BLASTX nr result
ID: Sinomenium21_contig00029927
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00029927
(378 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI19104.3| unnamed protein product [Vitis vinifera] 84 3e-14
ref|XP_002284293.1| PREDICTED: pentatricopeptide repeat-containi... 84 3e-14
ref|XP_004301943.1| PREDICTED: pentatricopeptide repeat-containi... 83 5e-14
ref|XP_004138810.1| PREDICTED: pentatricopeptide repeat-containi... 82 8e-14
ref|XP_002513855.1| pentatricopeptide repeat-containing protein,... 82 1e-13
gb|EYU39753.1| hypothetical protein MIMGU_mgv1a022363mg, partial... 81 1e-13
ref|XP_002307403.1| pentatricopeptide repeat-containing family p... 80 3e-13
ref|XP_007018892.1| Pentatricopeptide repeat (PPR) superfamily p... 80 4e-13
ref|XP_006283342.1| hypothetical protein CARUB_v10004383mg [Caps... 80 4e-13
emb|CAA16732.1| putative protein [Arabidopsis thaliana] gi|72686... 80 4e-13
ref|XP_002867987.1| binding protein [Arabidopsis lyrata subsp. l... 80 4e-13
ref|NP_193587.4| pentatricopeptide repeat-containing protein [Ar... 80 4e-13
ref|XP_006472673.1| PREDICTED: pentatricopeptide repeat-containi... 79 7e-13
gb|EXC06699.1| hypothetical protein L484_021537 [Morus notabilis] 79 9e-13
ref|XP_006414092.1| hypothetical protein EUTSA_v10024756mg [Eutr... 79 9e-13
ref|XP_006348275.1| PREDICTED: pentatricopeptide repeat-containi... 78 1e-12
ref|XP_004244369.1| PREDICTED: pentatricopeptide repeat-containi... 78 1e-12
ref|XP_006434069.1| hypothetical protein CICLE_v10003712mg [Citr... 77 2e-12
ref|XP_007222036.1| hypothetical protein PRUPE_ppa003044mg [Prun... 76 4e-12
ref|XP_004505335.1| PREDICTED: pentatricopeptide repeat-containi... 75 1e-11
>emb|CBI19104.3| unnamed protein product [Vitis vinifera]
Length = 457
Score = 83.6 bits (205), Expect = 3e-14
Identities = 39/47 (82%), Positives = 41/47 (87%)
Frame = -1
Query: 378 SWKAMIVAYARNGYCQEALKLMYRMQAEGINVDDYLQSTVLGACGDV 238
SWKAMIV YARNG C EALKLMYRMQAEGI VDDY+ +TVL ACGDV
Sbjct: 396 SWKAMIVGYARNGLCGEALKLMYRMQAEGIEVDDYILTTVLSACGDV 442
>ref|XP_002284293.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g18520-like [Vitis vinifera]
Length = 595
Score = 83.6 bits (205), Expect = 3e-14
Identities = 39/47 (82%), Positives = 41/47 (87%)
Frame = -1
Query: 378 SWKAMIVAYARNGYCQEALKLMYRMQAEGINVDDYLQSTVLGACGDV 238
SWKAMIV YARNG C EALKLMYRMQAEGI VDDY+ +TVL ACGDV
Sbjct: 534 SWKAMIVGYARNGLCGEALKLMYRMQAEGIEVDDYILTTVLSACGDV 580
>ref|XP_004301943.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g18520-like [Fragaria vesca subsp. vesca]
Length = 583
Score = 82.8 bits (203), Expect = 5e-14
Identities = 37/47 (78%), Positives = 42/47 (89%)
Frame = -1
Query: 378 SWKAMIVAYARNGYCQEALKLMYRMQAEGINVDDYLQSTVLGACGDV 238
SWKAMIV YARNG+CQEALKLMYRMQAEG +DDY+ +TVL ACGD+
Sbjct: 518 SWKAMIVGYARNGHCQEALKLMYRMQAEGFELDDYIVATVLTACGDL 564
>ref|XP_004138810.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g18520-like [Cucumis sativus]
gi|449490224|ref|XP_004158542.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g18520-like [Cucumis sativus]
Length = 619
Score = 82.0 bits (201), Expect = 8e-14
Identities = 37/47 (78%), Positives = 40/47 (85%)
Frame = -1
Query: 378 SWKAMIVAYARNGYCQEALKLMYRMQAEGINVDDYLQSTVLGACGDV 238
SWKAMI+ YARNG C+EALKLMYRMQAEG VDDY+ TV GACGDV
Sbjct: 558 SWKAMILCYARNGLCREALKLMYRMQAEGFEVDDYILGTVYGACGDV 604
>ref|XP_002513855.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223546941|gb|EEF48438.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 498
