BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00029384
         (944 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAZ03868.1| RNA polymerase alpha chain [Ranunculus macranthus]     503   e-140
ref|YP_001004218.1| RNA polymerase alpha subunit [Ranunculus mac...   503   e-140
ref|YP_002836122.1| RNA polymerase alpha subunit [Megaleranthis ...   501   e-139
ref|YP_740682.1| RNA polymerase alpha subunit [Nandina domestica...   501   e-139
gb|ADD31223.1| RNA polymerase alpha subunit protein [Berberidops...   499   e-139
ref|YP_004564135.1| RNA polymerase alpha subunit [Nelumbo nucife...   498   e-138
ref|YP_319795.1| RNA polymerase alpha subunit [Acorus calamus] g...   496   e-138
sp|Q5QA74.1|RPOA_ACOGR RecName: Full=DNA-directed RNA polymerase...   496   e-138
ref|YP_004563899.1| RNA polymerase alpha subunit [Nelumbo lutea]...   496   e-138
gb|ADD31229.1| RNA polymerase alpha subunit protein [Heuchera sa...   496   e-138
ref|YP_008993896.1| RNA polymerase alpha subunit (chloroplast) [...   494   e-137
gb|AEX98283.1| RNA polymerase alpha subunit (chloroplast) [Magno...   492   e-136
ref|YP_006576146.1| RpoA (chloroplast) [Magnolia denudata] gi|57...   492   e-136
gb|ADD31217.1| RNA polymerase alpha subunit protein [Meliosma af...   491   e-136
ref|YP_008993466.1| RNA polymerase alpha subunit (chloroplast) [...   491   e-136
gb|ADM92734.1| RNA polymerase alpha subunit protein [Davidia inv...   491   e-136
ref|YP_007474402.1| RNA polymerase alpha subunit (chloroplast) [...   490   e-136
gb|ADD31212.1| RNA polymerase alpha subunit protein [Aucuba japo...   489   e-136
ref|YP_008993724.1| RNA polymerase alpha subunit (chloroplast) [...   488   e-135
ref|YP_008993810.1| RNA polymerase alpha subunit (chloroplast) [...   488   e-135

>gb|AAZ03868.1| RNA polymerase alpha chain [Ranunculus macranthus]
          Length = 339

 Score =  503 bits (1296), Expect = e-140
 Identities = 252/282 (89%), Positives = 261/282 (92%), Gaps = 1/282 (0%)
 Frame = +1

Query: 100 MLREEVEISIRTLQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAIRRALLGEIEGT 279
           MLR+EV +S RTLQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIA+RRALLGEIEGT
Sbjct: 1   MLRDEVAVSARTLQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60

Query: 280 CITRVKSEKIPHEYSTIVGIEESVHEILMNLKEIVLRSNLYGTCDASLCVKGPRCVTAQD 459
           CITR KSEKIPHEYSTIVGIEESVHEILMNLKEIVLRSNLYGT DAS+CVKGP  VTAQD
Sbjct: 61  CITRAKSEKIPHEYSTIVGIEESVHEILMNLKEIVLRSNLYGTRDASICVKGPGYVTAQD 120

Query: 460 IISPPSVEIVDTTQHIASLTEPIDFCIGLQIERNRGYRTKTPNNAQNGSYPIDAVFMPVR 639
           IISPPSVEIVDTTQHIASLTEP+DFCIGLQIE NRGYR KTPNNAQ GSYPIDAVFMPVR
Sbjct: 121 IISPPSVEIVDTTQHIASLTEPVDFCIGLQIESNRGYRMKTPNNAQKGSYPIDAVFMPVR 180

Query: 640 NANYSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEQDINFE 819
           NAN+SIHSYGNGNE QEILFLEIWTNGSLTPKEAL+EASRNLIDLFIPFLHAEEQD N +
Sbjct: 181 NANHSIHSYGNGNENQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEQDQNLK 240

Query: 820 DNQKKATLTP-FTFHDGLAKLRKNKKEIALKCIFIDQSELPS 942
           DNQK     P FTFHDG  KL+KNKKEI LKCIFIDQSELPS
Sbjct: 241 DNQKNGVTLPFFTFHDGFDKLKKNKKEIELKCIFIDQSELPS 282


>ref|YP_001004218.1| RNA polymerase alpha subunit [Ranunculus macranthus]
           gi|158514028|sp|A1XGS0.1|RPOA_RANMC RecName:
           Full=DNA-directed RNA polymerase subunit alpha;
           Short=PEP; AltName: Full=Plastid-encoded RNA polymerase
           subunit alpha; Short=RNA polymerase subunit alpha
           gi|85540836|gb|ABC70788.1| RNA polymerase alpha subunit
           [Ranunculus macranthus]
          Length = 346

 Score =  503 bits (1296), Expect = e-140
 Identities = 252/282 (89%), Positives = 261/282 (92%), Gaps = 1/282 (0%)
 Frame = +1

Query: 100 MLREEVEISIRTLQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAIRRALLGEIEGT 279
           MLR+EV +S RTLQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIA+RRALLGEIEGT
Sbjct: 1   MLRDEVAVSARTLQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60

Query: 280 CITRVKSEKIPHEYSTIVGIEESVHEILMNLKEIVLRSNLYGTCDASLCVKGPRCVTAQD 459
           CITR KSEKIPHEYSTIVGIEESVHEILMNLKEIVLRSNLYGT DAS+CVKGP  VTAQD
Sbjct: 61  CITRAKSEKIPHEYSTIVGIEESVHEILMNLKEIVLRSNLYGTRDASICVKGPGYVTAQD 120

Query: 460 IISPPSVEIVDTTQHIASLTEPIDFCIGLQIERNRGYRTKTPNNAQNGSYPIDAVFMPVR 639
           IISPPSVEIVDTTQHIASLTEP+DFCIGLQIE NRGYR KTPNNAQ GSYPIDAVFMPVR
Sbjct: 121 IISPPSVEIVDTTQHIASLTEPVDFCIGLQIESNRGYRMKTPNNAQKGSYPIDAVFMPVR 180

