BLASTX nr result
ID: Sinomenium21_contig00030003
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00030003
(1460 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera] 640 0.0
ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containi... 638 e-180
ref|XP_004304772.1| PREDICTED: pentatricopeptide repeat-containi... 633 e-179
ref|XP_007030407.1| Pentatricopeptide repeat (PPR-like) superfam... 623 e-176
ref|XP_002521980.1| pentatricopeptide repeat-containing protein,... 610 e-172
gb|EXB93167.1| hypothetical protein L484_024505 [Morus notabilis] 603 e-170
ref|XP_006487702.1| PREDICTED: pentatricopeptide repeat-containi... 595 e-167
ref|XP_006442665.1| hypothetical protein CICLE_v10019446mg [Citr... 593 e-167
ref|XP_006371094.1| hypothetical protein POPTR_0019s03630g [Popu... 589 e-165
ref|XP_007205118.1| hypothetical protein PRUPE_ppa004835mg [Prun... 584 e-164
ref|XP_002884468.1| pentatricopeptide repeat-containing protein ... 580 e-163
ref|NP_566237.1| pentatricopeptide repeat-containing protein [Ar... 578 e-162
ref|XP_006361415.1| PREDICTED: pentatricopeptide repeat-containi... 575 e-161
dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana] 574 e-161
ref|XP_006296608.1| hypothetical protein CARUB_v10013258mg [Caps... 574 e-161
ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containi... 572 e-160
ref|XP_004236781.1| PREDICTED: pentatricopeptide repeat-containi... 570 e-160
ref|XP_003590960.1| Pentatricopeptide repeat-containing protein ... 553 e-155
ref|XP_006375855.1| pentatricopeptide repeat-containing family p... 537 e-150
ref|XP_006589209.1| PREDICTED: pentatricopeptide repeat-containi... 529 e-147
>emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
Length = 592
Score = 640 bits (1652), Expect = 0.0
Identities = 322/468 (68%), Positives = 375/468 (80%), Gaps = 2/468 (0%)
Frame = -3
Query: 1398 MAIFSTDFFSHSIPFNTTI--TKPSHQNLIINSLXXXXXXXXXXXXXPKLKISAETRPAD 1225
M I+STDFF H PF+ + T SH I+ PK+ +SAE RPA
Sbjct: 11 MTIYSTDFFPHCPPFSPQLKPTSHSHHTSIVTCRNPNPNDGYNSRNSPKVGVSAEARPAH 70
Query: 1224 FQSLDFKDTHLLKLFHRSFKAGKLDESLYFLELLINKGCYSPDVVLCTKLIKGFFNSRNV 1045
QS DF++THL+KL +RS KAGK +ESLYFLE L+NKG Y+PDV+LCTKLIKGFFN +N+
Sbjct: 71 LQSYDFRETHLMKLLNRSCKAGKFNESLYFLECLVNKG-YTPDVILCTKLIKGFFNFKNI 129
Query: 1044 RKAVRVMEILESYGKPDAFAYNALISGFCKVNQIGLATKVLDRMKRQFCPPDVVTYNILI 865
KA RVMEILES+ +PD FAYNA+ISGFCKVNQI AT+VL+RMK + PD+VTYNI+I
Sbjct: 130 EKASRVMEILESHTEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMI 189
Query: 864 GSLCSRGKLGLAMKMFGQLLEDKSCEPTVITYTILIEATIVEGGINEAMKLLNEMSLKGL 685
GSLC+R KLGLA+ + QLL D +C PTVITYTILIEATIVEGGINEAMKLL EM +GL
Sbjct: 190 GSLCNRRKLGLALTVLDQLLLD-NCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGL 248
Query: 684 CPDMYTYNAITRGLCKEGMVDEAIEFVKSLPSRGCEPDVISYNVLLRAVLNRGRWSEGER 505
PDMYTYNAI RG+CKEGMV+ A E + SL S+GCEPDVISYN+LLRA LN+G+W EGE+
Sbjct: 249 LPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEK 308
Query: 504 LIAEMISRGCEPNVVTYGILINLFCHDGKVEDAIDVLKVMMEKGLTPDSYSYDPFISTFC 325
L+AEM SRGCEPN VTY ILI+ C G++++AI VLKVM+EK LTPD+YSYDP IS C
Sbjct: 309 LVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALC 368
Query: 324 KEGRLDLAIVFLDYMISNGCAPDIVNYNSILSALCKNGNAHQALEIFEKLGNTGCPPNVS 145
KEGRLDLAI +DYMISNGC PDIVNYN+IL+ALCKNGNA+QALEIF KL GCPPNVS
Sbjct: 369 KEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVS 428
Query: 144 SYNTMISGLWNGGNRIRALGMVLDMVNKGIDPDEITYNSLISCLCRDG 1
SYNTMIS LW+ G+R RALGMV M++KGIDPDEITYNSLISCLCRDG
Sbjct: 429 SYNTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDG 476
Score = 218 bits (555), Expect = 5e-54
Identities = 117/369 (31%), Positives = 203/369 (55%), Gaps = 1/369 (0%)
Frame = -3
Query: 1158 KLDESLYFLELLINKGCYSPDVVLCTKLIKGFFNSRNVRKAVRVMEILESYGK-PDAFAY 982
KL +L L+ L+ C P V+ T LI+ + +A++++E + + G PD + Y
Sbjct: 197 KLGLALTVLDQLLLDNCM-PTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTY 255
Query: 981 NALISGFCKVNQIGLATKVLDRMKRQFCPPDVVTYNILIGSLCSRGKLGLAMKMFGQLLE 802
NA+I G CK + A +++ + + C PDV++YNIL+ + ++GK K+ ++
Sbjct: 256 NAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFS 315
Query: 801 DKSCEPTVITYTILIEATIVEGGINEAMKLLNEMSLKGLCPDMYTYNAITRGLCKEGMVD 622
+ CEP +TY+ILI + G I+EA+ +L M K L PD Y+Y+ + LCKEG +D
Sbjct: 316 -RGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLD 374
Query: 621 EAIEFVKSLPSRGCEPDVISYNVLLRAVLNRGRWSEGERLIAEMISRGCEPNVVTYGILI 442
AI + + S GC PD+++YN +L A+ G ++ + ++ GC PNV +Y +I
Sbjct: 375 LAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMI 434
Query: 441 NLFCHDGKVEDAIDVLKVMMEKGLTPDSYSYDPFISTFCKEGRLDLAIVFLDYMISNGCA 262
+ G A+ ++ M+ KG+ PD +Y+ IS C++G ++ AI LD M +G
Sbjct: 435 SALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFR 494
Query: 261 PDIVNYNSILSALCKNGNAHQALEIFEKLGNTGCPPNVSSYNTMISGLWNGGNRIRALGM 82
P +++YN +L LCK A+ +F ++ GC PN ++Y +I G+ G R A+ +
Sbjct: 495 PTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMEL 554
Query: 81 VLDMVNKGI 55
+ ++ +
Sbjct: 555 ANSLFSRDV 563
>ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Vitis vinifera]
Length = 582
Score = 638 bits (1646), Expect = e-180
Identities = 320/468 (68%), Positives = 375/468 (80%), Gaps = 2/468 (0%)
Frame = -3
Query: 1398 MAIFSTDFFSHSIPFNTTI--TKPSHQNLIINSLXXXXXXXXXXXXXPKLKISAETRPAD 1225
M I+STDFF PFN + T SH I+ PK+ +SAE RPA
Sbjct: 1 MTIYSTDFFPRCPPFNPQLKPTSHSHHTSIVTCRNPNPNDGFNSRNAPKVGVSAEARPAH 60
Query: 1224 FQSLDFKDTHLLKLFHRSFKAGKLDESLYFLELLINKGCYSPDVVLCTKLIKGFFNSRNV 1045
QS DF++THL+KL +RS KAGK +ESLYFLE L+NKG Y+PDV+LCTKLIKGFFN +N+
Sbjct: 61 LQSYDFRETHLMKLLNRSCKAGKFNESLYFLECLVNKG-YTPDVILCTKLIKGFFNFKNI 119
Query: 1044 RKAVRVMEILESYGKPDAFAYNALISGFCKVNQIGLATKVLDRMKRQFCPPDVVTYNILI 865
KA RVMEILES+ +PD FAYNA+ISGFCKVN+I AT+VL+RMK + PD+VTYNI+I
Sbjct: 120 EKASRVMEILESHTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMI 179
Query: 864 GSLCSRGKLGLAMKMFGQLLEDKSCEPTVITYTILIEATIVEGGINEAMKLLNEMSLKGL 685
GSLC+R KLGLA+K+ QLL D +C PTVITYTILIEATIVEGGINEAMKLL EM +GL
Sbjct: 180 GSLCNRRKLGLALKVLDQLLLD-NCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGL 238
Query: 684 CPDMYTYNAITRGLCKEGMVDEAIEFVKSLPSRGCEPDVISYNVLLRAVLNRGRWSEGER 505
PDMYTYNAI RG+CKEGMV+ A E + SL S+GC+PDVISYN+LLRA LN+G+W EGE+
Sbjct: 239 LPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEK 298
Query: 504 LIAEMISRGCEPNVVTYGILINLFCHDGKVEDAIDVLKVMMEKGLTPDSYSYDPFISTFC 325
L+AEM SRGCEPN VTY ILI+ C G++++AI VLKVM+EK LTPD+YSYDP IS C
Sbjct: 299 LVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALC 358
Query: 324 KEGRLDLAIVFLDYMISNGCAPDIVNYNSILSALCKNGNAHQALEIFEKLGNTGCPPNVS 145
KEGRLDLAI +DYMISNGC PDIVNYN+IL+ALCKNGNA+QALEIF KL GCPPNVS
Sbjct: 359 KEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVS 418
Query: 144 SYNTMISGLWNGGNRIRALGMVLDMVNKGIDPDEITYNSLISCLCRDG 1
SYNTMIS LW+ G+R RALGMV M++KG+DPDEITYNSLISCLCRDG
Sbjct: 419 SYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDG 466
Score = 218 bits (554), Expect = 7e-54
Identities = 117/369 (31%), Positives = 203/369 (55%), Gaps = 1/369 (0%)
Frame = -3
Query: 1158 KLDESLYFLELLINKGCYSPDVVLCTKLIKGFFNSRNVRKAVRVMEILESYGK-PDAFAY 982
KL +L L+ L+ C P V+ T LI+ + +A++++E + + G PD + Y
Sbjct: 187 KLGLALKVLDQLLLDNCM-PTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTY 245
Query: 981 NALISGFCKVNQIGLATKVLDRMKRQFCPPDVVTYNILIGSLCSRGKLGLAMKMFGQLLE 802
NA+I G CK + A +++ + + C PDV++YNIL+ + ++GK K+ ++
Sbjct: 246 NAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFS 305
Query: 801 DKSCEPTVITYTILIEATIVEGGINEAMKLLNEMSLKGLCPDMYTYNAITRGLCKEGMVD 622
+ CEP +TY+ILI + G I+EA+ +L M K L PD Y+Y+ + LCKEG +D
Sbjct: 306 -RGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLD 364
Query: 621 EAIEFVKSLPSRGCEPDVISYNVLLRAVLNRGRWSEGERLIAEMISRGCEPNVVTYGILI 442
AI + + S GC PD+++YN +L A+ G ++ + ++ GC PNV +Y +I
Sbjct: 365 LAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMI 424
Query: 441 NLFCHDGKVEDAIDVLKVMMEKGLTPDSYSYDPFISTFCKEGRLDLAIVFLDYMISNGCA 262
+ G A+ ++ M+ KG+ PD +Y+ IS C++G ++ AI LD M +G
Sbjct: 425 SALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFR 484
Query: 261 PDIVNYNSILSALCKNGNAHQALEIFEKLGNTGCPPNVSSYNTMISGLWNGGNRIRALGM 82
P +++YN +L LCK A+ +F ++ GC PN ++Y +I G+ G R A+ +
Sbjct: 485 PTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMEL 544
Query: 81 VLDMVNKGI 55
+ ++ +
Sbjct: 545 ANSLFSRDV 553
>ref|XP_004304772.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 586
Score = 633 bits (1633), Expect = e-179
Identities = 311/472 (65%), Positives = 373/472 (79%), Gaps = 6/472 (1%)
Frame = -3
Query: 1398 MAIFSTDFFSHSIPFNTTITKPSHQN------LIINSLXXXXXXXXXXXXXPKLKISAET 1237
MAI ST+ HS + + SH + +S ++ +SAE
Sbjct: 1 MAIVSTELLPHSFHTTSQLKPTSHSHHPTALSCRASSASSISNGRNSSRNPTRVSVSAEP 60
Query: 1236 RPADFQSLDFKDTHLLKLFHRSFKAGKLDESLYFLELLINKGCYSPDVVLCTKLIKGFFN 1057
+ Q+ DFKDTHL+K+ +RS KAG+ +E++YFLEL++NKG Y PDV+LCTKLIKGFFN
Sbjct: 61 KSTQLQNYDFKDTHLMKVLNRSCKAGQYNEAIYFLELMVNKG-YKPDVILCTKLIKGFFN 119
Query: 1056 SRNVRKAVRVMEILESYGKPDAFAYNALISGFCKVNQIGLATKVLDRMKRQFCPPDVVTY 877
SRN+ KA+RVM+ILE YG+PD FAYNALISGFCK N+I A KVLDRMK Q PDVVTY
