BLASTX nr result
ID: Sinomenium21_contig00029877
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00029877
(417 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002274648.1| PREDICTED: KH domain-containing protein At5g... 94 3e-17
ref|XP_006346087.1| PREDICTED: KH domain-containing protein At5g... 86 7e-15
ref|XP_006346086.1| PREDICTED: KH domain-containing protein At5g... 86 7e-15
ref|XP_004244007.1| PREDICTED: KH domain-containing protein At5g... 86 7e-15
ref|XP_004244006.1| PREDICTED: KH domain-containing protein At5g... 86 7e-15
ref|XP_002532938.1| nucleic acid binding protein, putative [Rici... 79 5e-13
gb|ACG35732.1| nucleic acid binding protein [Zea mays] 79 5e-13
ref|NP_001141163.1| uncharacterized protein LOC100273249 [Zea ma... 79 7e-13
dbj|BAJ88160.1| predicted protein [Hordeum vulgare subsp. vulgare] 78 1e-12
gb|EAY87341.1| hypothetical protein OsI_08744 [Oryza sativa Indi... 77 2e-12
ref|XP_004953739.1| PREDICTED: KH domain-containing protein At5g... 77 2e-12
gb|AFW63660.1| hypothetical protein ZEAMMB73_233372 [Zea mays] 77 2e-12
ref|XP_002454368.1| hypothetical protein SORBIDRAFT_04g029520 [S... 77 2e-12
gb|ACN35020.1| unknown [Zea mays] gi|413923729|gb|AFW63661.1| hy... 77 2e-12
ref|XP_006857601.1| hypothetical protein AMTR_s00061p00100880 [A... 77 3e-12
gb|AFW63662.1| hypothetical protein ZEAMMB73_233372, partial [Ze... 74 2e-11
gb|EYU27503.1| hypothetical protein MIMGU_mgv1a011068mg [Mimulus... 73 5e-11
gb|EMT02598.1| hypothetical protein F775_43967 [Aegilops tauschii] 73 5e-11
ref|XP_006647814.1| PREDICTED: KH domain-containing protein At5g... 72 6e-11
ref|XP_007020328.1| RNA-binding KH domain-containing protein [Th... 72 1e-10
>ref|XP_002274648.1| PREDICTED: KH domain-containing protein At5g56140 isoform 1 [Vitis
vinifera] gi|296089986|emb|CBI39805.3| unnamed protein
product [Vitis vinifera]
Length = 287
Score = 93.6 bits (231), Expect = 3e-17
Identities = 50/68 (73%), Positives = 52/68 (76%)
Frame = -2
Query: 206 MSSGRYMAYXXXXXXXXXXXXXSGMRSATSALVEQEKYLSELLAERQKLSPFMPVLLHCY 27
MSSGRYMAY +G+RSATSALVEQEKYLSELLAER KLSPFMPVL H Y
Sbjct: 1 MSSGRYMAYSPSPSTAPHSPHIAGLRSATSALVEQEKYLSELLAERHKLSPFMPVLPHSY 60
Query: 26 RLLNQEIL 3
RLLNQEIL
Sbjct: 61 RLLNQEIL 68