Query: 640 NANYSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEQDINFE 819
           NAN+SIHSYGNGNE QEILFLEIWTNGSLTPKEAL+EASRNLIDLFIPFLHAEEQD N +
Sbjct: 181 NANHSIHSYGNGNENQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEQDQNLK 240

Query: 820 DNQKKATLTP-FTFHDGLAKLRKNKKEIALKCIFIDQSELPS 942
           DNQK     P FTFHDG  KL+KNKKEI LKCIFIDQSELPS
Sbjct: 241 DNQKNGVTLPFFTFHDGFDKLKKNKKEIELKCIFIDQSELPS 282


>ref|YP_002836122.1| RNA polymerase alpha subunit [Megaleranthis saniculifolia]
           gi|226933914|gb|ACO92047.1| RNA polymerase alpha subunit
           [Megaleranthis saniculifolia]
          Length = 328

 Score =  501 bits (1290), Expect = e-139
 Identities = 252/281 (89%), Positives = 260/281 (92%)
 Frame = +1

Query: 100 MLREEVEISIRTLQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAIRRALLGEIEGT 279
           MLREEV +S RTLQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIA+RRALLGEIEGT
Sbjct: 1   MLREEVAVSTRTLQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60

Query: 280 CITRVKSEKIPHEYSTIVGIEESVHEILMNLKEIVLRSNLYGTCDASLCVKGPRCVTAQD 459
           CITR KSEKIPHEYSTIVGIEESVHEILMNLKEIVLRSNLYGT DAS+CVKGP  VTAQD
Sbjct: 61  CITRAKSEKIPHEYSTIVGIEESVHEILMNLKEIVLRSNLYGTRDASICVKGPGYVTAQD 120

Query: 460 IISPPSVEIVDTTQHIASLTEPIDFCIGLQIERNRGYRTKTPNNAQNGSYPIDAVFMPVR 639
           IISPPSVEIVD TQHIASLTEPID CI LQIERNRGYR KTPNNAQ  SYPIDAVFMPVR
Sbjct: 121 IISPPSVEIVDITQHIASLTEPIDLCIELQIERNRGYRMKTPNNAQERSYPIDAVFMPVR 180

Query: 640 NANYSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEQDINFE 819
           NAN+SIHSYGNGNEKQEILFLEIWT+GSLTPKEAL+EASRNLIDLFIPFLHAEEQD   E
Sbjct: 181 NANHSIHSYGNGNEKQEILFLEIWTDGSLTPKEALYEASRNLIDLFIPFLHAEEQDTKLE 240

Query: 820 DNQKKATLTPFTFHDGLAKLRKNKKEIALKCIFIDQSELPS 942
           DNQ + TL  FTFHDGL K+RKNKKEI LKCIFIDQSELPS
Sbjct: 241 DNQSRVTLPFFTFHDGLDKVRKNKKEIELKCIFIDQSELPS 281


>ref|YP_740682.1| RNA polymerase alpha subunit [Nandina domestica]
           gi|122165930|sp|Q09FS9.1|RPOA_NANDO RecName:
           Full=DNA-directed RNA polymerase subunit alpha;
           Short=PEP; AltName: Full=Plastid-encoded RNA polymerase
           subunit alpha; Short=RNA polymerase subunit alpha
           gi|114054503|gb|ABI49896.1| RNA polymerase alpha subunit
           [Nandina domestica]
          Length = 338

 Score =  501 bits (1290), Expect = e-139
 Identities = 251/281 (89%), Positives = 261/281 (92%)
 Frame = +1

Query: 100 MLREEVEISIRTLQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAIRRALLGEIEGT 279
           MLREEV +S RTLQW+CVESR DSKRLYYGRF+LSPLMKGQADTIGIA+RRALLGEIEGT
Sbjct: 1   MLREEVAVSTRTLQWRCVESRTDSKRLYYGRFVLSPLMKGQADTIGIAMRRALLGEIEGT 60

Query: 280 CITRVKSEKIPHEYSTIVGIEESVHEILMNLKEIVLRSNLYGTCDASLCVKGPRCVTAQD 459
           CIT  KSEKIPHEYSTIVGIEESVHEILMNLKEIVLRSNLYGTCDAS+CVKGP  +TA+D
Sbjct: 61  CITHAKSEKIPHEYSTIVGIEESVHEILMNLKEIVLRSNLYGTCDASICVKGPINITAKD 120

Query: 460 IISPPSVEIVDTTQHIASLTEPIDFCIGLQIERNRGYRTKTPNNAQNGSYPIDAVFMPVR 639
           IISPPSVEIVDTTQHIASLTEP D CIGLQIERNRGYR KTPN AQNGSYPIDAVFMPVR
Sbjct: 121 IISPPSVEIVDTTQHIASLTEPFDLCIGLQIERNRGYRMKTPNKAQNGSYPIDAVFMPVR 180

Query: 640 NANYSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEQDINFE 819
           NAN+SIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEQDI  E
Sbjct: 181 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEQDIILE 240

Query: 820 DNQKKATLTPFTFHDGLAKLRKNKKEIALKCIFIDQSELPS 942
           DNQ + TL  FTFHDGLAKL+K K EIALK IFIDQSELPS
Sbjct: 241 DNQNRVTLPFFTFHDGLAKLKK-KNEIALKFIFIDQSELPS 280


>gb|ADD31223.1| RNA polymerase alpha subunit protein [Berberidopsis corallina]
          Length = 337

 Score =  499 bits (1286), Expect = e-139
 Identities = 249/280 (88%), Positives = 262/280 (93%)
 Frame = +1