Sbjct: 120 SRNIEKAIRVMQILEQYGEPDLFAYNALISGFCKANRIESANKVLDRMKSQGFKPDVVTY 179
Query: 876 NILIGSLCSRGKLGLAMKMFGQLLEDKSCEPTVITYTILIEATIVEGGINEAMKLLNEMS 697
NI+IGSLCSRGKLGLA+++ +L+ D +C+PTVITYTILIEA I++GGINEAMKLL+EM
Sbjct: 180 NIMIGSLCSRGKLGLALQVMDRLVRD-NCKPTVITYTILIEAIILDGGINEAMKLLDEML 238
Query: 696 LKGLCPDMYTYNAITRGLCKEGMVDEAIEFVKSLPSRGCEPDVISYNVLLRAVLNRGRWS 517
+GL PDMYTYNAI RG+C+EGM+D A EFVK ++GC P+VISYN+LLRA+LNRG+W
Sbjct: 239 SRGLKPDMYTYNAIVRGMCREGMLDRAFEFVKCFDAKGCAPNVISYNILLRALLNRGKWE 298
Query: 516 EGERLIAEMISRGCEPNVVTYGILINLFCHDGKVEDAIDVLKVMMEKGLTPDSYSYDPFI 337
EGE L+A M +RGCEPNVVTY ILI+ C DGKVED ++VLK+M EKGLTPD+YSYDP I
Sbjct: 299 EGENLVANMCARGCEPNVVTYSILISTLCRDGKVEDGMNVLKIMKEKGLTPDAYSYDPLI 358
Query: 336 STFCKEGRLDLAIVFLDYMISNGCAPDIVNYNSILSALCKNGNAHQALEIFEKLGNTGCP 157
S FCKEGRLDLAI LD MIS+GC PDIVNYN++L+ALCKNG+A QALEIFE LG GCP
Sbjct: 359 SCFCKEGRLDLAIELLDCMISDGCLPDIVNYNTVLAALCKNGSADQALEIFENLGEVGCP 418
Query: 156 PNVSSYNTMISGLWNGGNRIRALGMVLDMVNKGIDPDEITYNSLISCLCRDG 1
PNVSSYNTM S LWN G+R+RALGMV DMV+KGI+PDEITYNSLISCLCRDG
Sbjct: 419 PNVSSYNTMFSALWNCGDRVRALGMVSDMVSKGIEPDEITYNSLISCLCRDG 470
Score = 212 bits (539), Expect = 4e-52
Identities = 114/359 (31%), Positives = 192/359 (53%), Gaps = 1/359 (0%)
Frame = -3
Query: 1161 GKLDESLYFLELLINKGCYSPDVVLCTKLIKGFFNSRNVRKAVRVMEILESYG-KPDAFA 985
GKL +L ++ L+ C P V+ T LI+ + +A+++++ + S G KPD +
Sbjct: 190 GKLGLALQVMDRLVRDNC-KPTVITYTILIEAIILDGGINEAMKLLDEMLSRGLKPDMYT 248
Query: 984 YNALISGFCKVNQIGLATKVLDRMKRQFCPPDVVTYNILIGSLCSRGKLGLAMKMFGQLL 805
YNA++ G C+ + A + + + C P+V++YNIL+ +L +RGK + +
Sbjct: 249 YNAIVRGMCREGMLDRAFEFVKCFDAKGCAPNVISYNILLRALLNRGKWEEGENLVANMC 308
Query: 804 EDKSCEPTVITYTILIEATIVEGGINEAMKLLNEMSLKGLCPDMYTYNAITRGLCKEGMV 625
+ CEP V+TY+ILI +G + + M +L M KGL PD Y+Y+ + CKEG +
Sbjct: 309 A-RGCEPNVVTYSILISTLCRDGKVEDGMNVLKIMKEKGLTPDAYSYDPLISCFCKEGRL 367
Query: 624 DEAIEFVKSLPSRGCEPDVISYNVLLRAVLNRGRWSEGERLIAEMISRGCEPNVVTYGIL 445
D AIE + + S GC PD+++YN +L A+ G + + + GC PNV +Y +
Sbjct: 368 DLAIELLDCMISDGCLPDIVNYNTVLAALCKNGSADQALEIFENLGEVGCPPNVSSYNTM 427
Query: 444 INLFCHDGKVEDAIDVLKVMMEKGLTPDSYSYDPFISTFCKEGRLDLAIVFLDYMISNGC 265
+ + G A+ ++ M+ KG+ PD +Y+ IS C++G ++ AI L M + G
Sbjct: 428 FSALWNCGDRVRALGMVSDMVSKGIEPDEITYNSLISCLCRDGMVNEAIGLLVDMEAGGF 487
Query: 264 APDIVNYNSILSALCKNGNAHQALEIFEKLGNTGCPPNVSSYNTMISGLWNGGNRIRAL 88
P ++ YN +L L K A+E+F + GC PN ++Y +I G+ G R A+
Sbjct: 488 QPTVITYNIVLLGLSKARRIVDAIEVFTAMVEKGCRPNETTYILLIEGIGFAGWRAEAM 546
Score = 144 bits (364), Expect = 8e-32
Identities = 85/258 (32%), Positives = 140/258 (54%), Gaps = 1/258 (0%)
Frame = -3
Query: 1161 GKLDESLYFLELLINKGCYSPDVVLCTKLIKGFFNSRNVRKAVRVMEILESYG-KPDAFA 985
GK +E + + +GC P+VV + LI V + V++I++ G PDA++
Sbjct: 295 GKWEEGENLVANMCARGC-EPNVVTYSILISTLCRDGKVEDGMNVLKIMKEKGLTPDAYS 353
Query: 984 YNALISGFCKVNQIGLATKVLDRMKRQFCPPDVVTYNILIGSLCSRGKLGLAMKMFGQLL 805
Y+ LIS FCK ++ LA ++LD M C PD+V YN ++ +LC G A+++F L
Sbjct: 354 YDPLISCFCKEGRLDLAIELLDCMISDGCLPDIVNYNTVLAALCKNGSADQALEIFENLG 413
Query: 804 EDKSCEPTVITYTILIEATIVEGGINEAMKLLNEMSLKGLCPDMYTYNAITRGLCKEGMV 625
E C P V +Y + A G A+ ++++M KG+ PD TYN++ LC++GMV
Sbjct: 414 E-VGCPPNVSSYNTMFSALWNCGDRVRALGMVSDMVSKGIEPDEITYNSLISCLCRDGMV 472
Query: 624 DEAIEFVKSLPSRGCEPDVISYNVLLRAVLNRGRWSEGERLIAEMISRGCEPNVVTYGIL 445
+EAI + + + G +P VI+YN++L + R + + M+ +GC PN TY +L
Sbjct: 473 NEAIGLLVDMEAGGFQPTVITYNIVLLGLSKARRIVDAIEVFTAMVEKGCRPNETTYILL 532
Query: 444 INLFCHDGKVEDAIDVLK 391
I G +A+++ K
Sbjct: 533 IEGIGFAGWRAEAMELAK 550
>ref|XP_007030407.1| Pentatricopeptide repeat (PPR-like) superfamily protein [Theobroma
cacao] gi|508719012|gb|EOY10909.1| Pentatricopeptide
repeat (PPR-like) superfamily protein [Theobroma cacao]
Length = 586
Score = 623 bits (1607), Expect = e-176
Identities = 302/472 (63%), Positives = 376/472 (79%), Gaps = 6/472 (1%)
Frame = -3
Query: 1398 MAIFSTDFFSHSIPFNTTITKP-----SHQNLIINSLXXXXXXXXXXXXXP-KLKISAET 1237
M +FST+ +HS+PF T KP SH +++ L K+++SAET
Sbjct: 1 MTLFSTELVTHSLPFTTQQLKPTSNSHSHHTSLVSCLNHESQDSSSKSRNNQKVRVSAET 60
Query: 1236 RPADFQSLDFKDTHLLKLFHRSFKAGKLDESLYFLELLINKGCYSPDVVLCTKLIKGFFN 1057
RP S DFK+THL+KL +RS KAGK +E+ YFLE ++ KG Y PDVVLCTK+IKGFFN
Sbjct: 61 RPTHLLSFDFKETHLMKLLNRSCKAGKYNEAFYFLECMVGKG-YKPDVVLCTKMIKGFFN 119
Query: 1056 SRNVRKAVRVMEILESYGKPDAFAYNALISGFCKVNQIGLATKVLDRMKRQFCPPDVVTY 877
RNV KA RV+EILE YG+PD FAYNA+ISGFCK+N++ A KVLDRM+ + PDVVTY
Sbjct: 120 GRNVEKATRVIEILEKYGEPDVFAYNAIISGFCKMNRLDFANKVLDRMRSRGFSPDVVTY 179
Query: 876 NILIGSLCSRGKLGLAMKMFGQLLEDKSCEPTVITYTILIEATIVEGGINEAMKLLNEMS 697
NI+IGS CSRGKL A K+ QLL+D +C+P+VITYTILIEAT+++G INEAMKLL+EM
Sbjct: 180 NIMIGSFCSRGKLDSAYKVINQLLKD-NCKPSVITYTILIEATMLQGEINEAMKLLDEML 238
Query: 696 LKGLCPDMYTYNAITRGLCKEGMVDEAIEFVKSLPSRGCEPDVISYNVLLRAVLNRGRWS 517
KGL PDM+TYNAI RG+CK+GMV+ A +FV+SL +RGC+PDVISYN+LLR +LN+G+W+
Sbjct: 239 SKGLRPDMFTYNAIIRGMCKDGMVNRAFKFVRSLKARGCQPDVISYNILLRVLLNQGKWA 298
Query: 516 EGERLIAEMISRGCEPNVVTYGILINLFCHDGKVEDAIDVLKVMMEKGLTPDSYSYDPFI 337
EGE+L+ EM+SRGCEPNVVTY ILI+ C +GK+E+A++VLK+M E+GLTPD+YSYDP I
Sbjct: 299 EGEKLVTEMVSRGCEPNVVTYSILISSLCREGKLEEAVNVLKMMKERGLTPDAYSYDPLI 358
Query: 336 STFCKEGRLDLAIVFLDYMISNGCAPDIVNYNSILSALCKNGNAHQALEIFEKLGNTGCP 157
S FCKEGRLDLAI FLD MIS+GC PDIVNYN++L+ LCKNG A QALEIFEKL GCP
Sbjct: 359 SAFCKEGRLDLAIEFLDCMISDGCLPDIVNYNTVLATLCKNGKAEQALEIFEKLREVGCP 418
Query: 156 PNVSSYNTMISGLWNGGNRIRALGMVLDMVNKGIDPDEITYNSLISCLCRDG 1
PNVSSYNTM S LW+ G++++AL M+ +M++K I PDEITYNSLISCLCRDG
Sbjct: 419 PNVSSYNTMFSALWSSGDKVKALEMISEMLSKRIGPDEITYNSLISCLCRDG 470
Score = 229 bits (585), Expect = 2e-57
Identities = 119/359 (33%), Positives = 200/359 (55%), Gaps = 1/359 (0%)
Frame = -3
Query: 1161 GKLDESLYFLELLINKGCYSPDVVLCTKLIKGFFNSRNVRKAVRVMEILESYG-KPDAFA 985
GKLD + + L+ C P V+ T LI+ + +A+++++ + S G +PD F
Sbjct: 190 GKLDSAYKVINQLLKDNC-KPSVITYTILIEATMLQGEINEAMKLLDEMLSKGLRPDMFT 248
Query: 984 YNALISGFCKVNQIGLATKVLDRMKRQFCPPDVVTYNILIGSLCSRGKLGLAMKMFGQLL 805
YNA+I G CK + A K + +K + C PDV++YNIL+ L ++GK K+ +++
Sbjct: 249 YNAIIRGMCKDGMVNRAFKFVRSLKARGCQPDVISYNILLRVLLNQGKWAEGEKLVTEMV 308
Query: 804 EDKSCEPTVITYTILIEATIVEGGINEAMKLLNEMSLKGLCPDMYTYNAITRGLCKEGMV 625
+ CEP V+TY+ILI + EG + EA+ +L M +GL PD Y+Y+ + CKEG +
Sbjct: 309 S-RGCEPNVVTYSILISSLCREGKLEEAVNVLKMMKERGLTPDAYSYDPLISAFCKEGRL 367
Query: 624 DEAIEFVKSLPSRGCEPDVISYNVLLRAVLNRGRWSEGERLIAEMISRGCEPNVVTYGIL 445
D AIEF+ + S GC PD+++YN +L + G+ + + ++ GC PNV +Y +
Sbjct: 368 DLAIEFLDCMISDGCLPDIVNYNTVLATLCKNGKAEQALEIFEKLREVGCPPNVSSYNTM 427
Query: 444 INLFCHDGKVEDAIDVLKVMMEKGLTPDSYSYDPFISTFCKEGRLDLAIVFLDYMISNGC 265
+ G A++++ M+ K + PD +Y+ IS C++G +D AI L M +G
Sbjct: 428 FSALWSSGDKVKALEMISEMLSKRIGPDEITYNSLISCLCRDGMVDEAIELLVDMGCSGI 487
Query: 264 APDIVNYNSILSALCKNGNAHQALEIFEKLGNTGCPPNVSSYNTMISGLWNGGNRIRAL 88
P +++YN +L LCK + A+E+ + + C PN ++Y +I G+ G R A+
Sbjct: 488 PPTVISYNIVLLGLCKVHRINDAIEVLAAMVDKRCQPNETTYILLIEGIGFAGWRSEAM 546
>ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223538784|gb|EEF40384.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 584
Score = 610 bits (1574), Expect = e-172
Identities = 300/469 (63%), Positives = 372/469 (79%), Gaps = 3/469 (0%)
Frame = -3
Query: 1398 MAIFSTDFFSHSIPFNTTITKPSHQNL---IINSLXXXXXXXXXXXXXPKLKISAETRPA 1228
M +FST+F HSI F T KP+ +L I++ + K+++SAETR
Sbjct: 1 MTLFSTEFLPHSISFTTQPLKPTSNSLHSTIVSCIRPELNDANKVRNPQKVRVSAETRQT 60
Query: 1227 DFQSLDFKDTHLLKLFHRSFKAGKLDESLYFLELLINKGCYSPDVVLCTKLIKGFFNSRN 1048
S DFK+ HL+KL +RS +AGK +ESLYFLE +++KG Y+PDV+LCTKLIKGFFNSRN
Sbjct: 61 HVLSFDFKEVHLMKLLNRSCRAGKYNESLYFLECMVDKG-YTPDVILCTKLIKGFFNSRN 119
Query: 1047 VRKAVRVMEILESYGKPDAFAYNALISGFCKVNQIGLATKVLDRMKRQFCPPDVVTYNIL 868
+ KA RVMEILE YGKPD FAYNALISGF K NQ+ A +VLDRMK + PDVVTYNI+
Sbjct: 120 IGKATRVMEILERYGKPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIM 179
Query: 867 IGSLCSRGKLGLAMKMFGQLLEDKSCEPTVITYTILIEATIVEGGINEAMKLLNEMSLKG 688
IGS CSRGKL LA+++F +LL+D +CEPTVITYTILIEATI++GGI+ AMKLL+EM KG
Sbjct: 180 IGSFCSRGKLDLALEIFEELLKD-NCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKG 238
Query: 687 LCPDMYTYNAITRGLCKEGMVDEAIEFVKSLPSRGCEPDVISYNVLLRAVLNRGRWSEGE 508
L PD TYNAI RG+CKE MVD+A E ++SL SRGC+PD+I+YN+LLR +L+RG+WSEGE
Sbjct: 239 LEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGE 298
Query: 507 RLIAEMISRGCEPNVVTYGILINLFCHDGKVEDAIDVLKVMMEKGLTPDSYSYDPFISTF 328
+LI+EMIS GC+PNVVT+ ILI C DGKVE+A+++L+ M EKGL PD+Y YDP I+ F
Sbjct: 299 KLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGF 358
Query: 327 CKEGRLDLAIVFLDYMISNGCAPDIVNYNSILSALCKNGNAHQALEIFEKLGNTGCPPNV 148
C+EGRLDLA FL+YMIS+GC PDIVNYN+I++ LC+ G A QALE+FEKL GCPPNV
Sbjct: 359 CREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNV 418
Query: 147 SSYNTMISGLWNGGNRIRALGMVLDMVNKGIDPDEITYNSLISCLCRDG 1
SSYNT+ S LW+ G+R RAL M+L ++N+GIDPDEITYNSLISCLCRDG
Sbjct: 419 SSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDG 467
Score = 230 bits (587), Expect = 1e-57
Identities = 122/359 (33%), Positives = 200/359 (55%), Gaps = 1/359 (0%)
Frame = -3
Query: 1161 GKLDESLYFLELLINKGCYSPDVVLCTKLIKGFFNSRNVRKAVRVMEILESYG-KPDAFA 985
GKLD +L E L+ C P V+ T LI+ + A+++++ + S G +PD
