CDKVI-V 459
Query: 101 FPRVPGIKLP 72
FP I P
Sbjct: 460 FPSTSKISKP 469
>ref|XP_006291418.1| hypothetical protein CARUB_v10017556mg [Capsella rubella]
gi|482560125|gb|EOA24316.1| hypothetical protein
CARUB_v10017556mg [Capsella rubella]
Length = 347
Score = 156 bits (394), Expect = 2e-35
Identities = 115/349 (32%), Positives = 166/349 (47%), Gaps = 29/349 (8%)
Frame = -3
Query: 986 HIYKNELQNYAMKRNLNSPVYSCKREGPPHAIRFKASVTIDGKTFESPELFRTXXXXXXX 807
H+YK +LQ YA+K+NL+ PVY+ +REGPPHA RF+ +V+ G+TF+S E F T
Sbjct: 3 HVYKGQLQAYALKQNLDLPVYATEREGPPHAPRFRCNVSFCGQTFQSQEFFPTLKSAEHA 62
Query: 806 XXXXXXXXXXEDGIQEEDSSFYKNLLQDLAQKEGFPLPNYVTVSSGPSHIPTFACTVEIQ 627
+ D + YKNLLQ++AQK LP Y T +SGPSH PTF TVE
Sbjct: 63 SAKIALASLTPQSPEGIDVA-YKNLLQEIAQKGNSLLPLYATATSGPSHAPTFISTVEFA 121
Query: 626 GDSFQGTAAKSKKQAEINAAKVAYYSLEE-------------------RSHAKEAHERVS 504
G F G AK+KK AE++AAKVA+ S++ ++ K + + +
Sbjct: 122 GKVFSGEEAKTKKLAEMSAAKVAFMSIKNGNSNQTSSPSLPYERQEPINANVKSSLQEIH 181
Query: 503 SSSPQIVIID---------FEKDLDPRDTMNSTRSLGSLELSEVNEVIDQELQSAEMITA 351
S ++V+ +E DL N+ +L + E N D L + I
Sbjct: 182 SQPSKVVVTPDSPSKWKKLYEDDLHNAPASNAKGMNAALHVPE-NPTNDGTLNATTDINY 240
Query: 350 SANSSSQSHLKPGTNSTPRNGDSSDEVYAKLRDPFPSIPTSP-EDGKSSPSTGSECSDDA 174
SA SSS P TN + +++ + + F S+P +P DG S E
Sbjct: 241 SAASSSPIPQTP-TNIVTLSAPATNGIKRNIAACFSSMPQNPTNDGSEQSSCVDESEKKK 299
Query: 173 VTNLNNNLSSETRSSLLCNNNIQVFPRVPGIKLPEDTTVLPISDDKWVA 27
+ +LS T ++C P P I LPED +L DDK++A
Sbjct: 300 LIMGTGHLSIPTGQHVVCR------PWNPEITLPEDAEML-FRDDKFIA 341
>ref|XP_004141127.1| PREDICTED: uncharacterized protein LOC101222879 [Cucumis sativus]
Length = 446
Score = 154 bits (389), Expect = 7e-35
Identities = 88/238 (36%), Positives = 132/238 (55%), Gaps = 1/238 (0%)
Frame = -3
Query: 1133 RSSSTNAVLNSDPSEKGVMLQKNPEISKSSTMHVDGPAVKGHKEHGELLHIYKNELQNYA 954
+ SS ++ + S+ K P I ++ V K + + H+YKN+LQN++
Sbjct: 153 KESSKDSPIMSNMDVKFTAQSVEPRIQNTNKSPVVEDFDKECLKLTGMQHLYKNKLQNFS 212
Query: 953 MKRNLNSPVYSCKREGPPHAIRFKASVTIDGKTFESPELFRTXXXXXXXXXXXXXXXXXE 774
KR L P+Y+C+R+GPPHA RF+ V IDGKT+ES E T +
Sbjct: 213 QKRGLTLPMYTCERDGPPHASRFRCKVEIDGKTYESLEFHGTLKDAENAVAKVALMSLCQ 272
Query: 773 DGIQEE-DSSFYKNLLQDLAQKEGFPLPNYVTVSSGPSHIPTFACTVEIQGDSFQGTAAK 597
DG QE+ DS YKNLLQ++AQK G LP Y T SG H+P F TV++ ++F+G ++
Sbjct: 273 DGAQEDSDSGLYKNLLQEMAQKGGLGLPAYSTSQSGEVHVPVFVSTVKVGEENFEGKPSR 332