Query: 100 MLREEVEISIRTLQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAIRRALLGEIEGT 279
           M+RE+V +S RTLQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIA+RRALLGEIEGT
Sbjct: 1   MVREKVTVSTRTLQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60

Query: 280 CITRVKSEKIPHEYSTIVGIEESVHEILMNLKEIVLRSNLYGTCDASLCVKGPRCVTAQD 459
           CITR KSEKIPHEYSTIVGI+ESVHEILMNLKEIVLRSNLYGTCDAS+CV+GP  VTAQD
Sbjct: 61  CITRAKSEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTCDASICVRGPGYVTAQD 120

Query: 460 IISPPSVEIVDTTQHIASLTEPIDFCIGLQIERNRGYRTKTPNNAQNGSYPIDAVFMPVR 639
           IISPPSVEIVD TQHIASLTEPID CIGLQIERNRGYR KT NN Q+GSYPIDAVFMPVR
Sbjct: 121 IISPPSVEIVDNTQHIASLTEPIDLCIGLQIERNRGYRIKTLNNFQDGSYPIDAVFMPVR 180

Query: 640 NANYSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEQDINFE 819
           NAN+SIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEE++++ E
Sbjct: 181 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEENLHLE 240

Query: 820 DNQKKATLTPFTFHDGLAKLRKNKKEIALKCIFIDQSELP 939
           DNQ KAT   FTFHD LAKLRKNKKEIALK IFIDQ ELP
Sbjct: 241 DNQHKATFPLFTFHDRLAKLRKNKKEIALKYIFIDQLELP 280


>ref|YP_004564135.1| RNA polymerase alpha subunit [Nelumbo nucifera]
           gi|224474255|gb|ACN49441.1| RNA polymerase alpha subunit
           [Nelumbo nucifera] gi|290489668|gb|ADD31218.1| RNA
           polymerase alpha subunit protein [Nelumbo nucifera]
           gi|383286829|gb|AFH01479.1| RNA polymerase alpha subunit
           (chloroplast) [Nelumbo nucifera]
           gi|519666943|gb|AGO98555.1| RNA polymerase alpha subunit
           (chloroplast) [Nelumbo nucifera]
          Length = 339

 Score =  498 bits (1282), Expect = e-138
 Identities = 250/282 (88%), Positives = 261/282 (92%), Gaps = 2/282 (0%)
 Frame = +1

Query: 100 MLREEVEISIRTLQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAIRRALLGEIEGT 279
           M+REE+ +S RTLQWKCVESR DSKRLYYGRFILSPLMKGQADTIGIA+RRALLGEIEGT
Sbjct: 1   MVREEIAVSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60

Query: 280 CITRVKSEKIPHEYSTIVGIEESVHEILMNLKEIVLRSNLYGTCDASLCVKGPRCVTAQD 459
           CITR KSEKIPHEYSTIVGIEESVHEILMNLKEIVLRSNLYGT DA +CV+GP  VTAQD
Sbjct: 61  CITRAKSEKIPHEYSTIVGIEESVHEILMNLKEIVLRSNLYGTRDAFICVRGPGYVTAQD 120

Query: 460 IISPPSVEIVDTTQHIASLTEPIDFCIGLQIERNRGYRTKTPNNAQNGSYPIDAVFMPVR 639
           IISPPSVEIVDTTQHIASLTEPID CIGLQIERNRGYR KTPNN+Q+GSYPIDAVFMPVR
Sbjct: 121 IISPPSVEIVDTTQHIASLTEPIDLCIGLQIERNRGYRMKTPNNSQDGSYPIDAVFMPVR 180

Query: 640 NANYSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEQDINFE 819
           NAN+SIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFL A+E+DI  E
Sbjct: 181 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLDAQEEDIQLE 240

Query: 820 DNQKKATLTPFTFHDGLAKLRKNK--KEIALKCIFIDQSELP 939
           DNQ K TL  FTFHD L KLRKNK  KEIALKCIFIDQSELP
Sbjct: 241 DNQNKVTLPFFTFHDRLTKLRKNKKEKEIALKCIFIDQSELP 282


>ref|YP_319795.1| RNA polymerase alpha subunit [Acorus calamus]
           gi|161622341|ref|YP_001586213.1| RNA polymerase alpha
           subunit [Acorus americanus]
           gi|90101572|sp|Q3V502.1|RPOA_ACOCL RecName:
           Full=DNA-directed RNA polymerase subunit alpha;
           Short=PEP; AltName: Full=Plastid-encoded RNA polymerase
           subunit alpha; Short=RNA polymerase subunit alpha
           gi|69215818|gb|AAZ03865.1| RNA polymerase alpha chain
           [Acorus americanus] gi|74381741|emb|CAI53826.1| RNA
           polymerase alpha subunit [Acorus calamus]
           gi|160369884|gb|ABX38775.1| RNA polymerase alpha subunit
           [Acorus americanus]
          Length = 337

 Score =  496 bits (1278), Expect = e-138
 Identities = 244/280 (87%), Positives = 262/280 (93%)
 Frame = +1

Query: 100 MLREEVEISIRTLQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAIRRALLGEIEGT 279
           M+REEV  S R LQWKCVESRADSKRLYYGRFILSPL+KGQADTIGIA+RRALLGEIEGT
Sbjct: 1   MVREEVVGSTRALQWKCVESRADSKRLYYGRFILSPLLKGQADTIGIAMRRALLGEIEGT 60

Query: 280 CITRVKSEKIPHEYSTIVGIEESVHEILMNLKEIVLRSNLYGTCDASLCVKGPRCVTAQD 459
           CITR KSEK+PHEYSTI GIEESVHEILMNLKEIVLRSNLYGT DAS+CV+GPRCVTAQD
Sbjct: 61  CITRAKSEKVPHEYSTIAGIEESVHEILMNLKEIVLRSNLYGTRDASICVRGPRCVTAQD 120