Sbjct: 187 GKLDLALEIFEELLKDNC-EPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLT 245
Query: 984 YNALISGFCKVNQIGLATKVLDRMKRQFCPPDVVTYNILIGSLCSRGKLGLAMKMFGQLL 805
YNA+I G CK + A ++L + + C PD++TYNIL+ +L SRGK K+ +++
Sbjct: 246 YNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMI 305
Query: 804 EDKSCEPTVITYTILIEATIVEGGINEAMKLLNEMSLKGLCPDMYTYNAITRGLCKEGMV 625
C+P V+T++ILI +G + EA+ LL M KGL PD Y Y+ + G C+EG +
Sbjct: 306 SI-GCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRL 364
Query: 624 DEAIEFVKSLPSRGCEPDVISYNVLLRAVLNRGRWSEGERLIAEMISRGCEPNVVTYGIL 445
D A EF++ + S GC PD+++YN ++ + G+ + + ++ GC PNV +Y L
Sbjct: 365 DLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTL 424
Query: 444 INLFCHDGKVEDAIDVLKVMMEKGLTPDSYSYDPFISTFCKEGRLDLAIVFLDYMISNGC 265
+ G A++++ ++ +G+ PD +Y+ IS C++G +D AI L M S
Sbjct: 425 FSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRY 484
Query: 264 APDIVNYNSILSALCKNGNAHQALEIFEKLGNTGCPPNVSSYNTMISGLWNGGNRIRAL 88
P++V+YN IL LCK A+ A+E+ + GC PN ++Y +I G+ G R A+
Sbjct: 485 RPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGIGFSGLRAEAM 543
>gb|EXB93167.1| hypothetical protein L484_024505 [Morus notabilis]
Length = 587
Score = 603 bits (1554), Expect = e-170
Identities = 293/473 (61%), Positives = 377/473 (79%), Gaps = 7/473 (1%)
Frame = -3
Query: 1398 MAIFSTDFFSHSIPFNTT----ITKPSHQNLIIN--SLXXXXXXXXXXXXXPKLKISAET 1237
MAI ST+F ++PF+ ++ SH L S ++++S ET
Sbjct: 1 MAIISTEFLPQTLPFSPQPKQHTSRQSHTCLSCRNPSQSSTDIYRKKNKKPLRVRVSVET 60
Query: 1236 RPADFQS-LDFKDTHLLKLFHRSFKAGKLDESLYFLELLINKGCYSPDVVLCTKLIKGFF 1060
+ + QS DF ++HLLK+ +RS K+GK +E+LYFLEL+++KG + PDV+LCTK+++GFF
Sbjct: 61 KSPNSQSNSDFSESHLLKVINRSCKSGKYNEALYFLELMVSKG-FKPDVILCTKVMRGFF 119
Query: 1059 NSRNVRKAVRVMEILESYGKPDAFAYNALISGFCKVNQIGLATKVLDRMKRQFCPPDVVT 880
NSRN+ KA+RVMEILE +G+PD F+YNA+ISGFCK N++ LA KVLDRM+ Q PD +T
Sbjct: 120 NSRNIPKAIRVMEILEKHGEPDLFSYNAMISGFCKANRVELANKVLDRMRVQGFSPDTIT 179
Query: 879 YNILIGSLCSRGKLGLAMKMFGQLLEDKSCEPTVITYTILIEATIVEGGINEAMKLLNEM 700
YNI+IGSLCSRGK+ +A K+ +LL D +C+P+VITYTILIEATI EGG+++AM++L EM
Sbjct: 180 YNIMIGSLCSRGKVDMAFKVLDELLRD-NCKPSVITYTILIEATISEGGVDKAMEVLEEM 238
Query: 699 SLKGLCPDMYTYNAITRGLCKEGMVDEAIEFVKSLPSRGCEPDVISYNVLLRAVLNRGRW 520
+GL PDM+TYNAI RG+C+EGM+D A EFV+SL ++GC P+VISYN+LLRA+LNRG+W
Sbjct: 239 LSRGLLPDMFTYNAIVRGMCREGMLDRAFEFVRSLEAKGCSPNVISYNILLRALLNRGKW 298
Query: 519 SEGERLIAEMISRGCEPNVVTYGILINLFCHDGKVEDAIDVLKVMMEKGLTPDSYSYDPF 340
S+GE+++++M+SRGCEPNVVTY ILI+ C DGKVEDA++VLK M EKG+TPD+YSYDP
Sbjct: 299 SDGEKILSDMVSRGCEPNVVTYSILISTLCRDGKVEDAVNVLKAMKEKGITPDAYSYDPL 358
Query: 339 ISTFCKEGRLDLAIVFLDYMISNGCAPDIVNYNSILSALCKNGNAHQALEIFEKLGNTGC 160
IS FCKEGRLDLAI F+DYMIS+G PDIVNYN+IL+ALCKNGNA ALEIFEKLG GC
Sbjct: 359 ISAFCKEGRLDLAIEFMDYMISDGSLPDIVNYNTILAALCKNGNADHALEIFEKLGEVGC 418
Query: 159 PPNVSSYNTMISGLWNGGNRIRALGMVLDMVNKGIDPDEITYNSLISCLCRDG 1
PP VSSYNTM S LWN G RI+AL M+ +MV+K I+PDEITYNSLISCLCR+G
Sbjct: 419 PPTVSSYNTMFSALWNCGERIKALEMISEMVSKRINPDEITYNSLISCLCREG 471
Score = 223 bits (567), Expect = 2e-55
Identities = 117/361 (32%), Positives = 199/361 (55%), Gaps = 1/361 (0%)
Frame = -3
Query: 1161 GKLDESLYFLELLINKGCYSPDVVLCTKLIKGFFNSRNVRKAVRVMEILESYGK-PDAFA 985
GK+D + L+ L+ C P V+ T LI+ + V KA+ V+E + S G PD F
Sbjct: 191 GKVDMAFKVLDELLRDNC-KPSVITYTILIEATISEGGVDKAMEVLEEMLSRGLLPDMFT 249
Query: 984 YNALISGFCKVNQIGLATKVLDRMKRQFCPPDVVTYNILIGSLCSRGKLGLAMKMFGQLL 805
YNA++ G C+ + A + + ++ + C P+V++YNIL+ +L +RGK K+ ++
Sbjct: 250 YNAIVRGMCREGMLDRAFEFVRSLEAKGCSPNVISYNILLRALLNRGKWSDGEKILSDMV 309
Query: 804 EDKSCEPTVITYTILIEATIVEGGINEAMKLLNEMSLKGLCPDMYTYNAITRGLCKEGMV 625
+ CEP V+TY+ILI +G + +A+ +L M KG+ PD Y+Y+ + CKEG +
Sbjct: 310 S-RGCEPNVVTYSILISTLCRDGKVEDAVNVLKAMKEKGITPDAYSYDPLISAFCKEGRL 368
Query: 624 DEAIEFVKSLPSRGCEPDVISYNVLLRAVLNRGRWSEGERLIAEMISRGCEPNVVTYGIL 445
D AIEF+ + S G PD+++YN +L A+ G + ++ GC P V +Y +
Sbjct: 369 DLAIEFMDYMISDGSLPDIVNYNTILAALCKNGNADHALEIFEKLGEVGCPPTVSSYNTM 428
Query: 444 INLFCHDGKVEDAIDVLKVMMEKGLTPDSYSYDPFISTFCKEGRLDLAIVFLDYMISNGC 265
+ + G+ A++++ M+ K + PD +Y+ IS C+EG ++ AI L M + G
Sbjct: 429 FSALWNCGERIKALEMISEMVSKRINPDEITYNSLISCLCREGMVNEAIGLLIDMEAGGF 488
Query: 264 APDIVNYNSILSALCKNGNAHQALEIFEKLGNTGCPPNVSSYNTMISGLWNGGNRIRALG 85
+++YN +L LCK A+E+ + GC PN ++Y +I G+ G R+ A+G
Sbjct: 489 KLSVISYNIVLLGLCKARRIDDAIELLAAMVEKGCRPNETTYTLLIEGIGFAGWRVEAMG 548
Query: 84 M 82
+
Sbjct: 549 L 549
Score = 66.6 bits (161), Expect = 3e-08
Identities = 48/155 (30%), Positives = 73/155 (47%), Gaps = 1/155 (0%)
Frame = -3
Query: 1167 KAGKLDESLYFLELLINKGCYSPDVVLCTKLIKGFFNSRNVRKAVRVM-EILESYGKPDA 991
K G D +L E L GC P V + +N KA+ ++ E++ PD
Sbjct: 399 KNGNADHALEIFEKLGEVGC-PPTVSSYNTMFSALWNCGERIKALEMISEMVSKRINPDE 457
Query: 990 FAYNALISGFCKVNQIGLATKVLDRMKRQFCPPDVVTYNILIGSLCSRGKLGLAMKMFGQ 811
YN+LIS C+ + A +L M+ V++YNI++ LC ++ A+++
Sbjct: 458 ITYNSLISCLCREGMVNEAIGLLIDMEAGGFKLSVISYNIVLLGLCKARRIDDAIELLAA 517
Query: 810 LLEDKSCEPTVITYTILIEATIVEGGINEAMKLLN 706
++E K C P TYT+LIE G EAM L N
Sbjct: 518 MVE-KGCRPNETTYTLLIEGIGFAGWRVEAMGLAN 551
>ref|XP_006487702.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Citrus sinensis]
Length = 583
Score = 595 bits (1534), Expect = e-167
Identities = 301/470 (64%), Positives = 362/470 (77%), Gaps = 6/470 (1%)
Frame = -3
Query: 1392 IFSTDFFSHSIPFNTTITKPSHQNL---IINSLXXXXXXXXXXXXXPKLKIS--AETRP- 1231
I STDF +P N I HQ L +S+ ++++S AETRP
Sbjct: 4 ISSTDF----VPRNLVIFTSQHQQLKPTTSHSVQSTVVSCINPKSNERVRVSSSAETRPN 59
Query: 1230 ADFQSLDFKDTHLLKLFHRSFKAGKLDESLYFLELLINKGCYSPDVVLCTKLIKGFFNSR 1051
S D K+T +KL +SF+AGK DESLYF+E ++ GC PDVV+CTKLIK FF R
Sbjct: 60 THLLSFDVKETQFMKLIKKSFRAGKFDESLYFIESMVANGC-KPDVVMCTKLIKKFFQER 118
Query: 1050 NVRKAVRVMEILESYGKPDAFAYNALISGFCKVNQIGLATKVLDRMKRQFCPPDVVTYNI 871
KAVRVMEILE YG+PD FAYNALISGFCK NQI LA KVLDR++ + PDVVTYNI
Sbjct: 119 KSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNI 178
Query: 870 LIGSLCSRGKLGLAMKMFGQLLEDKSCEPTVITYTILIEATIVEGGINEAMKLLNEMSLK 691
+IGSLCSRG + A K+F QLL D +C+PTVITYTILI+AT++EG ++AMKLL+EM +
Sbjct: 179 MIGSLCSRGMIESAFKVFDQLLRD-NCKPTVITYTILIQATMLEGQTDKAMKLLDEMLAR 237
Query: 690 GLCPDMYTYNAITRGLCKEGMVDEAIEFVKSLPSRGCEPDVISYNVLLRAVLNRGRWSEG 511
GL PDM+T NAI RG+CK+GMV +A +FV+SL SRGC+PDVISYN+LLR +LN G+W EG
Sbjct: 238 GLIPDMFTNNAIIRGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEG 297
Query: 510 ERLIAEMISRGCEPNVVTYGILINLFCHDGKVEDAIDVLKVMMEKGLTPDSYSYDPFIST 331
E+L+ EMISRG EPNVVTY ILI+ C DGK EDA+DVL+ EKGLTPD+YSYDP IS
Sbjct: 298 EKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISA 357
Query: 330 FCKEGRLDLAIVFLDYMISNGCAPDIVNYNSILSALCKNGNAHQALEIFEKLGNTGCPPN 151
+CK+GRLDLAI FLDYMIS+GC PDIVNYN+IL+A CKNGNA QALEIFEKL + GCPPN
Sbjct: 358 YCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPN 417
Query: 150 VSSYNTMISGLWNGGNRIRALGMVLDMVNKGIDPDEITYNSLISCLCRDG 1
VSSYNTM S LW+ G++IRALGM+ +M++KGI+PDEITYNSLISCLCRDG
Sbjct: 418 VSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDG 467
Score = 212 bits (540), Expect = 3e-52
Identities = 111/367 (30%), Positives = 197/367 (53%), Gaps = 1/367 (0%)
Frame = -3
Query: 1161 GKLDESLYFLELLINKGCYSPDVVLCTKLIKGFFNSRNVRKAVRVMEILESYGK-PDAFA 985
G ++ + + L+ C P V+ T LI+ KA+++++ + + G PD F
Sbjct: 187 GMIESAFKVFDQLLRDNC-KPTVITYTILIQATMLEGQTDKAMKLLDEMLARGLIPDMFT 245
Query: 984 YNALISGFCKVNQIGLATKVLDRMKRQFCPPDVVTYNILIGSLCSRGKLGLAMKMFGQLL 805
NA+I G CK +G A + + ++ + C PDV++YN+L+ +L + GK K+ +++
Sbjct: 246 NNAIIRGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMI 305
Query: 804 EDKSCEPTVITYTILIEATIVEGGINEAMKLLNEMSLKGLCPDMYTYNAITRGLCKEGMV 625
+ EP V+TY+ILI + +G +A+ +L KGL PD Y+Y+ + CK+G +
Sbjct: 306 S-RGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL 364
Query: 624 DEAIEFVKSLPSRGCEPDVISYNVLLRAVLNRGRWSEGERLIAEMISRGCEPNVVTYGIL 445
D AIEF+ + S GC PD+++YN +L A G + + ++ GC PNV +Y +
Sbjct: 365 DLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTM 424
Query: 444 INLFCHDGKVEDAIDVLKVMMEKGLTPDSYSYDPFISTFCKEGRLDLAIVFLDYMISNGC 265
+ G A+ ++ M+ KG+ PD +Y+ IS C++G +D A+ L M S
Sbjct: 425 FSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF 484
Query: 264 APDIVNYNSILSALCKNGNAHQALEIFEKLGNTGCPPNVSSYNTMISGLWNGGNRIRALG 85
P +++YN I+ CK ++++E+ + GC PN ++Y +I G+ GG R A+
Sbjct: 485 RPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAME 544
Query: 84 MVLDMVN 64
+ +V+
Sbjct: 545 LANALVS 551
>ref|XP_006442665.1| hypothetical protein CICLE_v10019446mg [Citrus clementina]
gi|557544927|gb|ESR55905.1| hypothetical protein
CICLE_v10019446mg [Citrus clementina]
Length = 583
Score = 593 bits (1528), Expect = e-167
Identities = 300/470 (63%), Positives = 360/470 (76%), Gaps = 6/470 (1%)
Frame = -3
Query: 1392 IFSTDFFSHSIPFNTTITKPSHQN---LIINSLXXXXXXXXXXXXXPKLKIS--AETRP- 1231
I STDF +P N I HQ +S+ ++++S AETRP
Sbjct: 4 ISSTDF----VPRNLVIFTSQHQQQKPTTSHSVQSTVVSCINPKSNERVRVSSSAETRPN 59
Query: 1230 ADFQSLDFKDTHLLKLFHRSFKAGKLDESLYFLELLINKGCYSPDVVLCTKLIKGFFNSR 1051
S D K+T +KL RSF+AGK DESLYF+E ++ GC PDVV+CTKLIK FF R
Sbjct: 60 THLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGC-KPDVVMCTKLIKKFFQER 118
Query: 1050 NVRKAVRVMEILESYGKPDAFAYNALISGFCKVNQIGLATKVLDRMKRQFCPPDVVTYNI 871
