BLASTX nr result
ID: Sinomenium21_contig00029633
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00029633
(319 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_005090486.1| ribosomal protein S4 (mitochondrion) [Lotus ... 167 2e-39
dbj|BAD83538.2| ribosomal protein S4, partial (mitochondrion) [N... 167 2e-39
ref|YP_003587235.1| ribosomal protein S4 [Citrullus lanatus] gi|... 166 2e-39
gb|AHC94278.1| ribosomal protein S4, partial (mitochondrion) [Am... 165 7e-39
gb|AHA47128.1| ribosomal protein S4 (mitochondrion) [Amborella t... 165 7e-39
ref|YP_005090450.1| ribosomal protein S4 (mitochondrion) [Millet... 164 9e-39
ref|YP_003587372.1| ribosomal protein S4 [Cucurbita pepo] gi|259... 163 3e-38
ref|YP_717175.1| ribosomal protein S4 [Brassica napus] gi|375911... 159 4e-37
ref|YP_004222288.1| ribosomal protein S4 [Beta vulgaris subsp. m... 158 6e-37
ref|NP_064046.2| rps4 gene product (mitochondrion) [Beta vulgari... 158 6e-37
gb|AAW47270.1| ribosomal protein S4 [Calycanthus floridus] 157 1e-36
gb|ACH78250.1| ribosomal protein S4 [Arabidopsis thaliana] 157 1e-36
ref|YP_002000578.1| ribosomal protein S4 [Oryza sativa Japonica ... 157 1e-36
gb|AAW47276.1| ribosomal protein S4 [Platanus occidentalis] 157 2e-36
ref|YP_004237282.1| ribosomal protein S4 (mitochondrion) [Ricinu... 156 2e-36
gb|AGK25085.1| ribosomal protein S4, partial (mitochondrion) [Ma... 155 5e-36
ref|YP_007905731.1| ribosomal protein S4 (mitochondrion) [Liriod... 155 5e-36
gb|AAW47273.1| ribosomal protein S4 [Liriodendron tulipifera] 155 5e-36
gb|AAW47278.1| ribosomal protein S4 [Lonicera sp. Bergthorsson 0... 155 5e-36
gb|AAM18533.1|AF375592_1 ribosomal protein S4 [Magnolia x soulan... 155 5e-36
>ref|YP_005090486.1| ribosomal protein S4 (mitochondrion) [Lotus japonicus]
gi|357197350|gb|AET62946.1| ribosomal protein S4
(mitochondrion) [Lotus japonicus]
Length = 358
Score = 167 bits (422), Expect = 2e-39
Identities = 84/89 (94%), Positives = 85/89 (95%)
Frame = -1
Query: 268 ENLNSYIQLQTTRKLSLFYGDLPITEMHRRTERTSYIPFLLNLETRLDVILVRLHFRDTI 89
ENLNSYIQLQTTRKLSLFYGDLPITEMHR TERTSYIPFLLNLETRLDVILVRLHF +TI
Sbjct: 56 ENLNSYIQLQTTRKLSLFYGDLPITEMHRGTERTSYIPFLLNLETRLDVILVRLHFCETI 115
Query: 88 PQARQLISHRRVCVNNGMVSITHLKVSHG 2
PQARQLISHRRVCVNN MVSIT LKVSHG