Query: 460 IISPPSVEIVDTTQHIASLTEPIDFCIGLQIERNRGYRTKTPNNAQNGSYPIDAVFMPVR 639
           IISPPSVE+VDTTQHIASLTEPID CIGLQI+R+RGYR KT  N+Q+GSYPIDAV MPVR
Sbjct: 121 IISPPSVEVVDTTQHIASLTEPIDLCIGLQIQRDRGYRMKTTKNSQDGSYPIDAVSMPVR 180

Query: 640 NANYSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEQDINFE 819
           NAN+SIHSYGNGN+KQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEE+DINFE
Sbjct: 181 NANHSIHSYGNGNQKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEEDINFE 240

Query: 820 DNQKKATLTPFTFHDGLAKLRKNKKEIALKCIFIDQSELP 939
           +NQ + T+ PFTF D LA L+KNKKEIALKCIFIDQSELP
Sbjct: 241 ENQNRFTVPPFTFPDRLANLKKNKKEIALKCIFIDQSELP 280


>sp|Q5QA74.1|RPOA_ACOGR RecName: Full=DNA-directed RNA polymerase subunit alpha; Short=PEP;
           AltName: Full=Plastid-encoded RNA polymerase subunit
           alpha; Short=RNA polymerase subunit alpha
           gi|56122468|gb|AAV74359.1| RpoA [Acorus gramineus]
          Length = 337

 Score =  496 bits (1278), Expect = e-138
 Identities = 244/280 (87%), Positives = 262/280 (93%)
 Frame = +1

Query: 100 MLREEVEISIRTLQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAIRRALLGEIEGT 279
           M+REEV  S R LQWKCVESRADSKRLYYGRFILSPL+KGQADTIGIA+RRALLGEIEGT
Sbjct: 1   MVREEVVGSTRALQWKCVESRADSKRLYYGRFILSPLLKGQADTIGIAMRRALLGEIEGT 60

Query: 280 CITRVKSEKIPHEYSTIVGIEESVHEILMNLKEIVLRSNLYGTCDASLCVKGPRCVTAQD 459
           CITR KSEK+PHEYSTI GIEESVHEILMNLKEIVLRSNLYGT DAS+CV+GPRCVTAQD
Sbjct: 61  CITRAKSEKVPHEYSTIAGIEESVHEILMNLKEIVLRSNLYGTRDASICVRGPRCVTAQD 120

Query: 460 IISPPSVEIVDTTQHIASLTEPIDFCIGLQIERNRGYRTKTPNNAQNGSYPIDAVFMPVR 639
           IISPPSVE+VDTTQHIASLTEPID CIGLQI+R+RGYR KT  N+Q+GSYPIDAV MPVR
Sbjct: 121 IISPPSVEVVDTTQHIASLTEPIDLCIGLQIQRDRGYRMKTTKNSQDGSYPIDAVSMPVR 180

Query: 640 NANYSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEQDINFE 819
           NAN+SIHSYGNGN+KQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEE+DINFE
Sbjct: 181 NANHSIHSYGNGNQKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEEDINFE 240

Query: 820 DNQKKATLTPFTFHDGLAKLRKNKKEIALKCIFIDQSELP 939
           +NQ + T+ PFTF D LA L+KNKKEIALKCIFIDQSELP
Sbjct: 241 ENQNRFTVPPFTFPDRLANLKKNKKEIALKCIFIDQSELP 280


>ref|YP_004563899.1| RNA polymerase alpha subunit [Nelumbo lutea]
           gi|224474167|gb|ACN49356.1| RNA polymerase alpha subunit
           [Nelumbo lutea] gi|383286921|gb|AFH01570.1| RNA
           polymerase alpha subunit (chloroplast) [Nelumbo lutea]
          Length = 339

 Score =  496 bits (1277), Expect = e-138
 Identities = 249/282 (88%), Positives = 261/282 (92%), Gaps = 2/282 (0%)
 Frame = +1

Query: 100 MLREEVEISIRTLQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAIRRALLGEIEGT 279
           M+REE+ +S RTLQWKCVESR DSKRLYYGRFILSPLMKGQADTIGIA+RRALLGEIEGT
Sbjct: 1   MVREEIAVSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60

Query: 280 CITRVKSEKIPHEYSTIVGIEESVHEILMNLKEIVLRSNLYGTCDASLCVKGPRCVTAQD 459
           CITR KSEKIPHEYSTIVGIEESVHEILMNLKEIVLRSNLYGT DA +CV+GP  VTAQD
Sbjct: 61  CITRAKSEKIPHEYSTIVGIEESVHEILMNLKEIVLRSNLYGTRDAFICVRGPGYVTAQD 120

Query: 460 IISPPSVEIVDTTQHIASLTEPIDFCIGLQIERNRGYRTKTPNNAQNGSYPIDAVFMPVR 639
           IISPPSVEIVDTTQHIASLTEPID CIGLQIERNRGYR KTPNN+Q+GSYPIDAVFMPVR
Sbjct: 121 IISPPSVEIVDTTQHIASLTEPIDLCIGLQIERNRGYRMKTPNNSQDGSYPIDAVFMPVR 180

Query: 640 NANYSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEQDINFE 819
           NAN+SIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLI+LFIPFL A+E+DI  E
Sbjct: 181 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLINLFIPFLDAQEEDIQLE 240

Query: 820 DNQKKATLTPFTFHDGLAKLRKNK--KEIALKCIFIDQSELP 939
           DNQ K TL  FTFHD L KLRKNK  KEIALKCIFIDQSELP
Sbjct: 241 DNQNKVTLPFFTFHDRLTKLRKNKKEKEIALKCIFIDQSELP 282


>gb|ADD31229.1| RNA polymerase alpha subunit protein [Heuchera sanguinea]
          Length = 337

 Score =  496 bits (1276), Expect = e-138
 Identities = 246/280 (87%), Positives = 262/280 (93%)
 Frame = +1

