BLASTX nr result
ID: Sinomenium21_contig00029845
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00029845
(434 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002267181.1| PREDICTED: DNA polymerase epsilon subunit 2-... 45 6e-08
emb|CBI15355.3| unnamed protein product [Vitis vinifera] 45 6e-08
ref|XP_004973646.1| PREDICTED: DNA polymerase epsilon subunit 2-... 45 5e-07
dbj|BAD10772.1| DNA polymerase epsilon subunit B-like protein [O... 43 6e-07
gb|EEE68835.1| hypothetical protein OsJ_27613 [Oryza sativa Japo... 43 6e-07
ref|XP_006659486.1| PREDICTED: DNA polymerase epsilon subunit 2-... 44 8e-07
ref|XP_006849523.1| hypothetical protein AMTR_s00024p00151000 [A... 46 8e-07
ref|NP_001147081.1| DNA polymerase epsilon subunit 2 [Zea mays] ... 45 4e-06
ref|XP_003574603.1| PREDICTED: DNA polymerase epsilon subunit 2-... 41 8e-06
ref|XP_002444485.1| hypothetical protein SORBIDRAFT_07g022680 [S... 45 8e-06
>ref|XP_002267181.1| PREDICTED: DNA polymerase epsilon subunit 2-like [Vitis vinifera]
Length = 527
Score = 44.7 bits (104), Expect(2) = 6e-08
Identities = 19/26 (73%), Positives = 23/26 (88%)
Frame = +2
Query: 209 SALEKKAVNDMFVILSDIWVGNEEVI 286
+ LEKKAVNDMFVILSD+W+ NEE +
Sbjct: 274 AGLEKKAVNDMFVILSDVWLDNEETM 299
Score = 37.7 bits (86), Expect(2) = 6e-08
Identities = 18/24 (75%), Positives = 20/24 (83%)
Frame = +1
Query: 16 DESLAVLVGLDFFGGGSLLVEETV 87
DESLA L GLDFFGGG+L EET+
Sbjct: 248 DESLASLSGLDFFGGGTLTREETL 271
>emb|CBI15355.3| unnamed protein product [Vitis vinifera]
Length = 527
Score = 44.7 bits (104), Expect(2) = 6e-08
Identities = 19/26 (73%), Positives = 23/26 (88%)
Frame = +2
Query: 209 SALEKKAVNDMFVILSDIWVGNEEVI 286
+ LEKKAVNDMFVILSD+W+ NEE +
Sbjct: 274 AGLEKKAVNDMFVILSDVWLDNEETM 299
Score = 37.7 bits (86), Expect(2) = 6e-08
Identities = 18/24 (75%), Positives = 20/24 (83%)
Frame = +1
Query: 16 DESLAVLVGLDFFGGGSLLVEETV 87
DESLA L GLDFFGGG+L EET+
Sbjct: 248 DESLASLSGLDFFGGGTLTREETL 271
>ref|XP_004973646.1| PREDICTED: DNA polymerase epsilon subunit 2-like [Setaria italica]
Length = 533
Score = 45.4 bits (106), Expect(2) = 5e-07
Identities = 19/29 (65%), Positives = 25/29 (86%)
Frame = +2
Query: 209 SALEKKAVNDMFVILSDIWVGNEEVIQCL 295
S+LEKKA+NDMFVILSD+W+ N E ++ L
Sbjct: 278 SSLEKKAINDMFVILSDVWIDNPETMEKL 306
Score = 33.9 bits (76), Expect(2) = 5e-07
Identities = 17/30 (56%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Frame = +1
Query: 1 PPWRTDE-SLAVLVGLDFFGGGSLLVEETV 87
PP E SL++L+GLDFFGGG + EET+
Sbjct: 246 PPLEDREASLSLLMGLDFFGGGVIPTEETL 275
>dbj|BAD10772.1| DNA polymerase epsilon subunit B-like protein [Oryza sativa
Japonica Group]
Length = 303
Score = 43.1 bits (100), Expect(2) = 6e-07
Identities = 18/35 (51%), Positives = 27/35 (77%)
Frame = +2
Query: 209 SALEKKAVNDMFVILSDIWVGNEEVIQCLFDTSYV 313
S LEKKA+NDMFVILSD+W+ + E++ + S++
Sbjct: 199 STLEKKAMNDMFVILSDVWLDSSELVATITHQSHL 233
Score = 35.8 bits (81), Expect(2) = 6e-07
Identities = 18/30 (60%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Frame = +1
Query: 1 PPWRTDE-SLAVLVGLDFFGGGSLLVEETV 87
PP E SL++L+GLDFFGGG + EETV
Sbjct: 167 PPLEDREASLSMLMGLDFFGGGVIAAEETV 196
>gb|EEE68835.1| hypothetical protein OsJ_27613 [Oryza sativa Japonica Group]
Length = 236
Score = 43.1 bits (100), Expect(2) = 6e-07
Identities = 18/35 (51%), Positives = 27/35 (77%)
Frame = +2
Query: 209 SALEKKAVNDMFVILSDIWVGNEEVIQCLFDTSYV 313
S LEKKA+NDMFVILSD+W+ + E++ + S++
Sbjct: 128 STLEKKAMNDMFVILSDVWLDSSELVATITHQSHL 162