Sbjct: 116 PQARQLISHRRVCVNNRMVSITRLKVSHG 144
>dbj|BAD83538.2| ribosomal protein S4, partial (mitochondrion) [Nicotiana tabacum]
Length = 349
Score = 167 bits (422), Expect = 2e-39
Identities = 82/89 (92%), Positives = 85/89 (95%)
Frame = -1
Query: 268 ENLNSYIQLQTTRKLSLFYGDLPITEMHRRTERTSYIPFLLNLETRLDVILVRLHFRDTI 89
ENLNSYIQLQTTRKLSLFYGDLPITEMHR ERTSYIPFLLNLETRLDVILVRLHF +TI
Sbjct: 51 ENLNSYIQLQTTRKLSLFYGDLPITEMHRGRERTSYIPFLLNLETRLDVILVRLHFCETI 110
Query: 88 PQARQLISHRRVCVNNGMVSITHLKVSHG 2
PQARQLISHRRVCVNNGMV+ITH K+SHG
Sbjct: 111 PQARQLISHRRVCVNNGMVNITHFKLSHG 139
>ref|YP_003587235.1| ribosomal protein S4 [Citrullus lanatus]
gi|259156791|gb|ACV96653.1| ribosomal protein S4
[Citrullus lanatus]
Length = 355
Score = 166 bits (421), Expect = 2e-39
Identities = 83/89 (93%), Positives = 84/89 (94%)
Frame = -1
Query: 268 ENLNSYIQLQTTRKLSLFYGDLPITEMHRRTERTSYIPFLLNLETRLDVILVRLHFRDTI 89
ENLNSYIQLQTTRKLSL YGDLPITEMHR TERTSYIPFLLNLETRLDVILVRLHF +TI
Sbjct: 54 ENLNSYIQLQTTRKLSLNYGDLPITEMHRGTERTSYIPFLLNLETRLDVILVRLHFSETI 113
Query: 88 PQARQLISHRRVCVNNGMVSITHLKVSHG 2
PQARQLISHRRVCVN GMVSITH KVSHG
Sbjct: 114 PQARQLISHRRVCVNKGMVSITHFKVSHG 142
>gb|AHC94278.1| ribosomal protein S4, partial (mitochondrion) [Amborella
trichopoda]
Length = 324
Score = 165 bits (417), Expect = 7e-39
Identities = 81/89 (91%), Positives = 86/89 (96%)
Frame = -1
Query: 268 ENLNSYIQLQTTRKLSLFYGDLPITEMHRRTERTSYIPFLLNLETRLDVILVRLHFRDTI 89
+NLNSYI+LQTTRKLSLFYGDLPITEMHR TERTSYIPFLLNLETRLDVILVRLHF +T+
Sbjct: 47 KNLNSYIKLQTTRKLSLFYGDLPITEMHRGTERTSYIPFLLNLETRLDVILVRLHFCETL 106
Query: 88 PQARQLISHRRVCVNNGMVSITHLKVSHG 2
PQARQLISHRR+CVNNGMVSIT LKVSHG
Sbjct: 107 PQARQLISHRRLCVNNGMVSITRLKVSHG 135
>gb|AHA47128.1| ribosomal protein S4 (mitochondrion) [Amborella trichopoda]
Length = 354
Score = 165 bits (417), Expect = 7e-39
Identities = 81/89 (91%), Positives = 86/89 (96%)
Frame = -1
Query: 268 ENLNSYIQLQTTRKLSLFYGDLPITEMHRRTERTSYIPFLLNLETRLDVILVRLHFRDTI 89
+NLNSYI+LQTTRKLSLFYGDLPITEMHR TERTSYIPFLLNLETRLDVILVRLHF +T+
Sbjct: 47 KNLNSYIKLQTTRKLSLFYGDLPITEMHRGTERTSYIPFLLNLETRLDVILVRLHFCETL 106
Query: 88 PQARQLISHRRVCVNNGMVSITHLKVSHG 2
PQARQLISHRR+CVNNGMVSIT LKVSHG
Sbjct: 107 PQARQLISHRRLCVNNGMVSITRLKVSHG 135
>ref|YP_005090450.1| ribosomal protein S4 (mitochondrion) [Millettia pinnata]