Query: 100 MLREEVEISIRTLQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAIRRALLGEIEGT 279
           M+RE+V +S RTL+WKCVESRADSKRLYYGRFILSPLMKGQADTIGIA+RRALLGEIEGT
Sbjct: 1   MVREKVTVSTRTLEWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60

Query: 280 CITRVKSEKIPHEYSTIVGIEESVHEILMNLKEIVLRSNLYGTCDASLCVKGPRCVTAQD 459
           CITR KSEKIPHEYSTIVGI+ESVHEILMNLKE+VLRSNLYGT +AS+CV GP  VTAQD
Sbjct: 61  CITRAKSEKIPHEYSTIVGIQESVHEILMNLKEVVLRSNLYGTRNASICVSGPGYVTAQD 120

Query: 460 IISPPSVEIVDTTQHIASLTEPIDFCIGLQIERNRGYRTKTPNNAQNGSYPIDAVFMPVR 639
           IISPPSVEIVD TQHIASLTEPID CIGLQIE+NRGYR KTPNN Q+GSYPIDAVFMPVR
Sbjct: 121 IISPPSVEIVDNTQHIASLTEPIDLCIGLQIEKNRGYRIKTPNNFQDGSYPIDAVFMPVR 180

Query: 640 NANYSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEQDINFE 819
           NAN+SIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEE++++ E
Sbjct: 181 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEENLHLE 240

Query: 820 DNQKKATLTPFTFHDGLAKLRKNKKEIALKCIFIDQSELP 939
           DNQ K TL  FTFHD LAKLRKNKKEIALK IFIDQSELP
Sbjct: 241 DNQHKVTLPLFTFHDRLAKLRKNKKEIALKYIFIDQSELP 280


>ref|YP_008993896.1| RNA polymerase alpha subunit (chloroplast) [Magnolia sprengeri]
          Length = 337

 Score =  494 bits (1273), Expect = e-137
 Identities = 245/280 (87%), Positives = 259/280 (92%)
 Frame = +1

Query: 100 MLREEVEISIRTLQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAIRRALLGEIEGT 279
           M+REEV +S RTLQWKCVESR DSKRLYYGRFIL+PLMKGQADTIGIA+RRALLGEIEGT
Sbjct: 1   MVREEVAVSTRTLQWKCVESRTDSKRLYYGRFILAPLMKGQADTIGIAMRRALLGEIEGT 60

Query: 280 CITRVKSEKIPHEYSTIVGIEESVHEILMNLKEIVLRSNLYGTCDASLCVKGPRCVTAQD 459
           CITR KSEK+PHEYSTIVGIEESVH ILMNLKEIVLRS+LYGT DAS+CV+GPR VTAQD
Sbjct: 61  CITRAKSEKVPHEYSTIVGIEESVHAILMNLKEIVLRSHLYGTRDASICVRGPRYVTAQD 120

Query: 460 IISPPSVEIVDTTQHIASLTEPIDFCIGLQIERNRGYRTKTPNNAQNGSYPIDAVFMPVR 639
           II PPSVEIVDTTQHIASLTEPID CI LQIER+RGYR KTPNN Q+GSYPIDAV MPVR
Sbjct: 121 IIPPPSVEIVDTTQHIASLTEPIDLCIELQIERDRGYRMKTPNNYQDGSYPIDAVSMPVR 180

Query: 640 NANYSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEQDINFE 819
           NAN+SIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEQDIN E
Sbjct: 181 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEQDINLE 240

Query: 820 DNQKKATLTPFTFHDGLAKLRKNKKEIALKCIFIDQSELP 939
           DN  + T+ PFTFHD LA +RKNKK IALKCIFIDQSELP
Sbjct: 241 DNPNRFTVPPFTFHDRLANIRKNKKGIALKCIFIDQSELP 280


>gb|AEX98283.1| RNA polymerase alpha subunit (chloroplast) [Magnolia liliiflora]
          Length = 337

 Score =  492 bits (1266), Expect = e-136
 Identities = 244/280 (87%), Positives = 258/280 (92%)
 Frame = +1

Query: 100 MLREEVEISIRTLQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAIRRALLGEIEGT 279
           M+REEV +S RTLQWKCVESR DSKRLYYGRFIL+PLMKGQADTIGIA+RRALLGEIEGT
Sbjct: 1   MVREEVAVSTRTLQWKCVESRTDSKRLYYGRFILAPLMKGQADTIGIAMRRALLGEIEGT 60

Query: 280 CITRVKSEKIPHEYSTIVGIEESVHEILMNLKEIVLRSNLYGTCDASLCVKGPRCVTAQD 459
           CITR KSEK+PHEYSTIVGIEESVH ILMNLKEIVLRS+LYGT DAS+CV+GPR VTAQD
Sbjct: 61  CITRAKSEKVPHEYSTIVGIEESVHAILMNLKEIVLRSHLYGTRDASICVRGPRYVTAQD 120

Query: 460 IISPPSVEIVDTTQHIASLTEPIDFCIGLQIERNRGYRTKTPNNAQNGSYPIDAVFMPVR 639
           II PPSVEIVDTTQHIASLTEPID CI LQIER+RGYR KTPNN Q+GSYPIDAV MPVR
Sbjct: 121 IIPPPSVEIVDTTQHIASLTEPIDLCIELQIERDRGYRMKTPNNYQDGSYPIDAVSMPVR 180

Query: 640 NANYSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEQDINFE 819
           NAN+SIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEQD N E
Sbjct: 181 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEQDRNLE 240

Query: 820 DNQKKATLTPFTFHDGLAKLRKNKKEIALKCIFIDQSELP 939
           DN  + T+ PFTFHD LA +RKNKK IALKCIFIDQSELP
Sbjct: 241 DNPNRFTVPPFTFHDRLANIRKNKKGIALKCIFIDQSELP 280