Score = 81.6 bits (200), Expect = 1e-13
Identities = 35/47 (74%), Positives = 43/47 (91%)
Frame = -1
Query: 378 SWKAMIVAYARNGYCQEALKLMYRMQAEGINVDDYLQSTVLGACGDV 238
SWK MI++YARNG C+EALKLMYRMQAEGI VDDY+ ++V+G+CGDV
Sbjct: 437 SWKTMILSYARNGLCREALKLMYRMQAEGIEVDDYIYASVMGSCGDV 483
>gb|EYU39753.1| hypothetical protein MIMGU_mgv1a022363mg, partial [Mimulus
guttatus]
Length = 475
Score = 81.3 bits (199), Expect = 1e-13
Identities = 38/46 (82%), Positives = 41/46 (89%)
Frame = -1
Query: 378 SWKAMIVAYARNGYCQEALKLMYRMQAEGINVDDYLQSTVLGACGD 241
SWKAMIVAYA+NG C EALKL+YRMQAEGI VDDY+ STVL ACGD
Sbjct: 391 SWKAMIVAYAKNGQCGEALKLVYRMQAEGIGVDDYILSTVLTACGD 436
>ref|XP_002307403.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222856852|gb|EEE94399.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 472
Score = 80.1 bits (196), Expect = 3e-13
Identities = 34/47 (72%), Positives = 41/47 (87%)
Frame = -1
Query: 378 SWKAMIVAYARNGYCQEALKLMYRMQAEGINVDDYLQSTVLGACGDV 238
+W+AMI+ Y RNG CQEALKLMYRMQAEGI VDDY+ + VLGACG++
Sbjct: 411 TWRAMIMGYVRNGLCQEALKLMYRMQAEGIQVDDYISAKVLGACGEI 457
>ref|XP_007018892.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
[Theobroma cacao] gi|508724220|gb|EOY16117.1|
Pentatricopeptide repeat (PPR) superfamily protein,
putative [Theobroma cacao]
Length = 620
Score = 79.7 bits (195), Expect = 4e-13
Identities = 34/47 (72%), Positives = 41/47 (87%)
Frame = -1
Query: 378 SWKAMIVAYARNGYCQEALKLMYRMQAEGINVDDYLQSTVLGACGDV 238
SWKAMI+ YARNG C+EAL+LMYRM+AEG VDDY+ +TVL ACGD+
Sbjct: 560 SWKAMIIGYARNGLCREALQLMYRMEAEGFEVDDYILTTVLSACGDI 606
>ref|XP_006283342.1| hypothetical protein CARUB_v10004383mg [Capsella rubella]
gi|482552047|gb|EOA16240.1| hypothetical protein
CARUB_v10004383mg [Capsella rubella]
Length = 621
Score = 79.7 bits (195), Expect = 4e-13
Identities = 33/47 (70%), Positives = 41/47 (87%)
Frame = -1
Query: 378 SWKAMIVAYARNGYCQEALKLMYRMQAEGINVDDYLQSTVLGACGDV 238
SWKAMI+ YARNG+C+EALKLMYRM+AEG VDDY+ +T+L CGD+
Sbjct: 559 SWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTCGDI 605
>emb|CAA16732.1| putative protein [Arabidopsis thaliana] gi|7268645|emb|CAB78854.1|
putative protein [Arabidopsis thaliana]
Length = 565
Score = 79.7 bits (195), Expect = 4e-13
Identities = 33/47 (70%), Positives = 41/47 (87%)
Frame = -1
Query: 378 SWKAMIVAYARNGYCQEALKLMYRMQAEGINVDDYLQSTVLGACGDV 238
SWKAMI+ YARNG+C+EALKLMYRM+AEG VDDY+ +T+L CGD+
Sbjct: 502 SWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTCGDI 548
>ref|XP_002867987.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297313823|gb|EFH44246.1| binding protein [Arabidopsis
lyrata subsp. lyrata]
Length = 616
Score = 79.7 bits (195), Expect = 4e-13
Identities = 33/47 (70%), Positives = 41/47 (87%)
Frame = -1
Query: 378 SWKAMIVAYARNGYCQEALKLMYRMQAEGINVDDYLQSTVLGACGDV 238
SWKAMI+ YARNG+C+EALKLMYRM+AEG VDDY+ +T+L CGD+
Sbjct: 554 SWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTCGDI 600
>ref|NP_193587.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122236144|sp|Q0WNP3.1|PP319_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At4g18520 gi|110738662|dbj|BAF01256.1| hypothetical
protein [Arabidopsis thaliana]
gi|332658657|gb|AEE84057.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 617
Score = 79.7 bits (195), Expect = 4e-13
Identities = 33/47 (70%), Positives = 41/47 (87%)
Frame = -1
Query: 378 SWKAMIVAYARNGYCQEALKLMYRMQAEGINVDDYLQSTVLGACGDV 238