gi|372450274|ref|YP_005090457.1| ribosomal protein S4
(mitochondrion) [Millettia pinnata]
gi|357197313|gb|AET62910.1| ribosomal protein S4
(mitochondrion) [Millettia pinnata]
gi|357197320|gb|AET62917.1| ribosomal protein S4
(mitochondrion) [Millettia pinnata]
Length = 358
Score = 164 bits (416), Expect = 9e-39
Identities = 82/89 (92%), Positives = 85/89 (95%)
Frame = -1
Query: 268 ENLNSYIQLQTTRKLSLFYGDLPITEMHRRTERTSYIPFLLNLETRLDVILVRLHFRDTI 89
+N+NSYIQLQTTRKLSLFYGDLPITEMHR TERTSYIPFLLNLETRLDVILVRLHF +TI
Sbjct: 56 KNMNSYIQLQTTRKLSLFYGDLPITEMHRGTERTSYIPFLLNLETRLDVILVRLHFCETI 115
Query: 88 PQARQLISHRRVCVNNGMVSITHLKVSHG 2
PQARQLISHRRVCVNN MVSIT LKVSHG
Sbjct: 116 PQARQLISHRRVCVNNRMVSITRLKVSHG 144
>ref|YP_003587372.1| ribosomal protein S4 [Cucurbita pepo] gi|259156835|gb|ACV96696.1|
ribosomal protein S4 [Cucurbita pepo]
Length = 356
Score = 163 bits (412), Expect = 3e-38
Identities = 80/89 (89%), Positives = 82/89 (92%)
Frame = -1
Query: 268 ENLNSYIQLQTTRKLSLFYGDLPITEMHRRTERTSYIPFLLNLETRLDVILVRLHFRDTI 89
ENLNSYIQLQTTRKLSLFYGDLPITEMHR ERT+YIPFLLNLETRLDVILVRLHF T+
Sbjct: 54 ENLNSYIQLQTTRKLSLFYGDLPITEMHRGRERTNYIPFLLNLETRLDVILVRLHFSSTL 113
Query: 88 PQARQLISHRRVCVNNGMVSITHLKVSHG 2
PQARQLISHRRVCVN GMV ITH KVSHG
Sbjct: 114 PQARQLISHRRVCVNKGMVPITHFKVSHG 142
>ref|YP_717175.1| ribosomal protein S4 [Brassica napus] gi|37591124|dbj|BAC98926.1|
ribosomal protein S4 [Brassica napus]
Length = 362
Score = 159 bits (402), Expect = 4e-37
Identities = 78/87 (89%), Positives = 82/87 (94%)
Frame = -1
Query: 262 LNSYIQLQTTRKLSLFYGDLPITEMHRRTERTSYIPFLLNLETRLDVILVRLHFRDTIPQ 83
L SYIQLQTTRKLSLFYGDLPITEMHR T+RTSYIPFLLNLETR DVIL+RLHF +TIPQ
Sbjct: 63 LTSYIQLQTTRKLSLFYGDLPITEMHRGTKRTSYIPFLLNLETRFDVILLRLHFLETIPQ 122
Query: 82 ARQLISHRRVCVNNGMVSITHLKVSHG 2
ARQLISHRRVCVN GMVSITHLK+SHG
Sbjct: 123 ARQLISHRRVCVNKGMVSITHLKLSHG 149
>ref|YP_004222288.1| ribosomal protein S4 [Beta vulgaris subsp. maritima]
gi|317905723|emb|CBJ14108.1| ribosomal protein S4 [Beta
vulgaris subsp. maritima] gi|319439803|emb|CBJ17515.1|
ribosomal protein S4 [Beta vulgaris subsp. maritima]
Length = 315
Score = 158 bits (400), Expect = 6e-37
Identities = 76/89 (85%), Positives = 86/89 (96%)
Frame = -1
Query: 268 ENLNSYIQLQTTRKLSLFYGDLPITEMHRRTERTSYIPFLLNLETRLDVILVRLHFRDTI 89