>ref|YP_006576146.1| RpoA (chloroplast) [Magnolia denudata]
           gi|570760131|ref|YP_008993552.1| RNA polymerase alpha
           subunit (chloroplast) [Magnolia liliifera]
           gi|343887570|gb|AEM65249.1| RpoA [Magnolia denudata]
           gi|372862283|gb|AEX98366.1| RNA polymerase alpha subunit
           (chloroplast) [Magnolia denudata]
          Length = 337

 Score =  492 bits (1266), Expect = e-136
 Identities = 244/280 (87%), Positives = 258/280 (92%)
 Frame = +1

Query: 100 MLREEVEISIRTLQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAIRRALLGEIEGT 279
           M+REEV +S RTLQWKCVESR DSKRLYYGRFIL+PLMKGQADTIGIA+RRALLGEIEGT
Sbjct: 1   MVREEVAVSTRTLQWKCVESRTDSKRLYYGRFILAPLMKGQADTIGIAMRRALLGEIEGT 60

Query: 280 CITRVKSEKIPHEYSTIVGIEESVHEILMNLKEIVLRSNLYGTCDASLCVKGPRCVTAQD 459
           CITR KSEK+PHEYSTIVGIEESVH ILMNLKEIVLRS+LYGT DAS+CV+GPR VTAQD
Sbjct: 61  CITRAKSEKVPHEYSTIVGIEESVHAILMNLKEIVLRSHLYGTRDASICVRGPRYVTAQD 120

Query: 460 IISPPSVEIVDTTQHIASLTEPIDFCIGLQIERNRGYRTKTPNNAQNGSYPIDAVFMPVR 639
           II PPSVEIVDTTQHIASLTEPID CI LQIER+RGYR KTPNN Q+GSYPIDAV MPVR
Sbjct: 121 IIPPPSVEIVDTTQHIASLTEPIDLCIELQIERDRGYRMKTPNNYQDGSYPIDAVSMPVR 180

Query: 640 NANYSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEQDINFE 819
           NAN+SIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEQD N E
Sbjct: 181 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEQDRNLE 240

Query: 820 DNQKKATLTPFTFHDGLAKLRKNKKEIALKCIFIDQSELP 939
           DN  + T+ PFTFHD LA +RKNKK IALKCIFIDQSELP
Sbjct: 241 DNPNRFTVPPFTFHDRLANIRKNKKGIALKCIFIDQSELP 280


>gb|ADD31217.1| RNA polymerase alpha subunit protein [Meliosma aff. cuneifolia
           Moore 333]
          Length = 337

 Score =  491 bits (1264), Expect = e-136
 Identities = 246/280 (87%), Positives = 259/280 (92%)
 Frame = +1

Query: 100 MLREEVEISIRTLQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAIRRALLGEIEGT 279
           M+REEV +S RTLQWKCVESRADSKRLYYGRFI+SPLMKGQADTIGIA+RRALLGEIEGT
Sbjct: 1   MVREEVAVSTRTLQWKCVESRADSKRLYYGRFIMSPLMKGQADTIGIAMRRALLGEIEGT 60

Query: 280 CITRVKSEKIPHEYSTIVGIEESVHEILMNLKEIVLRSNLYGTCDASLCVKGPRCVTAQD 459
           CITR KSE IPHEYSTIVGIEESVHEILMNLKEIVLRSNLYGT DAS+CV+GP  VTAQD
Sbjct: 61  CITRAKSETIPHEYSTIVGIEESVHEILMNLKEIVLRSNLYGTRDASICVRGPGYVTAQD 120

Query: 460 IISPPSVEIVDTTQHIASLTEPIDFCIGLQIERNRGYRTKTPNNAQNGSYPIDAVFMPVR 639
           IISP SVEIVDTTQHIASLTEPI+ CIGLQIERN GYR KTP N+Q+GSYPIDAVFMPVR
Sbjct: 121 IISPSSVEIVDTTQHIASLTEPINLCIGLQIERNHGYRMKTPKNSQDGSYPIDAVFMPVR 180

Query: 640 NANYSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEQDINFE 819
           NAN+SIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLH EE+DI  E
Sbjct: 181 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHTEEEDIIIE 240

Query: 820 DNQKKATLTPFTFHDGLAKLRKNKKEIALKCIFIDQSELP 939
           DNQ + T+  FTFHD LAKLRKNKKEIALK IFIDQSELP
Sbjct: 241 DNQNRFTVPFFTFHDRLAKLRKNKKEIALKFIFIDQSELP 280


>ref|YP_008993466.1| RNA polymerase alpha subunit (chloroplast) [Magnolia kobus]
          Length = 337

 Score =  491 bits (1263), Expect = e-136
 Identities = 244/280 (87%), Positives = 258/280 (92%)
 Frame = +1

Query: 100 MLREEVEISIRTLQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAIRRALLGEIEGT 279
           M+REEV +S RTLQWKCVESR DSKRLYYGRFIL+PLMKGQADTIGIA+RRALLGEIEGT
Sbjct: 1   MVREEVAVSTRTLQWKCVESRTDSKRLYYGRFILAPLMKGQADTIGIAMRRALLGEIEGT 60

Query: 280 CITRVKSEKIPHEYSTIVGIEESVHEILMNLKEIVLRSNLYGTCDASLCVKGPRCVTAQD 459
           CITR KSEK+PHEYSTIVGIEESVH ILMNLKEIVLRS+LYGT DAS+CV+GPR VTAQD
Sbjct: 61  CITRAKSEKVPHEYSTIVGIEESVHAILMNLKEIVLRSHLYGTRDASICVRGPRYVTAQD 120

Query: 460 IISPPSVEIVDTTQHIASLTEPIDFCIGLQIERNRGYRTKTPNNAQNGSYPIDAVFMPVR 639
           II PPSVEIVDTTQHIASLTEPID CI LQIER+RGYR KTPNN Q+GSYPIDAV MPVR
Sbjct: 121 IIPPPSVEIVDTTQHIASLTEPIDLCIELQIERDRGYRMKTPNNYQDGSYPIDAVSMPVR 180