>ref|XP_006346087.1| PREDICTED: KH domain-containing protein At5g56140-like isoform X2
[Solanum tuberosum]
Length = 289
Score = 85.5 bits (210), Expect = 7e-15
Identities = 45/68 (66%), Positives = 50/68 (73%)
Frame = -2
Query: 206 MSSGRYMAYXXXXXXXXXXXXXSGMRSATSALVEQEKYLSELLAERQKLSPFMPVLLHCY 27
MSSGRYMAY G+RSA+SA+ EQEKYLSELLAER KL PF+PVL HCY
Sbjct: 1 MSSGRYMAYSPSPSAPQSPHIA-GLRSASSAIAEQEKYLSELLAERHKLGPFVPVLPHCY 59
Query: 26 RLLNQEIL 3
RLLNQE+L
Sbjct: 60 RLLNQELL 67
>ref|XP_006346086.1| PREDICTED: KH domain-containing protein At5g56140-like isoform X1
[Solanum tuberosum]
Length = 293
Score = 85.5 bits (210), Expect = 7e-15
Identities = 45/68 (66%), Positives = 50/68 (73%)
Frame = -2
Query: 206 MSSGRYMAYXXXXXXXXXXXXXSGMRSATSALVEQEKYLSELLAERQKLSPFMPVLLHCY 27
MSSGRYMAY G+RSA+SA+ EQEKYLSELLAER KL PF+PVL HCY
Sbjct: 1 MSSGRYMAYSPSPSAPQSPHIA-GLRSASSAIAEQEKYLSELLAERHKLGPFVPVLPHCY 59
Query: 26 RLLNQEIL 3
RLLNQE+L
Sbjct: 60 RLLNQELL 67
>ref|XP_004244007.1| PREDICTED: KH domain-containing protein At5g56140-like isoform 2
[Solanum lycopersicum]
Length = 295
Score = 85.5 bits (210), Expect = 7e-15
Identities = 45/68 (66%), Positives = 50/68 (73%)
Frame = -2
Query: 206 MSSGRYMAYXXXXXXXXXXXXXSGMRSATSALVEQEKYLSELLAERQKLSPFMPVLLHCY 27
MSSGRYMAY G+RSA+SA+ EQEKYLSELLAER KL PF+PVL HCY
Sbjct: 1 MSSGRYMAYSPSPSAPQSPHIA-GLRSASSAIAEQEKYLSELLAERHKLGPFVPVLPHCY 59
Query: 26 RLLNQEIL 3
RLLNQE+L
Sbjct: 60 RLLNQELL 67
>ref|XP_004244006.1| PREDICTED: KH domain-containing protein At5g56140-like isoform 1
[Solanum lycopersicum]
Length = 299
Score = 85.5 bits (210), Expect = 7e-15
Identities = 45/68 (66%), Positives = 50/68 (73%)
Frame = -2
Query: 206 MSSGRYMAYXXXXXXXXXXXXXSGMRSATSALVEQEKYLSELLAERQKLSPFMPVLLHCY 27
MSSGRYMAY G+RSA+SA+ EQEKYLSELLAER KL PF+PVL HCY
Sbjct: 1 MSSGRYMAYSPSPSAPQSPHIA-GLRSASSAIAEQEKYLSELLAERHKLGPFVPVLPHCY 59
Query: 26 RLLNQEIL 3
RLLNQE+L
Sbjct: 60 RLLNQELL 67
>ref|XP_002532938.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223527289|gb|EEF29442.1| nucleic acid binding
protein, putative [Ricinus communis]
Length = 300
Score = 79.3 bits (194), Expect = 5e-13
Identities = 44/65 (67%), Positives = 48/65 (73%)
Frame = -2
Query: 197 GRYMAYXXXXXXXXXXXXXSGMRSATSALVEQEKYLSELLAERQKLSPFMPVLLHCYRLL 18
GR+MAY G+RSA+SALVEQEKYLSELLAER KLSPFMPVL H YRLL