Query: 596 SKKQAEINAAKVAYYSLEERSHAKEAHERVSSSSPQIVIIDFEKDLDPRDTMNSTRSL 423
+KKQAE++AAKVAY++++E S + +R S + I PRD S+ ++
Sbjct: 333 TKKQAEMSAAKVAYFTIKEGSQSISTRKRAPSCDLALEI--------PRDIATSSHNV 382
Score = 73.9 bits (180), Expect = 1e-10
Identities = 70/249 (28%), Positives = 109/249 (43%), Gaps = 8/249 (3%)
Frame = -3
Query: 743 YKNLLQDLAQKEGFPLPNYVTVSSGPSHIPTFACTVEIQGDSFQGTAAKSK-KQAEINAA 567
YKN LQ+ +QK G LP Y GP H F C VEI G +++ K AE A
Sbjct: 204 YKNKLQNFSQKRGLTLPMYTCERDGPPHASRFRCKVEIDGKTYESLEFHGTLKDAENAVA 263
Query: 566 KVAYYSLEERSHAKEAHERVSSSSPQIVIIDFEKDLDPRDTMNSTRS-----LGSLELSE 402
KVA SL + +++ + + Q + L T S + ++++ E
Sbjct: 264 KVALMSLCQDGAQEDSDSGLYKNLLQEMAQKGGLGLPAYSTSQSGEVHVPVFVSTVKVGE 323
Query: 401 VNEVIDQELQSAEMITASANSSSQSHLKPGTNS--TPRNGDSSDEVYAKLRDPFPSIPTS 228
N + ++ + SA + +K G+ S T + S D RD S
Sbjct: 324 EN-FEGKPSRTKKQAEMSAAKVAYFTIKEGSQSISTRKRAPSCDLALEIPRDIATSSHNV 382
Query: 227 PEDGKSSPSTGSECSDDAVTNLNNNLSSETRSSLLCNNNIQVFPRVPGIKLPEDTTVLPI 48
+ G+S D V+ + + L + SS + I V PR P + +P++++VLPI
Sbjct: 383 AQPGQSK---------DYVSRIVSRLEAGKSSS---SKRIFVCPRQPNMTIPKESSVLPI 430
Query: 47 SDDKWVAVS 21
SDD+WVA S
Sbjct: 431 SDDQWVAFS 439
>ref|XP_004170549.1| PREDICTED: double-stranded RNA-binding protein 4-like [Cucumis
sativus]
Length = 247
Score = 153 bits (387), Expect = 1e-34
Identities = 79/189 (41%), Positives = 115/189 (60%), Gaps = 1/189 (0%)
Frame = -3
Query: 986 HIYKNELQNYAMKRNLNSPVYSCKREGPPHAIRFKASVTIDGKTFESPELFRTXXXXXXX 807
H+YKN+LQN++ KR L P+Y+C+R+GPPHA RF+ V IDGKT+ES E T
Sbjct: 3 HLYKNKLQNFSQKRGLTLPMYTCERDGPPHASRFRCKVEIDGKTYESLEFHGTLKDAENA 62
Query: 806 XXXXXXXXXXEDGIQEE-DSSFYKNLLQDLAQKEGFPLPNYVTVSSGPSHIPTFACTVEI 630
+DG QE+ DS YKNLLQ++AQK G LP Y T SG H+P F TV++
Sbjct: 63 VAKVALMSLCQDGAQEDSDSGLYKNLLQEMAQKGGLGLPAYSTSQSGEVHVPVFVSTVKV 122
Query: 629 QGDSFQGTAAKSKKQAEINAAKVAYYSLEERSHAKEAHERVSSSSPQIVIIDFEKDLDPR 450
++F+G +++KKQAE++AAKVAY++++E S + +R S + + PR
Sbjct: 123 GEENFEGKPSRTKKQAEMSAAKVAYFTIKEGSQSISTRKRAPSCDLALEV--------PR 174
Query: 449 DTMNSTRSL 423
D S+ ++
Sbjct: 175 DIATSSHNV 183
Score = 74.3 bits (181), Expect = 9e-11
Identities = 70/249 (28%), Positives = 109/249 (43%), Gaps = 8/249 (3%)
Frame = -3
Query: 743 YKNLLQDLAQKEGFPLPNYVTVSSGPSHIPTFACTVEIQGDSFQGTAAKSK-KQAEINAA 567
YKN LQ+ +QK G LP Y GP H F C VEI G +++ K AE A
Sbjct: 5 YKNKLQNFSQKRGLTLPMYTCERDGPPHASRFRCKVEIDGKTYESLEFHGTLKDAENAVA 64