+N NSYIQL+TTRKLSLFYG+LPIT+MHRRT+RTSYIPFLLNLETRLDVILVRLHF +TI
Sbjct: 47 KNRNSYIQLRTTRKLSLFYGNLPITKMHRRTKRTSYIPFLLNLETRLDVILVRLHFCETI 106
Query: 88 PQARQLISHRRVCVNNGMVSITHLKVSHG 2
PQARQLISHR+VCVNNG+V+I+H KVSHG
Sbjct: 107 PQARQLISHRKVCVNNGIVNISHFKVSHG 135
>ref|NP_064046.2| rps4 gene product (mitochondrion) [Beta vulgaris subsp. vulgaris]
gi|346683270|ref|YP_004842202.1| ribosomal protein S4
[Beta macrocarpa] gi|87248052|gb|ABD36080.1| ribosomal
protein S4 [Beta vulgaris subsp. vulgaris]
gi|148491424|dbj|BAA99356.2| ribosomal protein S4 [Beta
vulgaris subsp. vulgaris] gi|320148708|emb|CBJ23346.1|
ribosomal protein S4 [Beta vulgaris subsp. maritima]
gi|345500188|emb|CBX25007.1| ribosomal protein S4 [Beta
macrocarpa] gi|384939188|emb|CBL52035.1| ribosoma
lprotein S4 (mitochondrion) [Beta vulgaris subsp.
maritima]
Length = 315
Score = 158 bits (400), Expect = 6e-37
Identities = 76/89 (85%), Positives = 86/89 (96%)
Frame = -1
Query: 268 ENLNSYIQLQTTRKLSLFYGDLPITEMHRRTERTSYIPFLLNLETRLDVILVRLHFRDTI 89
+N NSYIQL+TTRKLSLFYG+LPIT+MHRRT+RTSYIPFLLNLETRLDVILVRLHF +TI
Sbjct: 47 KNRNSYIQLRTTRKLSLFYGNLPITKMHRRTKRTSYIPFLLNLETRLDVILVRLHFCETI 106
Query: 88 PQARQLISHRRVCVNNGMVSITHLKVSHG 2
PQARQLISHR+VCVNNG+V+I+H KVSHG
Sbjct: 107 PQARQLISHRKVCVNNGIVNISHFKVSHG 135
>gb|AAW47270.1| ribosomal protein S4 [Calycanthus floridus]
Length = 319
Score = 157 bits (398), Expect = 1e-36
Identities = 79/89 (88%), Positives = 82/89 (92%)
Frame = -1
Query: 268 ENLNSYIQLQTTRKLSLFYGDLPITEMHRRTERTSYIPFLLNLETRLDVILVRLHFRDTI 89
ENLNSYI+LQTTRKL LF+GDLPITEMHR TERTSYIPF LN ETR DVI VRLHFR+TI
Sbjct: 44 ENLNSYIKLQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETRSDVIPVRLHFRETI 103
Query: 88 PQARQLISHRRVCVNNGMVSITHLKVSHG 2
PQARQ ISHRRVCVNNGMVSITHLKVSHG
Sbjct: 104 PQARQPISHRRVCVNNGMVSITHLKVSHG 132
>gb|ACH78250.1| ribosomal protein S4 [Arabidopsis thaliana]
Length = 362
Score = 157 bits (398), Expect = 1e-36
Identities = 77/87 (88%), Positives = 81/87 (93%)
Frame = -1
Query: 262 LNSYIQLQTTRKLSLFYGDLPITEMHRRTERTSYIPFLLNLETRLDVILVRLHFRDTIPQ 83
L SYIQLQTTRKLSLFYGDLPITEMHR T+RTSYIPFLLNLETR DVIL+RLHF +TIPQ
Sbjct: 63 LTSYIQLQTTRKLSLFYGDLPITEMHRGTKRTSYIPFLLNLETRFDVILLRLHFLETIPQ 122
Query: 82 ARQLISHRRVCVNNGMVSITHLKVSHG 2
ARQLISHRRVCVN GMVSITH K+SHG