Sbjct: 15 GRFMAYSPSPSAPHSPHLS-GLRSASSALVEQEKYLSELLAERHKLSPFMPVLPHTYRLL 73
Query: 17 NQEIL 3
+QEIL
Sbjct: 74 SQEIL 78
>gb|ACG35732.1| nucleic acid binding protein [Zea mays]
Length = 286
Score = 79.3 bits (194), Expect = 5e-13
Identities = 40/68 (58%), Positives = 49/68 (72%)
Frame = -2
Query: 206 MSSGRYMAYXXXXXXXXXXXXXSGMRSATSALVEQEKYLSELLAERQKLSPFMPVLLHCY 27
MSSGRYMAY +G+R+ ++A+ EQEKYL+ELLAERQKL PF+PV+ H
Sbjct: 1 MSSGRYMAYSPSPSTTPHSPRIAGLRAPSAAMAEQEKYLAELLAERQKLGPFVPVIPHSV 60
Query: 26 RLLNQEIL 3
RLLNQEIL
Sbjct: 61 RLLNQEIL 68
>ref|NP_001141163.1| uncharacterized protein LOC100273249 [Zea mays]
gi|194703026|gb|ACF85597.1| unknown [Zea mays]
gi|413938647|gb|AFW73198.1| nucleic acid binding protein
[Zea mays]
Length = 286
Score = 79.0 bits (193), Expect = 7e-13
Identities = 40/68 (58%), Positives = 49/68 (72%)
Frame = -2
Query: 206 MSSGRYMAYXXXXXXXXXXXXXSGMRSATSALVEQEKYLSELLAERQKLSPFMPVLLHCY 27
MSSGRYMAY +G+R+ ++A+ EQEKYL+ELLAERQKL PF+PV+ H
Sbjct: 1 MSSGRYMAYSPSPSTTPHSPRIAGLRAPSAAVAEQEKYLAELLAERQKLGPFVPVIPHSV 60
Query: 26 RLLNQEIL 3
RLLNQEIL
Sbjct: 61 RLLNQEIL 68
>dbj|BAJ88160.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 287
Score = 77.8 bits (190), Expect = 1e-12
Identities = 40/68 (58%), Positives = 50/68 (73%)
Frame = -2
Query: 206 MSSGRYMAYXXXXXXXXXXXXXSGMRSATSALVEQEKYLSELLAERQKLSPFMPVLLHCY 27
MSSGRYMAY SG+R++++A+ +QEKYL+ELLAER KL+PF+PVL H
Sbjct: 1 MSSGRYMAYSPSPSTTPHSPRISGLRASSAAVADQEKYLAELLAERHKLNPFVPVLPHSI 60
Query: 26 RLLNQEIL 3
RLLNQEIL
Sbjct: 61 RLLNQEIL 68
>gb|EAY87341.1| hypothetical protein OsI_08744 [Oryza sativa Indica Group]
gi|215769394|dbj|BAH01623.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 286
Score = 77.4 bits (189), Expect = 2e-12
Identities = 40/68 (58%), Positives = 49/68 (72%)
Frame = -2
Query: 206 MSSGRYMAYXXXXXXXXXXXXXSGMRSATSALVEQEKYLSELLAERQKLSPFMPVLLHCY 27
M+SGRYMAY G+R+A+SA+ +QEKYL+ELLAER KLSPF+PVL +
Sbjct: 1 MASGRYMAYSPSPSTTPHSPRIPGLRAASSAVADQEKYLAELLAERHKLSPFIPVLPNSV 60
Query: 26 RLLNQEIL 3
RLLNQEIL
Sbjct: 61 RLLNQEIL 68
>ref|XP_004953739.1| PREDICTED: KH domain-containing protein At5g56140-like [Setaria
italica]
Length = 286
Score = 77.0 bits (188), Expect = 2e-12
Identities = 39/68 (57%), Positives = 48/68 (70%)
Frame = -2