Query: 566 KVAYYSLEERSHAKEAHERVSSSSPQIVIIDFEKDLDPRDTMNSTRS-----LGSLELSE 402
KVA SL + +++ + + Q + L T S + ++++ E
Sbjct: 65 KVALMSLCQDGAQEDSDSGLYKNLLQEMAQKGGLGLPAYSTSQSGEVHVPVFVSTVKVGE 124
Query: 401 VNEVIDQELQSAEMITASANSSSQSHLKPGTNS--TPRNGDSSDEVYAKLRDPFPSIPTS 228
N + ++ + SA + +K G+ S T + S D RD S
Sbjct: 125 EN-FEGKPSRTKKQAEMSAAKVAYFTIKEGSQSISTRKRAPSCDLALEVPRDIATSSHNV 183
Query: 227 PEDGKSSPSTGSECSDDAVTNLNNNLSSETRSSLLCNNNIQVFPRVPGIKLPEDTTVLPI 48
+ G+S D V+ + + L + SS + I V PR P + +P++++VLPI
Sbjct: 184 AQPGQSK---------DYVSRIVSRLEAGKSSS---SKRIFVCPRQPNMTIPKESSVLPI 231
Query: 47 SDDKWVAVS 21
SDD+WVA S
Sbjct: 232 SDDQWVAFS 240
>ref|XP_002313634.2| hypothetical protein POPTR_0009s15500g [Populus trichocarpa]
gi|550331796|gb|EEE87589.2| hypothetical protein
POPTR_0009s15500g [Populus trichocarpa]
Length = 484
Score = 147 bits (372), Expect = 7e-33
Identities = 118/417 (28%), Positives = 180/417 (43%), Gaps = 47/417 (11%)
Frame = -3
Query: 1121 TNAVLNSDPSEKGVMLQKNPEISKSSTMHVDGPAVKGHKEHGELLHI-----------YK 975
TN S V KN + S+ + G VK + ++ + YK
Sbjct: 103 TNETSQELDSHSSVSDPKNYALISSAEPNAGGQLVKEKNQGSDVQSLSLGVKADTPLKYK 162
Query: 974 NELQNYAMKRNLNSPVYSCKREGPPHAIRFKASVTIDGKTFESPELFRTXXXXXXXXXXX 795
+ LQNYA +N + P Y REGP HA FKA+
Sbjct: 163 SHLQNYARWKNCDLPTYYNTREGPSHAPCFKAT--------------------------- 195
Query: 794 XXXXXXEDGIQEEDSSFYKNLLQDLAQKEGFPLPNYVTVSSGPSHIPTFACTVEIQGDSF 615
+DS FYKN LQ+LAQ+E +P Y + SG H+PTF VEI+G+ F
Sbjct: 196 ------------DDSGFYKNALQELAQREDLSMPVYKIIKSGALHMPTFFSYVEIEGEKF 243
Query: 614 QGTAAKSKKQAEINAAKVAYYSLEERSHAKEAHERVSSSSPQIVIIDFEKDLDPRDTMNS 435
G A KSKK+AE+ +A+ AY L ER+ + A +SSP ++ LD +N
Sbjct: 244 YGKAGKSKKEAELKSARAAYTVLMERALNRNAESDPPNSSPD-ETLNSTPGLDMTTAVNL 302
Query: 434 TRSLGSLELSEVNEVIDQE--LQSAEMITASANSSSQSHLKPGTN--------------S 303
++L ++D+E ++ ++I+ + S + H + + +
Sbjct: 303 QQNLKQNGQLSSPVIVDEEHSAETKDIISLKSVPSLELHCRTYISGIMLITDAVQEVNFA 362
Query: 302 TPRNGDSSDEVYAKLRDPFPSIP--------------------TSPEDGKSSPSTGSECS 183
P++G++ + P P P +SPE SS T + S
Sbjct: 363 DPKSGNAEVGPEDSILSPSPEKPAIVEVIGNQESSSCSEYVPTSSPEGSSSSTWTHNSSS 422
Query: 182 DDAVTNLNNNLSSETRSSLLCNNNIQVFPRVPGIKLPEDTTVLPISDDKWVAVSSNF 12
+++ N ++ RS LLC N ++V+P P I LP TV+PISD++WVAVS F
Sbjct: 423 APTISDSNVRKATRQRSYLLC-NRVRVYPCYPDIALPNGITVMPISDNQWVAVSLEF 478