KAVRVMEILE YG+PD FAYNALISGFCK NQI LA KVLDR++ + PDVVTYNI
Sbjct: 119 KSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNI 178
Query: 870 LIGSLCSRGKLGLAMKMFGQLLEDKSCEPTVITYTILIEATIVEGGINEAMKLLNEMSLK 691
+IGSLCSRG + K+F QLL D +C+PTVITYTILI+AT++EG ++AMKLL+EM +
Sbjct: 179 MIGSLCSRGMIESGFKVFDQLLRD-NCKPTVITYTILIQATMLEGQTDKAMKLLDEMFAR 237
Query: 690 GLCPDMYTYNAITRGLCKEGMVDEAIEFVKSLPSRGCEPDVISYNVLLRAVLNRGRWSEG 511
GL PDM+T NAI RG+CK+GMV +A +FV+SL SRGC+PDVISYN+LLR +LN G+W EG
Sbjct: 238 GLIPDMFTNNAIIRGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEG 297
Query: 510 ERLIAEMISRGCEPNVVTYGILINLFCHDGKVEDAIDVLKVMMEKGLTPDSYSYDPFIST 331
E+L+ EMISRG EPNVVTY ILI+ C DGK EDA+DVL+ EKGLTPD+YSYDP IS
Sbjct: 298 EKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISA 357
Query: 330 FCKEGRLDLAIVFLDYMISNGCAPDIVNYNSILSALCKNGNAHQALEIFEKLGNTGCPPN 151
+CK+GRLDLAI FLDYMIS+GC PDIVNYN+IL+A CKNGNA QALEIFEKL + GCPPN
Sbjct: 358 YCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPN 417
Query: 150 VSSYNTMISGLWNGGNRIRALGMVLDMVNKGIDPDEITYNSLISCLCRDG 1
VSSYNTM S LW+ G++IRALGM+ +M++KGI+PDEITYNSLISCLCRDG
Sbjct: 418 VSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDG 467
Score = 213 bits (543), Expect = 1e-52
Identities = 113/367 (30%), Positives = 196/367 (53%), Gaps = 1/367 (0%)
Frame = -3
Query: 1161 GKLDESLYFLELLINKGCYSPDVVLCTKLIKGFFNSRNVRKAVRVMEILESYGK-PDAFA 985
G ++ + L+ C P V+ T LI+ KA+++++ + + G PD F
Sbjct: 187 GMIESGFKVFDQLLRDNC-KPTVITYTILIQATMLEGQTDKAMKLLDEMFARGLIPDMFT 245
Query: 984 YNALISGFCKVNQIGLATKVLDRMKRQFCPPDVVTYNILIGSLCSRGKLGLAMKMFGQLL 805
NA+I G CK +G A + + ++ + C PDV++YN+L+ +L + GK K+ +++
Sbjct: 246 NNAIIRGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMI 305
Query: 804 EDKSCEPTVITYTILIEATIVEGGINEAMKLLNEMSLKGLCPDMYTYNAITRGLCKEGMV 625
+ EP V+TY+ILI + +G +A+ +L KGL PD Y+Y+ + CK+G +
Sbjct: 306 S-RGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL 364
Query: 624 DEAIEFVKSLPSRGCEPDVISYNVLLRAVLNRGRWSEGERLIAEMISRGCEPNVVTYGIL 445
D AIEF+ + S GC PD+++YN +L A G + + ++ GC PNV +Y +
Sbjct: 365 DLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTM 424
Query: 444 INLFCHDGKVEDAIDVLKVMMEKGLTPDSYSYDPFISTFCKEGRLDLAIVFLDYMISNGC 265
+ G A+ ++ M+ KG+ PD +Y+ IS C++G +D A+ L M S
Sbjct: 425 FSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF 484
Query: 264 APDIVNYNSILSALCKNGNAHQALEIFEKLGNTGCPPNVSSYNTMISGLWNGGNRIRALG 85
P +V+YN I+ CK ++A+E+ + GC PN ++Y +I G+ GG R A+
Sbjct: 485 RPTVVSYNIIILGFCKTRRINEAIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAME 544
Query: 84 MVLDMVN 64
+ +V+
Sbjct: 545 LANALVS 551
>ref|XP_006371094.1| hypothetical protein POPTR_0019s03630g [Populus trichocarpa]
gi|550316702|gb|ERP48891.1| hypothetical protein
POPTR_0019s03630g [Populus trichocarpa]
Length = 586
Score = 589 bits (1518), Expect = e-165
Identities = 292/476 (61%), Positives = 367/476 (77%), Gaps = 10/476 (2%)
Frame = -3
Query: 1398 MAIFSTDFFSHSIPFNTTITKPSHQNLIINSLXXXXXXXXXXXXXP---------KLK-I 1249
M +FST+F SHS F T H L ++SL KL+ +
Sbjct: 1 MTMFSTEFISHSCSFPFT---SKHFKLSLHSLQSNVVSCINPTHNDTNSNLGNPPKLRRV 57
Query: 1248 SAETRPADFQSLDFKDTHLLKLFHRSFKAGKLDESLYFLELLINKGCYSPDVVLCTKLIK 1069
ET+P S DFK+THL+KL +RS KAGK +ESLYFLE ++ KG Y PDV++CTKLIK
Sbjct: 58 LPETKPTHVLSYDFKETHLMKLLNRSCKAGKCNESLYFLECMVAKG-YQPDVIMCTKLIK 116
Query: 1068 GFFNSRNVRKAVRVMEILESYGKPDAFAYNALISGFCKVNQIGLATKVLDRMKRQFCPPD 889
GFFNSRN+ KA RVMEILE +G+PD FAYNA+ISGFCK N+I A KVLDRMKR+ D
Sbjct: 117 GFFNSRNIEKATRVMEILEKHGEPDVFAYNAVISGFCKANRIESAKKVLDRMKRKGFSQD 176
Query: 888 VVTYNILIGSLCSRGKLGLAMKMFGQLLEDKSCEPTVITYTILIEATIVEGGINEAMKLL 709
VVTYNI+IG+ CS+GK+ LA+K+F +LL+D +C+PT+ITYTILIEA I+EGGI+E +KLL
Sbjct: 177 VVTYNIMIGTFCSKGKIDLALKVFEELLKDNNCKPTLITYTILIEAHILEGGIDEGLKLL 236
Query: 708 NEMSLKGLCPDMYTYNAITRGLCKEGMVDEAIEFVKSLPSRGCEPDVISYNVLLRAVLNR 529
+EM +GL PD +TYN I RGL KEG V++A E V++L SRGC+PDVI+YN+LLRA+L++
Sbjct: 237 DEMLSRGLEPDTFTYNVIVRGLGKEGKVNQAFELVRTLNSRGCKPDVITYNILLRALLDQ 296
Query: 528 GRWSEGERLIAEMISRGCEPNVVTYGILINLFCHDGKVEDAIDVLKVMMEKGLTPDSYSY 349
G+W EGE+L+ EM SRGCEPNVVTY ILI+ C DGK+E++++++KVM EKGLTPD+Y Y
Sbjct: 297 GKWYEGEKLMDEMFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCY 356
Query: 348 DPFISTFCKEGRLDLAIVFLDYMISNGCAPDIVNYNSILSALCKNGNAHQALEIFEKLGN 169
DP I+ FC+EG+LD+AI FLDYMIS+G PDIVNYN+I++ALCKNGN+ A+EIF KL
Sbjct: 357 DPLIAAFCREGKLDMAIKFLDYMISDGFLPDIVNYNTIMAALCKNGNSDHAVEIFGKLEE 416
Query: 168 TGCPPNVSSYNTMISGLWNGGNRIRALGMVLDMVNKGIDPDEITYNSLISCLCRDG 1
GCPPNVSSYNTM+S LW G+R RALGM+ M++ GIDPD ITYNSLISCLCRDG
Sbjct: 417 VGCPPNVSSYNTMLSALWGSGDRYRALGMISQMLSTGIDPDGITYNSLISCLCRDG 472
Score = 219 bits (557), Expect = 3e-54
Identities = 113/359 (31%), Positives = 196/359 (54%), Gaps = 1/359 (0%)
Frame = -3
Query: 1161 GKLDESLYFLELLINKGCYSPDVVLCTKLIKGFFNSRNVRKAVRVMEILESYG-KPDAFA 985
GK+D +L E L+ P ++ T LI+ + + +++++ + S G +PD F
Sbjct: 191 GKIDLALKVFEELLKDNNCKPTLITYTILIEAHILEGGIDEGLKLLDEMLSRGLEPDTFT 250
Query: 984 YNALISGFCKVNQIGLATKVLDRMKRQFCPPDVVTYNILIGSLCSRGKLGLAMKMFGQLL 805
YN ++ G K ++ A +++ + + C PDV+TYNIL+ +L +GK K+ ++
Sbjct: 251 YNVIVRGLGKEGKVNQAFELVRTLNSRGCKPDVITYNILLRALLDQGKWYEGEKLMDEMF 310
Query: 804 EDKSCEPTVITYTILIEATIVEGGINEAMKLLNEMSLKGLCPDMYTYNAITRGLCKEGMV 625
+ CEP V+TY+ILI + +G I E++ L+ M KGL PD Y Y+ + C+EG +
Sbjct: 311 S-RGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKL 369
Query: 624 DEAIEFVKSLPSRGCEPDVISYNVLLRAVLNRGRWSEGERLIAEMISRGCEPNVVTYGIL 445
D AI+F+ + S G PD+++YN ++ A+ G + ++ GC PNV +Y +
Sbjct: 370 DMAIKFLDYMISDGFLPDIVNYNTIMAALCKNGNSDHAVEIFGKLEEVGCPPNVSSYNTM 429
Query: 444 INLFCHDGKVEDAIDVLKVMMEKGLTPDSYSYDPFISTFCKEGRLDLAIVFLDYMISNGC 265
++ G A+ ++ M+ G+ PD +Y+ IS C++G +D AI L M+S
Sbjct: 430 LSALWGSGDRYRALGMISQMLSTGIDPDGITYNSLISCLCRDGMVDEAIGLLADMLSGRF 489
Query: 264 APDIVNYNSILSALCKNGNAHQALEIFEKLGNTGCPPNVSSYNTMISGLWNGGNRIRAL 88
P+IV+YN +L LCK A+E+ + GC PN ++Y +I G+ G+R +A+
Sbjct: 490 QPNIVSYNIVLLGLCKVHRIDDAIEVLTAMIENGCQPNETTYTLLIEGIGFSGSRAQAM 548
Score = 192 bits (489), Expect = 2e-46
Identities = 114/335 (34%), Positives = 176/335 (52%), Gaps = 6/335 (1%)
Frame = -3
Query: 1161 GKLDESLYFLELLINKGCYSPDVVLCTKLIKGFFNSRNVRKAVRVMEILESYG-KPDAFA 985
G +DE L L+ ++++G PD +++G V +A ++ L S G KPD
Sbjct: 227 GGIDEGLKLLDEMLSRGL-EPDTFTYNVIVRGLGKEGKVNQAFELVRTLNSRGCKPDVIT 285
Query: 984 YNALISGFCKVNQIGLATKVLDRMKRQFCPPDVVTYNILIGSLCSRGKLGLAMKMFGQLL 805
YN L+ + K++D M + C P+VVTY+ILI SLC GK+ ++ + +++
Sbjct: 286 YNILLRALLDQGKWYEGEKLMDEMFSRGCEPNVVTYSILISSLCRDGKIEESVNLV-KVM 344
Query: 804 EDKSCEPTVITYTILIEATIVEGGINEAMKLLNEMSLKGLCPDMYTYNAITRGLCKEGMV 625
++K P Y LI A EG ++ A+K L+ M G PD+ YN I LCK G
Sbjct: 345 KEKGLTPDAYCYDPLIAAFCREGKLDMAIKFLDYMISDGFLPDIVNYNTIMAALCKNGNS 404
Query: 624 DEAIEFVKSLPSRGCEPDVISYNVLLRAVLNRGRWSEGER-----LIAEMISRGCEPNVV 460
D A+E L GC P+V SYN +L A+ W G+R +I++M+S G +P+ +
Sbjct: 405 DHAVEIFGKLEEVGCPPNVSSYNTMLSAL-----WGSGDRYRALGMISQMLSTGIDPDGI 459
Query: 459 TYGILINLFCHDGKVEDAIDVLKVMMEKGLTPDSYSYDPFISTFCKEGRLDLAIVFLDYM 280
TY LI+ C DG V++AI +L M+ P+ SY+ + CK R+D AI L M
Sbjct: 460 TYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYNIVLLGLCKVHRIDDAIEVLTAM 519
Query: 279 ISNGCAPDIVNYNSILSALCKNGNAHQALEIFEKL 175
I NGC P+ Y ++ + +G+ QA+E+ L
Sbjct: 520 IENGCQPNETTYTLLIEGIGFSGSRAQAMELANSL 554
Score = 113 bits (282), Expect = 2e-22
Identities = 79/293 (26%), Positives = 137/293 (46%), Gaps = 36/293 (12%)
Frame = -3
Query: 1161 GKLDESLYFLELLINKGCYSPDVVLCTKLIKGFFNSRNVRKAVRVMEILESYG-KPDAFA 985
GK E ++ + ++GC P+VV + LI + ++V ++++++ G PDA+
Sbjct: 297 GKWYEGEKLMDEMFSRGC-EPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYC 355
Query: 984 YNALISGFCKVNQIGLATKVLDRMKRQFCPPDVVTYNILIGSLCSRGKLGLAMKMFGQLL 805
Y+ LI+ FC+ ++ +A K LD M PD+V YN ++ +LC G A+++FG+L
Sbjct: 356 YDPLIAAFCREGKLDMAIKFLDYMISDGFLPDIVNYNTIMAALCKNGNSDHAVEIFGKL- 414
Query: 804 EDKSCEPTV-----------------------------------ITYTILIEATIVEGGI 730
E+ C P V ITY LI +G +
Sbjct: 415 EEVGCPPNVSSYNTMLSALWGSGDRYRALGMISQMLSTGIDPDGITYNSLISCLCRDGMV 474
Query: 729 NEAMKLLNEMSLKGLCPDMYTYNAITRGLCKEGMVDEAIEFVKSLPSRGCEPDVISYNVL 550
+EA+ LL +M P++ +YN + GLCK +D+AIE + ++ GC+P+ +Y +L
Sbjct: 475 DEAIGLLADMLSGRFQPNIVSYNIVLLGLCKVHRIDDAIEVLTAMIENGCQPNETTYTLL 534
Query: 549 LRAVLNRGRWSEGERLIAEMISRGCEPNVVTYGILINLFCHDGKVEDAIDVLK 391
+ + G ++ L + S N ++ G L KV +DV K
Sbjct: 535 IEGIGFSGSRAQAMELANSLYSM----NAISEGSYKRL----NKVFPLLDVYK 579
>ref|XP_007205118.1| hypothetical protein PRUPE_ppa004835mg [Prunus persica]
gi|462400760|gb|EMJ06317.1| hypothetical protein
PRUPE_ppa004835mg [Prunus persica]
Length = 489
Score = 584 bits (1505), Expect = e-164
Identities = 278/375 (74%), Positives = 326/375 (86%)
Frame = -3
Query: 1125 LINKGCYSPDVVLCTKLIKGFFNSRNVRKAVRVMEILESYGKPDAFAYNALISGFCKVNQ 946
++NKG Y PDV+LCTKLIKGFFNSRN+ KA+RVM+ILE YG+PD F+YNALISGFCK N+
Sbjct: 1 MVNKG-YKPDVILCTKLIKGFFNSRNIEKAIRVMQILEKYGEPDLFSYNALISGFCKANR 59
Query: 945 IGLATKVLDRMKRQFCPPDVVTYNILIGSLCSRGKLGLAMKMFGQLLEDKSCEPTVITYT 766
I A KVLDRM+ Q PDVVTYNI+IGSLCSRGKLGLA+K+ QL++D +C PTVITYT
Sbjct: 60 IESANKVLDRMRSQGFSPDVVTYNIMIGSLCSRGKLGLALKVMDQLVKD-NCRPTVITYT 118