Score = 35.8 bits (81), Expect(2) = 6e-07
Identities = 18/30 (60%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Frame = +1
Query: 1 PPWRTDE-SLAVLVGLDFFGGGSLLVEETV 87
PP E SL++L+GLDFFGGG + EETV
Sbjct: 96 PPLEDREASLSMLMGLDFFGGGVIAAEETV 125
>ref|XP_006659486.1| PREDICTED: DNA polymerase epsilon subunit 2-like [Oryza
brachyantha]
Length = 533
Score = 43.9 bits (102), Expect(2) = 8e-07
Identities = 19/29 (65%), Positives = 24/29 (82%)
Frame = +2
Query: 209 SALEKKAVNDMFVILSDIWVGNEEVIQCL 295
S LEKKA+NDMFVILSD+W+ N E ++ L
Sbjct: 278 STLEKKAMNDMFVILSDVWLDNSETMEKL 306
Score = 34.7 bits (78), Expect(2) = 8e-07
Identities = 18/30 (60%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Frame = +1
Query: 1 PPWRTDE-SLAVLVGLDFFGGGSLLVEETV 87
PP E SL+ L+GLDFFGGG + EETV
Sbjct: 246 PPLEDREASLSTLMGLDFFGGGVIPTEETV 275
>ref|XP_006849523.1| hypothetical protein AMTR_s00024p00151000 [Amborella trichopoda]
gi|548853098|gb|ERN11104.1| hypothetical protein
AMTR_s00024p00151000 [Amborella trichopoda]
Length = 492
Score = 45.8 bits (107), Expect(2) = 8e-07
Identities = 21/32 (65%), Positives = 26/32 (81%)
Frame = +2
Query: 200 AQTSALEKKAVNDMFVILSDIWVGNEEVIQCL 295
A+ LEKKAVNDMFVILSD+W+ NEE ++ L
Sbjct: 201 ARLVELEKKAVNDMFVILSDVWLDNEETMEKL 232
Score = 32.7 bits (73), Expect(2) = 8e-07
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = +1
Query: 22 SLAVLVGLDFFGGGSLLVEETVAFIRL 102
SLAV GLDFFG G L EET + L
Sbjct: 180 SLAVHTGLDFFGAGYLTPEETARLVEL 206
>ref|NP_001147081.1| DNA polymerase epsilon subunit 2 [Zea mays]
gi|195607112|gb|ACG25386.1| DNA polymerase epsilon
subunit 2 [Zea mays] gi|414869832|tpg|DAA48389.1| TPA:
DNA polymerase epsilon subunit 2 [Zea mays]
Length = 533
Score = 45.1 bits (105), Expect(2) = 4e-06
Identities = 20/29 (68%), Positives = 25/29 (86%)
Frame = +2
Query: 209 SALEKKAVNDMFVILSDIWVGNEEVIQCL 295
S+LEKKAVNDMFVILSD+W+ N E ++ L
Sbjct: 278 SSLEKKAVNDMFVILSDVWLDNPETMEKL 306
Score = 31.2 bits (69), Expect(2) = 4e-06
Identities = 15/30 (50%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Frame = +1
Query: 1 PPWRTDE-SLAVLVGLDFFGGGSLLVEETV 87
PP E S+++L+G DFFGGG + EET+
Sbjct: 246 PPLEDREASVSLLMGFDFFGGGVIPTEETL 275
>ref|XP_003574603.1| PREDICTED: DNA polymerase epsilon subunit 2-like [Brachypodium
distachyon]
Length = 533
Score = 41.2 bits (95), Expect(2) = 8e-06
Identities = 18/29 (62%), Positives = 24/29 (82%)
Frame = +2
Query: 209 SALEKKAVNDMFVILSDIWVGNEEVIQCL 295
S+LE KAVNDMFVILSD+W+ + E ++ L
Sbjct: 278 SSLENKAVNDMFVILSDVWLDSAETMEKL 306
Score = 33.9 bits (76), Expect(2) = 8e-06
Identities = 17/30 (56%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Frame = +1
Query: 1 PPWRTDE-SLAVLVGLDFFGGGSLLVEETV 87
PP E SL++L+GLDFFGGG + EET+
Sbjct: 246 PPLEDREASLSLLMGLDFFGGGVIPTEETL 275
>ref|XP_002444485.1| hypothetical protein SORBIDRAFT_07g022680 [Sorghum bicolor]
gi|241940835|gb|EES13980.1| hypothetical protein
SORBIDRAFT_07g022680 [Sorghum bicolor]
Length = 431
Score = 45.1 bits (105), Expect(2) = 8e-06
Identities = 20/29 (68%), Positives = 25/29 (86%)
Frame = +2
Query: 209 SALEKKAVNDMFVILSDIWVGNEEVIQCL 295
S+LEKKAVNDMFVILSD+W+ N E ++ L
Sbjct: 278 SSLEKKAVNDMFVILSDVWLDNPETMEKL 306
Score = 30.0 bits (66), Expect(2) = 8e-06
Identities = 15/30 (50%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Frame = +1
Query: 1 PPWRTDE-SLAVLVGLDFFGGGSLLVEETV 87
PP E S+++L+GLDFFGGG + EE +
Sbjct: 246 PPLEDREASVSLLMGLDFFGGGVIPSEEAL 275