BLASTX nr result
ID: Sinomenium21_contig00029952
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00029952
(751 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007220282.1| hypothetical protein PRUPE_ppa000731mg [Prun... 92 1e-16
gb|EXC32919.1| Pumilio-4-like protein [Morus notabilis] 91 4e-16
ref|XP_002273503.1| PREDICTED: pumilio homolog 4 [Vitis vinifera... 86 1e-14
ref|XP_002530940.1| pumilio, putative [Ricinus communis] gi|2235... 85 3e-14
ref|XP_006436466.1| hypothetical protein CICLE_v10030594mg [Citr... 82 2e-13
ref|XP_003606712.1| Pumilio-like protein [Medicago truncatula] g... 82 2e-13
ref|XP_007132045.1| hypothetical protein PHAVU_011G062300g [Phas... 81 4e-13
ref|XP_002299859.2| pumilio/Puf RNA-binding domain-containing fa... 81 4e-13
ref|XP_004157558.1| PREDICTED: pumilio homolog 4-like [Cucumis s... 81 4e-13
ref|XP_004142495.1| PREDICTED: pumilio homolog 4-like [Cucumis s... 81 4e-13
ref|XP_007009914.1| Pumilio 4 isoform 3 [Theobroma cacao] gi|508... 80 8e-13
ref|XP_007009913.1| Pumilio 4 isoform 2 [Theobroma cacao] gi|508... 80 8e-13
ref|XP_007009912.1| Pumilio 4 isoform 1 [Theobroma cacao] gi|508... 80 8e-13
ref|XP_004160189.1| PREDICTED: LOW QUALITY PROTEIN: pumilio homo... 80 1e-12
ref|XP_004143128.1| PREDICTED: pumilio homolog 1-like [Cucumis s... 80 1e-12
ref|XP_006592185.1| PREDICTED: pumilio homolog 2-like isoform X2... 79 1e-12
ref|XP_007132044.1| hypothetical protein PHAVU_011G062200g [Phas... 79 1e-12
ref|XP_003539618.1| PREDICTED: pumilio homolog 2-like isoform X1... 79 1e-12
ref|XP_002314164.2| hypothetical protein POPTR_0009s03980g [Popu... 79 2e-12
ref|XP_002283191.1| PREDICTED: pumilio homolog 1-like [Vitis vin... 79 2e-12
>ref|XP_007220282.1| hypothetical protein PRUPE_ppa000731mg [Prunus persica]
gi|462416744|gb|EMJ21481.1| hypothetical protein
PRUPE_ppa000731mg [Prunus persica]
Length = 1021
Score = 92.4 bits (228), Expect = 1e-16
Identities = 50/76 (65%), Positives = 59/76 (77%)
Frame = +3
Query: 450 LGREIELMLREQQRKDIMEREKDLNIFRSGSAPPTVEGSLTAVGSLFQNSEDHFSGINRN 629
L E+EL+LREQ+ + + RE+DLNI+RSGSAPPTVEGSLTAVGSLF NS D +R
Sbjct: 28 LQSELELILREQRNQHAIHRERDLNIYRSGSAPPTVEGSLTAVGSLFGNS-DFRDVTSRI 86
Query: 630 WNANGVLSEEEIRRHP 677
N NGVLSE+EIR HP
Sbjct: 87 SNNNGVLSEDEIRSHP 102
>gb|EXC32919.1| Pumilio-4-like protein [Morus notabilis]
Length = 989
Score = 90.9 bits (224), Expect = 4e-16
Identities = 47/78 (60%), Positives = 58/78 (74%)
Frame = +3
Query: 447 NLGREIELMLREQQRKDIMEREKDLNIFRSGSAPPTVEGSLTAVGSLFQNSEDHFSGINR 626
+L EIE +LRE + + +M+RE+DLNI+RSGSAPPTVEGSL+AVGSLF NS+ N
Sbjct: 10 SLQTEIESILREHRNQSVMDRERDLNIYRSGSAPPTVEGSLSAVGSLFGNSDVKEINTNS 69