Query: 765 ILIEATIVEGGINEAMKLLNEMSLKGLCPDMYTYNAITRGLCKEGMVDEAIEFVKSLPSR 586
ILIEATIV+GGI+EAMKLL+EM +GL PDMYTYNA+ RG+C+EGM+D A +FV+SL S+
Sbjct: 119 ILIEATIVDGGIDEAMKLLDEMLSRGLKPDMYTYNAVIRGMCREGMLDRAFQFVRSLDSK 178
Query: 585 GCEPDVISYNVLLRAVLNRGRWSEGERLIAEMISRGCEPNVVTYGILINLFCHDGKVEDA 406
GC P+VISYN+LLRA+LNRG+W EGE+L+ M SRGCEPNVVTY ILI+ C DGKVEDA
Sbjct: 179 GCPPNVISYNILLRALLNRGKWEEGEKLVTNMCSRGCEPNVVTYSILISTLCRDGKVEDA 238
Query: 405 IDVLKVMMEKGLTPDSYSYDPFISTFCKEGRLDLAIVFLDYMISNGCAPDIVNYNSILSA 226
++VLK+M +KGLTPD+YSYDP +S FCKEGRLDLAI FLDYMIS+GC PDIVNYN+IL+A
Sbjct: 239 VNVLKIMKKKGLTPDAYSYDPLVSAFCKEGRLDLAIEFLDYMISDGCLPDIVNYNTILAA 298
Query: 225 LCKNGNAHQALEIFEKLGNTGCPPNVSSYNTMISGLWNGGNRIRALGMVLDMVNKGIDPD 46
LCK+G A QAL+IFE LG GCPPNVSSYNTM S LWN G+R+RALGMV +MV KGI PD
Sbjct: 299 LCKSGKADQALQIFENLGEVGCPPNVSSYNTMFSALWNCGDRVRALGMVSEMVGKGIKPD 358
Query: 45 EITYNSLISCLCRDG 1
EITYNSLISCLCRDG
Sbjct: 359 EITYNSLISCLCRDG 373
Score = 225 bits (574), Expect = 3e-56
Identities = 119/359 (33%), Positives = 201/359 (55%), Gaps = 1/359 (0%)
Frame = -3
Query: 1161 GKLDESLYFLELLINKGCYSPDVVLCTKLIKGFFNSRNVRKAVRVMEILESYG-KPDAFA 985
GKL +L ++ L+ C P V+ T LI+ + +A+++++ + S G KPD +
Sbjct: 93 GKLGLALKVMDQLVKDNC-RPTVITYTILIEATIVDGGIDEAMKLLDEMLSRGLKPDMYT 151
Query: 984 YNALISGFCKVNQIGLATKVLDRMKRQFCPPDVVTYNILIGSLCSRGKLGLAMKMFGQLL 805
YNA+I G C+ + A + + + + CPP+V++YNIL+ +L +RGK K+ +
Sbjct: 152 YNAVIRGMCREGMLDRAFQFVRSLDSKGCPPNVISYNILLRALLNRGKWEEGEKLVTNMC 211
Query: 804 EDKSCEPTVITYTILIEATIVEGGINEAMKLLNEMSLKGLCPDMYTYNAITRGLCKEGMV 625
+ CEP V+TY+ILI +G + +A+ +L M KGL PD Y+Y+ + CKEG +
Sbjct: 212 S-RGCEPNVVTYSILISTLCRDGKVEDAVNVLKIMKKKGLTPDAYSYDPLVSAFCKEGRL 270
Query: 624 DEAIEFVKSLPSRGCEPDVISYNVLLRAVLNRGRWSEGERLIAEMISRGCEPNVVTYGIL 445
D AIEF+ + S GC PD+++YN +L A+ G+ + ++ + GC PNV +Y +
Sbjct: 271 DLAIEFLDYMISDGCLPDIVNYNTILAALCKSGKADQALQIFENLGEVGCPPNVSSYNTM 330
Query: 444 INLFCHDGKVEDAIDVLKVMMEKGLTPDSYSYDPFISTFCKEGRLDLAIVFLDYMISNGC 265
+ + G A+ ++ M+ KG+ PD +Y+ IS C++G +D AI L M + G
Sbjct: 331 FSALWNCGDRVRALGMVSEMVGKGIKPDEITYNSLISCLCRDGMVDEAIGLLVDMETGGF 390
Query: 264 APDIVNYNSILSALCKNGNAHQALEIFEKLGNTGCPPNVSSYNTMISGLWNGGNRIRAL 88
P +++YN IL LCK A+++ ++ GC PN ++Y +I G+ G R A+
Sbjct: 391 QPTVISYNIILLGLCKTRRVVDAIQVLTEMVEKGCRPNETTYILLIEGIGFAGWRAEAM 449
Score = 118 bits (295), Expect = 8e-24
Identities = 78/261 (29%), Positives = 123/261 (47%), Gaps = 35/261 (13%)
Frame = -3
Query: 1161 GKLDESLYFLELLINKGCYSPDVVLCTKLIKGFFNSRNVRKAVRVMEILESYG-KPDAFA 985
GK +E + + ++GC P+VV + LI V AV V++I++ G PDA++
Sbjct: 198 GKWEEGEKLVTNMCSRGC-EPNVVTYSILISTLCRDGKVEDAVNVLKIMKKKGLTPDAYS 256
Query: 984 YNALISGFCKVNQIGLATKVLDRMKRQFCPPDVVTYNILIGSLCSRGKLGLAMKMFGQLL 805
Y+ L+S FCK ++ LA + LD M C PD+V YN ++ +LC GK A+++F L
Sbjct: 257 YDPLVSAFCKEGRLDLAIEFLDYMISDGCLPDIVNYNTILAALCKSGKADQALQIFENLG 316
Query: 804 E----------------------------------DKSCEPTVITYTILIEATIVEGGIN 727
E K +P ITY LI +G ++
Sbjct: 317 EVGCPPNVSSYNTMFSALWNCGDRVRALGMVSEMVGKGIKPDEITYNSLISCLCRDGMVD 376
Query: 726 EAMKLLNEMSLKGLCPDMYTYNAITRGLCKEGMVDEAIEFVKSLPSRGCEPDVISYNVLL 547
EA+ LL +M G P + +YN I GLCK V +AI+ + + +GC P+ +Y +L+
Sbjct: 377 EAIGLLVDMETGGFQPTVISYNIILLGLCKTRRVVDAIQVLTEMVEKGCRPNETTYILLI 436
Query: 546 RAVLNRGRWSEGERLIAEMIS 484
+ G +E L + S
Sbjct: 437 EGIGFAGWRAEAMELANSVFS 457
>ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297330308|gb|EFH60727.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 598
Score = 580 bits (1496), Expect = e-163
Identities = 277/417 (66%), Positives = 344/417 (82%)
Frame = -3
Query: 1251 ISAETRPADFQSLDFKDTHLLKLFHRSFKAGKLDESLYFLELLINKGCYSPDVVLCTKLI 1072
I E R QSL F+DT +LK+FHRS ++G ESL+ LE ++ KG Y+PDV+LCTKLI
Sbjct: 69 IPTERRQQHSQSLGFRDTQMLKIFHRSCRSGNYIESLHLLETMVRKG-YNPDVILCTKLI 127
Query: 1071 KGFFNSRNVRKAVRVMEILESYGKPDAFAYNALISGFCKVNQIGLATKVLDRMKRQFCPP 892
KGFF RNV KAVRVMEILE +G+PD FAYNALI+GFCK+N+I AT+VLDRM+ + P
Sbjct: 128 KGFFTLRNVPKAVRVMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSP 187
Query: 891 DVVTYNILIGSLCSRGKLGLAMKMFGQLLEDKSCEPTVITYTILIEATIVEGGINEAMKL 712
D VTYNI+IGSLCSRGKL LA+K+ QLL D +C+PTVITYTILIEAT++EGG++EA+KL
Sbjct: 188 DTVTYNIMIGSLCSRGKLDLALKVLDQLLSD-NCQPTVITYTILIEATMLEGGVDEALKL 246
Query: 711 LNEMSLKGLCPDMYTYNAITRGLCKEGMVDEAIEFVKSLPSRGCEPDVISYNVLLRAVLN 532
L+EM +GL PDM+TYN I RG+CKEGMVD A E +++L +GCEPDVISYN+LLRA+LN
Sbjct: 247 LDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLN 306
Query: 531 RGRWSEGERLIAEMISRGCEPNVVTYGILINLFCHDGKVEDAIDVLKVMMEKGLTPDSYS 352
+G+W EGE+L+ +M S C+PNVVTY ILI C DGK+E+A+++LK+M EKGLTPD+YS
Sbjct: 307 QGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYS 366
Query: 351 YDPFISTFCKEGRLDLAIVFLDYMISNGCAPDIVNYNSILSALCKNGNAHQALEIFEKLG 172
YDP I+ FC+EGRLD+AI FL+ MIS+GC PDIVNYN++L+ LCKNG A QALEIF KLG
Sbjct: 367 YDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLG 426
Query: 171 NTGCPPNVSSYNTMISGLWNGGNRIRALGMVLDMVNKGIDPDEITYNSLISCLCRDG 1
GC PN SSYNTM S LW+ G++IRAL M+L+MV+ GIDPDEITYNS+ISCLCR+G
Sbjct: 427 EVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREG 483
Score = 235 bits (599), Expect = 4e-59
Identities = 133/400 (33%), Positives = 216/400 (54%), Gaps = 4/400 (1%)
Frame = -3
Query: 1254 KISAETRPAD-FQSLDFK-DTHLLKLFHRSF-KAGKLDESLYFLELLINKGCYSPDVVLC 1084
+I TR D +S DF DT + S GKLD +L L+ L++ C P V+
Sbjct: 169 RIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSDNC-QPTVITY 227
Query: 1083 TKLIKGFFNSRNVRKAVRVMEILESYG-KPDAFAYNALISGFCKVNQIGLATKVLDRMKR 907
T LI+ V +A+++++ + S G KPD F YN +I G CK + A +++ ++
Sbjct: 228 TILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLEL 287
Query: 906 QFCPPDVVTYNILIGSLCSRGKLGLAMKMFGQLLEDKSCEPTVITYTILIEATIVEGGIN 727
+ C PDV++YNIL+ +L ++GK K+ ++ +K C+P V+TY+ILI +G I
Sbjct: 288 KGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEK-CDPNVVTYSILITTLCRDGKIE 346
Query: 726 EAMKLLNEMSLKGLCPDMYTYNAITRGLCKEGMVDEAIEFVKSLPSRGCEPDVISYNVLL 547
EAM LL M KGL PD Y+Y+ + C+EG +D AIEF++++ S GC PD+++YN +L
Sbjct: 347 EAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVL 406
Query: 546 RAVLNRGRWSEGERLIAEMISRGCEPNVVTYGILINLFCHDGKVEDAIDVLKVMMEKGLT 367
+ G+ + + ++ GC PN +Y + + G A+ ++ M+ G+
Sbjct: 407 ATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGID 466
Query: 366 PDSYSYDPFISTFCKEGRLDLAIVFLDYMISNGCAPDIVNYNSILSALCKNGNAHQALEI 187
PD +Y+ IS C+EG +D A L M S P +V YN +L CK A+++
Sbjct: 467 PDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDV 526
Query: 186 FEKLGNTGCPPNVSSYNTMISGLWNGGNRIRALGMVLDMV 67
+ + GC PN ++Y +I G+ G R A+ + D+V
Sbjct: 527 LDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLV 566
>ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g04760, chloroplastic; Flags: Precursor
gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein
[Arabidopsis thaliana] gi|15810359|gb|AAL07067.1| unknown
protein [Arabidopsis thaliana] gi|22136960|gb|AAM91709.1|
unknown protein [Arabidopsis thaliana]
gi|332640611|gb|AEE74132.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 602
Score = 578 bits (1490), Expect = e-162
Identities = 274/417 (65%), Positives = 344/417 (82%)
Frame = -3
Query: 1251 ISAETRPADFQSLDFKDTHLLKLFHRSFKAGKLDESLYFLELLINKGCYSPDVVLCTKLI 1072
+ E R QSL F+DT +LK+FHRS ++G ESL+ LE ++ KG Y+PDV+LCTKLI
Sbjct: 73 LPTERRQQHSQSLGFRDTQMLKIFHRSCRSGNYIESLHLLETMVRKG-YNPDVILCTKLI 131
Query: 1071 KGFFNSRNVRKAVRVMEILESYGKPDAFAYNALISGFCKVNQIGLATKVLDRMKRQFCPP 892
KGFF RN+ KAVRVMEILE +G+PD FAYNALI+GFCK+N+I AT+VLDRM+ + P
Sbjct: 132 KGFFTLRNIPKAVRVMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSP 191
Query: 891 DVVTYNILIGSLCSRGKLGLAMKMFGQLLEDKSCEPTVITYTILIEATIVEGGINEAMKL 712
D VTYNI+IGSLCSRGKL LA+K+ QLL D +C+PTVITYTILIEAT++EGG++EA+KL
Sbjct: 192 DTVTYNIMIGSLCSRGKLDLALKVLNQLLSD-NCQPTVITYTILIEATMLEGGVDEALKL 250
Query: 711 LNEMSLKGLCPDMYTYNAITRGLCKEGMVDEAIEFVKSLPSRGCEPDVISYNVLLRAVLN 532
++EM +GL PDM+TYN I RG+CKEGMVD A E V++L +GCEPDVISYN+LLRA+LN
Sbjct: 251 MDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLN 310
Query: 531 RGRWSEGERLIAEMISRGCEPNVVTYGILINLFCHDGKVEDAIDVLKVMMEKGLTPDSYS 352
+G+W EGE+L+ +M S C+PNVVTY ILI C DGK+E+A+++LK+M EKGLTPD+YS
Sbjct: 311 QGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYS 370
Query: 351 YDPFISTFCKEGRLDLAIVFLDYMISNGCAPDIVNYNSILSALCKNGNAHQALEIFEKLG 172
YDP I+ FC+EGRLD+AI FL+ MIS+GC PDIVNYN++L+ LCKNG A QALEIF KLG
Sbjct: 371 YDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLG 430
Query: 171 NTGCPPNVSSYNTMISGLWNGGNRIRALGMVLDMVNKGIDPDEITYNSLISCLCRDG 1
GC PN SSYNTM S LW+ G++IRAL M+L+M++ GIDPDEITYNS+ISCLCR+G
Sbjct: 431 EVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREG 487
Score = 236 bits (603), Expect = 1e-59
Identities = 136/400 (34%), Positives = 214/400 (53%), Gaps = 4/400 (1%)
Frame = -3
Query: 1254 KISAETRPAD-FQSLDFK-DTHLLKLFHRSF-KAGKLDESLYFLELLINKGCYSPDVVLC 1084
+I TR D +S DF DT + S GKLD +L L L++ C P V+
Sbjct: 173 RIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNC-QPTVITY 231
Query: 1083 TKLIKGFFNSRNVRKAVRVMEILESYG-KPDAFAYNALISGFCKVNQIGLATKVLDRMKR 907
T LI+ V +A+++M+ + S G KPD F YN +I G CK + A +++ ++