Query: 206 MSSGRYMAYXXXXXXXXXXXXXSGMRSATSALVEQEKYLSELLAERQKLSPFMPVLLHCY 27
MSSGRYMAY +G+R+ ++A+ EQEKYL+ELLAER KL PF+PV+ H
Sbjct: 1 MSSGRYMAYSPSPSTTPHSPRIAGLRAPSAAVAEQEKYLAELLAERHKLGPFIPVIPHSV 60
Query: 26 RLLNQEIL 3
RLLNQEIL
Sbjct: 61 RLLNQEIL 68
>gb|AFW63660.1| hypothetical protein ZEAMMB73_233372 [Zea mays]
Length = 197
Score = 77.0 bits (188), Expect = 2e-12
Identities = 39/67 (58%), Positives = 47/67 (70%)
Frame = -2
Query: 206 MSSGRYMAYXXXXXXXXXXXXXSGMRSATSALVEQEKYLSELLAERQKLSPFMPVLLHCY 27
MSSGRYMAY G+R+ ++A+ EQEKYLSELLAER KL+PF+PV+ H
Sbjct: 1 MSSGRYMAYSPSPSTTPHSPRIHGLRTPSAAVAEQEKYLSELLAERHKLTPFIPVIPHSV 60
Query: 26 RLLNQEI 6
RLLNQEI
Sbjct: 61 RLLNQEI 67
>ref|XP_002454368.1| hypothetical protein SORBIDRAFT_04g029520 [Sorghum bicolor]
gi|241934199|gb|EES07344.1| hypothetical protein
SORBIDRAFT_04g029520 [Sorghum bicolor]
Length = 286
Score = 77.0 bits (188), Expect = 2e-12
Identities = 39/68 (57%), Positives = 47/68 (69%)
Frame = -2
Query: 206 MSSGRYMAYXXXXXXXXXXXXXSGMRSATSALVEQEKYLSELLAERQKLSPFMPVLLHCY 27
MSSGRYMAY G+R+ ++A+ EQEKYL+ELLAER KL PF+PV+ H
Sbjct: 1 MSSGRYMAYSPSPSTTPHSPRIGGLRTPSAAVAEQEKYLAELLAERHKLGPFIPVIPHSV 60
Query: 26 RLLNQEIL 3
RLLNQEIL
Sbjct: 61 RLLNQEIL 68
>gb|ACN35020.1| unknown [Zea mays] gi|413923729|gb|AFW63661.1| hypothetical protein
ZEAMMB73_233372 [Zea mays]
Length = 286
Score = 77.0 bits (188), Expect = 2e-12
Identities = 39/67 (58%), Positives = 47/67 (70%)
Frame = -2
Query: 206 MSSGRYMAYXXXXXXXXXXXXXSGMRSATSALVEQEKYLSELLAERQKLSPFMPVLLHCY 27
MSSGRYMAY G+R+ ++A+ EQEKYLSELLAER KL+PF+PV+ H
Sbjct: 1 MSSGRYMAYSPSPSTTPHSPRIHGLRTPSAAVAEQEKYLSELLAERHKLTPFIPVIPHSV 60
Query: 26 RLLNQEI 6
RLLNQEI
Sbjct: 61 RLLNQEI 67
>ref|XP_006857601.1| hypothetical protein AMTR_s00061p00100880 [Amborella trichopoda]
gi|548861697|gb|ERN19068.1| hypothetical protein
AMTR_s00061p00100880 [Amborella trichopoda]
Length = 286
Score = 76.6 bits (187), Expect = 3e-12
Identities = 43/68 (63%), Positives = 47/68 (69%)
Frame = -2
Query: 206 MSSGRYMAYXXXXXXXXXXXXXSGMRSATSALVEQEKYLSELLAERQKLSPFMPVLLHCY 27
MSSGRYMAY RSA +ALVEQ+KYLSELLAERQKL PFM VL H Y
Sbjct: 1 MSSGRYMAYSPSPSTAPHSP----FRSAATALVEQDKYLSELLAERQKLGPFMQVLPHSY 56
Query: 26 RLLNQEIL 3
R+LNQEI+
Sbjct: 57 RVLNQEIV 64
>gb|AFW63662.1| hypothetical protein ZEAMMB73_233372, partial [Zea mays]