SWKAMI+ YARNG+C+EALKLMYRM+AEG VDDY+ +T+L CGD+
Sbjct: 554 SWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTCGDI 600
>ref|XP_006472673.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g18520-like [Citrus sinensis]
Length = 620
Score = 79.0 bits (193), Expect = 7e-13
Identities = 35/47 (74%), Positives = 39/47 (82%)
Frame = -1
Query: 378 SWKAMIVAYARNGYCQEALKLMYRMQAEGINVDDYLQSTVLGACGDV 238
+WK+MIV YARNG CQEALKLMYRMQAEG VDDY+ TV ACGD+
Sbjct: 559 TWKSMIVGYARNGLCQEALKLMYRMQAEGFEVDDYILITVYNACGDI 605
>gb|EXC06699.1| hypothetical protein L484_021537 [Morus notabilis]
Length = 616
Score = 78.6 bits (192), Expect = 9e-13
Identities = 34/47 (72%), Positives = 41/47 (87%)
Frame = -1
Query: 378 SWKAMIVAYARNGYCQEALKLMYRMQAEGINVDDYLQSTVLGACGDV 238
+WK+MIV YARNG C+EAL+LMYRMQAEG VDDY+ +TVL ACGD+
Sbjct: 555 AWKSMIVGYARNGLCREALRLMYRMQAEGFQVDDYILTTVLTACGDI 601
>ref|XP_006414092.1| hypothetical protein EUTSA_v10024756mg [Eutrema salsugineum]
gi|557115262|gb|ESQ55545.1| hypothetical protein
EUTSA_v10024756mg [Eutrema salsugineum]
Length = 585
Score = 78.6 bits (192), Expect = 9e-13
Identities = 32/47 (68%), Positives = 41/47 (87%)
Frame = -1
Query: 378 SWKAMIVAYARNGYCQEALKLMYRMQAEGINVDDYLQSTVLGACGDV 238
+WKAMI+ YARNG+C+EALKLMYRM+AEG VDDY+ +T+L CGD+
Sbjct: 523 AWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTCGDI 569
>ref|XP_006348275.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g18520-like [Solanum tuberosum]
Length = 621
Score = 78.2 bits (191), Expect = 1e-12
Identities = 36/46 (78%), Positives = 40/46 (86%)
Frame = -1
Query: 378 SWKAMIVAYARNGYCQEALKLMYRMQAEGINVDDYLQSTVLGACGD 241
SWKAMIVAYA+NG C EALKLMYRMQ EGI VDDY+ +TVL ACG+
Sbjct: 556 SWKAMIVAYAKNGSCGEALKLMYRMQVEGIEVDDYILATVLTACGE 601
>ref|XP_004244369.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g18520-like [Solanum lycopersicum]
Length = 617
Score = 78.2 bits (191), Expect = 1e-12
Identities = 36/46 (78%), Positives = 40/46 (86%)
Frame = -1
Query: 378 SWKAMIVAYARNGYCQEALKLMYRMQAEGINVDDYLQSTVLGACGD 241
SWKAMIVAYA+NG C EALKLMYRMQ EGI VDDY+ +TVL ACG+
Sbjct: 552 SWKAMIVAYAKNGNCGEALKLMYRMQVEGIEVDDYILATVLTACGE 597
>ref|XP_006434069.1| hypothetical protein CICLE_v10003712mg [Citrus clementina]
gi|557536191|gb|ESR47309.1| hypothetical protein
CICLE_v10003712mg [Citrus clementina]
Length = 438
Score = 77.4 bits (189), Expect = 2e-12
Identities = 34/47 (72%), Positives = 38/47 (80%)
Frame = -1
Query: 378 SWKAMIVAYARNGYCQEALKLMYRMQAEGINVDDYLQSTVLGACGDV 238
+WK+M V YARNG CQEALKLMYRMQAEG VDDY+ TV ACGD+
Sbjct: 377 TWKSMTVGYARNGLCQEALKLMYRMQAEGFEVDDYILMTVYNACGDI 423
>ref|XP_007222036.1| hypothetical protein PRUPE_ppa003044mg [Prunus persica]
gi|462418972|gb|EMJ23235.1| hypothetical protein
PRUPE_ppa003044mg [Prunus persica]
Length = 609
Score = 76.3 bits (186), Expect = 4e-12
Identities = 33/47 (70%), Positives = 40/47 (85%)
Frame = -1
Query: 378 SWKAMIVAYARNGYCQEALKLMYRMQAEGINVDDYLQSTVLGACGDV 238
SWKAMIV YA+NG CQEA+KLMYRM+ EG VDDY+ +TVL ACG++
Sbjct: 548 SWKAMIVGYAKNGLCQEAMKLMYRMRTEGFEVDDYILATVLTACGEL 594
>ref|XP_004505335.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g18520-like [Cicer arietinum]
Length = 787
Score = 75.1 bits (183), Expect = 1e-11
Identities = 33/47 (70%), Positives = 41/47 (87%)
Frame = -1
Query: 378 SWKAMIVAYARNGYCQEALKLMYRMQAEGINVDDYLQSTVLGACGDV 238
SWKAMI+ YARNG+C++ALKLMYRM+AEG VDDY+ +TVL ACG +
Sbjct: 722 SWKAMILGYARNGHCRKALKLMYRMRAEGFVVDDYILATVLTACGGI 768