Sbjct: 232 TILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLEL 291
Query: 906 QFCPPDVVTYNILIGSLCSRGKLGLAMKMFGQLLEDKSCEPTVITYTILIEATIVEGGIN 727
+ C PDV++YNIL+ +L ++GK K+ ++ +K C+P V+TY+ILI +G I
Sbjct: 292 KGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEK-CDPNVVTYSILITTLCRDGKIE 350
Query: 726 EAMKLLNEMSLKGLCPDMYTYNAITRGLCKEGMVDEAIEFVKSLPSRGCEPDVISYNVLL 547
EAM LL M KGL PD Y+Y+ + C+EG +D AIEF++++ S GC PD+++YN +L
Sbjct: 351 EAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVL 410
Query: 546 RAVLNRGRWSEGERLIAEMISRGCEPNVVTYGILINLFCHDGKVEDAIDVLKVMMEKGLT 367
+ G+ + + ++ GC PN +Y + + G A+ ++ MM G+
Sbjct: 411 ATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGID 470
Query: 366 PDSYSYDPFISTFCKEGRLDLAIVFLDYMISNGCAPDIVNYNSILSALCKNGNAHQALEI 187
PD +Y+ IS C+EG +D A L M S P +V YN +L CK A+ +
Sbjct: 471 PDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINV 530
Query: 186 FEKLGNTGCPPNVSSYNTMISGLWNGGNRIRALGMVLDMV 67
E + GC PN ++Y +I G+ G R A+ + D+V
Sbjct: 531 LESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLV 570
>ref|XP_006361415.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Solanum tuberosum]
Length = 583
Score = 575 bits (1482), Expect = e-161
Identities = 276/421 (65%), Positives = 347/421 (82%), Gaps = 1/421 (0%)
Frame = -3
Query: 1260 KLKISAETRPADFQSLDFKDTHLLKLFHRSFKAGKLDESLYFLELLINKGCYSPDVVLCT 1081
++KIS+E +++ TH +K+ + S K GK DE+LY LE + G Y PDV+LCT
Sbjct: 52 RVKISSE---------NYRPTHDMKVLNWSCKVGKYDETLYLLECKLKSG-YKPDVILCT 101
Query: 1080 KLIKGFFNSRNVRKAVRVMEILESYGKPDAFAYNALISGFCKVNQIGLATKVLDRMKRQF 901
KLIKGF NS+N K V+VM+ILE +G+PD FAYNALISGFCK+N+I A KVL+RMK +
Sbjct: 102 KLIKGFCNSKNSDKGVKVMQILEQFGEPDVFAYNALISGFCKMNKIEEANKVLNRMKARG 161
Query: 900 CPPDVVTYNILIGSLCSRGKLGLAMKMFGQLLEDKSCEPTVITYTILIEATIVEGGINEA 721
PPD VTYNILIGSLC RGKLG A+K+ QL E+ +C+PTVITYTILIEATI+EGGI+EA
Sbjct: 162 FPPDSVTYNILIGSLCDRGKLGSALKLLDQLKEENNCKPTVITYTILIEATILEGGIHEA 221
Query: 720 MKLLNEMSLKGLCPDMYTYNAITRGLCKEGMVDEAIEFVKSLPSRGCEPDVISYNVLLRA 541
MKLL+EM +GL PDMYTYNAI RG+C+E M+D+A EFV+SLPS+GC+PDVISYN+LLRA
Sbjct: 222 MKLLDEMLSRGLQPDMYTYNAIIRGMCREKMMDQAYEFVRSLPSKGCKPDVISYNILLRA 281
Query: 540 VL-NRGRWSEGERLIAEMISRGCEPNVVTYGILINLFCHDGKVEDAIDVLKVMMEKGLTP 364
+L ++G+WS+GE+L+ EM+S GCEPNVVTY IL++ C DGK+++AI++LK+MM+KGLTP
Sbjct: 282 LLHHKGKWSDGEKLMNEMLSAGCEPNVVTYSILMSALCRDGKLDEAINLLKIMMDKGLTP 341
Query: 363 DSYSYDPFISTFCKEGRLDLAIVFLDYMISNGCAPDIVNYNSILSALCKNGNAHQALEIF 184
D+++YDP IS FCK GRLDLAI FLDYMISNGC PDIVNYN+ILS +CK G A +A+E+F
Sbjct: 342 DTFTYDPLISAFCKGGRLDLAIKFLDYMISNGCLPDIVNYNTILSTMCKKGKADEAMEVF 401
Query: 183 EKLGNTGCPPNVSSYNTMISGLWNGGNRIRALGMVLDMVNKGIDPDEITYNSLISCLCRD 4
EKL GCPP+VS+YNT++S LWN G R RAL MV +M+ KG+DPDEITYN+LISCLCRD
Sbjct: 402 EKLAEIGCPPDVSTYNTLMSALWNNGGRARALKMVSEMIEKGVDPDEITYNALISCLCRD 461
Query: 3 G 1
G
Sbjct: 462 G 462
Score = 225 bits (574), Expect = 3e-56
Identities = 120/369 (32%), Positives = 208/369 (56%), Gaps = 2/369 (0%)
Frame = -3
Query: 1161 GKLDESLYFLELLINKGCYSPDVVLCTKLIKGFFNSRNVRKAVRVMEILESYG-KPDAFA 985
GKL +L L+ L + P V+ T LI+ + +A+++++ + S G +PD +
Sbjct: 180 GKLGSALKLLDQLKEENNCKPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQPDMYT 239
Query: 984 YNALISGFCKVNQIGLATKVLDRMKRQFCPPDVVTYNILIGSLCS-RGKLGLAMKMFGQL 808
YNA+I G C+ + A + + + + C PDV++YNIL+ +L +GK K+ ++
Sbjct: 240 YNAIIRGMCREKMMDQAYEFVRSLPSKGCKPDVISYNILLRALLHHKGKWSDGEKLMNEM 299
Query: 807 LEDKSCEPTVITYTILIEATIVEGGINEAMKLLNEMSLKGLCPDMYTYNAITRGLCKEGM 628
L CEP V+TY+IL+ A +G ++EA+ LL M KGL PD +TY+ + CK G
Sbjct: 300 LS-AGCEPNVVTYSILMSALCRDGKLDEAINLLKIMMDKGLTPDTFTYDPLISAFCKGGR 358
Query: 627 VDEAIEFVKSLPSRGCEPDVISYNVLLRAVLNRGRWSEGERLIAEMISRGCEPNVVTYGI 448
+D AI+F+ + S GC PD+++YN +L + +G+ E + ++ GC P+V TY
Sbjct: 359 LDLAIKFLDYMISNGCLPDIVNYNTILSTMCKKGKADEAMEVFEKLAEIGCPPDVSTYNT 418
Query: 447 LINLFCHDGKVEDAIDVLKVMMEKGLTPDSYSYDPFISTFCKEGRLDLAIVFLDYMISNG 268
L++ ++G A+ ++ M+EKG+ PD +Y+ IS C++G ++ A+ L M NG
Sbjct: 419 LMSALWNNGGRARALKMVSEMIEKGVDPDEITYNALISCLCRDGMVNEALDLLGDMEGNG 478
Query: 267 CAPDIVNYNSILSALCKNGNAHQALEIFEKLGNTGCPPNVSSYNTMISGLWNGGNRIRAL 88
P ++ YN +L LCK +A+E+ ++ G PN ++Y +I G+ G R++A+
Sbjct: 479 FPPTVITYNILLLGLCKAHRVVEAIEVLAEMVEKGRRPNETTYILLIEGIGFSGRRVQAM 538
Query: 87 GMVLDMVNK 61
M + +K
Sbjct: 539 EMASAIYHK 547
>dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
Length = 602
Score = 574 bits (1480), Expect = e-161
Identities = 273/417 (65%), Positives = 343/417 (82%)
Frame = -3
Query: 1251 ISAETRPADFQSLDFKDTHLLKLFHRSFKAGKLDESLYFLELLINKGCYSPDVVLCTKLI 1072
+ E R QSL F+DT +LK+FHRS ++G ESL+ LE ++ KG Y+PDV+LCTKLI
Sbjct: 73 LPTERRQQHSQSLGFRDTQMLKIFHRSCRSGNYIESLHLLETMVRKG-YNPDVILCTKLI 131
Query: 1071 KGFFNSRNVRKAVRVMEILESYGKPDAFAYNALISGFCKVNQIGLATKVLDRMKRQFCPP 892
KGFF RN+ KAVRVMEILE +G+PD FAYNALI+GFCK+N+I AT+VLDRM+ + P
Sbjct: 132 KGFFTLRNIPKAVRVMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSP 191
Query: 891 DVVTYNILIGSLCSRGKLGLAMKMFGQLLEDKSCEPTVITYTILIEATIVEGGINEAMKL 712
D VTYNI+IGSLCSRGKL LA+K+ QLL D +C+PTVITYTILIEAT++EGG++EA+KL
Sbjct: 192 DTVTYNIMIGSLCSRGKLDLALKVLNQLLSD-NCQPTVITYTILIEATMLEGGVDEALKL 250
Query: 711 LNEMSLKGLCPDMYTYNAITRGLCKEGMVDEAIEFVKSLPSRGCEPDVISYNVLLRAVLN 532
++EM +GL PDM+TYN I RG+CKEGMVD A E V++L +G EPDVISYN+LLRA+LN
Sbjct: 251 MDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLN 310
Query: 531 RGRWSEGERLIAEMISRGCEPNVVTYGILINLFCHDGKVEDAIDVLKVMMEKGLTPDSYS 352
+G+W EGE+L+ +M S C+PNVVTY ILI C DGK+E+A+++LK+M EKGLTPD+YS
Sbjct: 311 QGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYS 370
Query: 351 YDPFISTFCKEGRLDLAIVFLDYMISNGCAPDIVNYNSILSALCKNGNAHQALEIFEKLG 172
YDP I+ FC+EGRLD+AI FL+ MIS+GC PDIVNYN++L+ LCKNG A QALEIF KLG
Sbjct: 371 YDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLG 430
Query: 171 NTGCPPNVSSYNTMISGLWNGGNRIRALGMVLDMVNKGIDPDEITYNSLISCLCRDG 1
GC PN SSYNTM S LW+ G++IRAL M+L+M++ GIDPDEITYNS+ISCLCR+G
Sbjct: 431 EVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREG 487
Score = 233 bits (593), Expect = 2e-58
Identities = 135/400 (33%), Positives = 213/400 (53%), Gaps = 4/400 (1%)
Frame = -3
Query: 1254 KISAETRPAD-FQSLDFK-DTHLLKLFHRSF-KAGKLDESLYFLELLINKGCYSPDVVLC 1084
+I TR D +S DF DT + S GKLD +L L L++ C P V+
Sbjct: 173 RIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNC-QPTVITY 231
Query: 1083 TKLIKGFFNSRNVRKAVRVMEILESYG-KPDAFAYNALISGFCKVNQIGLATKVLDRMKR 907
T LI+ V +A+++M+ + S G KPD F YN +I G CK + A +++ ++
Sbjct: 232 TILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLEL 291
Query: 906 QFCPPDVVTYNILIGSLCSRGKLGLAMKMFGQLLEDKSCEPTVITYTILIEATIVEGGIN 727
+ PDV++YNIL+ +L ++GK K+ ++ +K C+P V+TY+ILI +G I
Sbjct: 292 KGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEK-CDPNVVTYSILITTLCRDGKIE 350
Query: 726 EAMKLLNEMSLKGLCPDMYTYNAITRGLCKEGMVDEAIEFVKSLPSRGCEPDVISYNVLL 547
EAM LL M KGL PD Y+Y+ + C+EG +D AIEF++++ S GC PD+++YN +L
Sbjct: 351 EAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVL 410
Query: 546 RAVLNRGRWSEGERLIAEMISRGCEPNVVTYGILINLFCHDGKVEDAIDVLKVMMEKGLT 367
+ G+ + + ++ GC PN +Y + + G A+ ++ MM G+
Sbjct: 411 ATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGID 470
Query: 366 PDSYSYDPFISTFCKEGRLDLAIVFLDYMISNGCAPDIVNYNSILSALCKNGNAHQALEI 187
PD +Y+ IS C+EG +D A L M S P +V YN +L CK A+ +
Sbjct: 471 PDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINV 530
Query: 186 FEKLGNTGCPPNVSSYNTMISGLWNGGNRIRALGMVLDMV 67
E + GC PN ++Y +I G+ G R A+ + D+V
Sbjct: 531 LESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLV 570
>ref|XP_006296608.1| hypothetical protein CARUB_v10013258mg [Capsella rubella]
gi|482565317|gb|EOA29506.1| hypothetical protein
CARUB_v10013258mg [Capsella rubella]
Length = 607
Score = 574 bits (1479), Expect = e-161
Identities = 273/406 (67%), Positives = 340/406 (83%)
Frame = -3
Query: 1218 SLDFKDTHLLKLFHRSFKAGKLDESLYFLELLINKGCYSPDVVLCTKLIKGFFNSRNVRK 1039
SL F+DT +LK+FHRS ++G ESL+ LE ++ KG Y+PDV+LCTKLIKGFF RN+ K
Sbjct: 88 SLGFRDTQMLKIFHRSCRSGNYIESLHLLESMVRKG-YNPDVILCTKLIKGFFTLRNIPK 146
Query: 1038 AVRVMEILESYGKPDAFAYNALISGFCKVNQIGLATKVLDRMKRQFCPPDVVTYNILIGS 859
AVRVMEILE +G+PD FAYNALI+GFCK+N+I AT+VLDRM+ + PD VTYNI+IGS
Sbjct: 147 AVRVMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKGFSPDTVTYNIMIGS 206
Query: 858 LCSRGKLGLAMKMFGQLLEDKSCEPTVITYTILIEATIVEGGINEAMKLLNEMSLKGLCP 679
LCSRGKL LA+K+ QLL D +C+PTVITYTILIEAT++EGG++EA+KLL+EM +GL P
Sbjct: 207 LCSRGKLVLALKVLDQLLSD-NCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKP 265
Query: 678 DMYTYNAITRGLCKEGMVDEAIEFVKSLPSRGCEPDVISYNVLLRAVLNRGRWSEGERLI 499
DM+TYN I RG+CKEGMVD A E V++L RGCEPDVISYN+LLRA+LN+G+W EGE+L+
Sbjct: 266 DMFTYNTIIRGMCKEGMVDRAFEMVRNLELRGCEPDVISYNILLRALLNQGKWEEGEKLM 325
Query: 498 AEMISRGCEPNVVTYGILINLFCHDGKVEDAIDVLKVMMEKGLTPDSYSYDPFISTFCKE 319
+M S C+PNVVTY ILI C DGK+E+A+++LK+M EKGL+PD+YSYDP I+ FC+E
Sbjct: 326 TKMFSEKCDPNVVTYSILITTLCRDGKIEEALNLLKLMKEKGLSPDAYSYDPLIAAFCRE 385
Query: 318 GRLDLAIVFLDYMISNGCAPDIVNYNSILSALCKNGNAHQALEIFEKLGNTGCPPNVSSY 139
GRLDLAI FL+ MIS+GC PDIVNYN++L+ LCKNG A QALEIF KLG GC PN SSY
Sbjct: 386 GRLDLAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSY 445