Length = 179
Score = 73.9 bits (180), Expect = 2e-11
Identities = 37/66 (56%), Positives = 46/66 (69%)
Frame = -2
Query: 209 NMSSGRYMAYXXXXXXXXXXXXXSGMRSATSALVEQEKYLSELLAERQKLSPFMPVLLHC 30
+MSSGRYMAY G+R+ ++A+ EQEKYLSELLAER KL+PF+PV+ H
Sbjct: 103 DMSSGRYMAYSPSPSTTPHSPRIHGLRTPSAAVAEQEKYLSELLAERHKLTPFIPVIPHS 162
Query: 29 YRLLNQ 12
RLLNQ
Sbjct: 163 VRLLNQ 168
>gb|EYU27503.1| hypothetical protein MIMGU_mgv1a011068mg [Mimulus guttatus]
Length = 293
Score = 72.8 bits (177), Expect = 5e-11
Identities = 42/71 (59%), Positives = 45/71 (63%), Gaps = 3/71 (4%)
Frame = -2
Query: 206 MSSGRYMAYXXXXXXXXXXXXXS---GMRSATSALVEQEKYLSELLAERQKLSPFMPVLL 36
MSSGRYMAY G A SALVEQEKYL+ELLAER L PFM VL
Sbjct: 1 MSSGRYMAYSPSPSAPHSPHIGVSAAGSLRAASALVEQEKYLAELLAERNSLGPFMTVLP 60
Query: 35 HCYRLLNQEIL 3
+CYRLLNQEI+
Sbjct: 61 NCYRLLNQEIV 71
>gb|EMT02598.1| hypothetical protein F775_43967 [Aegilops tauschii]
Length = 197
Score = 72.8 bits (177), Expect = 5e-11
Identities = 37/65 (56%), Positives = 47/65 (72%)
Frame = -2
Query: 206 MSSGRYMAYXXXXXXXXXXXXXSGMRSATSALVEQEKYLSELLAERQKLSPFMPVLLHCY 27
MSSGRYMAY SG+R++++A+ +QEKYL+ELLAER KL+PF+PVL H
Sbjct: 1 MSSGRYMAYSPSPSTTPHSPRISGLRASSAAVADQEKYLAELLAERHKLNPFVPVLPHSI 60
Query: 26 RLLNQ 12
RLLNQ
Sbjct: 61 RLLNQ 65
>ref|XP_006647814.1| PREDICTED: KH domain-containing protein At5g56140-like [Oryza
brachyantha]
Length = 285
Score = 72.4 bits (176), Expect = 6e-11
Identities = 41/68 (60%), Positives = 49/68 (72%)
Frame = -2
Query: 206 MSSGRYMAYXXXXXXXXXXXXXSGMRSATSALVEQEKYLSELLAERQKLSPFMPVLLHCY 27
M+SGRYMAY SG+R A+SA+ +QEKYLS+LLAER KLSPF+PVL +
Sbjct: 1 MASGRYMAYSPSPSTTPHSPRISGLR-ASSAVADQEKYLSDLLAERHKLSPFIPVLPNSV 59
Query: 26 RLLNQEIL 3
RLLNQEIL
Sbjct: 60 RLLNQEIL 67
>ref|XP_007020328.1| RNA-binding KH domain-containing protein [Theobroma cacao]
gi|508719956|gb|EOY11853.1| RNA-binding KH
domain-containing protein [Theobroma cacao]
Length = 312
Score = 71.6 bits (174), Expect = 1e-10
Identities = 42/70 (60%), Positives = 47/70 (67%), Gaps = 5/70 (7%)
Frame = -2
Query: 197 GRYMAYXXXXXXXXXXXXXSGMRSA-----TSALVEQEKYLSELLAERQKLSPFMPVLLH 33
GRYMAY G+RSA ++A ++QEKYLSELLAER KLSPFMPVL H
Sbjct: 9 GRYMAYSPSPSAPHSPHLS-GLRSAAAAASSAAFLDQEKYLSELLAERHKLSPFMPVLPH 67
Query: 32 CYRLLNQEIL 3
YRLLNQEIL
Sbjct: 68 TYRLLNQEIL 77