Query: 627 NWNANGVLSEEEIRRHPA 680
NG LSE+EIR HPA
Sbjct: 70 RGFNNGGLSEDEIRSHPA 87
>ref|XP_002273503.1| PREDICTED: pumilio homolog 4 [Vitis vinifera]
gi|296085990|emb|CBI31431.3| unnamed protein product
[Vitis vinifera]
Length = 1026
Score = 86.3 bits (212), Expect = 1e-14
Identities = 43/79 (54%), Positives = 61/79 (77%), Gaps = 1/79 (1%)
Frame = +3
Query: 447 NLGREIELMLREQQRKDIMEREKDLNIFRSGSAPPTVEGSLTAVGSLFQNSE-DHFSGIN 623
+L E++ MLREQ+ + +++R +DLNIFRSGSAPPTVEGSL+AVG LF+N++ + + +
Sbjct: 28 SLHDELQAMLREQRNRGLVDRGRDLNIFRSGSAPPTVEGSLSAVGGLFRNADVNEINHRS 87
Query: 624 RNWNANGVLSEEEIRRHPA 680
N NGVL+E+EI HPA
Sbjct: 88 SNKTTNGVLTEDEILSHPA 106
>ref|XP_002530940.1| pumilio, putative [Ricinus communis] gi|223529499|gb|EEF31455.1|
pumilio, putative [Ricinus communis]
Length = 1024
Score = 84.7 bits (208), Expect = 3e-14
Identities = 42/75 (56%), Positives = 59/75 (78%), Gaps = 1/75 (1%)
Frame = +3
Query: 459 EIELMLREQQRKDIMEREKDLNIFRSGSAPPTVEGSLTAVGSLFQNSE-DHFSGINRNWN 635
E+E++L+ Q+ + ++RE+DLNI+RSGSAPPTVEGSL+AVGSLF+N S I+ +
Sbjct: 31 ELEMILQAQRNQHYIDRERDLNIYRSGSAPPTVEGSLSAVGSLFRNPNFSDVSSISNSSR 90
Query: 636 ANGVLSEEEIRRHPA 680
+N VLS++EIR HPA
Sbjct: 91 SNTVLSDDEIRSHPA 105
>ref|XP_006436466.1| hypothetical protein CICLE_v10030594mg [Citrus clementina]
gi|567887890|ref|XP_006436467.1| hypothetical protein
CICLE_v10030594mg [Citrus clementina]
gi|568864458|ref|XP_006485615.1| PREDICTED: pumilio
homolog 4-like isoform X1 [Citrus sinensis]
gi|568864460|ref|XP_006485616.1| PREDICTED: pumilio
homolog 4-like isoform X2 [Citrus sinensis]
gi|568864462|ref|XP_006485617.1| PREDICTED: pumilio
homolog 4-like isoform X3 [Citrus sinensis]
gi|557538662|gb|ESR49706.1| hypothetical protein
CICLE_v10030594mg [Citrus clementina]
gi|557538663|gb|ESR49707.1| hypothetical protein
CICLE_v10030594mg [Citrus clementina]
Length = 1029
Score = 82.4 bits (202), Expect = 2e-13
Identities = 44/84 (52%), Positives = 56/84 (66%), Gaps = 6/84 (7%)
Frame = +3
Query: 447 NLGREIELMLREQQRKDIMEREKDLNIFRSGSAPPTVEGSLTAVGSLFQNS------EDH 608
+L E+EL+L+ Q + I+ RE+D+NI+RSGSAPPTVEGSL AVGSLF
Sbjct: 29 SLQTELELILQRQPDRQIVNRERDVNIYRSGSAPPTVEGSLNAVGSLFLRDNPGSICNTA 88
Query: 609 FSGINRNWNANGVLSEEEIRRHPA 680
G N + NG+LSE+EIR HPA
Sbjct: 89 AGGSGGNGDINGILSEDEIRSHPA 112
>ref|XP_003606712.1| Pumilio-like protein [Medicago truncatula]
gi|355507767|gb|AES88909.1| Pumilio-like protein
[Medicago truncatula]
Length = 1025
Score = 82.0 bits (201), Expect = 2e-13
Identities = 45/79 (56%), Positives = 57/79 (72%), Gaps = 2/79 (2%)
Frame = +3
Query: 450 LGREIELMLREQQRKDIMEREKDLNIFRSGSAPPTVEGSLTAVGSLF--QNSEDHFSGIN 623