Query: 640 NANYSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEQDINFE 819
           NAN+SIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEQDIN E
Sbjct: 181 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEQDINLE 240

Query: 820 DNQKKATLTPFTFHDGLAKLRKNKKEIALKCIFIDQSELP 939
           DNQ + T+  F FHD LA +RKNKK IALKCIFIDQSELP
Sbjct: 241 DNQNRFTVPLFPFHDRLANIRKNKKGIALKCIFIDQSELP 280


>gb|ADM92734.1| RNA polymerase alpha subunit protein [Davidia involucrata]
          Length = 328

 Score =  491 bits (1263), Expect = e-136
 Identities = 243/281 (86%), Positives = 261/281 (92%)
 Frame = +1

Query: 100 MLREEVEISIRTLQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAIRRALLGEIEGT 279
           M+RE+V +S RTLQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIA+RRALLGEIEGT
Sbjct: 1   MVREKVTVSTRTLQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60

Query: 280 CITRVKSEKIPHEYSTIVGIEESVHEILMNLKEIVLRSNLYGTCDASLCVKGPRCVTAQD 459
           CITR K E+IPHEYSTIVG +ESVHEILMNLKEIVLRSNLYGTCDAS+CVKGP  VTAQD
Sbjct: 61  CITRAKFERIPHEYSTIVGTQESVHEILMNLKEIVLRSNLYGTCDASICVKGPGYVTAQD 120

Query: 460 IISPPSVEIVDTTQHIASLTEPIDFCIGLQIERNRGYRTKTPNNAQNGSYPIDAVFMPVR 639
           IISPP VEIVD+TQ+IASLTEPID CIGLQIERNRGYR K PNN Q+GSYPIDAVFMPVR
Sbjct: 121 IISPPYVEIVDSTQYIASLTEPIDLCIGLQIERNRGYRIKMPNNFQDGSYPIDAVFMPVR 180

Query: 640 NANYSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEQDINFE 819
           NAN+SIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLH EE++++ E
Sbjct: 181 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHTEEENLHLE 240

Query: 820 DNQKKATLTPFTFHDGLAKLRKNKKEIALKCIFIDQSELPS 942
           DNQ K TL  FTFH+ LAKLRKNKK+IALK IFIDQSELP+
Sbjct: 241 DNQHKVTLPLFTFHEKLAKLRKNKKKIALKYIFIDQSELPT 281


>ref|YP_007474402.1| RNA polymerase alpha subunit (chloroplast) [Magnolia officinalis]
           gi|452848803|ref|YP_007474484.1| RNA polymerase alpha
           subunit (chloroplast) [Magnolia officinalis subsp.
           biloba] gi|619275767|ref|YP_009026913.1| RNA polymerase
           alpha subunit [Magnolia tripetala]
           gi|372862453|gb|AEX98534.1| RNA polymerase alpha subunit
           (chloroplast) [Magnolia officinalis]
           gi|372862536|gb|AEX98616.1| RNA polymerase alpha subunit
           (chloroplast) [Magnolia officinalis subsp. biloba]
           gi|372862621|gb|AEX98700.1| RNA polymerase alpha subunit
           (chloroplast) [Magnolia officinalis subsp. biloba]
           gi|372862706|gb|AEX98784.1| RNA polymerase alpha subunit
           (chloroplast) [Magnolia officinalis subsp. biloba]
           gi|608608435|gb|AHW51989.1| RNA polymerase alpha subunit
           [Magnolia tripetala]
          Length = 337

 Score =  490 bits (1262), Expect = e-136
 Identities = 244/280 (87%), Positives = 258/280 (92%)
 Frame = +1

Query: 100 MLREEVEISIRTLQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAIRRALLGEIEGT 279
           M+REEV +S RTLQWKCVESR DSKRLYYGRFIL+PLMKGQADTIGIA+RRALLGEIEGT
Sbjct: 1   MVREEVAVSTRTLQWKCVESRTDSKRLYYGRFILAPLMKGQADTIGIAMRRALLGEIEGT 60

Query: 280 CITRVKSEKIPHEYSTIVGIEESVHEILMNLKEIVLRSNLYGTCDASLCVKGPRCVTAQD 459
           CITR KSEK+PHEYSTIVGIEESVH ILMNLKEIVLRS+LYGT DAS+CV+GPR VTAQD
Sbjct: 61  CITRAKSEKVPHEYSTIVGIEESVHAILMNLKEIVLRSHLYGTRDASICVRGPRYVTAQD 120

Query: 460 IISPPSVEIVDTTQHIASLTEPIDFCIGLQIERNRGYRTKTPNNAQNGSYPIDAVFMPVR 639
           II PPSVEIVDTTQHIASLTEPID CI LQIER+RGYR KTPNN Q+GSYPIDAV MPVR
Sbjct: 121 IIPPPSVEIVDTTQHIASLTEPIDLCIELQIERDRGYRMKTPNNYQDGSYPIDAVSMPVR 180

Query: 640 NANYSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEQDINFE 819
           NAN+SIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEQDIN E
Sbjct: 181 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEQDINLE 240

Query: 820 DNQKKATLTPFTFHDGLAKLRKNKKEIALKCIFIDQSELP 939
           DN  + T+  FTFHD LA +RKNKK IALKCIFIDQSELP
Sbjct: 241 DNPNRFTVPFFTFHDRLANIRKNKKGIALKCIFIDQSELP 280


>gb|ADD31212.1| RNA polymerase alpha subunit protein [Aucuba japonica]
          Length = 349

 Score =  489 bits (1258), Expect = e-136
 Identities = 240/280 (85%), Positives = 256/280 (91%)
 Frame = +1