Query: 138 NTMISGLWNGGNRIRALGMVLDMVNKGIDPDEITYNSLISCLCRDG 1
NTM S LW+ G++IRAL M+ +MV++GIDPDEITYNS+ISCLCR+G
Sbjct: 446 NTMFSALWSSGDKIRALHMISEMVSQGIDPDEITYNSMISCLCREG 491
Score = 232 bits (591), Expect = 4e-58
Identities = 123/366 (33%), Positives = 203/366 (55%), Gaps = 1/366 (0%)
Frame = -3
Query: 1161 GKLDESLYFLELLINKGCYSPDVVLCTKLIKGFFNSRNVRKAVRVMEILESYG-KPDAFA 985
GKL +L L+ L++ C P V+ T LI+ V +A+++++ + S G KPD F
Sbjct: 211 GKLVLALKVLDQLLSDNC-QPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFT 269
Query: 984 YNALISGFCKVNQIGLATKVLDRMKRQFCPPDVVTYNILIGSLCSRGKLGLAMKMFGQLL 805
YN +I G CK + A +++ ++ + C PDV++YNIL+ +L ++GK K+ ++
Sbjct: 270 YNTIIRGMCKEGMVDRAFEMVRNLELRGCEPDVISYNILLRALLNQGKWEEGEKLMTKMF 329
Query: 804 EDKSCEPTVITYTILIEATIVEGGINEAMKLLNEMSLKGLCPDMYTYNAITRGLCKEGMV 625
+K C+P V+TY+ILI +G I EA+ LL M KGL PD Y+Y+ + C+EG +
Sbjct: 330 SEK-CDPNVVTYSILITTLCRDGKIEEALNLLKLMKEKGLSPDAYSYDPLIAAFCREGRL 388
Query: 624 DEAIEFVKSLPSRGCEPDVISYNVLLRAVLNRGRWSEGERLIAEMISRGCEPNVVTYGIL 445
D AIEF++++ S GC PD+++YN +L + G+ + + ++ GC PN +Y +
Sbjct: 389 DLAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTM 448
Query: 444 INLFCHDGKVEDAIDVLKVMMEKGLTPDSYSYDPFISTFCKEGRLDLAIVFLDYMISNGC 265
+ G A+ ++ M+ +G+ PD +Y+ IS C+EG +D A L M S
Sbjct: 449 FSALWSSGDKIRALHMISEMVSQGIDPDEITYNSMISCLCREGMVDEAFDLLVDMRSCEF 508
Query: 264 APDIVNYNSILSALCKNGNAHQALEIFEKLGNTGCPPNVSSYNTMISGLWNGGNRIRALG 85
P +V YN +L CK A+++ E + GC PN S+Y +I G+ G R A+
Sbjct: 509 HPSVVTYNIVLLGFCKAHRIEDAIDVLESMVGNGCRPNESTYTVLIEGIGFAGYRAEAME 568
Query: 84 MVLDMV 67
+ D+V
Sbjct: 569 LANDLV 574
>ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Cucumis sativus]
Length = 581
Score = 572 bits (1474), Expect = e-160
Identities = 280/464 (60%), Positives = 359/464 (77%)
Frame = -3
Query: 1392 IFSTDFFSHSIPFNTTITKPSHQNLIINSLXXXXXXXXXXXXXPKLKISAETRPADFQSL 1213
+FS++F S+ F + KP+ +S+ + SAE R F +L
Sbjct: 1 MFSSEFLPQSLHFTNPLAKPTIPQSRSDSIPACRFSNKTHLR--NVTSSAEFRQPHFPNL 58
Query: 1212 DFKDTHLLKLFHRSFKAGKLDESLYFLELLINKGCYSPDVVLCTKLIKGFFNSRNVRKAV 1033
D +D HL+KL +RS +AGK +ESLYFLE +++KG + PDVVLCTKLIKGFFNSRN++KA+
Sbjct: 59 DNRDAHLMKLLNRSCRAGKHNESLYFLESVVSKG-FKPDVVLCTKLIKGFFNSRNLKKAM 117
Query: 1032 RVMEILESYGKPDAFAYNALISGFCKVNQIGLATKVLDRMKRQFCPPDVVTYNILIGSLC 853
RVMEILE+YG PD ++YNA+ISGF K NQI A +V DRM+ + PDVVTYNI+IGSLC
Sbjct: 118 RVMEILETYGDPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLC 177
Query: 852 SRGKLGLAMKMFGQLLEDKSCEPTVITYTILIEATIVEGGINEAMKLLNEMSLKGLCPDM 673
SRGKL LA ++ +LL+D C+P+VITYTILIEATI+EG INEA++L +E+ +GL PD+
Sbjct: 178 SRGKLELAFEVMDELLKD-GCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDL 236
Query: 672 YTYNAITRGLCKEGMVDEAIEFVKSLPSRGCEPDVISYNVLLRAVLNRGRWSEGERLIAE 493
YTYNAI RG+CKEGM D A++FV+ L +RGC PDV+SYN+LLR+ LN+ RW +GERL+ +
Sbjct: 237 YTYNAIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKD 296
Query: 492 MISRGCEPNVVTYGILINLFCHDGKVEDAIDVLKVMMEKGLTPDSYSYDPFISTFCKEGR 313
M+ GCEPNVVT+ ILI+ FC +G+V +A++VL+VM EKGLTPDSYSYDP IS FCKEGR
Sbjct: 297 MVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGR 356
Query: 312 LDLAIVFLDYMISNGCAPDIVNYNSILSALCKNGNAHQALEIFEKLGNTGCPPNVSSYNT 133
LDLAI +L+ M+S+GC PDIVNYN+IL+ LCK G A AL++FEKL GCPP V +YNT
Sbjct: 357 LDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNT 416
Query: 132 MISGLWNGGNRIRALGMVLDMVNKGIDPDEITYNSLISCLCRDG 1
M S LW+ GN+I+AL M+ +M+ KGIDPDEITYNSLISCLCRDG
Sbjct: 417 MFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDG 460
Score = 174 bits (440), Expect = 1e-40
Identities = 109/369 (29%), Positives = 179/369 (48%), Gaps = 36/369 (9%)
Frame = -3
Query: 1161 GKLDESLYFLELLINKGCYSPDVVLCTKLIKGFFNSRNVRKAVRVMEILESYG-KPDAFA 985
GKL+ + ++ L+ GC P V+ T LI+ + +A+ + + L S G +PD +
Sbjct: 180 GKLELAFEVMDELLKDGC-KPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYT 238
Query: 984 YNALISGFCKVNQIGLATKVLDRMKRQFCPPDVVTYNILIGSLCSRGKLGLAMKMFGQLL 805
YNA+I G CK A + + + C PDVV+YNIL+ S ++ + ++ ++
Sbjct: 239 YNAIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMV 298
Query: 804 EDKSCEPTVITYTILIEATIVEGGINEAMKLLNEMSLKGLCPDMYTYNAITRGLCKEGMV 625
CEP V+T++ILI + EG + EA+ +L M KGL PD Y+Y+ + CKEG +
Sbjct: 299 LS-GCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRL 357
Query: 624 DEAIEFVKSLPSRGCEPD-----------------------------------VISYNVL 550
D AIE+++ + S GC PD V +YN +
Sbjct: 358 DLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTM 417
Query: 549 LRAVLNRGRWSEGERLIAEMISRGCEPNVVTYGILINLFCHDGKVEDAIDVLKVMMEKGL 370
A+ + G + +I+EMI +G +P+ +TY LI+ C DG V++AI +L M
Sbjct: 418 FSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRF 477
Query: 369 TPDSYSYDPFISTFCKEGRLDLAIVFLDYMISNGCAPDIVNYNSILSALCKNGNAHQALE 190
P S++ + CK R+ I L M+ GC P+ +Y ++ + G +A+E
Sbjct: 478 QPTVISFNIVLLGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRAEAME 537
Query: 189 IFEKLGNTG 163
+ L G
Sbjct: 538 LANSLYRLG 546
Score = 160 bits (406), Expect = 1e-36
Identities = 87/253 (34%), Positives = 147/253 (58%), Gaps = 1/253 (0%)
Frame = -3
Query: 1125 LINKGCYSPDVVLCTKLIKGFFNSRNVRKAVRVMEILESYG-KPDAFAYNALISGFCKVN 949
++ GC P+VV + LI F VR+AV V+E+++ G PD+++Y+ LIS FCK
Sbjct: 297 MVLSGC-EPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEG 355
Query: 948 QIGLATKVLDRMKRQFCPPDVVTYNILIGSLCSRGKLGLAMKMFGQLLEDKSCEPTVITY 769
++ LA + L++M C PD+V YN ++ +LC G LA+ +F + L++ C PTV Y
Sbjct: 356 RLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVF-EKLDEVGCPPTVRAY 414
Query: 768 TILIEATIVEGGINEAMKLLNEMSLKGLCPDMYTYNAITRGLCKEGMVDEAIEFVKSLPS 589
+ A G +A+++++EM KG+ PD TYN++ LC++G+VDEAI + + +
Sbjct: 415 NTMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEA 474
Query: 588 RGCEPDVISYNVLLRAVLNRGRWSEGERLIAEMISRGCEPNVVTYGILINLFCHDGKVED 409
+P VIS+N++L + R EG L+ M+ +GC PN +Y +LI + G +
Sbjct: 475 TRFQPTVISFNIVLLGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRAE 534
Query: 408 AIDVLKVMMEKGL 370
A+++ + G+
Sbjct: 535 AMELANSLYRLGV 547
>ref|XP_004236781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Solanum lycopersicum]
Length = 575
Score = 570 bits (1469), Expect = e-160
Identities = 279/461 (60%), Positives = 352/461 (76%), Gaps = 5/461 (1%)
Frame = -3
Query: 1368 HSIPFNTTITKP----SHQNLIINSLXXXXXXXXXXXXXPKLKISAETRPADFQSLDFKD 1201
H PF + KP S N ++ ++KIS+E R
Sbjct: 8 HQCPFFSNNLKPKSESSKHNFVVRCSISNEESRVNIRNPQRVKISSENR----------G 57
Query: 1200 THLLKLFHRSFKAGKLDESLYFLELLINKGCYSPDVVLCTKLIKGFFNSRNVRKAVRVME 1021
+H +K+ + S K GK DE+LY LE + G Y PDV+LCTKLIKGFFNS+N K V+VM+
Sbjct: 58 SHDMKVLNWSCKVGKYDETLYLLECKVKSG-YKPDVILCTKLIKGFFNSKNSDKGVKVMQ 116
Query: 1020 ILESYGKPDAFAYNALISGFCKVNQIGLATKVLDRMKRQFCPPDVVTYNILIGSLCSRGK 841
ILE +G+PD FAYNAL+SGFCK+N+I A KVL+RMK PPD VTYNILIGSLC RGK
Sbjct: 117 ILEQFGEPDVFAYNALVSGFCKMNKIEEANKVLNRMKTHGFPPDSVTYNILIGSLCDRGK 176
Query: 840 LGLAMKMFGQLLEDKSCEPTVITYTILIEATIVEGGINEAMKLLNEMSLKGLCPDMYTYN 661
LG A+ + QL E+ +C+PTVITYTILIEATI+EGGI+EAMKLL+EM GL PDMYTYN
Sbjct: 177 LGSALMLLDQLKEEHNCKPTVITYTILIEATILEGGIHEAMKLLDEMLSIGLQPDMYTYN 236
Query: 660 AITRGLCKEGMVDEAIEFVKSLPSRGCEPDVISYNVLLRAVL-NRGRWSEGERLIAEMIS 484
AI RG+C+E M+D+A EFV+SLPS+GC+PDVISYN+LLRA+L +RG+WS+GE+L+ EM+
Sbjct: 237 AIIRGMCREKMMDQAYEFVRSLPSKGCKPDVISYNILLRALLHHRGKWSDGEKLMNEMLC 296
Query: 483 RGCEPNVVTYGILINLFCHDGKVEDAIDVLKVMMEKGLTPDSYSYDPFISTFCKEGRLDL 304
GCEPNVVTY IL++ C DGK+++AI++LK+M++KGLTPD+++YDP IS FCK GRLD+
Sbjct: 297 AGCEPNVVTYSILMSALCRDGKLDEAINLLKIMVDKGLTPDTFTYDPLISAFCKGGRLDM 356
Query: 303 AIVFLDYMISNGCAPDIVNYNSILSALCKNGNAHQALEIFEKLGNTGCPPNVSSYNTMIS 124
AI FLDYMI+NGC PDIVNYN+ILS +CK G A +A+E+FEKL GCPP+VS+YNT++S
Sbjct: 357 AIKFLDYMITNGCLPDIVNYNTILSTMCKKGKADEAMEVFEKLAEIGCPPDVSTYNTLMS 416
Query: 123 GLWNGGNRIRALGMVLDMVNKGIDPDEITYNSLISCLCRDG 1
LWN G R RAL MV +M+ KG+DPDEITYN+LISCLCRDG
Sbjct: 417 ALWNNGGRARALKMVSEMIEKGVDPDEITYNALISCLCRDG 457
Score = 229 bits (584), Expect = 2e-57
Identities = 121/369 (32%), Positives = 209/369 (56%), Gaps = 2/369 (0%)
Frame = -3
Query: 1161 GKLDESLYFLELLINKGCYSPDVVLCTKLIKGFFNSRNVRKAVRVMEILESYG-KPDAFA 985
GKL +L L+ L + P V+ T LI+ + +A+++++ + S G +PD +
Sbjct: 175 GKLGSALMLLDQLKEEHNCKPTVITYTILIEATILEGGIHEAMKLLDEMLSIGLQPDMYT 234
Query: 984 YNALISGFCKVNQIGLATKVLDRMKRQFCPPDVVTYNILIGSLCS-RGKLGLAMKMFGQL 808
YNA+I G C+ + A + + + + C PDV++YNIL+ +L RGK K+ ++
Sbjct: 235 YNAIIRGMCREKMMDQAYEFVRSLPSKGCKPDVISYNILLRALLHHRGKWSDGEKLMNEM 294
Query: 807 LEDKSCEPTVITYTILIEATIVEGGINEAMKLLNEMSLKGLCPDMYTYNAITRGLCKEGM 628
L CEP V+TY+IL+ A +G ++EA+ LL M KGL PD +TY+ + CK G
Sbjct: 295 L-CAGCEPNVVTYSILMSALCRDGKLDEAINLLKIMVDKGLTPDTFTYDPLISAFCKGGR 353
Query: 627 VDEAIEFVKSLPSRGCEPDVISYNVLLRAVLNRGRWSEGERLIAEMISRGCEPNVVTYGI 448
+D AI+F+ + + GC PD+++YN +L + +G+ E + ++ GC P+V TY
Sbjct: 354 LDMAIKFLDYMITNGCLPDIVNYNTILSTMCKKGKADEAMEVFEKLAEIGCPPDVSTYNT 413
Query: 447 LINLFCHDGKVEDAIDVLKVMMEKGLTPDSYSYDPFISTFCKEGRLDLAIVFLDYMISNG 268
L++ ++G A+ ++ M+EKG+ PD +Y+ IS C++G ++ A+ L M NG
Sbjct: 414 LMSALWNNGGRARALKMVSEMIEKGVDPDEITYNALISCLCRDGMVNEALDLLGDMEGNG 473
Query: 267 CAPDIVNYNSILSALCKNGNAHQALEIFEKLGNTGCPPNVSSYNTMISGLWNGGNRIRAL 88
P ++ YN +L LCK +A+E+ ++ GC PN ++Y +I G+ G R++A+
Sbjct: 474 FPPTVITYNILLLGLCKAHRVVEAIEVLAEMVEKGCRPNETTYILLIEGIGFSGRRVQAM 533