L +EI ++LREQ+R++ +RE++LNIFRSGSAPPTVEGSL AVG LF FS
Sbjct: 22 LEKEIGMLLREQRRQEGDDRERELNIFRSGSAPPTVEGSLNAVGGLFGAGGVAGGFSDFP 81
Query: 624 RNWNANGVLSEEEIRRHPA 680
N + NGV+SEEE+R PA
Sbjct: 82 GNKDVNGVVSEEELRSDPA 100
>ref|XP_007132045.1| hypothetical protein PHAVU_011G062300g [Phaseolus vulgaris]
gi|561005045|gb|ESW04039.1| hypothetical protein
PHAVU_011G062300g [Phaseolus vulgaris]
Length = 1047
Score = 80.9 bits (198), Expect = 4e-13
Identities = 43/83 (51%), Positives = 57/83 (68%), Gaps = 6/83 (7%)
Frame = +3
Query: 450 LGREIELMLREQQRKDIMEREKDLNIFRSGSAPPTVEGSLTAVGSLF------QNSEDHF 611
L +EI ++LREQ+R++ +RE++LNIFRSGSAPPTVEGSL+AVG LF + F
Sbjct: 22 LEKEIGMLLREQRRQEADDRERELNIFRSGSAPPTVEGSLSAVGGLFGGGGGAAGASGAF 81
Query: 612 SGINRNWNANGVLSEEEIRRHPA 680
S + NG+ SEEE+R PA
Sbjct: 82 SEFQGTKDVNGIASEEELRSDPA 104
>ref|XP_002299859.2| pumilio/Puf RNA-binding domain-containing family protein [Populus
trichocarpa] gi|550348126|gb|EEE84664.2| pumilio/Puf
RNA-binding domain-containing family protein [Populus
trichocarpa]
Length = 1065
Score = 80.9 bits (198), Expect = 4e-13
Identities = 44/81 (54%), Positives = 56/81 (69%), Gaps = 3/81 (3%)
Frame = +3
Query: 447 NLGREIELMLREQQRKDIMEREKDLNIFRSGSAPPTVEGSLTAVGSLF---QNSEDHFSG 617
+L +EI L+LREQ+R++ +REK+LN++RSGSAPPTVEGSL AVG LF N FS
Sbjct: 21 DLEKEIGLLLREQRRQEADDREKELNLYRSGSAPPTVEGSLNAVGGLFGGGGNGGASFSD 80
Query: 618 INRNWNANGVLSEEEIRRHPA 680
N NG SE+E+R PA
Sbjct: 81 FIGGKNGNGFTSEKELRSDPA 101
>ref|XP_004157558.1| PREDICTED: pumilio homolog 4-like [Cucumis sativus]
Length = 997
Score = 80.9 bits (198), Expect = 4e-13
Identities = 44/78 (56%), Positives = 55/78 (70%), Gaps = 1/78 (1%)
Frame = +3
Query: 447 NLGREIELMLREQQRKDIMEREKDLNIFRSGSAPPTVEGSLTAVGSLFQNSEDHFSGINR 626
NL E+EL+LRE + R DLNI+RSGSAPPTVEGS+ AVGSLF +S +++ N
Sbjct: 27 NLRTELELLLRENSNHSVAGRGGDLNIYRSGSAPPTVEGSINAVGSLFTSS--YYNEFNT 84
Query: 627 NWNAN-GVLSEEEIRRHP 677
+N GVLSE+EIR HP
Sbjct: 85 KSGSNDGVLSEDEIRSHP 102
>ref|XP_004142495.1| PREDICTED: pumilio homolog 4-like [Cucumis sativus]
Length = 996
Score = 80.9 bits (198), Expect = 4e-13
Identities = 44/78 (56%), Positives = 55/78 (70%), Gaps = 1/78 (1%)
Frame = +3
Query: 447 NLGREIELMLREQQRKDIMEREKDLNIFRSGSAPPTVEGSLTAVGSLFQNSEDHFSGINR 626
NL E+EL+LRE + R DLNI+RSGSAPPTVEGS+ AVGSLF +S +++ N
Sbjct: 27 NLRTELELLLRENSNHSVAGRGGDLNIYRSGSAPPTVEGSINAVGSLFTSS--YYNEFNT 84
Query: 627 NWNAN-GVLSEEEIRRHP 677
+N GVLSE+EIR HP
Sbjct: 85 KSGSNDGVLSEDEIRSHP 102
>ref|XP_007009914.1| Pumilio 4 isoform 3 [Theobroma cacao] gi|508726827|gb|EOY18724.1|
Pumilio 4 isoform 3 [Theobroma cacao]
Length = 767
Score = 80.1 bits (196), Expect = 8e-13