Sbjct: 123 ARQLISHRRVCVNKGMVSITHFKLSHG 149
>ref|YP_002000578.1| ribosomal protein S4 [Oryza sativa Japonica Group]
gi|92700092|dbj|BAC19883.2| Ribosomal protein S4 [Oryza
sativa Japonica Group]
Length = 352
Score = 157 bits (397), Expect = 1e-36
Identities = 77/89 (86%), Positives = 83/89 (93%)
Frame = -1
Query: 268 ENLNSYIQLQTTRKLSLFYGDLPITEMHRRTERTSYIPFLLNLETRLDVILVRLHFRDTI 89
ENLNS I+LQTTRKLSL+YGDLPI EMHR ERTSYIPFLLN ETRLDVILVRLHF DT+
Sbjct: 47 ENLNSNIKLQTTRKLSLYYGDLPIREMHRGRERTSYIPFLLNQETRLDVILVRLHFCDTL 106
Query: 88 PQARQLISHRRVCVNNGMVSITHLKVSHG 2
PQARQLISHRRVC+NNG+V+ITHLKVSHG
Sbjct: 107 PQARQLISHRRVCLNNGLVTITHLKVSHG 135
>gb|AAW47276.1| ribosomal protein S4 [Platanus occidentalis]
Length = 320
Score = 157 bits (396), Expect = 2e-36
Identities = 79/89 (88%), Positives = 81/89 (91%)
Frame = -1
Query: 268 ENLNSYIQLQTTRKLSLFYGDLPITEMHRRTERTSYIPFLLNLETRLDVILVRLHFRDTI 89
ENLNSYIQ QTTRKL LF+GDLPITEMHR TERTSYIPF LN ETR DVI VRLHFR+TI
Sbjct: 44 ENLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETRSDVIPVRLHFRETI 103
Query: 88 PQARQLISHRRVCVNNGMVSITHLKVSHG 2
PQARQ ISHRRVCVNNGMVSITHLKVSHG
Sbjct: 104 PQARQPISHRRVCVNNGMVSITHLKVSHG 132
>ref|YP_004237282.1| ribosomal protein S4 (mitochondrion) [Ricinus communis]
gi|322394289|gb|ADW96046.1| ribosomal protein S4
(mitochondrion) [Ricinus communis]
Length = 352
Score = 156 bits (395), Expect = 2e-36
Identities = 79/89 (88%), Positives = 81/89 (91%)
Frame = -1
Query: 268 ENLNSYIQLQTTRKLSLFYGDLPITEMHRRTERTSYIPFLLNLETRLDVILVRLHFRDTI 89
ENLNSYIQ QTTRKL LF+GDLPITEMHR TERTSYIPFLLN ETR DVI VRLHF +TI
Sbjct: 51 ENLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFLLNPETRSDVIPVRLHFCETI 110
Query: 88 PQARQLISHRRVCVNNGMVSITHLKVSHG 2
PQARQ ISHRRVCVNNGMVSITHLKVSHG
Sbjct: 111 PQARQPISHRRVCVNNGMVSITHLKVSHG 139
>gb|AGK25085.1| ribosomal protein S4, partial (mitochondrion) [Magnolia stellata]
Length = 347
Score = 155 bits (392), Expect = 5e-36
Identities = 78/89 (87%), Positives = 81/89 (91%)
Frame = -1
Query: 268 ENLNSYIQLQTTRKLSLFYGDLPITEMHRRTERTSYIPFLLNLETRLDVILVRLHFRDTI 89
ENLNSYI+ QTTRKL LF+GDLPITEMHR TERTSYIPF LN ETR DVI VRLHFR+TI
Sbjct: 47 ENLNSYIKSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETRSDVIPVRLHFRETI 106
Query: 88 PQARQLISHRRVCVNNGMVSITHLKVSHG 2
PQARQ ISHRRVCVNNGMVSITHLKVSHG