Query: 87 GMVLDMVNK 61
M + +K
Sbjct: 534 EMATAIYHK 542
>ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480008|gb|AES61211.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 590
Score = 553 bits (1424), Expect = e-155
Identities = 270/478 (56%), Positives = 350/478 (73%), Gaps = 12/478 (2%)
Frame = -3
Query: 1398 MAIFSTDFFSHSIPFNTTITKPSHQNLII-----------NSLXXXXXXXXXXXXXPKLK 1252
M FST+F SH++ F + S N II N+ + +
Sbjct: 1 MTTFSTEFLSHTLNFRIHTSSHSKPNTIIITSSILFLNEANNNNNKRRRRTNNNEQQQFR 60
Query: 1251 ISAETRPADF-QSLDFKDTHLLKLFHRSFKAGKLDESLYFLELLINKGCYSPDVVLCTKL 1075
++ ET+P Q DF+DT+ +K +RS K+ K DESLYFL+ ++N+G Y PDV+LCTKL
Sbjct: 61 VN-ETKPTKHDQDYDFRDTNFMKTLNRSCKSAKYDESLYFLQHMVNRG-YKPDVILCTKL 118
Query: 1074 IKGFFNSRNVRKAVRVMEILESYGKPDAFAYNALISGFCKVNQIGLATKVLDRMKRQFCP 895
IKGFFN + + KA++VMEILE +GKPD FAYNA+ISGFCK +++ A+KVLDRMK++
Sbjct: 119 IKGFFNMKKIEKAIQVMEILEKHGKPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFE 178
Query: 894 PDVVTYNILIGSLCSRGKLGLAMKMFGQLLEDKSCEPTVITYTILIEATIVEGGINEAMK 715
PDVVTYNILIG+ C RG+L LA+++ QLL+D +C+PTVITYTILIEATI +GGI+EAMK
Sbjct: 179 PDVVTYNILIGNFCGRGRLDLALRVMDQLLKD-NCKPTVITYTILIEATITQGGIDEAMK 237
Query: 714 LLNEMSLKGLCPDMYTYNAITRGLCKEGMVDEAIEFVKSLPSRGCEPDVISYNVLLRAVL 535
LL+EM +GL PD YTYN + G+CKEGM+D A EF+ + GC V +YN+LLR +L
Sbjct: 238 LLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLL 297
Query: 534 NRGRWSEGERLIAEMISRGCEPNVVTYGILINLFCHDGKVEDAIDVLKVMMEKGLTPDSY 355
N G+W GE+L+++M+ +GCEPN +TY LI C DGK+++A +VLKVM EK L PD Y
Sbjct: 298 NEGKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGY 357
Query: 354 SYDPFISTFCKEGRLDLAIVFLDYMISNGCAPDIVNYNSILSALCKNGNAHQALEIFEKL 175
SYDP IS C+EG++DLAI FLD MIS G PDI++YNSIL++LCKNGNA +AL IFEKL
Sbjct: 358 SYDPLISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKL 417
Query: 174 GNTGCPPNVSSYNTMISGLWNGGNRIRALGMVLDMVNKGIDPDEITYNSLISCLCRDG 1
G GCPPN SYNT+ LW+ G++IRALGM+L+M++ GIDPDEITYNSLISCLCRDG
Sbjct: 418 GEVGCPPNAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDG 475
Score = 221 bits (562), Expect = 8e-55
Identities = 124/368 (33%), Positives = 196/368 (53%), Gaps = 2/368 (0%)
Frame = -3
Query: 1161 GKLDESLYFLELLINKGCYSPDVVLCTKLIKGFFNSRNVRKAVRVMEILESYG-KPDAFA 985
G+LD +L ++ L+ C P V+ T LI+ + +A+++++ + S G +PD +
Sbjct: 195 GRLDLALRVMDQLLKDNC-KPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYT 253
Query: 984 YNALISGFCKVNQIGLATKVLDRMKRQFCPPDVVTYNILIGSLCSRGKLGLAMKMFGQLL 805
YN +++G CK + A + L R+ + C V TYNIL+ L + GK K+ +L
Sbjct: 254 YNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDML 313
Query: 804 EDKSCEPTVITYTILIEATIVEGGINEAMKLLNEMSLKGLCPDMYTYNAITRGLCKEGMV 625
K CEP ITY+ LI A +G I+EA +L M K L PD Y+Y+ + LC+EG V
Sbjct: 314 V-KGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKV 372
Query: 624 DEAIEFVKSLPSRGCEPDVISYNVLLRAVLNRGRWSEGERLIAEMISRGCEPNVVTYGIL 445
D AIEF+ + S G PD++SYN +L ++ G E + ++ GC PN +Y L
Sbjct: 373 DLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTL 432
Query: 444 INLFCHDGKVEDAIDVLKVMMEKGLTPDSYSYDPFISTFCKEGRLDLAIVFL-DYMISNG 268
G A+ ++ M+ G+ PD +Y+ IS C++G +D AI L D S
Sbjct: 433 FGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEK 492
Query: 267 CAPDIVNYNSILSALCKNGNAHQALEIFEKLGNTGCPPNVSSYNTMISGLWNGGNRIRAL 88
C P +++YN++L LCK A+E+ + N GC PN ++Y +I G+ G R A+
Sbjct: 493 CQPTVISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGIGFAGWRYDAM 552
Query: 87 GMVLDMVN 64
+ +VN
Sbjct: 553 ELANLLVN 560
Score = 79.7 bits (195), Expect = 3e-12
Identities = 55/196 (28%), Positives = 100/196 (51%), Gaps = 5/196 (2%)
Frame = -3
Query: 1167 KAGKLDESLYFLELLINKGCYSPDVVLCTKLIKGFFNSRNVRKAVRVMEILESYG-KPDA 991
+ GK+D ++ FL+ +I+ G + PD++ ++ + N +A+ + E L G P+A
Sbjct: 368 REGKVDLAIEFLDDMISGG-HLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNA 426
Query: 990 FAYN----ALISGFCKVNQIGLATKVLDRMKRQFCPPDVVTYNILIGSLCSRGKLGLAMK 823
+YN AL S K+ +G+ ++L PD +TYN LI LC G + A++
Sbjct: 427 GSYNTLFGALWSSGDKIRALGMILEMLSNG----IDPDEITYNSLISCLCRDGLVDQAIE 482
Query: 822 MFGQLLEDKSCEPTVITYTILIEATIVEGGINEAMKLLNEMSLKGLCPDMYTYNAITRGL 643
+ + E + C+PTVI+Y ++ I +A+++L M +G P+ TY + +G+
Sbjct: 483 LLVDMFESEKCQPTVISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGI 542
Query: 642 CKEGMVDEAIEFVKSL 595
G +A+E L
Sbjct: 543 GFAGWRYDAMELANLL 558
>ref|XP_006375855.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550324943|gb|ERP53652.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 479
Score = 537 bits (1384), Expect = e-150
Identities = 251/369 (68%), Positives = 311/369 (84%)
Frame = -3
Query: 1107 YSPDVVLCTKLIKGFFNSRNVRKAVRVMEILESYGKPDAFAYNALISGFCKVNQIGLATK 928
Y PDV+LCTKLIKGFFNSRN+ KA RVM ILE +GKPD FAYNA+ISGFCK N+I A
Sbjct: 6 YQPDVILCTKLIKGFFNSRNIDKATRVMGILEKHGKPDVFAYNAVISGFCKANRIESAKT 65
Query: 927 VLDRMKRQFCPPDVVTYNILIGSLCSRGKLGLAMKMFGQLLEDKSCEPTVITYTILIEAT 748
VLDRMKR+ PDVVT+NI+IG+ C +GK+ LA+K+F +LL+D +C+PT+ITYTILIEA
Sbjct: 66 VLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEAY 125
Query: 747 IVEGGINEAMKLLNEMSLKGLCPDMYTYNAITRGLCKEGMVDEAIEFVKSLPSRGCEPDV 568
I+EGGI+EA+KLL+EM +GL PD +TYN ITRGLCKEG VD A EFV++L SRGC+PDV
Sbjct: 126 ILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDV 185
Query: 567 ISYNVLLRAVLNRGRWSEGERLIAEMISRGCEPNVVTYGILINLFCHDGKVEDAIDVLKV 388
I+YN+LLRA+LN+G+W EGE+ ++E+ SRGCEPNVVTY ILI+ C DGK+E++++++KV
Sbjct: 186 ITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKV 245
Query: 387 MMEKGLTPDSYSYDPFISTFCKEGRLDLAIVFLDYMISNGCAPDIVNYNSILSALCKNGN 208
M EKGLTPD+Y YDP I+ FC+EG+LD+AI FLD MI +G PDIVNYN+I++ALCKNGN
Sbjct: 246 MKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGN 305
Query: 207 AHQALEIFEKLGNTGCPPNVSSYNTMISGLWNGGNRIRALGMVLDMVNKGIDPDEITYNS 28
A+EIF KL GCPPNVSSYNTM+S LW+ G+R RALGM+ M++KGIDPD ITYNS
Sbjct: 306 GDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNS 365
Query: 27 LISCLCRDG 1
LISCLCRDG
Sbjct: 366 LISCLCRDG 374
Score = 221 bits (562), Expect = 8e-55
Identities = 112/349 (32%), Positives = 191/349 (54%), Gaps = 1/349 (0%)
Frame = -3
Query: 1161 GKLDESLYFLELLINKGCYSPDVVLCTKLIKGFFNSRNVRKAVRVMEILESYG-KPDAFA 985
GK+D +L E L+ P ++ T LI+ + + +A+++++ + S G +PD F
Sbjct: 93 GKIDLALKVFEELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFT 152
Query: 984 YNALISGFCKVNQIGLATKVLDRMKRQFCPPDVVTYNILIGSLCSRGKLGLAMKMFGQLL 805
YN + G CK ++ A + + + + C PDV+TYNIL+ +L ++GK K ++
Sbjct: 153 YNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIF 212
Query: 804 EDKSCEPTVITYTILIEATIVEGGINEAMKLLNEMSLKGLCPDMYTYNAITRGLCKEGMV 625
+ CEP V+TY+ILI + +G I E++ L+ M KGL PD Y Y+ + C+EG +
Sbjct: 213 S-RGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKL 271
Query: 624 DEAIEFVKSLPSRGCEPDVISYNVLLRAVLNRGRWSEGERLIAEMISRGCEPNVVTYGIL 445
D AIEF+ + G PD+++YN ++ A+ G + ++ GC PNV +Y +
Sbjct: 272 DMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTM 331
Query: 444 INLFCHDGKVEDAIDVLKVMMEKGLTPDSYSYDPFISTFCKEGRLDLAIVFLDYMISNGC 265
++ G A+ ++ M+ KG+ PD +Y+ IS C++G +D AI L M+S
Sbjct: 332 LSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRF 391
Query: 264 APDIVNYNSILSALCKNGNAHQALEIFEKLGNTGCPPNVSSYNTMISGL 118
P+IV+Y ++L LCK A+E+ + GC PN ++Y +I G+
Sbjct: 392 QPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQPNETTYTLLIEGI 440
>ref|XP_006589209.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Glycine max]
Length = 561
Score = 529 bits (1363), Expect = e-147
Identities = 267/466 (57%), Positives = 338/466 (72%)
Frame = -3
Query: 1398 MAIFSTDFFSHSIPFNTTITKPSHQNLIINSLXXXXXXXXXXXXXPKLKISAETRPADFQ 1219
M ST+F SH++PF T + H N N++ K+ S++TRP Q
Sbjct: 1 MTTVSTEFLSHTLPFQTNLKHAWHPNPT-NTVITCSNRRLNNKGHTKVT-SSDTRP--HQ 56
Query: 1218 SLDFKDTHLLKLFHRSFKAGKLDESLYFLELLINKGCYSPDVVLCTKLIKGFFNSRNVRK 1039
DF+DT+ +K +R K GK E+LYFLE ++ G Y PDV+LCTKLIK F S+ K
Sbjct: 57 HYDFRDTNHIKSLNRLCKTGKCTEALYFLEQMVMNG-YKPDVILCTKLIKCLFTSKRTEK 115
Query: 1038 AVRVMEILESYGKPDAFAYNALISGFCKVNQIGLATKVLDRMKRQFCPPDVVTYNILIGS 859
AVRVMEILE YG+PD+FAYNA+ISGFC+ ++ A V+ RMK + PDVVTYNILIGS
Sbjct: 116 AVRVMEILEQYGEPDSFAYNAVISGFCRSDRFDAANGVILRMKNRGFSPDVVTYNILIGS 175
Query: 858 LCSRGKLGLAMKMFGQLLEDKSCEPTVITYTILIEATIVEGGINEAMKLLNEMSLKGLCP 679
LC+RG L LA+K+ QLLED +C PT+ITYTILIEATI+ GGI+EAM+LL+EM +GL P
Sbjct: 176 LCARGNLDLALKVMDQLLED-NCNPTLITYTILIEATIIHGGIDEAMRLLDEMMSRGLQP 234
Query: 678 DMYTYNAITRGLCKEGMVDEAIEFVKSLPSRGCEPDVISYNVLLRAVLNRGRWSEGERLI 499
D+YTYN I RG+CK G+VD A EFV +L P + YN+LL+ +LN GRW GERL+
Sbjct: 235 DIYTYNVIVRGMCKRGLVDRAFEFVSNL---SITPSLNLYNLLLKGLLNEGRWEAGERLM 291
Query: 498 AEMISRGCEPNVVTYGILINLFCHDGKVEDAIDVLKVMMEKGLTPDSYSYDPFISTFCKE 319
++MI +GCEPNVVTY +LI+ C DGK +A+DVL+VM E+GL PD+Y YDP IS FCKE
Sbjct: 292 SDMIVKGCEPNVVTYSVLISSLCRDGKAGEAVDVLRVMKERGLNPDAYCYDPLISAFCKE 351
Query: 318 GRLDLAIVFLDYMISNGCAPDIVNYNSILSALCKNGNAHQALEIFEKLGNTGCPPNVSSY 139
G++DLAI F+D MIS G PDIVNYN+I+ +LCK G A +AL IF+KL GCPPN SSY
Sbjct: 352 GKVDLAIGFVDDMISAGWLPDIVNYNTIMGSLCKKGRADEALNIFKKLEEVGCPPNASSY 411
Query: 138 NTMISGLWNGGNRIRALGMVLDMVNKGIDPDEITYNSLISCLCRDG 1
NTM LW+ G++IRALGM+L+M++ G+DPD ITYNSLIS LCRDG
Sbjct: 412 NTMFGALWSSGDKIRALGMILEMLSNGVDPDRITYNSLISSLCRDG 457