Identities = 44/82 (53%), Positives = 58/82 (70%), Gaps = 8/82 (9%)
Frame = +3
Query: 459 EIELMLREQQRKDIMEREKDLNIFRSGSAPPTVEGSLTAVGSLFQNSEDHFSGIN----- 623
E+EL+L+ + + + RE+DLNI+RSGSAPPTVEGSL+AVGSLF N + F IN
Sbjct: 22 ELELILQAHRNQQFVGRERDLNIYRSGSAPPTVEGSLSAVGSLFANPD--FGDINGITAV 79
Query: 624 ---RNWNANGVLSEEEIRRHPA 680
+ + NG+LSE+EIR HPA
Sbjct: 80 AGSSSSSNNGMLSEDEIRSHPA 101
>ref|XP_007009913.1| Pumilio 4 isoform 2 [Theobroma cacao] gi|508726826|gb|EOY18723.1|
Pumilio 4 isoform 2 [Theobroma cacao]
Length = 907
Score = 80.1 bits (196), Expect = 8e-13
Identities = 44/82 (53%), Positives = 58/82 (70%), Gaps = 8/82 (9%)
Frame = +3
Query: 459 EIELMLREQQRKDIMEREKDLNIFRSGSAPPTVEGSLTAVGSLFQNSEDHFSGIN----- 623
E+EL+L+ + + + RE+DLNI+RSGSAPPTVEGSL+AVGSLF N + F IN
Sbjct: 22 ELELILQAHRNQQFVGRERDLNIYRSGSAPPTVEGSLSAVGSLFANPD--FGDINGITAV 79
Query: 624 ---RNWNANGVLSEEEIRRHPA 680
+ + NG+LSE+EIR HPA
Sbjct: 80 AGSSSSSNNGMLSEDEIRSHPA 101
>ref|XP_007009912.1| Pumilio 4 isoform 1 [Theobroma cacao] gi|508726825|gb|EOY18722.1|
Pumilio 4 isoform 1 [Theobroma cacao]
Length = 1026
Score = 80.1 bits (196), Expect = 8e-13
Identities = 44/82 (53%), Positives = 58/82 (70%), Gaps = 8/82 (9%)
Frame = +3
Query: 459 EIELMLREQQRKDIMEREKDLNIFRSGSAPPTVEGSLTAVGSLFQNSEDHFSGIN----- 623
E+EL+L+ + + + RE+DLNI+RSGSAPPTVEGSL+AVGSLF N + F IN
Sbjct: 22 ELELILQAHRNQQFVGRERDLNIYRSGSAPPTVEGSLSAVGSLFANPD--FGDINGITAV 79
Query: 624 ---RNWNANGVLSEEEIRRHPA 680
+ + NG+LSE+EIR HPA
Sbjct: 80 AGSSSSSNNGMLSEDEIRSHPA 101
>ref|XP_004160189.1| PREDICTED: LOW QUALITY PROTEIN: pumilio homolog 1-like [Cucumis
sativus]
Length = 1043
Score = 79.7 bits (195), Expect = 1e-12
Identities = 42/80 (52%), Positives = 58/80 (72%), Gaps = 3/80 (3%)
Frame = +3
Query: 450 LGREIELMLREQQRKDIMEREKDLNIFRSGSAPPTVEGSLTAVGSL---FQNSEDHFSGI 620
L EI L+LREQ+R++ +RE++LN++RSGSAPPTVEGSL+AVG L S + F+ I
Sbjct: 13 LETEIGLLLREQRRQEADDRERELNLYRSGSAPPTVEGSLSAVGGLVGGIAGSANAFAEI 72
Query: 621 NRNWNANGVLSEEEIRRHPA 680
+ N NG +SEE++R PA
Sbjct: 73 TGSKNGNGFVSEEQLRSDPA 92
>ref|XP_004143128.1| PREDICTED: pumilio homolog 1-like [Cucumis sativus]
Length = 1043
Score = 79.7 bits (195), Expect = 1e-12
Identities = 42/80 (52%), Positives = 58/80 (72%), Gaps = 3/80 (3%)
Frame = +3
Query: 450 LGREIELMLREQQRKDIMEREKDLNIFRSGSAPPTVEGSLTAVGSL---FQNSEDHFSGI 620
L EI L+LREQ+R++ +RE++LN++RSGSAPPTVEGSL+AVG L S + F+ I
Sbjct: 13 LETEIGLLLREQRRQEADDRERELNLYRSGSAPPTVEGSLSAVGGLVGGIAGSANAFAEI 72
Query: 621 NRNWNANGVLSEEEIRRHPA 680
+ N NG +SEE++R PA
Sbjct: 73 TGSKNGNGFVSEEQLRSDPA 92
>ref|XP_006592185.1| PREDICTED: pumilio homolog 2-like isoform X2 [Glycine max]