Sbjct: 107 PQARQPISHRRVCVNNGMVSITHLKVSHG 135
>ref|YP_007905731.1| ribosomal protein S4 (mitochondrion) [Liriodendron tulipifera]
gi|480541936|gb|AGJ90429.1| ribosomal protein S4
(mitochondrion) [Liriodendron tulipifera]
Length = 356
Score = 155 bits (392), Expect = 5e-36
Identities = 78/89 (87%), Positives = 81/89 (91%)
Frame = -1
Query: 268 ENLNSYIQLQTTRKLSLFYGDLPITEMHRRTERTSYIPFLLNLETRLDVILVRLHFRDTI 89
ENLNSYI+ QTTRKL LF+GDLPITEMHR TERTSYIPF LN ETR DVI VRLHFR+TI
Sbjct: 51 ENLNSYIKSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETRSDVIPVRLHFRETI 110
Query: 88 PQARQLISHRRVCVNNGMVSITHLKVSHG 2
PQARQ ISHRRVCVNNGMVSITHLKVSHG
Sbjct: 111 PQARQPISHRRVCVNNGMVSITHLKVSHG 139
>gb|AAW47273.1| ribosomal protein S4 [Liriodendron tulipifera]
Length = 320
Score = 155 bits (392), Expect = 5e-36
Identities = 78/89 (87%), Positives = 81/89 (91%)
Frame = -1
Query: 268 ENLNSYIQLQTTRKLSLFYGDLPITEMHRRTERTSYIPFLLNLETRLDVILVRLHFRDTI 89
ENLNSYI+ QTTRKL LF+GDLPITEMHR TERTSYIPF LN ETR DVI VRLHFR+TI
Sbjct: 40 ENLNSYIKSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETRSDVIPVRLHFRETI 99
Query: 88 PQARQLISHRRVCVNNGMVSITHLKVSHG 2
PQARQ ISHRRVCVNNGMVSITHLKVSHG
Sbjct: 100 PQARQPISHRRVCVNNGMVSITHLKVSHG 128
>gb|AAW47278.1| ribosomal protein S4 [Lonicera sp. Bergthorsson 0301]
Length = 318
Score = 155 bits (392), Expect = 5e-36
Identities = 78/89 (87%), Positives = 80/89 (89%)
Frame = -1
Query: 268 ENLNSYIQLQTTRKLSLFYGDLPITEMHRRTERTSYIPFLLNLETRLDVILVRLHFRDTI 89
ENLNSYIQ QTTRKL LF+GDLPITEMHR TERTSYIPF LN ETR DVI VRLHFR+TI
Sbjct: 39 ENLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETRSDVIPVRLHFRETI 98
Query: 88 PQARQLISHRRVCVNNGMVSITHLKVSHG 2
PQARQ ISHRRVCVNNGMVSITH KVSHG
Sbjct: 99 PQARQPISHRRVCVNNGMVSITHFKVSHG 127
>gb|AAM18533.1|AF375592_1 ribosomal protein S4 [Magnolia x soulangeana]
Length = 352
Score = 155 bits (392), Expect = 5e-36
Identities = 78/89 (87%), Positives = 81/89 (91%)
Frame = -1
Query: 268 ENLNSYIQLQTTRKLSLFYGDLPITEMHRRTERTSYIPFLLNLETRLDVILVRLHFRDTI 89
ENLNSYI+ QTTRKL LF+GDLPITEMHR TERTSYIPF LN ETR DVI VRLHFR+TI
Sbjct: 47 ENLNSYIKSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETRSDVIPVRLHFRETI 106
Query: 88 PQARQLISHRRVCVNNGMVSITHLKVSHG 2
PQARQ ISHRRVCVNNGMVSITHLKVSHG
Sbjct: 107 PQARQPISHRRVCVNNGMVSITHLKVSHG 135