>ref|XP_006446420.1| hypothetical protein CICLE_v10018273mg [Citrus clementina]
gi|557549031|gb|ESR59660.1| hypothetical protein
CICLE_v10018273mg [Citrus clementina]
Length = 364
Score = 146 bits (368), Expect = 2e-32
Identities = 84/220 (38%), Positives = 123/220 (55%), Gaps = 9/220 (4%)
Frame = -3
Query: 980 YKNELQNYAMKRNLNSPVYSCKREGPPHAIRFKASVTIDGKTFESPELFRTXXXXXXXXX 801
YK+ LQNYA ++NL+SP+YS REGP HA FKA VTIDG TFES E F+
Sbjct: 101 YKSVLQNYARRKNLDSPLYSSIREGPAHACSFKARVTIDGHTFESLEFFKNLKQAEHAAA 160
Query: 800 XXXXXXXXEDGIQEEDSSFYKNLLQDLAQKEGFPLPNYVTVSSGPSHIPTFACTVEIQGD 621
D QE+D FYKN+L +L+ +EG P+P Y T+ G H+PTF VE+ G+
Sbjct: 161 KVALFSLACDDFQEDDGVFYKNVLHELSLREGLPVPLYETIKCGAPHMPTFISMVEVDGE 220
Query: 620 SFQGTAAKSKKQAEINAAKVAYYSLEER---------SHAKEAHERVSSSSPQIVIIDFE 468
F G A ++KK+AE+ AAKVAY +L ER +H +A +S+ + F+
Sbjct: 221 VFYGKAGRTKKKAEMKAAKVAYTALIERGRSCSIGSITHTVKADGVPNSTLSSDLDPCFD 280
Query: 467 KDLDPRDTMNSTRSLGSLELSEVNEVIDQELQSAEMITAS 348
P+ ++S+ + L++S ++ + D +T+S
Sbjct: 281 VPPSPKRCLSSSLPMTELDVSALS-ISDSMAAKRATVTSS 319
Score = 91.7 bits (226), Expect = 6e-16
Identities = 92/366 (25%), Positives = 162/366 (44%), Gaps = 39/366 (10%)
Frame = -3
Query: 983 IYKNELQNYAMKRNLNSPVYSCKREGPPHAIRFKASVTIDGKTFESPELFRTXXXXXXXX 804
+YK ++Q ++ + P YS ++G H RFK+SV+++G +F S ++
Sbjct: 1 MYKTKVQELCHQKRWSLPRYSTMKDGADHDPRFKSSVSVNGLSFHSSVSCKSSKESQNDA 60
Query: 803 XXXXXXXXXEDG----------IQEEDSSF----------YKNLLQDLAQKEGFPLPNYV 684
I D + YK++LQ+ A+++ P Y
Sbjct: 61 AKLAFLHFTSPPPNITRKNNRKIAHLDFPYIHLVPNVQCRYKSVLQNYARRKNLDSPLYS 120
Query: 683 TVSSGPSHIPTFACTVEIQGDSFQGTAA-KSKKQAEINAAKVAYYSLEERSHAKE----- 522
++ GP+H +F V I G +F+ K+ KQAE AAKVA +SL ++
Sbjct: 121 SIREGPAHACSFKARVTIDGHTFESLEFFKNLKQAEHAAAKVALFSLACDDFQEDDGVFY 180
Query: 521 ---AHERVSSSSPQIVIIDFEKDLDPRDTMNSTRSLGSLELSEVNEVIDQELQSAEM--- 360
HE + + + K P M + S+ ++ + + AEM
Sbjct: 181 KNVLHELSLREGLPVPLYETIKCGAPH--MPTFISMVEVDGEVFYGKAGRTKKKAEMKAA 238
Query: 359 ---ITASANSSSQSHLKPGTNSTPRNGDSSDEVYAKLRDPFPSIPTSPEDGKSSPSTGSE 189
TA + T++ +G + + + L DP +P SP+ SS +E
Sbjct: 239 KVAYTALIERGRSCSIGSITHTVKADGVPNSTLSSDL-DPCFDVPPSPKRCLSSSLPMTE 297
Query: 188 CSDDAVTNLNNNLSSE----TRSSLLCNNNIQVFPRVPGIKLPEDTTVLPISDDKWVAVS 21
D + +++++++++ T S LLCN ++V+ R+P I P+ T++PIS+DKWVAVS
Sbjct: 298 L-DVSALSISDSMAAKRATVTSSYLLCNR-VRVYTRIPDIAFPKGITLMPISEDKWVAVS 355
Query: 20 SNFTNQ 3
F N+
Sbjct: 356 LEFPNE 361