Query: 100 MLREEVEISIRTLQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAIRRALLGEIEGT 279
           M+RE+V +S RTLQWKCVESRADSKRLYYGRFILSPLMK QADTIGIA+RRALLGEIEGT
Sbjct: 1   MVREKVTVSTRTLQWKCVESRADSKRLYYGRFILSPLMKSQADTIGIAMRRALLGEIEGT 60

Query: 280 CITRVKSEKIPHEYSTIVGIEESVHEILMNLKEIVLRSNLYGTCDASLCVKGPRCVTAQD 459
           CITR KSEKIPHEYSTIVGI+ES+HEILMNLKEIVLRSNLYGTCD S+CV+GP  +TAQD
Sbjct: 61  CITRAKSEKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTCDTSICVRGPGYITAQD 120

Query: 460 IISPPSVEIVDTTQHIASLTEPIDFCIGLQIERNRGYRTKTPNNAQNGSYPIDAVFMPVR 639
           II PP VEIVD TQHIASLTEPID CIGLQIERNRGY  KTPNN Q+GSYPIDAVFMPVR
Sbjct: 121 IILPPYVEIVDKTQHIASLTEPIDLCIGLQIERNRGYLIKTPNNFQDGSYPIDAVFMPVR 180

Query: 640 NANYSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEQDINFE 819
           N NYSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLH EE++++ E
Sbjct: 181 NVNYSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHMEEENLHLE 240

Query: 820 DNQKKATLTPFTFHDGLAKLRKNKKEIALKCIFIDQSELP 939
           DNQ    L+PFTFHD LAKLRKNK +IALK IFIDQSELP
Sbjct: 241 DNQHTVPLSPFTFHDKLAKLRKNKNKIALKSIFIDQSELP 280


>ref|YP_008993724.1| RNA polymerase alpha subunit (chloroplast) [Magnolia salicifolia]
          Length = 337

 Score =  488 bits (1257), Expect = e-135
 Identities = 243/280 (86%), Positives = 257/280 (91%)
 Frame = +1

Query: 100 MLREEVEISIRTLQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAIRRALLGEIEGT 279
           M+REEV +S RTLQWKCVESR DSKRLYYGRFIL+PLMKGQADTIGIA+RRALLGEIEGT
Sbjct: 1   MVREEVAVSTRTLQWKCVESRTDSKRLYYGRFILAPLMKGQADTIGIAMRRALLGEIEGT 60

Query: 280 CITRVKSEKIPHEYSTIVGIEESVHEILMNLKEIVLRSNLYGTCDASLCVKGPRCVTAQD 459
           CITR KSEK+PHEYSTIVGIEESVH ILMNLKEIVLRS+LYGT DAS+CV+GPR VTAQD
Sbjct: 61  CITRAKSEKVPHEYSTIVGIEESVHAILMNLKEIVLRSHLYGTRDASICVRGPRYVTAQD 120

Query: 460 IISPPSVEIVDTTQHIASLTEPIDFCIGLQIERNRGYRTKTPNNAQNGSYPIDAVFMPVR 639
           II PPSVEIVDTTQHIASLTEPID CI LQIER+RGYR KTPNN Q+GSYPIDAV MPVR
Sbjct: 121 IIPPPSVEIVDTTQHIASLTEPIDLCIELQIERDRGYRMKTPNNYQDGSYPIDAVSMPVR 180

Query: 640 NANYSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEQDINFE 819
           NAN+SIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEQDIN E
Sbjct: 181 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEQDINLE 240

Query: 820 DNQKKATLTPFTFHDGLAKLRKNKKEIALKCIFIDQSELP 939
           DN  + T+  F FHD LA +RKNKK IALKCIFIDQSELP
Sbjct: 241 DNPNRFTVPLFPFHDRLANIRKNKKGIALKCIFIDQSELP 280


>ref|YP_008993810.1| RNA polymerase alpha subunit (chloroplast) [Magnolia sinica]
          Length = 337

 Score =  488 bits (1257), Expect = e-135
 Identities = 243/280 (86%), Positives = 258/280 (92%)
 Frame = +1

Query: 100 MLREEVEISIRTLQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAIRRALLGEIEGT 279
           M+REEV +S RTLQWKCVESR DSKRLYYGRFIL+PLMKGQADTIGIA+RRALLGEIEGT
Sbjct: 1   MVREEVAVSTRTLQWKCVESRTDSKRLYYGRFILAPLMKGQADTIGIAMRRALLGEIEGT 60

Query: 280 CITRVKSEKIPHEYSTIVGIEESVHEILMNLKEIVLRSNLYGTCDASLCVKGPRCVTAQD 459
           CITR KSEK+PHEYSTIVGIEESVH ILMNLKEIVLRS+LYGT DAS+CV+GPR VTAQD
Sbjct: 61  CITRAKSEKVPHEYSTIVGIEESVHAILMNLKEIVLRSHLYGTRDASICVRGPRYVTAQD 120

Query: 460 IISPPSVEIVDTTQHIASLTEPIDFCIGLQIERNRGYRTKTPNNAQNGSYPIDAVFMPVR 639
           II PPSVEIVDTTQHIASLTEPID CI LQIER+RGYR KTPNN Q+GSYPIDAV MPVR
Sbjct: 121 IIPPPSVEIVDTTQHIASLTEPIDLCIELQIERDRGYRMKTPNNYQDGSYPIDAVSMPVR 180

Query: 640 NANYSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEQDINFE 819
           NAN+SIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEQDI+ E
Sbjct: 181 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEQDIHLE 240

Query: 820 DNQKKATLTPFTFHDGLAKLRKNKKEIALKCIFIDQSELP 939
           DN  + T+  FTFHD LA +RKNKK IALKCIFIDQSELP
Sbjct: 241 DNPNRFTVPFFTFHDRLANIRKNKKGIALKCIFIDQSELP 280