Length = 902
Score = 79.3 bits (194), Expect = 1e-12
Identities = 42/82 (51%), Positives = 57/82 (69%), Gaps = 5/82 (6%)
Frame = +3
Query: 450 LGREIELMLREQQRKDIMEREKDLNIFRSGSAPPTVEGSLTAVGSLFQ-----NSEDHFS 614
L +EI ++LREQ+R++ +RE++LNIFRSGSAPPTV+GSL+AVG LF + FS
Sbjct: 22 LEKEIGMLLREQRRQEADDRERELNIFRSGSAPPTVDGSLSAVGGLFAGGGGGGAPAAFS 81
Query: 615 GINRNWNANGVLSEEEIRRHPA 680
+ NG+ SEEE+R PA
Sbjct: 82 EFRGTKDVNGIASEEELRSDPA 103
>ref|XP_007132044.1| hypothetical protein PHAVU_011G062200g [Phaseolus vulgaris]
gi|561005044|gb|ESW04038.1| hypothetical protein
PHAVU_011G062200g [Phaseolus vulgaris]
Length = 1050
Score = 79.3 bits (194), Expect = 1e-12
Identities = 43/86 (50%), Positives = 57/86 (66%), Gaps = 9/86 (10%)
Frame = +3
Query: 450 LGREIELMLREQQRKDIMEREKDLNIFRSGSAPPTVEGSLTAVGSLF---------QNSE 602
L +EI ++LREQ+R++ +RE++LNIFRSGSAPPTVEGSL+AVG LF
Sbjct: 22 LEKEIGMLLREQRRQEADDRERELNIFRSGSAPPTVEGSLSAVGGLFGGGAVAGAGGGDA 81
Query: 603 DHFSGINRNWNANGVLSEEEIRRHPA 680
FS + + NG+ SEEE+R PA
Sbjct: 82 GAFSEFHGTTDVNGIASEEELRSDPA 107
>ref|XP_003539618.1| PREDICTED: pumilio homolog 2-like isoform X1 [Glycine max]
Length = 1033
Score = 79.3 bits (194), Expect = 1e-12
Identities = 42/82 (51%), Positives = 57/82 (69%), Gaps = 5/82 (6%)
Frame = +3
Query: 450 LGREIELMLREQQRKDIMEREKDLNIFRSGSAPPTVEGSLTAVGSLFQ-----NSEDHFS 614
L +EI ++LREQ+R++ +RE++LNIFRSGSAPPTV+GSL+AVG LF + FS
Sbjct: 22 LEKEIGMLLREQRRQEADDRERELNIFRSGSAPPTVDGSLSAVGGLFAGGGGGGAPAAFS 81
Query: 615 GINRNWNANGVLSEEEIRRHPA 680
+ NG+ SEEE+R PA
Sbjct: 82 EFRGTKDVNGIASEEELRSDPA 103
>ref|XP_002314164.2| hypothetical protein POPTR_0009s03980g [Populus trichocarpa]
gi|550330981|gb|EEE88119.2| hypothetical protein
POPTR_0009s03980g [Populus trichocarpa]
Length = 1009
Score = 79.0 bits (193), Expect = 2e-12
Identities = 41/81 (50%), Positives = 57/81 (70%), Gaps = 3/81 (3%)
Frame = +3
Query: 447 NLGREIELMLREQQRKDIMEREKDLNIFRSGSAPPTVEGSLTAVGSLF---QNSEDHFSG 617
+L +E+ L+LREQ+R++ +REK+LN++RSGSAPPTVEGSL AVG LF + FS
Sbjct: 21 DLEKELGLLLREQRRQEADDREKELNLYRSGSAPPTVEGSLNAVGGLFGGGGHGGASFSD 80
Query: 618 INRNWNANGVLSEEEIRRHPA 680
N NG ++E+E+R PA
Sbjct: 81 FASGKNGNGFITEKELRSDPA 101
>ref|XP_002283191.1| PREDICTED: pumilio homolog 1-like [Vitis vinifera]
Length = 1065
Score = 79.0 bits (193), Expect = 2e-12
Identities = 41/78 (52%), Positives = 55/78 (70%)
Frame = +3
Query: 447 NLGREIELMLREQQRKDIMEREKDLNIFRSGSAPPTVEGSLTAVGSLFQNSEDHFSGINR 626
+L ++I L+LREQ+R++ + EK+LN++RSGSAPPTVEGS+ AVG LF F G
Sbjct: 21 DLEKDIGLLLREQRRQEADDYEKELNLYRSGSAPPTVEGSMNAVGGLFGGGA-AFPGFPD 79
Query: 627 NWNANGVLSEEEIRRHPA 680
+ N NG SEEE+R PA
Sbjct: 80 DGNGNGFASEEELRSDPA 97